RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCNY (Homo sapiens)

Ensembl gene IDs: ENSG00000108100

Ensembl transcript IDs: ENST00000265375.13, ENST00000339497.7, ENST00000374704.8, ENST00000374706.5, ENST00000465416.5, ENST00000470025.1, ENST00000490012.6, ENST00000492478.5, ENST00000493157.6, ENST00000497692.1

Found 558 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCATaGGGACTCCAGAGGGCCGGGCTGCTTAACCATTTTCCCTGCCTC +
Preference number: 1 (lower is better)
Translates to: LCIHRCARQLQLPPP*GLQRAGLLNHFPCL
Trigger: GAGGCAGGGAAAATGGTTAAGCAGCCCGGCCCTCTGGAGTCCCCATGGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 90 bp AGAGCGAGCTGGGATCTCCAGGGCACTGACGCTTCCTCCAAGCCTTaGTGCATGGGCGCTCATCCAGGCAGCTTGACGGAGCTATGCGTA +
Preference number: 1 (lower is better)
Translates to: RASWDLQGTDASSKP*CMGAHPGSLTELCV
Trigger: TACGCATAGCTCCGTCAAGCTGCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCCCAGCTCGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 90 bp GCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTaGCCACACCTCTGGCCTCACCTCATGCATGAAGGCACATCCCGA +
Preference number: 1 (lower is better)
Translates to: AGRQESQPRRGGRYR*PHLWPHLMHEGTSR
Trigger: TCGGGATGTGCCTTCATGCATGAGGTGAGGCCAGAGGTGTGGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR GCA 90 bp GCGAGCTGGGATCTCCAGGGCACTGACGCTTCCTCCAAGCCTTGCTaGATGGGCGCTCATCCAGGCAGCTTGACGGAGCTATGCGTAAAA +
Preference number: 1 (lower is better)
Translates to: ASWDLQGTDASSKPC*MGAHPGSLTELCVK
Trigger: TTTTACGCATAGCTCCGTCAAGCTGCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCCCAGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CCA 90 bp TCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCTaGGATCTCCAGGGCACTGACGCTTCCTCCAAGCCTTGCTGCATG +
Preference number: 1 (lower is better)
Translates to: SSTKEVLLLTVGRAS*DLQGTDASSKPCCM
Trigger: CATGCAGCAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR TCA 90 bp CTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTaGCAGTGGGGAGAGCGAGCTGGGATCTCCAGGGCACTGACGCTT +
Preference number: 1 (lower is better)
Translates to: LQDSSPLPPRRKCCC*QWGERAGISRALTL
Trigger: AAGCGTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 90 bp AGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTaGAGAACTCTCACAGGGACACCCTCTGCTGCACCGTGTCCTTCA +
Preference number: 1 (lower is better)
Translates to: RNGSYSVVPGTCPAL*RTLTGTPSAAPCPS
Trigger: TGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTGAGAGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 90 bp GCAGGGGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATaGCCAGCACTCTGCAGAACTCTCACAGGGACACCCTCTGCTGCA +
Preference number: 1 (lower is better)
Translates to: AGVQRNGSYSVVPGT*PALCRTLTGTPSAA
Trigger: TGCAGCAGAGGGTGTCCCTGTGAGAGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 90 bp AGGCACATGCCCAGCACTCTGCAGAACTCTCACAGGGACACCCTCTaGTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATTTTGTA +
Preference number: 1 (lower is better)
Translates to: RHMPSTLQNSHRDTL*CTVSFSPQSLTDFV
Trigger: TACAAAATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTGAGAGTTCTGCAGAGTGCTGGGCATGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CCA 90 bp TGGACTTGGAAGGAGAGGAATGGATTAGGCAGGGGTACAAAGAAATaGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGCAG +
Preference number: 1 (lower is better)
Translates to: WTWKERNGLGRGTKK*LLLGSSRHMPSTLQ
Trigger: CTGCAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACCCCTGCCTAATCCATTCCTCTCCTTCCAAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CCA 90 bp CCACACCTCTGGCCTCACCTCATGCATGAAGGCACATCCCGATCTTaGCAGGATTTCTCATCTGCCCTCCAATTTGGTTTTAAACTCCTG +
Preference number: 1 (lower is better)
Translates to: PHLWPHLMHEGTSRS*QDFSSALQFGFKLL
Trigger: CAGGAGTTTAAAACCAAATTGGAGGGCAGATGAGAAATCCTGCCAAGATCGGGATGTGCCTTCATGCATGAGGTGAGGCCAGAGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR GCA 90 bp AAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTaGTGCCACTGGCCTCCCAGAGACTTGAAAAGGGAAACAACTCAG +
Preference number: 1 (lower is better)
Translates to: KFSKLTWEEGETQTC*CHWPPRDLKRETTQ
Trigger: CTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 90 bp CCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTaGTGCTGCCACTGGCCTCCCAGAGACTTGAAAAGGGAAACAACT +
Preference number: 1 (lower is better)
Translates to: PKFSKLTWEEGETQT*CCHWPPRDLKRETT
Trigger: AGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 90 bp TTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTaGCACTGGCCTCCCAGAGACTTGAAAAGGGAAACAACTCAGAAA +
Preference number: 1 (lower is better)
Translates to: FSKLTWEEGETQTCC*HWPPRDLKRETTQK
Trigger: TTTCTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CCA 90 bp TATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATaGGAAGAAGGTGAAACACAGACCTGCTGCTGCCACTGGCCTCCC +
Preference number: 1 (lower is better)
Translates to: YDSRLIKMPKFSKLT*EEGETQTCCCHWPP
Trigger: GGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCGGAGAAACTAAGGGATaGTGTGGCCTCCGGCGGGCC +
Preference number: 2 (lower is better)
Translates to: VQPALHPPLRSPTSATAPGETKG*CGLRRA
Trigger: GGCCCGCCGGAGGCCACACCATCCCTTAGTTTCTCC...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACGTGGGGAGAGCGAGCTaGGATCTCCAGGGCACTGAC +
Preference number: 2 (lower is better)
Translates to: ALGAASSASTAALANFSYVGRAS*DLQGTD
Trigger: GTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCAC...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCAGGAAGTGCTGTTGCTaGCAGTGGGGAGAGCGAGCT +
Preference number: 2 (lower is better)
Translates to: VQPALHPPLRSPTSATAPRKCCC*QWGERA
Trigger: AGCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCT...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCTCCAGAGGGCCGGGCTaGTTAACCATTTTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: VQPALHPPLRSPTSATAPSRGPG*LTIFPA
Trigger: GGCAGGGAAAATGGTTAAGCAGCCCGGCCCTCTGGA...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGTCCTCCAAGCCTTGCTaGATGGGCGCTCATCCAGGC +
Preference number: 2 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGSSKPC*MGAHPG
Trigger: GCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGA...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGCACAGGGACACCCTCTaGTGCACCGTGTCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGHRDTL*CTVSFS
Trigger: GCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCTCCAGAGGGCCGGGCTaGTTAACCATTTTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPSRGPG*LTIFPA
Trigger: GGCAGGGAAAATGGTTAAGCAGCCCGGCCCTCTGGA...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGCAGCTACCGCCCCCATaGGGACTCCAGAGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLQLPPP*GLQRAG
Trigger: CCCGGCCCTCTGGAGTCCCCATGGGGGCGGTAGCTG...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGAGCACAGCCCACTGGTaGGGAAGAAAGCTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGSTAHW*GRKLRR
Trigger: TCTTCTGAGCTTTCTTCCTCACCAGTGGGCTGTGCT...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGGTAGTTCCAGGCACATaGCCAGCACTCTGCAGAACT +
Preference number: 2 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGVVPGT*PALCRT
Trigger: AGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTAC...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGGGATGGAGATGGCTCTaGCCAAGCCCGAGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSGWRWL*PSPRAG
Trigger: GCCTGCTCTCGGGCTTGGGCAGAGCCATCTCCATCC...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGGTGGGGAGAGCGAGCTaGGATCTCCAGGGCACTGAC +
Preference number: 2 (lower is better)
Translates to: VPVILATREAEAELLESGVGRAS*DLQGTD
Trigger: GTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCAC...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGGGATCTCCAGGGCACTaGCGCTTCCTCCAAGCCTTG +
Preference number: 2 (lower is better)
Translates to: VPVILATREAEAELLESGGSPGH*RFLQAL
Trigger: CAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCC...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGGGCCTCCCAGAGACTTaGAAAGGGAAACAACTCAGA +
Preference number: 2 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGGLPET*KGKQLR
Trigger: TCTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCC...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCCACATGGGAAGAAGGTaGAACACAGACCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPHMGRR*NTDLLL
Trigger: CAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTG...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACTCCTCCAAGCCTTGCTaGATGGGCGCTCATCCAGGC +
Preference number: 2 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHSSKPC*MGAHPG
Trigger: GCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGA...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGTCCTCCAAGCCTTGCTaGATGGGCGCTCATCCAGGC +
Preference number: 2 (lower is better)
Translates to: VPVILATREAEAELLESGSSKPC*MGAHPG
Trigger: GCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGA...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATTCCTCCAAGCCTTGCTaGATGGGCGCTCATCCAGGC +
Preference number: 2 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDSSKPC*MGAHPG
Trigger: GCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGA...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGCACAGGGACACCCTCTaGTGCACCGTGTCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: VPVILATREAEAELLESGHRDTL*CTVSFS
Trigger: GCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGACACAGACCTGCTGCTaGCACTGGCCTCCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: VPVILATREAEAELLESGTQTCC*HWPPRD
Trigger: GTCTCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGT...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCCAAGCCTTGCTGCATaGGCGCTCATCCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHPSLAA*ALIQAA
Trigger: AGCTGCCTGGATGAGCGCCCATGCAGCAAGGCTTGG...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGTGGAAGTCTGCGCCATaGTGGGTACAAACTACATCC +
Preference number: 2 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGWKSAP*WVQTTS
Trigger: GGATGTAGTTTGTACCCACCATGGCGCAGACTTCCA...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCGGCCTCCCAGAGACTTaGAAAGGGAAACAACTCAGA +
Preference number: 2 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPGLPET*KGKQLR
Trigger: TCTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCC...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGGCTTCCTCCAAGCCTTaGTGCATGGGCGCTCATCCA +
Preference number: 2 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSASSKP*CMGAHP
Trigger: TGGATGAGCGCCCATGCAGCAAGGCTTGGAGGAAGC...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCTCTGCATCCACCGCTaGGCTCGCCAACTTCAGCTA +
Preference number: 2 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSLCIHR*ARQLQL
Trigger: TAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAG...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGGCCTCACCTCATGCATaGAGGCACATCCCGATCTTG +
Preference number: 2 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSASPHA*RHIPIL
Trigger: CAAGATCGGGATGTGCCTTCATGCATGAGGTGAGGC...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGAGGGACACCCTCTGCTaGACCGTGTCCTTCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLRDTLC*TVSFSP
Trigger: TGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCT...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGTTGGAAGGAGAGGAATaGATTAGGCAGGGGTACAAA +
Preference number: 2 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGLEGEE*IRQGYK
Trigger: TTTGTACCCCTGCCTAATCCATTCCTCTCCTTCCAA...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGAGCACAGCCCACTGGTaGGGAAGAAAGCTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSSTAHW*GRKLRR
Trigger: TCTTCTGAGCTTTCTTCCTCACCAGTGGGCTGTGCT...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGCTCTGCATCCACCGCTaGGCTCGCCAACTTCAGCTA +
Preference number: 2 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLLCIHR*ARQLQL
Trigger: TAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAG...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACACATGCCCAGCACTCTaGAGAACTCTCACAGGGACA +
Preference number: 2 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHTCPAL*RTLTGT
Trigger: TGTCCCTGTGAGAGTTCTGCAGAGTGCTGGGCATGT...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGGTAGTTCCAGGCACATaGCCAGCACTCTGCAGAACT +
Preference number: 2 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSVVPGT*PALCRT
Trigger: AGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTAC...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGTCTGGCCTCACCTCATaGATGAAGGCACATCCCGAT +
Preference number: 2 (lower is better)
Translates to: VPVILATREAEAELLESGSGLTS*MKAHPD
Trigger: ATCGGGATGTGCCTTCATGCATGAGGTGAGGCCAGA...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGTCTGGCCTCACCTCATaGATGAAGGCACATCCCGAT +
Preference number: 2 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSSGLTS*MKAHPD
Trigger: ATCGGGATGTGCCTTCATGCATGAGGTGAGGCCAGA...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACGCACAAGCACCCATGTaGTCTAGAATGTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHAQAPM*SRMFLG
Trigger: CCCCAAGAACATTCTAGATCACATGGGTGCTTGTGC...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGTACCTATGTGTCAAGTaGTTCATCCTGCCAGTAAAA +
Preference number: 2 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGYLCVK*FILPVK
Trigger: TTTTACTGGCAGGATGAATCACTTGACACATAGGTA...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGTGGCCCAAACAGGTATaGTTATACCTGACACAAATT +
Preference number: 2 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGWPKQV*LYLTQI
Trigger: AATTTGTGTCAGGTATAAGCATACCTGTTTGGGCCA...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCGGAGAAACTAAGGGATaGTGTGGCCTCCGGCGGGCC +
Preference number: 2 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCGETKG*CGLRRA
Trigger: GGCCCGCCGGAGGCCACACCATCCCTTAGTTTCTCC...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATTGGAAGTCTGCGCCATaGTGGGTACAAACTACATCC +
Preference number: 2 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDWKSAP*WVQTTS
Trigger: GGATGTAGTTTGTACCCACCATGGCGCAGACTTCCA...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCTTGGCTTGGAGTTCTTaGGATTTCGACTTTCTGAGT +
Preference number: 2 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPLAWSS*DFDFLS
Trigger: ACTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAA...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGAGTCTAAACAAGACTTaGGTCTGGTTTTATGGAATC +
Preference number: 2 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGSLNKT*VWFYGI
Trigger: GATTCCATAAAACCAGACTCAAGTCTTGTTTAGACT...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGAAATATGGCCCCAGGTaGGAAGTTACCAAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: VPVILATREAEAELLESGKYGPR*EVTKSS
Trigger: GCTGCTTTTGGTAACTTCTCACCTGGGGCCATATTT...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCTCCAGAGGGCCGGGCTaGTTAACCATTTTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAASRGPG*LTIFPA
Trigger: GGCAGGGAAAATGGTTAAGCAGCCCGGCCCTCTGGA...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTGGGTGCAGCCAGCTCTaGATCCACCGCTGCGCTCGC +
Preference number: 2 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTGCSQL*IHRCAR
Trigger: GCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCC...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAGGGTGCAGCCAGCTCTaGATCCACCGCTGCGCTCGC +
Preference number: 2 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAGCSQL*IHRCAR
Trigger: GCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCC...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGCAGCTACCGCCCCCATaGGGACTCCAGAGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLQLPPP*GLQRAG
Trigger: CCCGGCCCTCTGGAGTCCCCATGGGGGCGGTAGCTG...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGAAGGGTGTACAGAAATaGAACAAGCACAGCCCACTG +
Preference number: 2 (lower is better)
Translates to: VPVILATREAEAELLESGKGVQK*NKHSPL
Trigger: CAGTGGGCTGTGCTTGTTCCATTTCTGTACACCCTT...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATAAGGGTGTACAGAAATaGAACAAGCACAGCCCACTG +
Preference number: 2 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDKGVQK*NKHSPL
Trigger: CAGTGGGCTGTGCTTGTTCCATTTCTGTACACCCTT...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGAGGGGTACAAAGAAATaGCTCCTACTCGGTAGTTCC +
Preference number: 2 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSRGTKK*LLLGSS
Trigger: GGAACTACCGAGTAGGAGCCATTTCTTTGTACCCCT...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGCAAAGCATGTTTCATTaGGAGCAGGCAATGTTTGGG +
Preference number: 2 (lower is better)
Translates to: VPVILATREAEAELLESGQSMFH*EQAMFG
Trigger: CCCAAACATTGCCTGCTCTCAATGAAACATGCTTTG...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACGGGATTTCGACTTTCTaGGTCCCTTCCATTTCCAAA +
