Pregenerated sensors for CCR4 (Homo sapiens)
Ensembl gene IDs: ENSG00000183813Ensembl transcript IDs: ENST00000330953.6
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCATTCAAGCACTGCTCAGAGTTCTCATCAGACTGACTCATGCCTaGAGGCAAGCCTGGTGTGAGGAAGGATGCCTCAGCCCAGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: FIQALLRVLIRLTHA*RQAWCEEGCLSPGE Trigger: TTCACCTGGGCTGAGGCATCCTTCCTCACACCAGGCTTGCCTGCAGGCATGAGTCAGTCTGATGAGAACTCTGAGCAGTGCTTGAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR GCA 90 bp | TTTGCCACAGCAAAAGGTAGCGATTTACTCCATCAGCCAGTACTCTaGAATTCCCTCTGGAGAAACCCATCAGTTCAGGTTAGAAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: FATAKGSDLLHQPVL*NSLWRNPSVQVRRE Trigger: TTCCCTTCTAACCTGAACTGATGGGTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTTTGCTGTGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACCAGGCAAGCCTGGTGTaGGGAAGGATGCCTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNQASLV*GRMPQP Trigger: GGGCTGAGGCATCCTTCCTCACACCAGGCTTGCCTG...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGCCTGCAGGCAAGCCTaGTGTGAGGAAGGATGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNACRQA*CEEGCL Trigger: GAGGCATCCTTCCTCACACCAGGCTTGCCTGCAGGC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACAGACTGACTCATGCCTaGAGGCAAGCCTGGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNRLTHA*RQAWCE Trigger: CTCACACCAGGCTTGCCTGCAGGCATGAGTCAGTCT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACCATCAGACTGACTCATaGCTGCAGGCAAGCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNHQTDS*LQASLV Trigger: CACCAGGCTTGCCTGCAGGCATGAGTCAGTCTGATG...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACTGTAAGCCTTCCTCCTaGCACTGGCTCAGGAATCTC | + |
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Preference number: 2 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNCKPSS*HWLRNL Trigger: GAGATTCCTGAGCCAGTGTCAGGAGGAAGGCTTACA...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACTGGGAGAGAAAAAGCTaGCTGCAGGATGAGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNWERKS*LQDEKL Trigger: CAGCTTCTCATCCTGCAGGCAGCTTTTTCTCTCCCA...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCTGGTGTGAGGAAGGATaGCTCAGCCCAGGTGAACCC | + |
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Preference number: 2 (lower is better) Translates to: SILFRKSKKLIRGPICHSWCEEG*LSPGEP Trigger: GGGTTCACCTGGGCTGAGGCATCCTTCCTCACACCA...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR CCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCGAACCCTTGCCAGGCTaGACTTGTCTAGTGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SILFRKSKKLIRGPICHSEPLPG*TCLVGE Trigger: CTCTCCCACTAGACAAGTCCAGCCTGGCAAGGGTTC...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR TCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCAAGCTGCCTGCAGGATaGGAAGCTGTCTTTCCACTG | + |
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Preference number: 2 (lower is better) Translates to: SILFRKSKKLIRGPICHSKLPAG*EAVFPL Trigger: CAGTGGAAAGACAGCTTCTCATCCTGCAGGCAGCTT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACAGAGAAAAAGCTGCCTaGAGGATGAGAAGCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNREKAA*RMRSCL Trigger: AAGACAGCTTCTCATCCTGCAGGCAGCTTTTTCTCT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR CCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCCTCTGCAATTCCCTCTaGAGAAACCCATCAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SILFRKSKKLIRGPICHSLCNSL*RNPSVQ Trigger: CTGAACTGATGGGTTTCTCCAGAGGGAATTGCAGAG...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACATGTGGAAAGTTCATTaGCTCTGCATTTCACCATTT | + |
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Preference number: 2 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNMWKVH*LCISPF Trigger: AAATGGTGAAATGCAGAGTCAATGAACTTTCCACAT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGAAGGGAATAGTCTTTaGCTTGCAATATTACCTACA | + |