Preference number: 2 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHGISTF*VPSISK
Trigger: TTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCC...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGAAGTCTGCGCCATGGTaGGTACAAACTACATCCCCT +
Preference number: 2 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLKSAPW*VQTTSP
Trigger: AGGGGATGTAGTTTGTACCCACCATGGCGCAGACTT...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCATTTTTCCCTTCAATaGTCTTCCCACTGGAATACC +
Preference number: 2 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSHFSLQ*SSHWNT
Trigger: GGTATTCCAGTGGGAAGATCATTGAAGGGAAAAATG...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGCTTGAAGAGAGAAGGTaGTTTTGGTACCCATACAGA +
Preference number: 2 (lower is better)
Translates to: VPVILATREAEAELLESGLEERR*FWYPYR
Trigger: TCTGTATGGGTACCAAAATCACCTTCTCTCTTCAAG...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGGGTGCAGCCAGCTCTaGATCCACCGCTGCGCTCGC +
Preference number: 2 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTGCSQL*IHRCAR
Trigger: GCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCGTAGTTCCAGGCACATaGCCAGCACTCTGCAGAACT +
Preference number: 2 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAVVPGT*PALCRT
Trigger: AGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTAC...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAGGAGAAACTAAGGGATaGTGTGGCCTCCGGCGGGCC +
Preference number: 2 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAGETKG*CGLRRA
Trigger: GGCCCGCCGGAGGCCACACCATCCCTTAGTTTCTCC...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTGTGGGGAGAGCGAGCTaGGATCTCCAGGGCACTGAC +
Preference number: 2 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTVGRAS*DLQGTD
Trigger: GTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCAC...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACTTTTCCAAGCTCACATaGGAAGAAGGTGAAACACAG +
Preference number: 2 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHFSKLT*EEGETQ
Trigger: CTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAA...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCTAACACTTTTGGCTTaGAGTTCTTGGGATTTCGAC +
Preference number: 2 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHLTLLA*SSWDFD
Trigger: GTCGAAATCCCAAGAACTCCAAGCCAAAAGTGTTAG...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR TCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAGGATCTCCAGGGCACTaGCGCTTCCTCCAAGCCTTG +
Preference number: 2 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAGSPGH*RFLQAL
Trigger: CAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCC...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTGGATCTCCAGGGCACTaGCGCTTCCTCCAAGCCTTG +
Preference number: 2 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTGSPGH*RFLQAL
Trigger: CAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCC...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACTGGCCCAAACAGGTATaGTTATACCTGACACAAATT +
Preference number: 2 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHWPKQV*LYLTQI
Trigger: AATTTGTGTCAGGTATAAGCATACCTGTTTGGGCCA...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCATCTTACAGGACACACTaGCCCAGCCCTGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: GFRLSESLPFPKHVSLRASYRTH*PSPGCS
Trigger: GCTGCACCCAGGGCTGGGCCAGTGTGTCCTGTAAGA...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCTGGAAGTCTGCGCCATaGTGGGTACAAACTACATCC +
Preference number: 2 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAWKSAP*WVQTTS
Trigger: GGATGTAGTTTGTACCCACCATGGCGCAGACTTCCA...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGTTGCAACAATGGACTTaGAAGGAGAGGAATGGATTA +
Preference number: 2 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSLQQWT*KERNGL
Trigger: TAATCCATTCCTCTCCTTCCAAGTCCATTGTTGCAA...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR GCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCGGTGAAACACAGACCTaGTGCTGCCACTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLGETQT*CCHWPP
Trigger: GGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACC...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGTGGGGAGAGCGAGCTaGGATCTCCAGGGCACTGAC +
Preference number: 2 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTVGRAS*DLQGTD
Trigger: GTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCAC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGGATCTCCAGGGCACTaGCGCTTCCTCCAAGCCTTG +
Preference number: 2 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGGSPGH*RFLQAL
Trigger: CAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCC...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGGTGAAACACAGACCTaGTGCTGCCACTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTGETQT*CCHWPP
Trigger: GGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAGGAGAAACTAAGGGATaGTGTGGCCTCCGGCGGGCC +
Preference number: 2 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKGETKG*CGLRRA
Trigger: GGCCCGCCGGAGGCCACACCATCCCTTAGTTTCTCC...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTTCTTACAGGACACACTaGCCCAGCCCTGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGSYRTH*PSPGCS
Trigger: GCTGCACCCAGGGCTGGGCCAGTGTGTCCTGTAAGA...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTCTCTGCATCCACCGCTaGGCTCGCCAACTTCAGCTA +
Preference number: 2 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTLCIHR*ARQLQL
Trigger: TAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAG...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAAGGGACACCCTCTGCTaGACCGTGTCCTTCAGCCCA +
Preference number: 2 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKRDTLC*TVSFSP
Trigger: TGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCT...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAACATGCCCAGCACTCTaGAGAACTCTCACAGGGACA +
Preference number: 2 (lower is better)
Translates to: GFRLSESLPFPKHVSLRATCPAL*RTLTGT
Trigger: TGTCCCTGTGAGAGTTCTGCAGAGTGCTGGGCATGT...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAATCTTACAGGACACACTaGCCCAGCCCTGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKSYRTH*PSPGCS
Trigger: GCTGCACCCAGGGCTGGGCCAGTGTGTCCTGTAAGA...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTTGGAAGGAGAGGAATaGATTAGGCAGGGGTACAAA +
Preference number: 2 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCLEGEE*IRQGYK
Trigger: TTTGTACCCCTGCCTAATCCATTCCTCTCCTTCCAA...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAATCTTACAGGACACACTaGCCCAGCCCTGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKSYRTH*PSPGCS
Trigger: GCTGCACCCAGGGCTGGGCCAGTGTGTCCTGTAAGA...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAAAGTCTGCGCCATGGTaGGTACAAACTACATCCCCT +
Preference number: 2 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAKSAPW*VQTTSP
Trigger: AGGGGATGTAGTTTGTACCCACCATGGCGCAGACTT...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGGCACAAGCACCCATGTaGTCTAGAATGTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLAQAPM*SRMFLG
Trigger: CCCCAAGAACATTCTAGATCACATGGGTGCTTGTGC...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGGGCCTCCCAGAGACTTaGAAAGGGAAACAACTCAGA +
Preference number: 2 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLGLPET*KGKQLR
Trigger: TCTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCC...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCAAGTCTGCGCCATGGTaGGTACAAACTACATCCCCT +
Preference number: 2 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLKSAPW*VQTTSP
Trigger: AGGGGATGTAGTTTGTACCCACCATGGCGCAGACTT...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTCAAAGCATGTTTCATTaGGAGCAGGCAATGTTTGGG +
Preference number: 2 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTQSMFH*EQAMFG
Trigger: CCCAAACATTGCCTGCTCTCAATGAAACATGCTTTG...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTACAAACTACATCCCCTaGTCTGTGGGACCAAAATCA +
Preference number: 2 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTTNYIP*SVGPKS
Trigger: TGATTTTGGTCCCACAGAGCAGGGGATGTAGTTTGT...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTAAGTCTGCGCCATGGTaGGTACAAACTACATCCCCT +
Preference number: 2 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGKSAPW*VQTTSP
Trigger: AGGGGATGTAGTTTGTACCCACCATGGCGCAGACTT...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAAGGGTGTACAGAAATaGAACAAGCACAGCCCACTG +
Preference number: 2 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLKGVQK*NKHSPL
Trigger: CAGTGGGCTGTGCTTGTTCCATTTCTGTACACCCTT...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCACATTTTTCCCTTCAATaGTCTTCCCACTGGAATACC +
Preference number: 2 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAHFSLQ*SSHWNT
Trigger: GGTATTCCAGTGGGAAGATCATTGAAGGGAAAAATG...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAGGCCTCCCAGAGACTTaGAAAGGGAAACAACTCAGA +
Preference number: 2 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKGLPET*KGKQLR
Trigger: TCTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCC...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTACAAACTACATCCCCTaGTCTGTGGGACCAAAATCA +
Preference number: 2 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGTNYIP*SVGPKS
Trigger: TGATTTTGGTCCCACAGAGCAGGGGATGTAGTTTGT...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTTTGCAACAATGGACTTaGAAGGAGAGGAATGGATTA +
Preference number: 2 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTLQQWT*KERNGL
Trigger: TAATCCATTCCTCTCCTTCCAAGTCCATTGTTGCAA...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CAA 90 bp CTGACACAAATTTCACTAAAACCTAACACTTTTGGCTTGGAGTTCTaGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTT +
Preference number: 2 (lower is better)
Translates to: LTQISLKPNTFGLEF*GFRLSESLPFPKHV
Trigger: AACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAAAAGTGTTAGGTTTTAGTGAAATTTGTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CAA 90 bp TGCTTATACCTGACACAAATTTCACTAAAACCTAACACTTTTGGCTaGGAGTTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCA +
Preference number: 2 (lower is better)
Translates to: CLYLTQISLKPNTFG*EFLGFRLSESLPFP
Trigger: TGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAAAAGTGTTAGGTTTTAGTGAAATTTGTGTCAGGTATAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGCCCACAAAGTCTGACTaGTTTTGTAACAACAACTTC +
Preference number: 2 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLPTKSD*FCNNNF
Trigger: GAAGTTGTTGTTACAAAATCAGTCAGACTTTGTGGG...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTTCTAAGCACCCACAATaGAAATGCAAGTTGAGTTTT +
Preference number: 2 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTSKHPQ*KCKLSF
Trigger: AAAACTCAACTTGCATTTTCATTGTGGGTGCTTAGA...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCATCTAAGCACCCACAATaGAAATGCAAGTTGAGTTTT +
Preference number: 2 (lower is better)
Translates to: GFRLSESLPFPKHVSLRASKHPQ*KCKLSF
Trigger: AAAACTCAACTTGCATTTTCATTGTGGGTGCTTAGA...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAACTTGAAGAGAGAAGGTaGTTTTGGTACCCATACAGA +
Preference number: 2 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKLEERR*FWYPYR
Trigger: TCTGTATGGGTACCAAAATCACCTTCTCTCTTCAAG...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR TCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTCATTACATATGCAAGTaGCTCACACTCTTAGATTTC +
Preference number: 2 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGHYICK*LTLLDF
Trigger: GAAATCTAAGAGTGTGAGTCACTTGCATATGTAATG...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR GCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAATGGCCCAAACAGGTATaGTTATACCTGACACAAATT +
Preference number: 2 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKWPKQV*LYLTQI
Trigger: AATTTGTGTCAGGTATAAGCATACCTGTTTGGGCCA...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCACGAAGGAAGTGCTGTaGCTGACAGTGGGGAGAGCG +
Preference number: 3 (lower is better)
Translates to: VQPALHPPLRSPTSATAPTKEVL*LTVGRA
Trigger: CGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGT...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CCA 72 bp CACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCATaGGGACTCCAGAGGGCCGGGCTGCTTAACCATTTT +
Preference number: 3 (lower is better)
Translates to: HRCARQLQLPPP*GLQRAGLLNHF
Trigger: AAAATGGTTAAGCAGCCCGGCCCTCTGGAGTCCCCATGGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 72 bp TGGGATCTCCAGGGCACTGACGCTTCCTCCAAGCCTTaGTGCATGGGCGCTCATCCAGGCAGCTTGACGGAG +
Preference number: 3 (lower is better)
Translates to: WDLQGTDASSKP*CMGAHPGSLTE
Trigger: CTCCGTCAAGCTGCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 72 bp GATCTCCAGGGCACTGACGCTTCCTCCAAGCCTTGCTaGATGGGCGCTCATCCAGGCAGCTTGACGGAGCTA +
Preference number: 3 (lower is better)
Translates to: DLQGTDASSKPC*MGAHPGSLTEL
Trigger: TAGCTCCGTCAAGCTGCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 72 bp CAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTaGCCACACCTCTGGCCTCACCTCATGCATGAAGGC +
Preference number: 3 (lower is better)
Translates to: QESQPRRGGRYR*PHLWPHLMHEG
Trigger: GCCTTCATGCATGAGGTGAGGCCAGAGGTGTGGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR TCA 72 bp TCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTaGCAGTGGGGAGAGCGAGCTGGGATCTCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: SSPLPPRRKCCC*QWGERAGISRA
Trigger: TGCCCTGGAGATCCCAGCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 72 bp TCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTaGAGAACTCTCACAGGGACACCCTCTGCTGCACCG +
Preference number: 3 (lower is better)
Translates to: SYSVVPGTCPAL*RTLTGTPSAAP
Trigger: CGGTGCAGCAGAGGGTGTCCCTGTGAGAGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CCA 72 bp AAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCTaGGATCTCCAGGGCACTGACGCTTCCTCCAAGCCT +
Preference number: 3 (lower is better)
Translates to: KEVLLLTVGRAS*DLQGTDASSKP
Trigger: AGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCAGGCACATCCCGATCTaGGCAGGATTTCTCATCTGC +
Preference number: 3 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPRHIPI*AGFLIC
Trigger: GCAGATGAGAAATCCTGCCAAGATCGGGATGTGCCT...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR GCA 72 bp CCCAGCACTCTGCAGAACTCTCACAGGGACACCCTCTaGTGCACCGTGTCCTTCAGCCCACAAAGTCTGACT +
Preference number: 3 (lower is better)
Translates to: PSTLQNSHRDTL*CTVSFSPQSLT
Trigger: AGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTGAGAGTTCTGCAGAGTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 72 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTaGAGTGAGCCCAGATCGCACCATTGCACACCAGCC +
Preference number: 3 (lower is better)
Translates to: LRQNCLNPGSGG*SEPRSHHCTPA
Trigger: GGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CAA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCGAGAGCAGGCAATGTTaGGGGATCAGGTGTATGATT +
Preference number: 3 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPESRQC*GIRCMI
Trigger: AATCATACACCTGATCCCCAAACATTGCCTGCTCTC...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR GCA 72 bp AGCACTCTGCAGAACTCTCACAGGGACACCCTCTGCTaGACCGTGTCCTTCAGCCCACAAAGTCTGACTGAT +
Preference number: 3 (lower is better)
Translates to: STLQNSHRDTLC*TVSFSPQSLTD
Trigger: ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTGAGAGTTCTGCAGAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR GCA 72 bp CAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATaGCCAGCACTCTGCAGAACTCTCACAGGGACACCC +
Preference number: 3 (lower is better)
Translates to: QRNGSYSVVPGT*PALCRTLTGTP
Trigger: GGGTGTCCCTGTGAGAGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGTGGCCTCCCAGAGACTaGAAAAGGGAAACAACTCAG +
Preference number: 3 (lower is better)
Translates to: VPVILATREAEAELLESGWPPRD*KRETTQ
Trigger: CTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCCA...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR GCA 72 bp TCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTaGTGCTGCCACTGGCCTCCCAGAGACTTGAAAAGG +
Preference number: 3 (lower is better)
Translates to: SKLTWEEGETQT*CCHWPPRDLKR
Trigger: CCTTTTCAAGTCTCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGCAGTCAATTTCGCCATaGTTGAAGAAAAACGGTATA +
Preference number: 3 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGQSISP*LKKNGI
Trigger: TATACCGTTTTTCTTCAACAATGGCGAAATTGACTG...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR GCA 72 bp CTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTaGCACTGGCCTCCCAGAGACTTGAAAAGGGAAACA +
Preference number: 3 (lower is better)
Translates to: LTWEEGETQTCC*HWPPRDLKRET
Trigger: TGTTTCCCTTTTCAAGTCTCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CCA 72 bp AAGGAGAGGAATGGATTAGGCAGGGGTACAAAGAAATaGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGC +
Preference number: 3 (lower is better)
Translates to: KERNGLGRGTKK*LLLGSSRHMPS
Trigger: GCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACCCCTGCCTAATCCATTCCTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGTTTGGCTTGGAGTTCTaGGGATTTCGACTTTCTGAG +
Preference number: 3 (lower is better)
Translates to: VPVILATREAEAELLESGFGLEF*GFRLSE
Trigger: CTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAAA...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CAA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCGCTCATCCAGGCAGCTaGACGGAGCTATGCGTAAAA +
Preference number: 3 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAAHPGS*TELCVK
Trigger: TTTTACGCATAGCTCCGTCAAGCTGCCTGGATGAGC...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR TCA 72 bp AGGGTGTACAGAAATGGAACAAGCACAGCCCACTGGTaGGGAAGAAAGCTCAGAAGACAGCGCGCAGAAATA +
Preference number: 3 (lower is better)
Translates to: RVYRNGTSTAHW*GRKLRRQRAEI
Trigger: TATTTCTGCGCGCTGTCTTCTGAGCTTTCTTCCTCACCAGTGGGCTGTGCTTGTTCCATTTCTGTACACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CCA 72 bp TGGCCTCACCTCATGCATGAAGGCACATCCCGATCTTaGCAGGATTTCTCATCTGCCCTCCAATTTGGTTTT +
Preference number: 3 (lower is better)
Translates to: WPHLMHEGTSRS*QDFSSALQFGF
Trigger: AAAACCAAATTGGAGGGCAGATGAGAAATCCTGCCAAGATCGGGATGTGCCTTCATGCATGAGGTGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
3UTR-3UTR CAA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGGCCTCCCAGAGACTaGAAAAGGGAAACAACTCAG +
Preference number: 3 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCWPPRD*KRETTQ
Trigger: CTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCCA...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTGCTCATCCAGGCAGCTaGACGGAGCTATGCGTAAAA +
Preference number: 3 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTAHPGS*TELCVK
Trigger: TTTTACGCATAGCTCCGTCAAGCTGCCTGGATGAGC...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CCA 72 bp AGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATaGGAAGAAGGTGAAACACAGACCTGCTGCTGCCAC +
Preference number: 3 (lower is better)
Translates to: RLIKMPKFSKLT*EEGETQTCCCH
Trigger: GTGGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAGCTCATCCAGGCAGCTaGACGGAGCTATGCGTAAAA +
Preference number: 3 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKAHPGS*TELCVK
Trigger: TTTTACGCATAGCTCCGTCAAGCTGCCTGGATGAGC...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCCAGTCAATTTCGCCATaGTTGAAGAAAAACGGTATA +
Preference number: 3 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCQSISP*LKKNGI
Trigger: TATACCGTTTTTCTTCAACAATGGCGAAATTGACTG...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTGGGAAAGGGATACTTTaGGTTCAGCACTACAGTCAA +
Preference number: 3 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTGKGIL*VQHYSQ
Trigger: TTGACTGTAGTGCTGAACCAAAAGTATCCCTTTCCC...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTTGGCCTCCCAGAGACTaGAAAAGGGAAACAACTCAG +
Preference number: 3 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGWPPRD*KRETTQ
Trigger: CTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCCA...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTCCTAACACTTTTGGCTaGGAGTTCTTGGGATTTCGA +
Preference number: 3 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTPNTFG*EFLGFR
Trigger: TCGAAATCCCAAGAACTCCAAGCCAAAAGTGTTAGG...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAAGCTCATCCAGGCAGCTaGACGGAGCTATGCGTAAAA +
Preference number: 3 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKAHPGS*TELCVK
Trigger: TTTTACGCATAGCTCCGTCAAGCTGCCTGGATGAGC...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGCTTGCAACAATGGACTaGGAAGGAGAGGAATGGATT +
Preference number: 3 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLLATMD*EGEEWI
Trigger: AATCCATTCCTCTCCTTCCAAGTCCATTGTTGCAAG...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGGGAAAGGGATACTTTaGGTTCAGCACTACAGTCAA +
Preference number: 3 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTGKGIL*VQHYSQ
Trigger: TTGACTGTAGTGCTGAACCAAAAGTATCCCTTTCCC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAGGGAAAGGGATACTTTaGGTTCAGCACTACAGTCAA +
Preference number: 3 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKGKGIL*VQHYSQ
Trigger: TTGACTGTAGTGCTGAACCAAAAGTATCCCTTTCCC...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAACTTGCAACAATGGACTaGGAAGGAGAGGAATGGATT +
Preference number: 3 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKLATMD*EGEEWI
Trigger: AATCCATTCCTCTCCTTCCAAGTCCATTGTTGCAAG...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR-3UTR CAA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAAGAGAGAAGGTGATTTaGGTACCCATACAGAGTAGA +
Preference number: 3 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKREKVI*VPIQSR
Trigger: TCTACTCTGTATGGGTACCAAAATCACCTTCTCTCT...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCAGCTACCGCCCCCATaGGGACTCCAGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYQLPPP*GLQRAG
Trigger: CCCGGCCCTCTGGAGTCCCCATGGGGGCGGTAGCTG...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCCCGCGCTTCCCCAGTTaGTGTCCGCTTCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPPRFPS*CPLPRR
Trigger: CCGCCGGGGAAGCGGACACCAACTGGGGAAGCGCGG...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374704.8
CDS-3UTR GCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACTCCCGGTCGCTGATGTaGTGCAGGTTGCAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYSRSLM*CRLQPV
Trigger: CACGGGCTGCAACCTGCAGCACATCAGCGACCGGGA...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCTCCTCCAAGCCTTGCTaGATGGGCGCTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: VQPALHPPLRSPTSATAPSSKPC*MGAHPG
Trigger: GCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGA...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCTCAGGTTGTCTGCACTaGCTGAGCGCTTCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: VQPALHPPLRSPTSATAPSGCLH*LSASSR
Trigger: CCGCGAGGAAGCGCTCAGCCAGTGCAGACAACCTGA...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCGCTTCCTCCAAGCCTTaGTGCATGGGCGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: VQPALHPPLRSPTSATAPASSKP*CMGAHP
Trigger: TGGATGAGCGCCCATGCAGCAAGGCTTGGAGGAAGC...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGGTTGTCTGCACTGGCTaGGCGCTTCCTCGCGGATCT +
Preference number: 4 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGVVCTG*ALPRGS
Trigger: AGATCCGCGAGGAAGCGCTCAGCCAGTGCAGACAAC...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGAGGGACACCCTCTGCTaGACCGTGTCCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGRDTLC*TVSFSP
Trigger: TGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCT...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGGGTGAAACACAGACCTaGTGCTGCCACTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGGETQT*CCHWPP
Trigger: GGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACC...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCGGATCTCCAGGGCACTaGCGCTTCCTCCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPGSPGH*RFLQAL
Trigger: CAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCC...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCCACATGGGAAGAAGGTaGAACACAGACCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VQPALHPPLRSPTSATAPHMGRR*NTDLLL
Trigger: CAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTG...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCTCCTCCAAGCCTTGCTaGATGGGCGCTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPSSKPC*MGAHPG
Trigger: GCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGA...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACGGGTGCAGCCAGCTCTaGATCCACCGCTGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHGCSQL*IHRCAR
Trigger: GCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCC...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCACACAGACCTGCTGCTaGCACTGGCCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPTQTCC*HWPPRD
Trigger: GTCTCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGT...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCAAGTGGGGGTTGCAGTaGGCCCAGATCGCACCATTG +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPKWGLQ*AQIAPL
Trigger: CAATGGTGCGATCTGGGCTCACTGCAACCCCCACTT...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACACATGCCCAGCACTCTaGAGAACTCTCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYTCPAL*RTLTGT
Trigger: TGTCCCTGTGAGAGTTCTGCAGAGTGCTGGGCATGT...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCGGATGGAGATGGCTCTaGCCAAGCCCGAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASGWRWL*PSPRAG
Trigger: GCCTGCTCTCGGGCTTGGGCAGAGCCATCTCCATCC...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCCTGCTTTCAGCCACTaGGGTCACCGTCTATGTTCT +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYPAFSH*GHRLCS
Trigger: AGAACATAGACGGTGACCCCAGTGGCTGAAAGCAGG...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265375.13
CDS-3UTR CCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCGGAGAAACTAAGGGATaGTGTGGCCTCCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASGETKG*CGLRRA
Trigger: GGCCCGCCGGAGGCCACACCATCCCTTAGTTTCTCC...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCACTACAAAAATCAGCTaGGCATGGTGGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VQPALHPPLRSPTSATAPTTKIS*AWWWVP
Trigger: AGGCACCCACCACCATGCCCAGCTGATTTTTGTAGT...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGGTGCTGGCCCGAGGATaGTCTGAAGGATTGAATTCC +
Preference number: 4 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGVLARG*SEGLNS
Trigger: GGAATTCAATCCTTCAGATCATCCTCGGGCCAGCAC...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265375.13
ENST00000374704.8
CDS-3UTR TCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACGCACAAGCACCCATGTaGTCTAGAATGTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYAQAPM*SRMFLG
Trigger: CCCCAAGAACATTCTAGATCACATGGGTGCTTGTGC...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGCACATGGGAAGAAGGTaGAACACAGACCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGHMGRR*NTDLLL
Trigger: CAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTG...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCACACAGACCTGCTGCTaGCACTGGCCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASTQTCC*HWPPRD
Trigger: GTCTCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGT...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATTCCGGAGCTTGGGACTaGACGACACGCAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDSGAWD*TTRSTR
Trigger: CCTCGTGCTGCGTGTCGTCCAGTCCCAAGCTCCGGA...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACGGAGAAACTAAGGGATaGTGTGGCCTCCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHGETKG*CGLRRA
Trigger: GGCCCGCCGGAGGCCACACCATCCCTTAGTTTCTCC...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATGGAGAAACTAAGGGATaGTGTGGCCTCCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDGETKG*CGLRRA
Trigger: GGCCCGCCGGAGGCCACACCATCCCTTAGTTTCTCC...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCCCAAGCCTTGCTGCATaGGCGCTCATCCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASPSLAA*ALIQAA
Trigger: AGCTGCCTGGATGAGCGCCCATGCAGCAAGGCTTGG...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACTGGAAGTCTGCGCCATaGTGGGTACAAACTACATCC +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYWKSAP*WVQTTS
Trigger: GGATGTAGTTTGTACCCACCATGGCGCAGACTTCCA...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACGGCCCGAGGATGATCTaGAGGATTGAATTCCATGTT +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYGPRMI*RIEFHV
Trigger: AACATGGAATTCAATCCTTCAGATCATCCTCGGGCC...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGATGGCCTCAAGCTTGTaGGCCCTCTCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGMASSL*ALSLLR
Trigger: CCTGAGCAGGGAGAGGGCTCACAAGCTTGAGGCCAT...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGGTTGTCTGCACTGGCTaGGCGCTTCCTCGCGGATCT +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGVVCTG*ALPRGS
Trigger: AGATCCGCGAGGAAGCGCTCAGCCAGTGCAGACAAC...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCAAGTGGGGGTTGCAGTaGGCCCAGATCGCACCATTG +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASKWGLQ*AQIAPL
Trigger: CAATGGTGCGATCTGGGCTCACTGCAACCCCCACTT...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGAGGGACACCCTCTGCTaGACCGTGTCCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGRDTLC*TVSFSP
Trigger: TGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCT...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACAGGGACACCCTCTaGTGCACCGTGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSHRDTL*CTVSFS
Trigger: GCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCACAGGGACACCCTCTaGTGCACCGTGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHHRDTL*CTVSFS
Trigger: GCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATCACAGGGACACCCTCTaGTGCACCGTGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDHRDTL*CTVSFS
Trigger: GCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACACACAGACCTGCTGCTaGCACTGGCCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHTQTCC*HWPPRD
Trigger: GTCTCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGT...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATGGTGAAACACAGACCTaGTGCTGCCACTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDGETQT*CCHWPP
Trigger: GGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACC...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCCAAGCCTTGCTGCATaGGCGCTCATCCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSPSLAA*ALIQAA
Trigger: AGCTGCCTGGATGAGCGCCCATGCAGCAAGGCTTGG...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGTGGGGAGAGCGAGCTaGGATCTCCAGGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVVGRAS*DLQGTD
Trigger: GTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCAC...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGTCTTACAGGACACACTaGCCCAGCCCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGSYRTH*PSPGCS
Trigger: GCTGCACCCAGGGCTGGGCCAGTGTGTCCTGTAAGA...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCATTTGTCCTGGAGGATaGTGGTTAATGAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: VQPALHPPLRSPTSATAPICPGG*WLMKRL
Trigger: GAGTCTCTTCATTAACCATCATCCTCCAGGACAAAT...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCAAGGTACACCAGGGTaGCGATGGCACATTCAGCCG +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHQGTPG*RWHIQP
Trigger: CGGCTGAATGTGCCATCGTCACCCTGGTGTACCTTG...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGCAAGGTACACCAGGGTaGCGATGGCACATTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGQGTPG*RWHIQP
Trigger: CGGCTGAATGTGCCATCGTCACCCTGGTGTACCTTG...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGAAATATGGCCCCAGGTaGGAAGTTACCAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGKYGPR*EVTKSS
Trigger: GCTGCTTTTGGTAACTTCTCACCTGGGGCCATATTT...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCAGGTTGTTCGCTTCTaGCAGAGAACGAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYQVVRF*QRTKIK
Trigger: TTTGATCTTCGTTCTCTGGCAGAAGCGAACAACCTG...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATGCTTCCTCCAAGCCTTaGTGCATGGGCGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDASSKP*CMGAHP
Trigger: TGGATGAGCGCCCATGCAGCAAGGCTTGGAGGAAGC...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGGAAACACAGACCTGCTaGTGCCACTGGCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGETQTC*CHWPPR
Trigger: TCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTC...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATGAAACACAGACCTGCTaGTGCCACTGGCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDETQTC*CHWPPR
Trigger: TCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTC...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGTGAAACACAGACCTaGTGCTGCCACTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVGETQT*CCHWPP
Trigger: GGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTCACC...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGGAGCATCCTTCCATCTaGGTCCCTGTTTTTGATGTG +
Preference number: 4 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGEHPSI*VPVFDV
Trigger: CACATCAAAAACAGGGACCCAGATGGAAGGATGCTC...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCGTGTTTGTCATAATCTaGTGGCACTTCGGATTTCGA +
Preference number: 4 (lower is better)
Translates to: VQPALHPPLRSPTSATAPVFVII*WHFGFR
Trigger: TCGAAATCCGAAGTGCCACCAGATTATGACAAACAC...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCTTAAGAGATGATGGCTaGGGACCACCGGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASLRDDG*GPPGQS