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Preference number: 2 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNEGNSL*LAILPT Trigger: TGTAGGTAATATTGCAAGGCAAAGACTATTCCCTTC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCACTTCATTCAAGCACTaGTCAGAGTTCTCATCAGAC | + |
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Preference number: 2 (lower is better) Translates to: SILFRKSKKLIRGPICHSTSFKH*SEFSSD Trigger: GTCTGATGAGAACTCTGAGCAGTGCTTGAATGAAGT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACAGCCCAGGTGAACCCTaGCCAGGCTGGACTTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNSPGEP*PGWTCL Trigger: TAGACAAGTCCAGCCTGGCAAGGGTTCACCTGGGCT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR GCA 72 bp | AGGCTGGACTTGTCTAGTGGGAGAGAAAAAGCTGCCTaGAGGATGAGAAGCTGTCTTTCCACTGTGGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: RLDLSSGREKAA*RMRSCLSTVGV Trigger: TACACCCACAGTGGAAAGACAGCTTCTCATCCTGCAGGCAGCTTTTTCTCTCCCACTAGACAAGTCCAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCCTTGCCAGGCTGGACTaGTCTAGTGGGAGAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: SILFRKSKKLIRGPICHSLARLD*SSGREK Trigger: TTTTTCTCTCCCACTAGACAAGTCCAGCCTGGCAAG...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACAATGTGGAAAGTTCATaGACTCTGCATTTCACCATT | + |
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Preference number: 3 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNNVESS*TLHFTI Trigger: AATGGTGAAATGCAGAGTCAATGAACTTTCCACATT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGGAATAGTCTTTGCCTaGCAATATTACCTACAACTT | + |
|
Preference number: 3 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNGIVFA*QYYLQL Trigger: AAGTTGTAGGTAATATTGCAAGGCAAAGACTATTCC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACCCGAGATCGCGCCACTaGACTCCAGACTGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNPRSRH*TPDWVT Trigger: TGTCACCCAGTCTGGAGTGCAGTGGCGCGATCTCGG...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGCTGAGGCAGGAGAATaGTGCGAACCCGTGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNAEAGE*CEPVRQ Trigger: CTGCCTCACGGGTTCGCACCATTCTCCTGCCTCAGC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGGACTGCGTGTAAGATaGGCTGGGGGTGTCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNGLRVR*AGGVSR Trigger: TCTGCTGACACCCCCAGCTCATCTTACACGCAGTCC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACTCCTCAAGGCAGGTCTaGGCCCAACCAGAAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNSSRQV*AQPEAA Trigger: AGCTGCTTCTGGTTGGGCCCAGACCTGCCTTGAGGA...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGGCGAACACAGCCACTaGCCATGTAGCCAAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNGEHSH*PCSQTG Trigger: ACCAGTTTGGCTACATGGTCAGTGGCTGTGTTCGCC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGGCAGGAGAATCGCTTaGACCTGGGAGGCAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNGRRIA*TWEADF Trigger: AAAGTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGCTCCCCAAATGCCTTaGTGCCTTCTTTGGTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNAPQMP*CLLWCK Trigger: CTTGCACCAAAGAAGGCATCAAGGCATTTGGGGAGC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACCCGAGATGGCAAGGTTaGGCAGGTACACATCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNPRWQG*AGTHQS Trigger: TGACTGATGTGTACCTGCTCAACCTTGCCATCTCGG...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACTCAAAGGTGCAGTCCTaGAGGACTTCTAGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNSKVQS*RTSSST Trigger: GGTGGAGCTAGAAGTCCTTCAGGACTGCACCTTTGA...