Trigger: ACTCTGCCCCGGTGGTCCCCAGCCATCATCTCTTAA...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGCCAAGCCTTGCTGCATaGGCGCTCATCCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVPSLAA*ALIQAA
Trigger: AGCTGCCTGGATGAGCGCCCATGCAGCAAGGCTTGG...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCCAGCTACCGCCCCCATaGGGACTCCAGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCQLPPP*GLQRAG
Trigger: CCCGGCCCTCTGGAGTCCCCATGGGGGCGGTAGCTG...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACTCAGCTGAGCAGCACTaGACAGTGTCCGAACGAACC +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHSAEQH*TVSERT
Trigger: GGTTCGTTCGGACACTGTTCAGTGCTGCTCAGCTGA...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTCAGCCGTCAGCTaGGCAGCACTGAACAGTGTC +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHHSAVS*AALNSV
Trigger: GACACTGTTCAGTGCTGCTCAGCTGACGGCTGAATG...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATCATTCAGCCGTCAGCTaGGCAGCACTGAACAGTGTC +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDHSAVS*AALNSV
Trigger: GACACTGTTCAGTGCTGCTCAGCTGACGGCTGAATG...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGATGGCCTCAAGCTTGTaGGCCCTCTCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLMASSL*ALSLLR
Trigger: CCTGAGCAGGGAGAGGGCTCACAAGCTTGAGGCCAT...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGGTTGTCTGCACTGGCTaGGCGCTTCCTCGCGGATCT +
Preference number: 4 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLVVCTG*ALPRGS
Trigger: AGATCCGCGAGGAAGCGCTCAGCCAGTGCAGACAAC...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGAGGAAGTGCTGTTGCTaGCAGTGGGGAGAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVRKCCC*QWGERA
Trigger: AGCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCT...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACGGAACTGTATTTCCTTaGTATTTGTCCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYGTVFP*YLSWRM
Trigger: CATCCTCCAGGACAAATAGCAAGGAAATACAGTTCC...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGAAACACAGACCTGCTaGTGCCACTGGCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVETQTC*CHWPPR
Trigger: TCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTC...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCAAGGGTGTACAGAAATaGAACAAGCACAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPKGVQK*NKHSPL
Trigger: CAGTGGGCTGTGCTTGTTCCATTTCTGTACACCCTT...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCCTGGGTCCCTGTTTTTaGTGTGATAATATATTGCAA +
Preference number: 4 (lower is better)
Translates to: VQPALHPPLRSPTSATAPLGPCF*CDNILQ
Trigger: TTGCAATATATTATCACATCAAAAACAGGGACCCAG...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCTCTAAGCACCCACAATaGAAATGCAAGTTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: VQPALHPPLRSPTSATAPSKHPQ*KCKLSF
Trigger: AAAACTCAACTTGCATTTTCATTGTGGGTGCTTAGA...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCCAAAGCATGTTTCATTaGGAGCAGGCAATGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPQSMFH*EQAMFG
Trigger: CCCAAACATTGCCTGCTCTCAATGAAACATGCTTTG...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCGGGATTTCGACTTTCTaGGTCCCTTCCATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPGISTF*VPSISK
Trigger: TTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCC...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATTCTGGCCTCACCTCATaGATGAAGGCACATCCCGAT +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDSGLTS*MKAHPD
Trigger: ATCGGGATGTGCCTTCATGCATGAGGTGAGGCCAGA...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACTCTGGCCTCACCTCATaGATGAAGGCACATCCCGAT +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHSGLTS*MKAHPD
Trigger: ATCGGGATGTGCCTTCATGCATGAGGTGAGGCCAGA...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACTGTATACTTGAGGTTTaGTTGACTGACTGTGCTATC +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYCILEV*LTDCAI
Trigger: GATAGCACAGTCAGTCAACCAAACCTCAAGTATACA...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCTGGAAGTCTGCGCCATaGTGGGTACAAACTACATCC +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASWKSAP*WVQTTS
Trigger: GGATGTAGTTTGTACCCACCATGGCGCAGACTTCCA...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACTTGCAACAATGGACTTaGAAGGAGAGGAATGGATTA +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYLQQWT*KERNGL
Trigger: TAATCCATTCCTCTCCTTCCAAGTCCATTGTTGCAA...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACAAAATCAGCTGGGCATaGTGGTGGGTGCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHKISWA*WWVPVI
Trigger: GATCACAGGCACCCACCACCATGCCCAGCTGATTTT...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCGGCCCGAGGATGATCTaGAGGATTGAATTCCATGTT +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASGPRMI*RIEFHV
Trigger: AACATGGAATTCAATCCTTCAGATCATCCTCGGGCC...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGTCAGCTGAGCAGCACTaGACAGTGTCCGAACGAACC +
Preference number: 4 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLSAEQH*TVSERT
Trigger: GGTTCGTTCGGACACTGTTCAGTGCTGCTCAGCTGA...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCATGGCCTCAAGCTTGTaGGCCCTCTCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAMASSL*ALSLLR
Trigger: CCTGAGCAGGGAGAGGGCTCACAAGCTTGAGGCCAT...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATGCACAAGCACCCATGTaGTCTAGAATGTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDAQAPM*SRMFLG
Trigger: CCCCAAGAACATTCTAGATCACATGGGTGCTTGTGC...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCCATTTTTCCCTTCAATaGTCTTCCCACTGGAATACC +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPHFSLQ*SSHWNT
Trigger: GGTATTCCAGTGGGAAGATCATTGAAGGGAAAAATG...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCATTACATATGCAAGTaGCTCACACTCTTAGATTTC +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYHYICK*LTLLDF
Trigger: GAAATCTAAGAGTGTGAGTCACTTGCATATGTAATG...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACGGCCTCCCAGAGACTTaGAAAGGGAAACAACTCAGA +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHGLPET*KGKQLR
Trigger: TCTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCC...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACGCCTGGCCAACGTGGTaGAACTCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHAWPTW*NSVSTK
Trigger: TTTAGTAGAGACAGAGTTTCACCACGTTGGCCAGGC...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCTCCTCCAAGCCTTGCTaGATGGGCGCTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAASSKPC*MGAHPG
Trigger: GCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGA...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGTAGTTCCAGGCACATaGCCAGCACTCTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVVVPGT*PALCRT
Trigger: AGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTAC...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCACACAGACCTGCTGCTaGCACTGGCCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAATQTCC*HWPPRD
Trigger: GTCTCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGT...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGTCTGGCCTCACCTCATaGATGAAGGCACATCCCGAT +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVSGLTS*MKAHPD
Trigger: ATCGGGATGTGCCTTCATGCATGAGGTGAGGCCAGA...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGCCTTGCTATTTGTCCTaGAGGATGATGGTTAATGAA +
Preference number: 4 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGPCYLS*RMMVNE
Trigger: TTCATTAACCATCATCCTCCAGGACAAATAGCAAGG...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGTTTGTCATAATCTGGTaGCACTTCGGATTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGFVIIW*HFGFRK
Trigger: CTTTCGAAATCCGAAGTGCCACCAGATTATGACAAA...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCGTGGGGAGAGCGAGCTaGGATCTCCAGGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCVGRAS*DLQGTD
Trigger: GTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCAC...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTCAGCTACCGCCCCCATaGGGACTCCAGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTQLPPP*GLQRAG
Trigger: CCCGGCCCTCTGGAGTCCCCATGGGGGCGGTAGCTG...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTTATTTGGAAGTCTGCGCCATGGTGGGTACAAACTACATCCCCTGCTCTGTGGTCTTACAGGACACACTaGCCCAGCCCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FIWKSAPWWVQTTSPALWSYRTH*PSPGCS
Trigger: GCTGCACCCAGGGCTGGGCCAGTGTGTCCTGTAAGA...CCACAGAGCAGGGGATGTAGTTTGTACCCACCATGGCGCAGACTTCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGTGGAAGTCTGCGCCATaGTGGGTACAAACTACATCC +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGWKSAP*WVQTTS
Trigger: GGATGTAGTTTGTACCCACCATGGCGCAGACTTCCA...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGACTACAAAAATCAGCTaGGCATGGTGGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSTTKIS*AWWWVP
Trigger: AGGCACCCACCACCATGCCCAGCTGATTTTTGTAGT...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGGGCCCGAGGATGATCTaGAGGATTGAATTCCATGTT +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGGPRMI*RIEFHV
Trigger: AACATGGAATTCAATCCTTCAGATCATCCTCGGGCC...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265375.13
ENST00000374704.8
CDS-3UTR TCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCCAAGGTACACCAGGGTaGCGATGGCACATTCAGCCG +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAQGTPG*RWHIQP
Trigger: CGGCTGAATGTGCCATCGTCACCCTGGTGTACCTTG...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGTCTAAGCACCCACAATaGAAATGCAAGTTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGSKHPQ*KCKLSF
Trigger: AAAACTCAACTTGCATTTTCATTGTGGGTGCTTAGA...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCCAGGTTGTTCGCTTCTaGCAGAGAACGAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASQVVRF*QRTKIK
Trigger: TTTGATCTTCGTTCTCTGGCAGAAGCGAACAACCTG...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTCCTCCAAGCCTTGCTaGATGGGCGCTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCSSKPC*MGAHPG
Trigger: GCCTGGATGAGCGCCCATGCAGCAAGGCTTGGAGGA...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp TTTATTTGGAAGTCTGCGCCATGGTGGGTACAAACTACATCCCCTGCTCTGTGGGCTTCCTCCAAGCCTTaGTGCATGGGCGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: FIWKSAPWWVQTTSPALWASSKP*CMGAHP
Trigger: TGGATGAGCGCCCATGCAGCAAGGCTTGGAGGAAGC...CCACAGAGCAGGGGATGTAGTTTGTACCCACCATGGCGCAGACTTCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACGATCAAAATAATACTTaGCATAGACACTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: ALGAASSASTAALANFSYDQNNT*HRHWKE
Trigger: TTCCTTCCAGTGTCTATGCCAAGTATTATTTTGATC...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTCAGGTTGTCTGCACTaGCTGAGCGCTTCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCSGCLH*LSASSR
Trigger: CCGCGAGGAAGCGCTCAGCCAGTGCAGACAACCTGA...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCACCCCAGGATGGAGATaGCTCTGCCCAAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCTPGWR*LCPSPR
Trigger: TCTCGGGCTTGGGCAGAGCCATCTCCATCCTGGGGT...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGACTACAAAAATCAGCTaGGCATGGTGGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVTTKIS*AWWWVP
Trigger: AGGCACCCACCACCATGCCCAGCTGATTTTTGTAGT...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCTACTTGAGGTTTGGTTaGCTGACTGTGCTATCATCT +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASYLRFG*LTVLSS
Trigger: AGATGATAGCACAGTCAGTCAACCAAACCTCAAGTA...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCCAAGGTACACCAGGGTaGCGATGGCACATTCAGCCG +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCQGTPG*RWHIQP
Trigger: CGGCTGAATGTGCCATCGTCACCCTGGTGTACCTTG...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTCCGTAGTTAAGAGATaGTGGCTGGGGACCACCGGG +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCSVVKR*WLGTTG
Trigger: CCCGGTGGTCCCCAGCCATCATCTCTTAACTACGGA...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCCATTTTTCCCTTCAATaGTCTTCCCACTGGAATACC +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASHFSLQ*SSHWNT
Trigger: GGTATTCCAGTGGGAAGATCATTGAAGGGAAAAATG...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCTCTAAGCACCCACAATaGAAATGCAAGTTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPSKHPQ*KCKLSF
Trigger: AAAACTCAACTTGCATTTTCATTGTGGGTGCTTAGA...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp TTTATTTGGAAGTCTGCGCCATGGTGGGTACAAACTACATCCCCTGCTCTGTGGGCCTCACCTCATGCATaGAGGCACATCCCGATCTTG +
Preference number: 4 (lower is better)
Translates to: FIWKSAPWWVQTTSPALWASPHA*RHIPIL
Trigger: CAAGATCGGGATGTGCCTTCATGCATGAGGTGAGGC...CCACAGAGCAGGGGATGTAGTTTGTACCCACCATGGCGCAGACTTCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCCAGCTCTTGATGTTGTaGCCGGAGGGGACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAQLLML*PEGTGS
Trigger: TGAACCTGTCCCCTCCGGTCACAACATCAAGAGCTG...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS-3UTR TCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCTCCCAGTTCAGCTCTTaGTGTTGTGACCGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAASQFSS*CCDRRG
Trigger: TCCCCTCCGGTCACAACATCAAGAGCTGAACTGGGA...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS-3UTR GCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCGGAACTGTATTTCCTTaGTATTTGTCCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASGTVFP*YLSWRM
Trigger: CATCCTCCAGGACAAATAGCAAGGAAATACAGTTCC...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGCAGGTTGTTCGCTTCTaGCAGAGAACGAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGQVVRF*QRTKIK
Trigger: TTTGATCTTCGTTCTCTGGCAGAAGCGAACAACCTG...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCCTCTGCATCCACCGCTaGGCTCGCCAACTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCLCIHR*ARQLQL
Trigger: TAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAG...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCGAAACACAGACCTGCTaGTGCCACTGGCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCETQTC*CHWPPR
Trigger: TCTGGGAGGCCAGTGGCAGCAGCAGGTCTGTGTTTC...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCTCACTCCCCAAATTTTaGTTTCAGCTTAGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPSLPKF*FQLSLK
Trigger: CTTTAAGCTAAGCTGAAAGCAAAATTTGGGGAGTGA...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACTCTCTCACGTCCGTCTaGGATTTACTGAGGAATATT +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHSLTSV*DLLRNI
Trigger: AATATTCCTCAGTAAATCTCAGACGGACGTGAGAGA...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265375.13
ENST00000374704.8
CDS-3UTR TCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCAGCACAGCCCACTGGTaGGGAAGAAAGCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAASTAHW*GRKLRR
Trigger: TCTTCTGAGCTTTCTTCCTCACCAGTGGGCTGTGCT...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATCTTGAAGAGAGAAGGTaGTTTTGGTACCCATACAGA +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDLEERR*FWYPYR
Trigger: TCTGTATGGGTACCAAAATCACCTTCTCTCTTCAAG...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTTGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACGT +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCLRSGV*DQPGQR
Trigger: ACGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAA...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCCTGGTGGCCTCAGTATaGTCTTCCTGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCLVASV*SSWYEA
Trigger: AGCCTCGTACCAGGAAGATCATACTGAGGCCACCAG...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS-3UTR GCA 90 bp TTTATTTGGAAGTCTGCGCCATGGTGGGTACAAACTACATCCCCTGCTCTGTGGGTAGTTCCAGGCACATaGCCAGCACTCTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: FIWKSAPWWVQTTSPALWVVPGT*PALCRT
Trigger: AGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTAC...CCACAGAGCAGGGGATGTAGTTTGTACCCACCATGGCGCAGACTTCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCATCCGGAGCTTGGGACTaGACGACACGCAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRASGAWD*TTRSTR
Trigger: CCTCGTGCTGCGTGTCGTCCAGTCCCAAGCTCCGGA...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTTAAGAGATGATGGCTaGGGACCACCGGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCLRDDG*GPPGQS
Trigger: ACTCTGCCCCGGTGGTCCCCAGCCATCATCTCTTAA...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCTAACACTTTTGGCTTaGAGTTCTTGGGATTTCGAC +
Preference number: 4 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSLTLLA*SSWDFD
Trigger: GTCGAAATCCCAAGAACTCCAAGCCAAAAGTGTTAG...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCAAGGAAACCCCAGGATaGAGATGGCTCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCKETPG*RWLCPS
Trigger: GCTTGGGCAGAGCCATCTCCATCCTGGGGTTTCCTT...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGATTTGTCCTGGAGGATaGTGGTTAATGAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVICPGG*WLMKRL
Trigger: GAGTCTCTTCATTAACCATCATCCTCCAGGACAAAT...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCCTGGGTCCCTGTTTTTaGTGTGATAATATATTGCAA +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASLGPCF*CDNILQ
Trigger: TTGCAATATATTATCACATCAAAAACAGGGACCCAG...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTTATTTGGAAGTCTGCGCCATGGTGGGTACAAACTACATCCCCTGCTCTGTGGGCACAAGCACCCATGTaGTCTAGAATGTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FIWKSAPWWVQTTSPALWAQAPM*SRMFLG
Trigger: CCCCAAGAACATTCTAGATCACATGGGTGCTTGTGC...CCACAGAGCAGGGGATGTAGTTTGTACCCACCATGGCGCAGACTTCCAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATCCCACAAAGTCTGACTaGTTTTGTAACAACAACTTC +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDPTKSD*FCNNNF
Trigger: GAAGTTGTTGTTACAAAATCAGTCAGACTTTGTGGG...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCGGCCTCCCAGAGACTTaGAAAGGGAAACAACTCAGA +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAGLPET*KGKQLR
Trigger: TCTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCC...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCGCCTGGCCAACGTGGTaGAACTCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAAWPTW*NSVSTK
Trigger: TTTAGTAGAGACAGAGTTTCACCACGTTGGCCAGGC...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCAAAGCTCTGGGGCGATaGCTTCTAGTCCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCKALGR*LLVPVQ
Trigger: CTGAACTGGGACTAGAAGTCATCGCCCCAGAGCTTT...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS-3UTR TCA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCGATGATCTGAAGGATTaGATTCCATGTTCAAATCTC +
Preference number: 4 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASDDLKD*IPCSNL
Trigger: GAGATTTGAACATGGAATTCAATCCTTCAGATCATC...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS-3UTR GCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCTCCCGGTCGCTGATGTaGTGCAGGTTGCAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLSRSLM*CRLQPV
Trigger: CACGGGCTGCAACCTGCAGCACATCAGCGACCGGGA...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAGGGTGCAGCCAGCTCTaGATCCACCGCTGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKGCSQL*IHRCAR
Trigger: GCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCC...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGACAAACTACATCCCCTaGTCTGTGGGACCAAAATCA +
Preference number: 4 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLTNYIP*SVGPKS
Trigger: TGATTTTGGTCCCACAGAGCAGGGGATGTAGTTTGT...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAAGGGACACCCTCTGCTaGACCGTGTCCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRARDTLC*TVSFSP
Trigger: TGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCT...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATTGGCCCAAACAGGTATaGTTATACCTGACACAAATT +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDWPKQV*LYLTQI
Trigger: AATTTGTGTCAGGTATAAGCATACCTGTTTGGGCCA...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAACCATGCCTCTGCCCCTaGTGTCCCCGGACAAGCCCC +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKPCLCP*CPRTSP
Trigger: GGGGCTTGTCCGGGGACAGCAGGGGCAGAGGCATGG...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS-3UTR CCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGTGTATACTTGAGGTTTaGTTGACTGACTGTGCTATC +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGCILEV*LTDCAI
Trigger: GATAGCACAGTCAGTCAACCAAACCTCAAGTATACA...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGAATCTGCTTCTGCTCTaGGTTGTGTTTGTCATAATC +
Preference number: 4 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSNLLLL*VVFVII
Trigger: GATTATGACAAACACAACCCAGAGCAGAAGCAGATT...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGGTGGGGAGAGCGAGCTaGGATCTCCAGGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLVGRAS*DLQGTD
Trigger: GTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCAC...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCAAATCTGTAAAATATaGCCCCAGGTGAGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSQICKI*PQVRSY
Trigger: GTAACTTCTCACCTGGGGCCATATTTTACAGATTTG...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGCTGGGTCCCTGTTTTTaGTGTGATAATATATTGCAA +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGLGPCF*CDNILQ
Trigger: TTGCAATATATTATCACATCAAAAACAGGGACCCAG...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCGGATCTCCAGGGCACTaGCGCTTCCTCCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLGSPGH*RFLQAL
Trigger: CAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCC...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGCCCACAAAGTCTGACTaGTTTTGTAACAACAACTTC +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVPTKSD*FCNNNF
Trigger: GAAGTTGTTGTTACAAAATCAGTCAGACTTTGTGGG...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGCATTTTTCCCTTCAATaGTCTTCCCACTGGAATACC +
Preference number: 4 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLHFSLQ*SSHWNT
Trigger: GGTATTCCAGTGGGAAGATCATTGAAGGGAAAAATG...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATAGTCTAAACAAGACTTaGGTCTGGTTTTATGGAATC +
Preference number: 4 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDSLNKT*VWFYGI
Trigger: GATTCCATAAAACCAGACTCAAGTCTTGTTTAGACT...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCGCCTGGCCAACGTGGTaGAACTCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCAWPTW*NSVSTK
Trigger: TTTAGTAGAGACAGAGTTTCACCACGTTGGCCAGGC...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGGATGATCTGAAGGATTaGATTCCATGTTCAAATCGT +
Preference number: 4 (lower is better)
Translates to: VPVILATREAEAELLESGDDLKD*IPCSNR
Trigger: ACGATTTGAACATGGAATTCAATCCTTCAGATCATC...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374704.8
CDS-3UTR TCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCCAGCAGTTCTCAGACTaGACGTGCACAGAATTACCT +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAQQFSD*TCTELP
Trigger: AGGTAATTCTGTGCACGTTCAGTCTGAGAACTGCTG...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS-3UTR GCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTTCCAGAGGGCCGGGCTaGTTAACCATTTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTSRGPG*LTIFPA
Trigger: GGCAGGGAAAATGGTTAAGCAGCCCGGCCCTCTGGA...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTCTCTGCATCCACCGCTaGGCTCGCCAACTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTLCIHR*ARQLQL
Trigger: TAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAG...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGTGGCCCAAACAGGTATaGTTATACCTGACACAAATT +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVWPKQV*LYLTQI
Trigger: AATTTGTGTCAGGTATAAGCATACCTGTTTGGGCCA...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGGATGGAGATGGCTCTaGCCAAGCCCGAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTGWRWL*PSPRAG
Trigger: GCCTGCTCTCGGGCTTGGGCAGAGCCATCTCCATCC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTTCCGGAGCTTGGGACTaGACGACACGCAGCACGAGG +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGSGAWD*TTRSTR
Trigger: CCTCGTGCTGCGTGTCGTCCAGTCCCAAGCTCCGGA...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACTATCATCTAGGAAAATaGTGGAGCAGGAACTGTATT +
Preference number: 4 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHYHLGK*WSRNCI
Trigger: AATACAGTTCCTGCTCCACCATTTTCCTAGATGATA...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCGAGCATCCTTCCATCTaGGTCCCTGTTTTTGATGTG +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAEHPSI*VPVFDV
Trigger: CACATCAAAAACAGGGACCCAGATGGAAGGATGCTC...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGGAGAAACTAAGGGATaGTGTGGCCTCCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGGETKG*CGLRRA
Trigger: GGCCCGCCGGAGGCCACACCATCCCTTAGTTTCTCC...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGTGGGGAGAGCGAGCTaGGATCTCCAGGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGVGRAS*DLQGTD
Trigger: GTCAGTGCCCTGGAGATCCCAGCTCGCTCTCCCCAC...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCAAGGGTGTACAGAAATaGAACAAGCACAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAKGVQK*NKHSPL
Trigger: CAGTGGGCTGTGCTTGTTCCATTTCTGTACACCCTT...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGCAAATCTGTAAAATATaGCCCCAGGTGAGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVQICKI*PQVRSY
Trigger: GTAACTTCTCACCTGGGGCCATATTTTACAGATTTG...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTATGGCCTCAAGCTTGTaGGCCCTCTCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTMASSL*ALSLLR
Trigger: CCTGAGCAGGGAGAGGGCTCACAAGCTTGAGGCCAT...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGTTGTCTGCACTGGCTaGGCGCTTCCTCGCGGATCT +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTVVCTG*ALPRGS
Trigger: AGATCCGCGAGGAAGCGCTCAGCCAGTGCAGACAAC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGTCCGTAGTTAAGAGATaGTGGCTGGGGACCACCGGG +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLSVVKR*WLGTTG
Trigger: CCCGGTGGTCCCCAGCCATCATCTCTTAACTACGGA...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGGAAGTGCTGTTGCTaGCAGTGGGGAGAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLRKCCC*QWGERA
Trigger: AGCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCT...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGCCCACAAAGTCTGACTaGTTTTGTAACAACAACTTC +
Preference number: 4 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLPTKSD*FCNNNF
Trigger: GAAGTTGTTGTTACAAAATCAGTCAGACTTTGTGGG...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGTACCTATGTGTCAAGTaGTTCATCCTGCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLYLCVK*FILPVK
Trigger: TTTTACTGGCAGGATGAATCACTTGACACATAGGTA...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCAAGTGGGGGTTGCAGTaGGCCCAGATCGCACCATTG +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLKWGLQ*AQIAPL
Trigger: CAATGGTGCGATCTGGGCTCACTGCAACCCCCACTT...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCATTGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACGT +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRALRSGV*DQPGQR
Trigger: ACGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAA...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGTCCAGAGGGCCGGGCTaGTTAACCATTTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLSRGPG*LTIFPA
Trigger: GGCAGGGAAAATGGTTAAGCAGCCCGGCCCTCTGGA...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp TTTATTTGGAAGTCTGCGCCATGGTGGGTACAAACTACATCCCCTGCTCTGTGGACAAACTACATCCCCTaGTCTGTGGGACCAAAATCA +
Preference number: 4 (lower is better)
Translates to: FIWKSAPWWVQTTSPALWTNYIP*SVGPKS
Trigger: TGATTTTGGTCCCACAGAGCAGGGGATGTAGTTTGT...CCACAGAGCAGGGGATGTAGTTTGTACCCACCATGGCGCAGACTTCCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTAGGGACACCCTCTGCTaGACCGTGTCCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTRDTLC*TVSFSP
Trigger: TGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCT...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTCACAGGGACACCCTCTaGTGCACCGTGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGHRDTL*CTVSFS
Trigger: GCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTTCAGGTTGTCTGCACTaGCTGAGCGCTTCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTSGCLH*LSASSR
Trigger: CCGCGAGGAAGCGCTCAGCCAGTGCAGACAACCTGA...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTCCAAGCCTTGCTGCATaGGCGCTCATCCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGPSLAA*ALIQAA
Trigger: AGCTGCCTGGATGAGCGCCCATGCAGCAAGGCTTGG...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTTCTTACAGGACACACTaGCCCAGCCCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTSYRTH*PSPGCS
Trigger: GCTGCACCCAGGGCTGGGCCAGTGTGTCCTGTAAGA...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCTTGGAAGGAGAGGAATaGATTAGGCAGGGGTACAAA +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAALEGEE*IRQGYK
Trigger: TTTGTACCCCTGCCTAATCCATTCCTCTCCTTCCAA...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTACCCCAGGATGGAGATaGCTCTGCCCAAGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGTPGWR*LCPSPR
Trigger: TCTCGGGCTTGGGCAGAGCCATCTCCATCCTGGGGT...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTAAGGAAACCCCAGGATaGAGATGGCTCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTKETPG*RWLCPS
Trigger: GCTTGGGCAGAGCCATCTCCATCCTGGGGTTTCCTT...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGTCAGCTGAGCAGCACTaGACAGTGTCCGAACGAACC +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLSAEQH*TVSERT
Trigger: GGTTCGTTCGGACACTGTTCAGTGCTGCTCAGCTGA...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAGGATCTCCAGGGCACTaGCGCTTCCTCCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKGSPGH*RFLQAL
Trigger: CAAGGCTTGGAGGAAGCGTCAGTGCCCTGGAGATCC...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTAGGAAGTGCTGTTGCTaGCAGTGGGGAGAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGRKCCC*QWGERA
Trigger: AGCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCT...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGCATTACATATGCAAGTaGCTCACACTCTTAGATTTC +
Preference number: 4 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLHYICK*LTLLDF
Trigger: GAAATCTAAGAGTGTGAGTCACTTGCATATGTAATG...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCACACATGGGAAGAAGGTaGAACACAGACCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAHMGRR*NTDLLL
Trigger: CAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTG...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCCAAAGCATGTTTCATTaGGAGCAGGCAATGTTTGGG +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCQSMFH*EQAMFG
Trigger: CCCAAACATTGCCTGCTCTCAATGAAACATGCTTTG...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTTATTTGGAAGTCTGCGCCATGGTGGGTACAAACTACATCCCCTGCTCTGTGGCTTGAAGAGAGAAGGTaGTTTTGGTACCCATACAGA +
Preference number: 4 (lower is better)
Translates to: FIWKSAPWWVQTTSPALWLEERR*FWYPYR
Trigger: TCTGTATGGGTACCAAAATCACCTTCTCTCTTCAAG...CCACAGAGCAGGGGATGTAGTTTGTACCCACCATGGCGCAGACTTCCAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCCTTGAAGAGAGAAGGTaGTTTTGGTACCCATACAGA +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAALEERR*FWYPYR
Trigger: TCTGTATGGGTACCAAAATCACCTTCTCTCTTCAAG...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGAGTCTAAACAAGACTTaGGTCTGGTTTTATGGAATC +
Preference number: 4 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLSLNKT*VWFYGI
Trigger: GATTCCATAAAACCAGACTCAAGTCTTGTTTAGACT...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGCTTCCTCCAAGCCTTaGTGCATGGGCGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGASSKP*CMGAHP
Trigger: TGGATGAGCGCCCATGCAGCAAGGCTTGGAGGAAGC...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGTCACTCCCCAAATTTTaGTTTCAGCTTAGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLSLPKF*FQLSLK
Trigger: CTTTAAGCTAAGCTGAAAGCAAAATTTGGGGAGTGA...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCCATCTAGGAAAATGGTaGAGCAGGAACTGTATTTCC +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAHLGKW*SRNCIS
Trigger: GGAAATACAGTTCCTGCTCCACCATTTTCCTAGATG...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCGTGTTTGTCATAATCTaGTGGCACTTCGGATTTCGA +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAVFVII*WHFGFR
Trigger: TCGAAATCCGAAGTGCCACCAGATTATGACAAACAC...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCAAGGAAACCCCAGGATaGAGATGGCTCTGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLKETPG*RWLCPS
Trigger: GCTTGGGCAGAGCCATCTCCATCCTGGGGTTTCCTT...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTCGGCTCTCAACCTGGTaGCCTCAGTATGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTRLSTW*PQYDLP
Trigger: AGGAAGATCATACTGAGGCCACCAGGTTGAGAGCCG...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS-3UTR TCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTCTCTCACGTCCGTCTaGGATTTACTGAGGAATATT +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCSLTSV*DLLRNI
Trigger: AATATTCCTCAGTAAATCTCAGACGGACGTGAGAGA...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCATTTGTCCTGGAGGATaGTGGTTAATGAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCICPGG*WLMKRL
Trigger: GAGTCTCTTCATTAACCATCATCCTCCAGGACAAAT...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTTCAGCTGAGCAGCACTaGACAGTGTCCGAACGAACC +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGSAEQH*TVSERT
Trigger: GGTTCGTTCGGACACTGTTCAGTGCTGCTCAGCTGA...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTCATTCAGCCGTCAGCTaGGCAGCACTGAACAGTGTC +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGHSAVS*AALNSV
Trigger: GACACTGTTCAGTGCTGCTCAGCTGACGGCTGAATG...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAGCACAAGCACCCATGTaGTCTAGAATGTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAAQAPM*SRMFLG
Trigger: CCCCAAGAACATTCTAGATCACATGGGTGCTTGTGC...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCTACCTATGTGTCAAGTaGTTCATCCTGCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAYLCVK*FILPVK