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGGCCCCTGCAGGTTTTaGAGAGCTGTAGGATGTACT | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNGPCRF*RAVGCT Trigger: AGTACATCCTACAGCTCTTCAAAACCTGCAGGGGCC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACAAGCTGCCTGCAGGATaGGAAGCTGTCTTTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNKLPAG*EAVFPL Trigger: CAGTGGAAAGACAGCTTCTCATCCTGCAGGCAGCTT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACAGGAGCCCACAGTATTaGCAGAGCACAAAAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNRSPQY*QSTKRP Trigger: GGGCCTTTTTGTGCTCTGCCAATACTGTGGGCTCCT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACATCGAGGGTGGTGTCTaGTATATCCGTGGGGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNIEGGV*YIRGVH Trigger: ATGAACCCCACGGATATAGCAGACACCACCCTCGAT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACAAGCCAGAGTTTCTGTaGCCTGGATGGCATAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNKPEFL*PGWHSP Trigger: TGGACTATGCCATCCAGGCCACAGAAACTCTGGCTT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGCGTGTAAGATGAGCTaGGGGTGTCAGCAGAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNACKMS*GCQQSK Trigger: TTTACTCTGCTGACACCCCCAGCTCATCTTACACGC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACAGTAGCAAAACAGCATaGTCCCTAAGGGGATCACCA | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNSSKTA*SLRGSP Trigger: TGGTGATCCCCTTAGGGATCATGCTGTTTTGCTACT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACCACCGCGTGCACAATTaGCAGGTATCTATCAATGCT | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNHRVHN*QVSINA Trigger: AGCATTGATAGATACCTGGCAATTGTGCACGCGGTG...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACATAAGTCAAGGTCCTTaGCCTCAAGGAAAACACCGC | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNISQGP*PQGKHR Trigger: GCGGTGTTTTCCTTGAGGGCAAGGACCTTGACTTAT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCAGACTGACTCATGCCTaGAGGCAAGCCTGGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSRLTHA*RQAWCE Trigger: CTCACACCAGGCTTGCCTGCAGGCATGAGTCAGTCT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCCATCAGACTGACTCATaGCTGCAGGCAAGCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSHQTDS*LQASLV Trigger: CACCAGGCTTGCCTGCAGGCATGAGTCAGTCTGATG...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGGAGATCATGATCCATaGTGGACTGCGTGTAAGATG | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNGDHDP*WTACKM Trigger: CATCTTACACGCAGTCCACCATGGATCATGATCTCC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCGCATCATGGAGATCATaGTCCATGGTGGACTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSASWRS*SMVDCV Trigger: CACGCAGTCCACCATGGATCATGATCTCCATGATGC...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACTCCTTGCTAACATGGTaGAACCCCATCTCTACTGAA | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNSLLTW*NPISTE Trigger: TTCAGTAGAGATGGGGTTTCACCATGTTAGCAAGGA...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACTGCAGTAGGTATGGTTaGGCTCAGTATAACAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNCSRYG*AQYNKC Trigger: GCACTTGTTATACTGAGCGCAACCATACCTACTGCA...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGCTGTAGGATGTACTTaGGAAATTTCTCCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNAVGCT*EISPPE Trigger: TTCTGGGGGAGAAATTTCGCAAGTACATCCTACAGC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCAAAATTAGCCAGGCATaGGGGCAGGTGCCTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSKISQA*GQVPVV Trigger: GACTACAGGCACCTGCCCCCATGCCTGGCTAATTTT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCACAAGTAAAAGACCTTaGCTGGGCGAGGTGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSTSKRP*LGEVAH Trigger: GTGAGCCACCTCGCCCAGCCAAGGTCTTTTACTTGT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCTCCACGTCGTGGAGTTaGGAGAGTACTTGGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSSTSWS*ESTWFC Trigger: GCAAAACCAAGTACTCTCTCAACTCCACGACGTGGA...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCAACCCACTGGTCTGCTaGATAGTAGCCCCAAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSNPLVC*IVAPKR Trigger: CCTTTTTGGGGCTACTATGCAGCAGACCAGTGGGTT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACACTTCATTCAAGCACTaGTCAGAGTTCTCATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNTSFKH*SEFSSD Trigger: GTCTGATGAGAACTCTGAGCAGTGCTTGAATGAAGT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCTGCTTTCATCGAGGGTaGTGTCTGCTATATCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSCFHRG*CLLYPW Trigger: CCACGGATATAGCAGACACCACCCTCGATGAAAGCA...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCCAGTATAACAAGTGCTaGACAGAAAGCCAGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSQYNKC*TESQEG Trigger: CCCTTCCTGGCTTTCTGTTCAGCACTTGTTATACTG...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGCAGGCACTTCAAAATaGTTAAGGAGGTATTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNAGTSK*LRRYCH Trigger: ATGACAATACCTCCTTAATCATTTTGAAGTGCCTGC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCCAACCAGAAGCAGCTTaGTTTTCTGAAAGCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSQPEAA*FSESGS Trigger: AGAGCCGCTTTCAGAAAAGCAAGCTGCTTCTGGTTG...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
||
| CDS-3UTR GCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACAGTAATTGCTGTATATaGTTTCATCGAGGGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNSNCCI*FHRGWC Trigger: ACACCACCCTCGATGAAAGCATATACAGCAATTACT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCGAAGAGCTCCCCAAATaGCTTGATGCCTTCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSEELPK*LDAFFG Trigger: ACCAAAGAAGGCATCAAGGCATTTGGGGAGCTCTTC...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
||
| CDS-3UTR CCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCGATCATGATCCATGGTaGACTGCGTGTAAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSDHDPW*TACKMS Trigger: GCTCATCTTACACGCAGTCCACCATGGATCATGATC...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACTTGGAAAGCAGACCTTaGCTAATGTCTTCATATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNLESRP*LMSSYP Trigger: AGGATATGAAGACATTAGCCAAGGTCTGCTTTCCAA...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCTCTTTTTGCCCAGGTTaGAGTACAATGGCGCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSSFCPG*STMARS Trigger: AGATCGCGCCATTGTACTCCAACCTGGGCAAAAAGA...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR TCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCGGATTAAGGCAGCAGTaGACAAAAGCCAGAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSGLRQQ*TKARVS Trigger: AGAAACTCTGGCTTTTGTTCACTGCTGCCTTAATCC...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCGAGAGTACTTGGTTTTaGAGTAGGTATGGTTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSESTWF*SRYGCA Trigger: AGCGCAACCATACCTACTGCAAAACCAAGTACTCTC...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCAGAGAAAAAGCTGCCTaGAGGATGAGAAGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSREKAA*RMRSCL Trigger: AAGACAGCTTCTCATCCTGCAGGCAGCTTTTTCTCT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCTCCAGGAAATCATCTTaGACAGACCTAGCCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSSRKSS*TDLAQK Trigger: TTTTTGGGCTAGGTCTGTGCAAGATGATTTCCTGGA...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCCTTTGGTGCAAGGCTTaGGGATACTTTCATACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSLWCKA*GYFHTD Trigger: ATCTGTATGAAAGTATCCCCAAGCCTTGCACCAAAG...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCTCATTTTTACAATGCTaGAAGGTCCTGATGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSSFLQC*KVLMIM Trigger: CATGATCATCAGGACCTTGCAGCATTGTAAAAATGA...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR GCA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCTTCTCATTTTTACAATaGTGCAAGGTCCTGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: SILFRKSKKLIRGPICHSFSFLQ*CKVLMI Trigger: GATCATCAGGACCTTGCAGCATTGTAAAAATGAGAA...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS TCA 90 bp | CAGAGCATCATGGAGATCATGATCCATGGTGGACTGCGTGTAAGATaGGCTGGGGGTGTCAGCAGAGTAAATTTGGAGGAGCCCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QSIMEIMIHGGLRVR*AGGVSRVNLEEPTV Trigger: TACTGTGGGCTCCTCCAAATTTACTCTGCTGACACCCCCAGCTCATCTTACACGCAGTCCACCATGGATCATGATCTCCATGATGCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACGCCTTGATGCCTTCTTaGGTGCAAGGCTTGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNALMPS*VQGLGI Trigger: TATCCCCAAGCCTTGCACCAAAGAAGGCATCAAGGC...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACCTGAGCCGCTTGTATTaGAACAGGACCAGAACCACC | + |