Trigger: TTTTACTGGCAGGATGAATCACTTGACACATAGGTA...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGCCTCACCTCATGCATaGAGGCACATCCCGATCTTG +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTASPHA*RHIPIL
Trigger: CAAGATCGGGATGTGCCTTCATGCATGAGGTGAGGC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAACTCTGCATCCACCGCTaGGCTCGCCAACTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKLCIHR*ARQLQL
Trigger: TAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAG...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGACATGCCCAGCACTCTaGAGAACTCTCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLTCPAL*RTLTGT
Trigger: TGTCCCTGTGAGAGTTCTGCAGAGTGCTGGGCATGT...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTTATTTGGAAGTCTGCGCCATGGTGGGTACAAACTACATCCCCTGCTCTGTGGTGTATACTTGAGGTTTaGTTGACTGACTGTGCTATC +
Preference number: 4 (lower is better)
Translates to: FIWKSAPWWVQTTSPALWCILEV*LTDCAI
Trigger: GATAGCACAGTCAGTCAACCAAACCTCAAGTATACA...CCACAGAGCAGGGGATGTAGTTTGTACCCACCATGGCGCAGACTTCCAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTAAGTCTGCGCCATGGTaGGTACAAACTACATCCCCT +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTKSAPW*VQTTSP
Trigger: AGGGGATGTAGTTTGTACCCACCATGGCGCAGACTT...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCTTGCAACAATGGACTTaGAAGGAGAGGAATGGATTA +
Preference number: 4 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAALQQWT*KERNGL
Trigger: TAATCCATTCCTCTCCTTCCAAGTCCATTGTTGCAA...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAAAATCAGCTGGGCATaGTGGTGGGTGCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLKISWA*WWVPVI
Trigger: GATCACAGGCACCCACCACCATGCCCAGCTGATTTT...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGTGCTGGCCCGAGGATaGTCTGAAGGATTGAATTCC +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTVLARG*SEGLNS
Trigger: GGAATTCAATCCTTCAGATCATCCTCGGGCCAGCAC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAATCCGTAGTTAAGAGATaGTGGCTGGGGACCACCGGG +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKSVVKR*WLGTTG
Trigger: CCCGGTGGTCCCCAGCCATCATCTCTTAACTACGGA...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAAAGGAAGTGCTGTTGCTaGCAGTGGGGAGAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKRKCCC*QWGERA
Trigger: AGCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCT...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTAGCACAGCCCACTGGTaGGGAAGAAAGCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTSTAHW*GRKLRR
Trigger: TCTTCTGAGCTTTCTTCCTCACCAGTGGGCTGTGCT...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAAAATATGGCCCCAGGTaGGAAGTTACCAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAKYGPR*EVTKSS
Trigger: GCTGCTTTTGGTAACTTCTCACCTGGGGCCATATTT...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAACTCTGCATCCACCGCTaGGCTCGCCAACTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKLCIHR*ARQLQL
Trigger: TAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAG...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTACATGCCCAGCACTCTaGAGAACTCTCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGTCPAL*RTLTGT
Trigger: TGTCCCTGTGAGAGTTCTGCAGAGTGCTGGGCATGT...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGTAGTTCCAGGCACATaGCCAGCACTCTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTVVPGT*PALCRT
Trigger: AGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTAC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAAGGGGTACAAAGAAATaGCTCCTACTCGGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRARGTKK*LLLGSS
Trigger: GGAACTACCGAGTAGGAGCCATTTCTTTGTACCCCT...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTAGGGGTACAAAGAAATaGCTCCTACTCGGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTRGTKK*LLLGSS
Trigger: GGAACTACCGAGTAGGAGCCATTTCTTTGTACCCCT...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAACATTCAGCCGTCAGCTaGGCAGCACTGAACAGTGTC +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKHSAVS*AALNSV
Trigger: GACACTGTTCAGTGCTGCTCAGCTGACGGCTGAATG...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAAGCACAGCCCACTGGTaGGGAAGAAAGCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKSTAHW*GRKLRR
Trigger: TCTTCTGAGCTTTCTTCCTCACCAGTGGGCTGTGCT...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCCATTACATATGCAAGTaGCTCACACTCTTAGATTTC +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCHYICK*LTLLDF
Trigger: GAAATCTAAGAGTGTGAGTCACTTGCATATGTAATG...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGGCCTCCCAGAGACTTaGAAAGGGAAACAACTCAGA +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGGLPET*KGKQLR
Trigger: TCTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCC...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAATTGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACGT +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKLRSGV*DQPGQR
Trigger: ACGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAA...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR GCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAACAAACTACATCCCCTaGTCTGTGGGACCAAAATCA +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRATNYIP*SVGPKS
Trigger: TGATTTTGGTCCCACAGAGCAGGGGATGTAGTTTGT...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAGTAGTTCCAGGCACATaGCCAGCACTCTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKVVPGT*PALCRT
Trigger: AGTTCTGCAGAGTGCTGGGCATGTGCCTGGAACTAC...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCGAGCATCCTTCCATCTaGGTCCCTGTTTTTGATGTG +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLEHPSI*VPVFDV
Trigger: CACATCAAAAACAGGGACCCAGATGGAAGGATGCTC...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTAAGTCTGCGCCATGGTaGGTACAAACTACATCCCCT +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTKSAPW*VQTTSP
Trigger: AGGGGATGTAGTTTGTACCCACCATGGCGCAGACTT...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTTGGAAGTCTGCGCCATaGTGGGTACAAACTACATCC +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGWKSAP*WVQTTS
Trigger: GGATGTAGTTTGTACCCACCATGGCGCAGACTTCCA...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCATTGGAAGGAGAGGAATaGATTAGGCAGGGGTACAAA +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRALEGEE*IRQGYK
Trigger: TTTGTACCCCTGCCTAATCCATTCCTCTCCTTCCAA...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAAAAATCAGCTGGGCATaGTGGTGGGTGCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKKISWA*WWVPVI
Trigger: GATCACAGGCACCCACCACCATGCCCAGCTGATTTT...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAAGGCGGCTCTCAACCTaGTGGCCTCAGTATGATCTT +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKRRLST*WPQYDL
Trigger: AAGATCATACTGAGGCCACCAGGTTGAGAGCCGCCT...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS-3UTR TCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGGGGATTTCGACTTTCTaGGTCCCTTCCATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLGISTF*VPSISK
Trigger: TTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCC...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTCATCTAGGAAAATGGTaGAGCAGGAACTGTATTTCC +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTHLGKW*SRNCIS
Trigger: GGAAATACAGTTCCTGCTCCACCATTTTCCTAGATG...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCGATCAAAATAATACTTaGCATAGACACTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCDQNNT*HRHWKE
Trigger: TTCCTTCCAGTGTCTATGCCAAGTATTATTTTGATC...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTAAGGGTGTACAGAAATaGAACAAGCACAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTKGVQK*NKHSPL
Trigger: CAGTGGGCTGTGCTTGTTCCATTTCTGTACACCCTT...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTAGGGGTACAAAGAAATaGCTCCTACTCGGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTRGTKK*LLLGSS
Trigger: GGAACTACCGAGTAGGAGCCATTTCTTTGTACCCCT...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTTTTTCCAAGCTCACATaGGAAGAAGGTGAAACACAG +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTFSKLT*EEGETQ
Trigger: CTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAA...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTTTGGCTTGGAGTTCTTaGGATTTCGACTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTLAWSS*DFDFLS
Trigger: ACTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAA...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCTCTCTCACGTCCGTCTaGGATTTACTGAGGAATATT +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLSLTSV*DLLRNI
Trigger: AATATTCCTCAGTAAATCTCAGACGGACGTGAGAGA...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCATTTGTCCTGGAGGATaGTGGTTAATGAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLICPGG*WLMKRL
Trigger: GAGTCTCTTCATTAACCATCATCCTCCAGGACAAAT...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGTACTTGAGGTTTGGTTaGCTGACTGTGCTATCATCT +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLYLRFG*LTVLSS
Trigger: AGATGATAGCACAGTCAGTCAACCAAACCTCAAGTA...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCTACTTGAGGTTTGGTTaGCTGACTGTGCTATCATCT +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLYLRFG*LTVLSS
Trigger: AGATGATAGCACAGTCAGTCAACCAAACCTCAAGTA...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGGGATTTCGACTTTCTaGGTCCCTTCCATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTGISTF*VPSISK
Trigger: TTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCATCAAATCTCTTCAGATaGAGCAGTTCTCAGACTGAA +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRASNLFR*SSSQTE
Trigger: TTCAGTCTGAGAACTGCTGCATCTGAAGAGATTTGA...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS-3UTR CCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCATGTATACTTGAGGTTTaGTTGACTGACTGTGCTATC +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRACILEV*LTDCAI
Trigger: GATAGCACAGTCAGTCAACCAAACCTCAAGTATACA...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCTTGGCTTGGAGTTCTTaGGATTTCGACTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLLAWSS*DFDFLS
Trigger: ACTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAA...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGCTAACACTTTTGGCTTaGAGTTCTTGGGATTTCGAC +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLLTLLA*SSWDFD
Trigger: GTCGAAATCCCAAGAACTCCAAGCCAAAAGTGTTAG...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCACAAATCTGTAAAATATaGCCCCAGGTGAGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAQICKI*PQVRSY
Trigger: GTAACTTCTCACCTGGGGCCATATTTTACAGATTTG...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR TCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCCCCACAAAGTCTGACTaGTTTTGTAACAACAACTTC +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLPTKSD*FCNNNF
Trigger: GAAGTTGTTGTTACAAAATCAGTCAGACTTTGTGGG...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTCATTTTTCCCTTCAATaGTCTTCCCACTGGAATACC +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTHFSLQ*SSHWNT
Trigger: GGTATTCCAGTGGGAAGATCATTGAAGGGAAAAATG...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTCATTACATATGCAAGTaGCTCACACTCTTAGATTTC +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTHYICK*LTLLDF
Trigger: GAAATCTAAGAGTGTGAGTCACTTGCATATGTAATG...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAACAAAGCATGTTTCATTaGGAGCAGGCAATGTTTGGG +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKQSMFH*EQAMFG
Trigger: CCCAAACATTGCCTGCTCTCAATGAAACATGCTTTG...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAAGTCTAAACAAGACTTaGGTCTGGTTTTATGGAATC +
Preference number: 4 (lower is better)
Translates to: GFRLSESLPFPKHVSLRASLNKT*VWFYGI
Trigger: GATTCCATAAAACCAGACTCAAGTCTTGTTTAGACT...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGTACCTATGTGTCAAGTaGTTCATCCTGCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLYLCVK*FILPVK
Trigger: TTTTACTGGCAGGATGAATCACTTGACACATAGGTA...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGGAACTGTATTTCCTTaGTATTTGTCCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTGTVFP*YLSWRM
Trigger: CATCCTCCAGGACAAATAGCAAGGAAATACAGTTCC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAACAGGTTGTTCGCTTCTaGCAGAGAACGAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKQVVRF*QRTKIK
Trigger: TTTGATCTTCGTTCTCTGGCAGAAGCGAACAACCTG...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTCATCTAGGAAAATGGTaGAGCAGGAACTGTATTTCC +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGHLGKW*SRNCIS
Trigger: GGAAATACAGTTCCTGCTCCACCATTTTCCTAGATG...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTTATCATCTAGGAAAATaGTGGAGCAGGAACTGTATT +
Preference number: 4 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTYHLGK*WSRNCI
Trigger: AATACAGTTCCTGCTCCACCATTTTCCTAGATGATA...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAAGAGCATCCTTCCATCTaGGTCCCTGTTTTTGATGTG +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKEHPSI*VPVFDV
Trigger: CACATCAAAAACAGGGACCCAGATGGAAGGATGCTC...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCTTTGTCATAATCTGGTaGCACTTCGGATTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLFVIIW*HFGFRK
Trigger: CTTTCGAAATCCGAAGTGCCACCAGATTATGACAAA...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGTGTTTGTCATAATCTaGTGGCACTTCGGATTTCGA +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGVFVII*WHFGFR
Trigger: TCGAAATCCGAAGTGCCACCAGATTATGACAAACAC...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCAATCTGCTTCTGCTCTaGGTTGTGTTTGTCATAATC +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLNLLLL*VVFVII
Trigger: GATTATGACAAACACAACCCAGAGCAGAAGCAGATT...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAAAAGGGTGTACAGAAATaGAACAAGCACAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKKGVQK*NKHSPL
Trigger: CAGTGGGCTGTGCTTGTTCCATTTCTGTACACCCTT...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGTTGCAACAATGGACTTaGAAGGAGAGGAATGGATTA +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLLQQWT*KERNGL
Trigger: TAATCCATTCCTCTCCTTCCAAGTCCATTGTTGCAA...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTTTTTCCAAGCTCACATaGGAAGAAGGTGAAACACAG +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTFSKLT*EEGETQ
Trigger: CTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAA...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTCTAACACTTTTGGCTTaGAGTTCTTGGGATTTCGAC +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTLTLLA*SSWDFD
Trigger: GTCGAAATCCCAAGAACTCCAAGCCAAAAGTGTTAG...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
3UTR CAA 72 bp CTGACACAAATTTCACTAAAACCTAACACTTTTGGCTaGGAGTTCTTGGGATTTCGACTTTCTGAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LTQISLKPNTFG*EFLGFRLSESL
Trigger: AAGGGACTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAAAAGTGTTAGGTTTTAGTGAAATTTGTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAATACTTGAGGTTTGGTTaGCTGACTGTGCTATCATCT +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKYLRFG*LTVLSS
Trigger: AGATGATAGCACAGTCAGTCAACCAAACCTCAAGTA...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCTCTAAGCACCCACAATaGAAATGCAAGTTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLSKHPQ*KCKLSF
Trigger: AAAACTCAACTTGCATTTTCATTGTGGGTGCTTAGA...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAACAAAGCATGTTTCATTaGGAGCAGGCAATGTTTGGG +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKQSMFH*EQAMFG
Trigger: CCCAAACATTGCCTGCTCTCAATGAAACATGCTTTG...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTTACCTATGTGTCAAGTaGTTCATCCTGCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTYLCVK*FILPVK
Trigger: TTTTACTGGCAGGATGAATCACTTGACACATAGGTA...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCTATCATCTAGGAAAATaGTGGAGCAGGAACTGTATT +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLYHLGK*WSRNCI
Trigger: AATACAGTTCCTGCTCCACCATTTTCCTAGATGATA...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGTATCATCTAGGAAAATaGTGGAGCAGGAACTGTATT +
Preference number: 4 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLYHLGK*WSRNCI
Trigger: AATACAGTTCCTGCTCCACCATTTTCCTAGATGATA...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTAATCTGCTTCTGCTCTaGGTTGTGTTTGTCATAATC +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGNLLLL*VVFVII
Trigger: GATTATGACAAACACAACCCAGAGCAGAAGCAGATT...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAATTGGAAGGAGAGGAATaGATTAGGCAGGGGTACAAA +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKLEGEE*IRQGYK
Trigger: TTTGTACCCCTGCCTAATCCATTCCTCTCCTTCCAA...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAATTTTCCAAGCTCACATaGGAAGAAGGTGAAACACAG +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKFSKLT*EEGETQ
Trigger: CTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAA...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR TCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTCTGGGTCCCTGTTTTTaGTGTGATAATATATTGCAA +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGLGPCF*CDNILQ