|
Preference number: 5 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNLSRLY*NRTRTT Trigger: GGTGGTTCTGGTCCTGTTCAAATACAAGCGGCTCAG...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACCTCTTTTTGCCCAGGTaGGAGTACAATGGCGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNLFLPR*EYNGAI Trigger: GATCGCGCCATTGTACTCCAACCTGGGCAAAAAGAG...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS GCA 90 bp | ATATGCCACTGTAAAAGCCCACCAAGTACATCCAGGAAATCATCTTaGACAGACCTAGCCCAAAAACCCACTGGTCTGCTGCATAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ICHCKSPPSTSRKSS*TDLAQKPTGLLHSS Trigger: GCTACTATGCAGCAGACCAGTGGGTTTTTGGGCTAGGTCTGTGCAAGATGATTTCCTGGATGTACTTGGTGGGCTTTTACAGTGGCATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCAGCCCAGGTGAACCCTaGCCAGGCTGGACTTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SILFRKSKKLIRGPICHSSPGEP*PGWTCL Trigger: TAGACAAGTCCAGCCTGGCAAGGGTTCACCTGGGCT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACACCAATCCGAGAATGTaGATTTCCAGGGAGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNTNPRM*ISRELR Trigger: TCTCAGCTCCCTGGAAATCAACATTCTCGGATTGGT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACAGCTGTAGGATGTACTaGCGAAATTTCTCCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNSCRMY*RNFSPR Trigger: TCTGGGGGAGAAATTTCGCAAGTACATCCTACAGCT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCGAGGAGCCCACAGTATaGGCAGAGCACAAAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SILFRKSKKLIRGPICHSEEPTV*AEHKKA Trigger: GGCCTTTTTGTGCTCTGCCAATACTGTGGGCTCCTC...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACCCTTGTAGTTCACGTTaGGAAAGCAGACCTTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNPCSSR*ESRPWL Trigger: TAGCCAAGGTCTGCTTTCCAAACGTGAACTACAAGG...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACTCTTTGGTGCAAGGCTaGGGGATACTTTCATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNSLVQG*GILSYR Trigger: TCTGTATGAAAGTATCCCCAAGCCTTGCACCAAAGA...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCTCCGAGATGGCAAGGTaGAGCAGGTACACATCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SILFRKSKKLIRGPICHSSEMAR*SRYTSV Trigger: GACTGATGTGTACCTGCTCAACCTTGCCATCTCGGA...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACATCCAGGAAATCATCTaGCACAGACCTAGCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNIQEII*HRPSPK Trigger: TTTTGGGCTAGGTCTGTGCAAGATGATTTCCTGGAT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCAGGCCCCTGCAGGTTTaGAAGAGCTGTAGGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SILFRKSKKLIRGPICHSRPLQV*KSCRMY Trigger: GTACATCCTACAGCTCTTCAAAACCTGCAGGGGCCT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCAGCTCCCCAAATGCCTaGATGCCTTCTTTGGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SILFRKSKKLIRGPICHSSSPNA*MPSLVQ Trigger: TTGCACCAAAGAAGGCATCAAGGCATTTGGGGAGCT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCATGGACCTGAGCCGCTaGTATTTGAACAGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SILFRKSKKLIRGPICHSMDLSR*YLNRTR Trigger: TCTGGTCCTGTTCAAATACAAGCGGCTCAGGTCCAT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS GCA 90 bp | TGCAAGGCTTGGGGATACTTTCATACAGATAGTAATTGCTGTATATaGTTTCATCGAGGGTGGTGTCTGCTATATCCGTGGGGTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: CKAWGYFHTDSNCCI*FHRGWCLLYPWGSF Trigger: AAATGAACCCCACGGATATAGCAGACACCACCCTCGATGAAAGCATATACAGCAATTACTATCTGTATGAAAGTATCCCCAAGCCTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCTTCCACGTCGTGGAGTaGAGAGAGTACTTGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SILFRKSKKLIRGPICHSFHVVE*REYLVL Trigger: CAAAACCAAGTACTCTCTCAACTCCACGACGTGGAA...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCGTCAGCAGAGTAAATTaGGAGGAGCCCACAGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: SILFRKSKKLIRGPICHSVSRVN*EEPTVL Trigger: CAATACTGTGGGCTCCTCCAAATTTACTCTGCTGAC...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
||
| CDS-3UTR CAA 90 bp | AAAGGTAGCGATTTACTCCATCAGCCAGTACTCTGCAATTCCCTCTGGAGAAACATCATCTTCACCGCCTaGTTCTTCTTCTCATTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KGSDLLHQPVLCNSLWRNIIFTA*FFFSFL Trigger: TAAAAATGAGAAGAAGAACAAGGCGGTGAAGATGAT...GTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGGAGTAAATCGCTACCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
||
| CDS-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCTTTGGAAAGCAGACCTaGGCTAATGTCTTCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: SILFRKSKKLIRGPICHSFGKQT*ANVFIS Trigger: GGATATGAAGACATTAGCCAAGGTCTGCTTTCCAAA...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
||
| CDS-3UTR CAA 90 bp | TCTATATTGTTCCGCAAAAGCAAGAAATTAATTAGAGGGCCCATTTGCCACAGCAATGTGGAAAGTTCATaGACTCTGCATTTCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: SILFRKSKKLIRGPICHSNVESS*TLHFTI Trigger: AATGGTGAAATGCAGAGTCAATGAACTTTCCACATT...GCTGTGGCAAATGGGCCCTCTAATTAATTTCTTGCTTTTGCGGAACAATATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
||
| CDS CAA 72 bp | AGGGAAAACACGAAGAGCAGATCCGAGATGGCAAGGTaGAGCAGGTACACATCAGTCATGGACCTGAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RENTKSRSEMAR*SRYTSVMDLSR Trigger: GCGGCTCAGGTCCATGACTGATGTGTACCTGCTCAACCTTGCCATCTCGGATCTGCTCTTCGTGTTTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
||
| CDS CCA 72 bp | GATCATGATCCATGGTGGACTGCGTGTAAGATGAGCTaGGGGTGTCAGCAGAGTAAATTTGGAGGAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DHDPWWTACKMS*GCQQSKFGGAH Trigger: GTGGGCTCCTCCAAATTTACTCTGCTGACACCCCCAGCTCATCTTACACGCAGTCCACCATGGATCATGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS CAA 72 bp | AGCATGATCCCTAAGGGGATCACCAATCCGAGAATGTaGATTTCCAGGGAGCTGAGAACCTTCCACGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: SMIPKGITNPRM*ISRELRTFHVV Trigger: CACGACGTGGAAGGTTCTCAGCTCCCTGGAAATCAACATTCTCGGATTGGTGATCCCCTTAGGGATCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS CAA 90 bp | CAAAAAGGGAGGGAAAACACGAAGAGCAGATCCGAGATGGCAAGGTaGAGCAGGTACACATCAGTCATGGACCTGAGCCGCTTGTATTTG | + |
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Preference number: 6 (lower is better) Translates to: QKGRENTKSRSEMAR*SRYTSVMDLSRLYL Trigger: CAAATACAAGCGGCTCAGGTCCATGACTGATGTGTACCTGCTCAACCTTGCCATCTCGGATCTGCTCTTCGTGTTTTCCCTCCCTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS TCA 72 bp | ATGGAGATCATGATCCATGGTGGACTGCGTGTAAGATaGGCTGGGGGTGTCAGCAGAGTAAATTTGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: MEIMIHGGLRVR*AGGVSRVNLEE Trigger: CTCCTCCAAATTTACTCTGCTGACACCCCCAGCTCATCTTACACGCAGTCCACCATGGATCATGATCTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS CCA 72 bp | CATTTTTCTACAGAGCATCATGGAGATCATGATCCATaGTGGACTGCGTGTAAGATGAGCTGGGGGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: HFSTEHHGDHDP*WTACKMSWGCQ Trigger: CTGACACCCCCAGCTCATCTTACACGCAGTCCACCATGGATCATGATCTCCATGATGCTCTGTAGAAAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS CAA 72 bp | TTGAGCAGGTACACATCAGTCATGGACCTGAGCCGCTaGTATTTGAACAGGACCAGAACCACCACAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: LSRYTSVMDLSR*YLNRTRTTTEF Trigger: AAATTCTGTGGTGGTTCTGGTCCTGTTCAAATACAAGCGGCTCAGGTCCATGACTGATGTGTACCTGCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS CAA 72 bp | CAGTATTGGCAGAGCACAAAAAGGCCCCTGCAGGTTTaGAAGAGCTGTAGGATGTACTTGCGAAATTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QYWQSTKRPLQV*KSCRMYLRNFS Trigger: GGAGAAATTTCGCAAGTACATCCTACAGCTCTTCAAAACCTGCAGGGGCCTTTTTGTGCTCTGCCAATACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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| CDS GCA 72 bp | TGGGGATACTTTCATACAGATAGTAATTGCTGTATATaGTTTCATCGAGGGTGGTGTCTGCTATATCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: WGYFHTDSNCCI*FHRGWCLLYPW Trigger: CCACGGATATAGCAGACACCACCCTCGATGAAAGCATATACAGCAATTACTATCTGTATGAAAGTATCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330953.6 |
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