Trigger: TTGCAATATATTATCACATCAAAAACAGGGACCCAG...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTTCACTCCCCAAATTTTaGTTTCAGCTTAGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGSLPKF*FQLSLK
Trigger: CTTTAAGCTAAGCTGAAAGCAAAATTTGGGGAGTGA...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAACATCTAGGAAAATGGTaGAGCAGGAACTGTATTTCC +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKHLGKW*SRNCIS
Trigger: GGAAATACAGTTCCTGCTCCACCATTTTCCTAGATG...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAAGTGTTTGTCATAATCTaGTGGCACTTCGGATTTCGA +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKVFVII*WHFGFR
Trigger: TCGAAATCCGAAGTGCCACCAGATTATGACAAACAC...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAAATCTGCTTCTGCTCTaGGTTGTGTTTGTCATAATC +
Preference number: 4 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKNLLLL*VVFVII
Trigger: GATTATGACAAACACAACCCAGAGCAGAAGCAGATT...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCGATCAAAATAATACTTaGCATAGACACTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLDQNNT*HRHWKE
Trigger: TTCCTTCCAGTGTCTATGCCAAGTATTATTTTGATC...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAATTGGCTTGGAGTTCTTaGGATTTCGACTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKLAWSS*DFDFLS
Trigger: ACTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAA...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR GCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAATGGCCCAAACAGGTATaGTTATACCTGACACAAATT +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKWPKQV*LYLTQI
Trigger: AATTTGTGTCAGGTATAAGCATACCTGTTTGGGCCA...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CCA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAATTTGTCATAATCTGGTaGCACTTCGGATTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKFVIIW*HFGFRK
Trigger: CTTTCGAAATCCGAAGTGCCACCAGATTATGACAAA...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCCGGGGCAGAGTCAGGTaGTCTGCACTGGCTGAGCGC +
Preference number: 5 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPRGRVR*SALAER
Trigger: GCGCTCAGCCAGTGCAGACAACCTGACTCTGCCCCG...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCGCCCAGATCGCACCATaGCACACCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPAQIAP*HTSLGD
Trigger: GTCACCCAGGCTGGTGTGCAATGGTGCGATCTGGGC...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS TCA 90 bp ACTAAGGGATGGTGTGGCCTCCGGCGGGCCTCCGTAGTTAAGAGATaGTGGCTGGGGACCACCGGGGCAGAGTCAGGTTGTCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: TKGWCGLRRASVVKR*WLGTTGAESGCLHW
Trigger: CCAGTGCAGACAACCTGACTCTGCCCCGGTGGTCCCCAGCCATCATCTCTTAACTACGGAGGCCCGCCGGAGGCCACACCATCCCTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCGCTCATCCAGGCAGCTaGACGGAGCTATGCGTAAAA +
Preference number: 5 (lower is better)
Translates to: VQPALHPPLRSPTSATAPAHPGS*TELCVK
Trigger: TTTTACGCATAGCTCCGTCAAGCTGCCTGGATGAGC...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGACGAAGGAAGTGCTGTaGCTGACAGTGGGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGTKEVL*LTVGRA
Trigger: CGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGT...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCGGGGCAGAGTCAGGTaGTCTGCACTGGCTGAGCGC +
Preference number: 5 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSRGRVR*SALAER
Trigger: GCGCTCAGCCAGTGCAGACAACCTGACTCTGCCCCG...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCACGAAGGAAGTGCTGTaGCTGACAGTGGGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPTKEVL*LTVGRA
Trigger: CGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGT...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGCTGAGGCAGAATTGCTaGAATCCGGGAAGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGLRQNC*NPGSGG
Trigger: ACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGCGGGGCAGAGTCAGGTaGTCTGCACTGGCTGAGCGC +
Preference number: 5 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVRGRVR*SALAER
Trigger: GCGCTCAGCCAGTGCAGACAACCTGACTCTGCCCCG...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGGATCTTCTTAGGTCCTaGTACTTGTCCTCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGDLLRS*YLSSQR
Trigger: CCTCTGCGAGGACAAGTACAAGGACCTAAGAAGATC...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCCCTAACACTTTTGGCTaGGAGTTCTTGGGATTTCGA +
Preference number: 5 (lower is better)
Translates to: VQPALHPPLRSPTSATAPPNTFG*EFLGFR
Trigger: TCGAAATCCCAAGAACTCCAAGCCAAAAGTGTTAGG...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCTTAATGAAGAGACTCTaGCGTTTTTCTCTCACGTCC +
Preference number: 5 (lower is better)
Translates to: VQPALHPPLRSPTSATAPLMKRL*RFSLTS
Trigger: GGACGTGAGAGAAAAACGCAAGAGTCTCTTCATTAA...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGTGGTCATCCCACACCTaGGAGGCCAGCAGGATCGCC +
Preference number: 5 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLWSSHT*EASRIA
Trigger: GGCGATCCTGCTGGCCTCCAAGGTGTGGGATGACCA...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATCTTAGGTCCTTGTACTaGTCCTCGCAGAGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDLRSLY*SSQRRE
Trigger: CTCTCGCCTCTGCGAGGACAAGTACAAGGACCTAAG...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCTGAGGCAGAATTGCTaGAATCCGGGAAGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHLRQNC*NPGSGG
Trigger: ACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp GTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACCGCCCCCTTAATGAAGAGACTCTaGCGTTTTTCTCTCACGTCT +
Preference number: 5 (lower is better)
Translates to: VQPALHPPLRSPTSATAPLMKRL*RFSLTS
Trigger: AGACGTGAGAGAAAAACGCAAGAGTCTCTTCATTAA...GGGGGCGGTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339497.7
CDS-3UTR CAA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGATACTTGAGGTTTGGTaGACTGACTGTGCTATCATC +
Preference number: 5 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGILEVW*TDCAII
Trigger: GATGATAGCACAGTCAGTCAACCAAACCTCAAGTAT...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCACAATCCGCTTCCAGTaGGCCGGACAGATATCTATC +
Preference number: 5 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASTIRFQ*AGQISI
Trigger: GATAGATATCTGTCCGGCCAACTGGAAGCGGATTGT...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCTGGTCATCCCACACCTaGGAGGCCAGCAGGATCGCC +
Preference number: 5 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAAWSSHT*EASRIA
Trigger: GGCGATCCTGCTGGCCTCCAAGGTGTGGGATGACCA...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GCCCTGGGTGCAGCCAGCTCTGCATCCACCGCTGCGCTCGCCAACTTCAGCTACGAAGGAACATTGATGTaGAACTGCAGCAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: ALGAASSASTAALANFSYEGTLM*NCSNSR
Trigger: TCTTGAATTGCTGCAGTTCAACATCAATGTTCCTTC...GTAGCTGAAGTTGGCGAGCGCAGCGGTGGATGCAGAGCTGGCTGCACCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp CGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACCATTGCACACCAGCCTGGGACACTGGAAGGAACATaGATGTTGAACTGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: REVGVAVSPDRTIAHQPGTLEGT*MLNCSN
Trigger: ATTGCTGCAGTTCAACATCAATGTTCCTTCCAGTGT...CCCAGGCTGGTGTGCAATGGTGCGATCTGGGCTCACTGCAACCCCCACTTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCAAGGGAAAGCTCAGGTaGTTCGCTTCTGCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASKGKLR*FASARE
Trigger: TTCTCTGGCAGAAGCGAACAACCTGAGCTTTCCCTT...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCTGGCCTCCCAGAGACTaGAAAAGGGAAACAACTCAG +
Preference number: 5 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASWPPRD*KRETTQ
Trigger: CTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCCA...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GAGAGCAGGCAGACAGGAAAGCCAGCCCAGAAGAGGAGGCAGGTACAGGTGCCCTTTGGCTTGGAGTTCTaGGGATTTCGACTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: ESRQTGKPAQKRRQVQVPFGLEF*GFRLSE
Trigger: CTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAAA...GGGCACCTGTACCTGCCTCCTCTTCTGGGCTGGCTTTCCTGTCTGCCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACAGGCACATCCCGATCTaGGCAGGATTTCTCATCTGC +
Preference number: 5 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHRHIPI*AGFLIC
Trigger: GCAGATGAGAAATCCTGCCAAGATCGGGATGTGCCT...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACACAATCCGCTTCCAGTaGGCCGGACAGATATCTATC +
Preference number: 5 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHTIRFQ*AGQISI
Trigger: GATAGATATCTGTCCGGCCAACTGGAAGCGGATTGT...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGGTCATCCCACACCTaGGAGGCCAGCAGGATCGCC +
Preference number: 5 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCWSSHT*EASRIA
Trigger: GGCGATCCTGCTGGCCTCCAAGGTGTGGGATGACCA...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATAAGGGAAAGCTCAGGTaGTTCGCTTCTGCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDKGKLR*FASARE
Trigger: TTCTCTGGCAGAAGCGAACAACCTGAGCTTTCCCTT...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGGATCTTCTTAGGTCCTaGTACTTGTCCTCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: VPVILATREAEAELLESGDLLRS*YLSSQR
Trigger: CCTCTGCGAGGACAAGTACAAGGACCTAAGAAGATC...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATGATCTTCTTAGGTCCTaGTACTTGTCCTCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDDLLRS*YLSSQR
Trigger: CCTCTGCGAGGACAAGTACAAGGACCTAAGAAGATC...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGTGGCCTCCCAGAGACTaGAAAAGGGAAACAACTCAG +
Preference number: 5 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSWPPRD*KRETTQ
Trigger: CTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCCA...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTCCCGCGCTTCCCCAGTaGGTGTCCGCTTCCCCGGCG +
Preference number: 5 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTPALPQ*VSASPA
Trigger: CGCCGGGGAAGCGGACACCAACTGGGGAAGCGCGGG...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374704.8
CDS-3UTR CAA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCTTAATGAAGAGACTCTaGCGTTTTTCTCTCACGTCC +
Preference number: 5 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASLMKRL*RFSLTS
Trigger: GGACGTGAGAGAAAAACGCAAGAGTCTCTTCATTAA...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGGGGAAAGGGATACTTTaGGTTCAGCACTACAGTCAA +
Preference number: 5 (lower is better)
Translates to: VPVILATREAEAELLESGGKGIL*VQHYSQ
Trigger: TTGACTGTAGTGCTGAACCAAAAGTATCCCTTTCCC...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGGGGAAAGGGATACTTTaGGTTCAGCACTACAGTCAA +
Preference number: 5 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSGKGIL*VQHYSQ
Trigger: TTGACTGTAGTGCTGAACCAAAAGTATCCCTTTCCC...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGCTTGCAACAATGGACTaGGAAGGAGAGGAATGGATT +
Preference number: 5 (lower is better)
Translates to: VPVILATREAEAELLESGLATMD*EGEEWI
Trigger: AATCCATTCCTCTCCTTCCAAGTCCATTGTTGCAAG...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGTGGCCTCCCAGAGACTaGAAAAGGGAAACAACTCAG +
Preference number: 5 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLWPPRD*KRETTQ
Trigger: CTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCCA...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGAGAGCAGGCAATGTTaGGGGATCAGGTGTATGATT +
Preference number: 5 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVESRQC*GIRCMI
Trigger: AATCATACACCTGATCCCCAAACATTGCCTGCTCTC...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp CACAGGGACACCCTCTGCTGCACCGTGTCCTTCAGCCCACAAAGTCTGACTGATCCTAACACTTTTGGCTaGGAGTTCTTGGGATTTCGA +
Preference number: 5 (lower is better)
Translates to: HRDTLCCTVSFSPQSLTDPNTFG*EFLGFR
Trigger: TCGAAATCCCAAGAACTCCAAGCCAAAAGTGTTAGG...ATCAGTCAGACTTTGTGGGCTGAAGGACACGGTGCAGCAGAGGGTGTCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp AGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGCACAGGAACTGTATTTCCTaGCTATTTGTCCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: RQNCLNPGSGGCSEPRSHRNCIS*LFVLED
Trigger: ATCCTCCAGGACAAATAGCAAGGAAATACAGTTCCT...GTGCGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp CTGAGGCAGAATTGCTTGAATCCGGGAAGTGGGGGTTGCAGTGAGCCCAGATCGATACTTGAGGTTTGGTaGACTGACTGTGCTATCATC +
Preference number: 5 (lower is better)
Translates to: LRQNCLNPGSGGCSEPRSILEVW*TDCAII
Trigger: GATGATAGCACAGTCAGTCAACCAAACCTCAAGTAT...CGATCTGGGCTCACTGCAACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp TTTATTTGGAAGTCTGCGCCATGGTGGGTACAAACTACATCCCCTGCTCTGTGGGCTCATCCAGGCAGCTaGACGGAGCTATGCGTAAAA +
Preference number: 5 (lower is better)
Translates to: FIWKSAPWWVQTTSPALWAHPGS*TELCVK
Trigger: TTTTACGCATAGCTCCGTCAAGCTGCCTGGATGAGC...CCACAGAGCAGGGGATGTAGTTTGTACCCACCATGGCGCAGACTTCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GTGCCTGTGATCCTAGCTACTCGGGAGGCTGAGGCAGAATTGCTTGAATCCGGGAGAGAGAAGGTGATTTaGGTACCCATACAGAGTAGA +
Preference number: 5 (lower is better)
Translates to: VPVILATREAEAELLESGREKVI*VPIQSR
Trigger: TCTACTCTGTATGGGTACCAAAATCACCTTCTCTCT...CCCGGATTCAAGCAATTCTGCCTCAGCCTCCCGAGTAGCTAGGATCACAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp CAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCTGCCAGGCACATCCCGATCTaGGCAGGATTTCTCATCTGC +
Preference number: 5 (lower is better)
Translates to: QSFPSSHGKKVKHRPAAARHIPI*AGFLIC
Trigger: GCAGATGAGAAATCCTGCCAAGATCGGGATGTGCCT...GGCAGCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAGCCCAGATCGCACCATaGCACACCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAAQIAP*HTSLGD
Trigger: GTCACCCAGGCTGGTGTGCAATGGTGCGATCTGGGC...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGACACTGGAAGGAACATaGATGTTGAACTGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVTLEGT*MLNCSN
Trigger: ATTGCTGCAGTTCAACATCAATGTTCCTTCCAGTGT...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGTTTGGCTTGGAGTTCTaGGGATTTCGACTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLFGLEF*GFRLSE
Trigger: CTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAAA...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGGGAGAGCGAGCAATTACCTAGAGAGCTaGTTTAACAGGTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ESTSSTKEVLLLTVGRASNYLES*FNRFSN
Trigger: GTTTGAGAACCTGTTAAACAAGCTCTCTAGGTAATT...GCTCGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374706.5
CDS CCA 90 bp GGAAGCTTCTGTGTATACAGTGCTTCCCACTTTTCTTCCTTTTTCTaGAGGGCCTCTTCAGATGCAGCAGTTCTCAGACTGAACGTGCAC +
Preference number: 5 (lower is better)
Translates to: GSFCVYSASHFSSFF*RASSDAAVLRLNVH
Trigger: GTGCACGTTCAGTCTGAGAACTGCTGCATCTGAAGAGGCCCTCCAGAAAAAGGAAGAAAAGTGGGAAGCACTGTATACACAGAAGCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS-3UTR CAA 90 bp GGTACAAAGAAATGGCTCCTACTCGGTAGTTCCAGGCACATGCCCAGCACTCTGGTATTTCCTTGCTATTaGTCCTGGAGGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: GTKKWLLLGSSRHMPSTLVFPCY*SWRMMV
Trigger: AACCATCATCCTCCAGGACAAATAGCAAGGAAATAC...CAGAGTGCTGGGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCACAATCCGCTTCCAGTaGGCCGGACAGATATCTATC +
Preference number: 5 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCTIRFQ*AGQISI
Trigger: GATAGATATCTGTCCGGCCAACTGGAAGCGGATTGT...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTTGGTCATCCCACACCTaGGAGGCCAGCAGGATCGCC +
Preference number: 5 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTWSSHT*EASRIA
Trigger: GGCGATCCTGCTGGCCTCCAAGGTGTGGGATGACCA...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp CCTCCAGGATTCGAGTCCACTTCCTCCACGAAGGAAGTGCTGTTGCTGACAGTGGAAGGAACATTGATGTaGAACTGCAGCAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: PPGFESTSSTKEVLLLTVEGTLM*NCSNSR
Trigger: TCTTGAATTGCTGCAGTTCAACATCAATGTTCCTTC...CACTGTCAGCAACAGCACTTCCTTCGTGGAGGAAGTGGACTCGAATCCTGGAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCAAGGGAAAGCTCAGGTaGTTCGCTTCTGCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCKGKLR*FASARE
Trigger: TTCTCTGGCAGAAGCGAACAACCTGAGCTTTCCCTT...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGCCCAGATCGCACCATaGCACACCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTAQIAP*HTSLGD
Trigger: GTCACCCAGGCTGGTGTGCAATGGTGCGATCTGGGC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS CCA 90 bp AGCACTGAACAGTGTCCGAACGAACCGGTAAATCTGCTTCTGCTCTaGGTTGTGTTTGTCATAATCTGGTGGCACTTCGGATTTCGAAAG +
Preference number: 5 (lower is better)
Translates to: STEQCPNEPVNLLLL*VVFVIIWWHFGFRK
Trigger: CTTTCGAAATCCGAAGTGCCACCAGATTATGACAAACACAACCCAGAGCAGAAGCAGATTTACCGGTTCGTTCGGACACTGTTCAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
ENST00000492478.5
CDS-3UTR CAA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCACTTAGGTCCTTGTACTaGTCCTCGCAGAGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: GFRLSESLPFPKHVSLRALRSLY*SSQRRE
Trigger: CTCTCGCCTCTGCGAGGACAAGTACAAGGACCTAAG...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTGAGGCTGAGGCAGAATaGCTTGAATCCGGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTEAEAE*LESGKW
Trigger: CCACTTCCCGGATTCAAGCAATTCTGCCTCAGCCTC...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS GCA 90 bp CCGCCTTCATGCTACATGTCACTGGTTTTTAATACCCTCTTCAGATaGAGCAGTTCTCAGACTGAACGTGCACAGAATTACCTAGAGAGC +
Preference number: 5 (lower is better)
Translates to: PPSCYMSLVFNTLFR*SSSQTERAQNYLES
Trigger: GCTCTCTAGGTAATTCTGTGCACGTTCAGTCTGAGAACTGCTGCATCTGAAGAGGGTATTAAAAACCAGTGACATGTAGCATGAAGGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493157.6
CDS GCA 90 bp GAGCCTTTGTGGGTAAAAACCAAAGCCACAATGAACGTCCACATCTaGATCACATTAGCAATATGGGCCTCATCCGCCTTCATGCTACAT +
Preference number: 5 (lower is better)
Translates to: EPLWVKTKATMNVHI*ITLAIWASSAFMLH
Trigger: ATGTAGCATGAAGGCGGATGAGGCCCATATTGCTAATGTGATGCAGATGTGGACGTTCATTGTGGCTTTGGTTTTTACCCACAAAGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493157.6
CDS CCA 90 bp AGCACTGAACAGTGTCCGAACGAACCGGTAAATCTGCTTCTGCTCTaGGTTGTGTTTGTCATAATCTGGTGGCACTTCGGATTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: STEQCPNEPVNLLLL*VVFVIIWWHFGFLF
Trigger: AAACAGAAATCCGAAGTGCCACCAGATTATGACAAACACAACCCAGAGCAGAAGCAGATTTACCGGTTCGTTCGGACACTGTTCAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465416.5
CDS-3UTR CAA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGCTTAGGTCCTTGTACTaGTCCTCGCAGAGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLLRSLY*SSQRRE
Trigger: CTCTCGCCTCTGCGAGGACAAGTACAAGGACCTAAG...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTACGAAGGAAGTGCTGTaGCTGACAGTGGGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTTKEVL*LTVGRA
Trigger: CGCTCTCCCCACTGTCAGCAACAGCACTTCCTTCGT...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGGCTCATCCAGGCAGCTaGACGGAGCTATGCGTAAAA +
Preference number: 5 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLAHPGS*TELCVK
Trigger: TTTTACGCATAGCTCCGTCAAGCTGCCTGGATGAGC...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCGCTCATCCAGGCAGCTaGACGGAGCTATGCGTAAAA +
Preference number: 5 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLAHPGS*TELCVK
Trigger: TTTTACGCATAGCTCCGTCAAGCTGCCTGGATGAGC...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCAGAGAGAAGGTGATTTaGGTACCCATACAGAGTAGA +
Preference number: 5 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCREKVI*VPIQSR
Trigger: TCTACTCTGTATGGGTACCAAAATCACCTTCTCTCT...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAGGCTGAGGCAGAATaGCTTGAATCCGGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGEAEAE*LESGKW
Trigger: CCACTTCCCGGATTCAAGCAATTCTGCCTCAGCCTC...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS TCA 90 bp CAGGAGGAGATAACTGCAGTCTTACATCAGCCATACTCGTATCCATaGAATATGAGTCAGTCATTTGCACAACTCCCTGAGTCACCTTCT +
Preference number: 5 (lower is better)
Translates to: QEEITAVLHQPYSYP*NMSQSFAQLPESPS
Trigger: AGAAGGTGACTCAGGGAGTTGTGCAAATGACTGACTCATATTTCATGGATACGAGTATGGCTGATGTAAGACTGCAGTTATCTCCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS CCA 90 bp CACTGCCTCAACCTCCTCCAAAGTGTAGAGTTCATAGCTTTTCCTTaGGAAGCTTCTGTGTATACAGTGCTTCCCACTTTTCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: HCLNLLQSVEFIAFP*EASVYTVLPTFLPF
Trigger: AAAAGGAAGAAAAGTGGGAAGCACTGTATACACAGAAGCTTCCCAAGGAAAAGCTATGAACTCTACACTTTGGAGGAGGTTGAGGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS-3UTR CAA 90 bp ATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGAAACACAGACCTGCTGCGAAGGAACATTGATGTaGAACTGCAGCAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: MPKFSKLTWEEGETQTCCEGTLM*NCSNSR
Trigger: TCTTGAATTGCTGCAGTTCAACATCAATGTTCCTTC...GCAGCAGGTCTGTGTTTCACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAACTTAGGTCCTTGTACTaGTCCTCGCAGAGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKLRSLY*SSQRRE
Trigger: CTCTCGCCTCTGCGAGGACAAGTACAAGGACCTAAG...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGTGGCCTCCCAGAGACTaGAAAAGGGAAACAACTCAG +
Preference number: 5 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLWPPRD*KRETTQ
Trigger: CTGAGTTGTTTCCCTTTTCAAGTCTCTGGGAGGCCA...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAGAGAGCAGGCAATGTTaGGGGATCAGGTGTATGATT +
Preference number: 5 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAESRQC*GIRCMI
Trigger: AATCATACACCTGATCCCCAAACATTGCCTGCTCTC...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTACAATCCGCTTCCAGTaGGCCGGACAGATATCTATC +
Preference number: 5 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGTIRFQ*AGQISI
Trigger: GATAGATATCTGTCCGGCCAACTGGAAGCGGATTGT...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCACTTGCAACAATGGACTaGGAAGGAGAGGAATGGATT +
Preference number: 5 (lower is better)
Translates to: GFRLSESLPFPKHVSLRALATMD*EGEEWI
Trigger: AATCCATTCCTCTCCTTCCAAGTCCATTGTTGCAAG...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCGAGAGCAGGCAATGTTaGGGGATCAGGTGTATGATT +
Preference number: 5 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLESRQC*GIRCMI
Trigger: AATCATACACCTGATCCCCAAACATTGCCTGCTCTC...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAACTGAGGCAGAATTGCTaGAATCCGGGAAGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKLRQNC*NPGSGG
Trigger: ACCCCCACTTCCCGGATTCAAGCAATTCTGCCTCAG...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS-3UTR CAA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAAGAGGCTGAGGCAGAATaGCTTGAATCCGGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKEAEAE*LESGKW
Trigger: CCACTTCCCGGATTCAAGCAATTCTGCCTCAGCCTC...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
CDS CCA 90 bp ATGATCAATGTGACCACATGCATCTCTGGTACTCAGATGATGTATTaGCAACACTGCACCACAAAACGCTGTTTTAAACCATCTTACCTC +
Preference number: 5 (lower is better)
Translates to: MINVTTCISGTQMMY*QHCTTKRCFKPSYL
Trigger: GAGGTAAGATGGTTTAAAACAGCGTTTTGTGGTGCAGTGTTGCCAATACATCATCTGAGTACCAGAGATGCATGTGGTCACATTGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497692.1
CDS-3UTR CAA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTAGGAACTGTATTTCCTaGCTATTTGTCCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTRNCIS*LFVLED
Trigger: ATCCTCCAGGACAAATAGCAAGGAAATACAGTTCCT...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAAGGAACTGTATTTCCTaGCTATTTGTCCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: GFRLSESLPFPKHVSLRARNCIS*LFVLED
Trigger: ATCCTCCAGGACAAATAGCAAGGAAATACAGTTCCT...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTATACTTGAGGTTTGGTaGACTGACTGTGCTATCATC +
Preference number: 5 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTILEVW*TDCAII
Trigger: GATGATAGCACAGTCAGTCAACCAAACCTCAAGTAT...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTACACTGGAAGGAACATaGATGTTGAACTGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTTLEGT*MLNCSN
Trigger: ATTGCTGCAGTTCAACATCAATGTTCCTTCCAGTGT...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCAAGAGAGAAGGTGATTTaGGTACCCATACAGAGTAGA +
Preference number: 5 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAREKVI*VPIQSR
Trigger: TCTACTCTGTATGGGTACCAAAATCACCTTCTCTCT...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GGGGATCAGGTGTATGATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCTTAATGAAGAGACTCTaGCGTTTTTCTCTCACGTCC +
Preference number: 5 (lower is better)
Translates to: GDQVYDSRLIKMPKFSKLLMKRL*RFSLTS
Trigger: GGACGTGAGAGAAAAACGCAAGAGTCTCTTCATTAA...GAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATCATACACCTGATCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265375.13
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GAGGTAGAATCCAGGGCACAGGCTAAAACAGTATTCAGTAGTCTAAACAAGACTGAAGGAACATTGATGTaGAACTGCAGCAATTCAAGA +
Preference number: 5 (lower is better)
Translates to: EVESRAQAKTVFSSLNKTEGTLM*NCSNSR
Trigger: TCTTGAATTGCTGCAGTTCAACATCAATGTTCCTTC...AGTCTTGTTTAGACTACTGAATACTGTTTTAGCCTGTGCCCTGGATTCTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAAGATCTTCTTAGGTCCTaGTACTTGTCCTCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKDLLRS*YLSSQR
Trigger: CCTCTGCGAGGACAAGTACAAGGACCTAAGAAGATC...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GATTCAAGACTAATTAAGATGCCAAAGTTTTCCAAGCTCACATGGGAAGAAGGTGGGAAAGGGATACTTTaGGTTCAGCACTACAGTCAA +
Preference number: 5 (lower is better)
Translates to: DSRLIKMPKFSKLTWEEGGKGIL*VQHYSQ
Trigger: TTGACTGTAGTGCTGAACCAAAAGTATCCCTTTCCC...ACCTTCTTCCCATGTGAGCTTGGAAAACTTTGGCATCTTAATTAGTCTTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTTTTGGCTTGGAGTTCTaGGGATTTCGACTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTFGLEF*GFRLSE
Trigger: CTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAAA...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGAGAAGGTGATTTaGGTACCCATACAGAGTAGA +
Preference number: 5 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLREKVI*VPIQSR
Trigger: TCTACTCTGTATGGGTACCAAAATCACCTTCTCTCT...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTGTATTTCCTTGCTATTaGTCCTGGAGGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTVFPCY*SWRMMV
Trigger: AACCATCATCCTCCAGGACAAATAGCAAGGAAATAC...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp GGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGAGAGCACAGTCAATTTCGCCATaGTTGAAGAAAAACGGTATA +
Preference number: 5 (lower is better)
Translates to: GFRLSESLPFPKHVSLRAQSISP*LKKNGI
Trigger: TATACCGTTTTTCTTCAACAATGGCGAAATTGACTG...TGCTCTCAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAAGAGAGCAGGCAATGTTaGGGGATCAGGTGTATGATT +
Preference number: 5 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKESRQC*GIRCMI
Trigger: AATCATACACCTGATCCCCAAACATTGCCTGCTCTC...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAATTTGGCTTGGAGTTCTaGGGATTTCGACTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKFGLEF*GFRLSE
Trigger: CTCAGAAAGTCGAAATCCCAAGAACTCCAAGCCAAA...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS TCA 90 bp CCATCACAGACAGTTATTTTAGCTCTTTACACTGTACAGTCATTATaGAGAACACAGGGAGACAGCTTCACTTACATGGTTAATGAAGAG +
Preference number: 5 (lower is better)
Translates to: PSQTVILALYTVQSL*RTQGDSFTYMVNEE
Trigger: CTCTTCATTAACCATGTAAGTGAAGCTGTCTCCCTGTGTTCTTCATAATGACTGTACAGTGTAAAGAGCTAAAATAACTGTCTGTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470025.1
CDS-3UTR CAA 90 bp AACCTCAAGTATCTACCTATGTGTCAAGTGATTCATCCTGCCAGTAAAACTAAAAGGAACTGTATTTCCTaGCTATTTGTCCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: NLKYLPMCQVIHPASKTKRNCIS*LFVLED
Trigger: ATCCTCCAGGACAAATAGCAAGGAAATACAGTTCCT...TTTAGTTTTACTGGCAGGATGAATCACTTGACACATAGGTAGATACTTGAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TTCTTGGGATTTCGACTTTCTGAGTCCCTTCCATTTCCAAAGCATGTTTCATTGCAGTCAATTTCGCCATaGTTGAAGAAAAACGGTATA +
Preference number: 5 (lower is better)
Translates to: FLGFRLSESLPFPKHVSLQSISP*LKKNGI
Trigger: TATACCGTTTTTCTTCAACAATGGCGAAATTGACTG...CAATGAAACATGCTTTGGAAATGGAAGGGACTCAGAAAGTCGAAATCCCAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAAATACTTGAGGTTTGGTaGACTGACTGTGCTATCATC +
Preference number: 5 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKILEVW*TDCAII
Trigger: GATGATAGCACAGTCAGTCAACCAAACCTCAAGTAT...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TTTTGGTTCAGCACTACAGTCAATTTCGCCATTGTTGAAGAAAAACGGTATAAAACACTGGAAGGAACATaGATGTTGAACTGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: FWFSTTVNFAIVEEKRYKTLEGT*MLNCSN
Trigger: ATTGCTGCAGTTCAACATCAATGTTCCTTCCAGTGT...TTTATACCGTTTTTCTTCAACAATGGCGAAATTGACTGTAGTGCTGAACCAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS-3UTR CAA 90 bp TACGGCAGCAGAACCTCTTTCCTGAAATGGATTGGTAAAATAAGATACTTCACTCAGTCAATTTCGCCATaGTTGAAGAAAAACGGTATA +
Preference number: 5 (lower is better)
Translates to: YGSRTSFLKWIGKIRYFTQSISP*LKKNGI
Trigger: TATACCGTTTTTCTTCAACAATGGCGAAATTGACTG...AGTGAAGTATCTTATTTTACCAATCCATTTCAGGAAAGAGGTTCTGCTGCCGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS GCA 72 bp CGCGCTTCCCCAGTTGGTGTCCGCTTCCCCGGCGGCTaGGGCGACGGCGGCCGCCTCGGCAAGAGGTTCCGG +
Preference number: 6 (lower is better)
Translates to: RASPVGVRFPGG*GDGGRLGKRFR
Trigger: CCGGAACCTCTTGCCGAGGCGGCCGCCGTCGCCGCAGCCGCCGGGGAAGCGGACACCAACTGGGGAAGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374704.8
CDS TCA 72 bp TGGTGTGGCCTCCGGCGGGCCTCCGTAGTTAAGAGATaGTGGCTGGGGACCACCGGGGCAGAGTCAGGTTGT +
Preference number: 6 (lower is better)
Translates to: WCGLRRASVVKR*WLGTTGAESGC
Trigger: ACAACCTGACTCTGCCCCGGTGGTCCCCAGCCATCATCTCTTAACTACGGAGGCCCGCCGGAGGCCACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS CCA 72 bp CTGGGGACCACCGGGGCAGAGTCAGGTTGTCTGCACTaGCTGAGCGCTTCCTCGCGGATCTTCTTAGGTCCT +
Preference number: 6 (lower is better)
Translates to: LGTTGAESGCLH*LSASSRIFLGP
Trigger: AGGACCTAAGAAGATCCGCGAGGAAGCGCTCAGCCAGTGCAGACAACCTGACTCTGCCCCGGTGGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS CAA 72 bp GAGATGATGGCTGGGGACCACCGGGGCAGAGTCAGGTaGTCTGCACTGGCTGAGCGCTTCCTCGCGGATCTT +
Preference number: 6 (lower is better)
Translates to: EMMAGDHRGRVR*SALAERFLADL
Trigger: AAGATCCGCGAGGAAGCGCTCAGCCAGTGCAGACAACCTGACTCTGCCCCGGTGGTCCCCAGCCATCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS CAA 72 bp CTGGCTGAGCGCTTCCTCGCGGATCTTCTTAGGTCCTaGTACTTGTCCTCGCAGAGGCGAGAGATGGCCTCA +
Preference number: 6 (lower is better)
Translates to: LAERFLADLLRS*YLSSQRREMAS
Trigger: TGAGGCCATCTCTCGCCTCTGCGAGGACAAGTACAAGGACCTAAGAAGATCCGCGAGGAAGCGCTCAGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS CAA 72 bp GAGCGCTTCCTCGCGGATCTTCTTAGGTCCTTGTACTaGTCCTCGCAGAGGCGAGAGATGGCCTCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: ERFLADLLRSLY*SSQRREMASSL
Trigger: CAAGCTTGAGGCCATCTCTCGCCTCTGCGAGGACAAGTACAAGGACCTAAGAAGATCCGCGAGGAAGCGCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
CDS CAA 72 bp GCCAGCAGGATCGCCCCTAAAACAATCCGCTTCCAGTaGGCCGGACAGATATCTATCTCTGCGTATGTTAAA +
Preference number: 6 (lower is better)
Translates to: ASRIAPKTIRFQ*AGQISISAYVK
Trigger: TTTAACATACGCAGAGATAGATATCTGTCCGGCCAACTGGAAGCGGATTGTTTTAGGGGCGATCCTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
ENST00000465416.5
ENST00000492478.5
ENST00000497692.1
CDS GCA 72 bp TGGAAGTGGAGGCAGGGCCCTCTAGTAGATTCCCTGTaGTTAATTGAATCAGGAGGAGATAACTGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: WKWRQGPLVDSL*LIESGGDNCSL
Trigger: AAGACTGCAGTTATCTCCTCCTGATTCAATTAAGCACAGGGAATCTACTAGAGGGCCCTGCCTCCACTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS GCA 72 bp TGGGTAAAAACCAAAGCCACAATGAACGTCCACATCTaGATCACATTAGCAATATGGGCCTCATCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: WVKTKATMNVHI*ITLAIWASSAF
Trigger: GAAGGCGGATGAGGCCCATATTGCTAATGTGATGCAGATGTGGACGTTCATTGTGGCTTTGGTTTTTACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470025.1
ENST00000493157.6
CDS GCA 72 bp CCACTTTTCTTCCTTTTTCTGGAGGGCCTCTTCAGATaGAGCAGTTCTCAGACTGAACGTGCACAGAATTAC +
Preference number: 6 (lower is better)
Translates to: PLFFLFLEGLFR*SSSQTERAQNY
Trigger: GTAATTCTGTGCACGTTCAGTCTGAGAACTGCTGCATCTGAAGAGGCCCTCCAGAAAAAGGAAGAAAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS CCA 72 bp ACAATGAACGTCCACATCTGCATCACATTAGCAATATaGGCCTCATCCGCCTTCATGCTACATGTCACTGGT +
Preference number: 6 (lower is better)
Translates to: TMNVHICITLAI*ASSAFMLHVTG
Trigger: ACCAGTGACATGTAGCATGAAGGCGGATGAGGCCCATATTGCTAATGTGATGCAGATGTGGACGTTCATTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470025.1
ENST00000493157.6
CDS CCA 72 bp AGTGGGGGAAATGATCAATGTGACCACATGCATCTCTaGTACTCAGATGATGTATTGGCAACACTGCACCAC +
Preference number: 6 (lower is better)
Translates to: SGGNDQCDHMHL*YSDDVLATLHH
Trigger: GTGGTGCAGTGTTGCCAATACATCATCTGAGTACCAGAGATGCATGTGGTCACATTGATCATTTCCCCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497692.1
CDS CAA 90 bp CCACTGCCTCAACCTCCTCCAAAGTGTAGAGTTCATAGCTTTTCCTaGGGAAGCTTCTGTGTATACAGTGCTTCCCACTTTTCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: PLPQPPPKCRVHSFS*GSFCVYSASHFSSF
Trigger: AAAGGAAGAAAAGTGGGAAGCACTGTATACACAGAAGCTTCCCAAGGAAAAGCTATGAACTCTACACTTTGGAGGAGGTTGAGGCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS CCA 72 bp CTGCTTCTGCTCTGGGTTGTGTTTGTCATAATCTGGTaGCACTTCGGATTTCGAAAGAGGGTGAAGATTTTC +
Preference number: 6 (lower is better)
Translates to: LLLLWVVFVIIW*HFGFRKRVKIF
Trigger: GAAAATCTTCACCCTCTTTCGAAATCCGAAGTGCCACCAGATTATGACAAACACAACCCAGAGCAGAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
ENST00000492478.5
CDS CAA 72 bp CAACCTCCTCCAAAGTGTAGAGTTCATAGCTTTTCCTaGGGAAGCTTCTGTGTATACAGTGCTTCCCACTTT +
Preference number: 6 (lower is better)
Translates to: QPPPKCRVHSFS*GSFCVYSASHF
Trigger: AAAGTGGGAAGCACTGTATACACAGAAGCTTCCCAAGGAAAAGCTATGAACTCTACACTTTGGAGGAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS TCA 72 bp CAGTCTTACATCAGCCATACTCGTATCCATGAAATATaGGTCAGTCATTTGCACAACTCCCTGAGTCACCTT +
Preference number: 6 (lower is better)
Translates to: QSYISHTRIHEI*VSHLHNSLSHL
Trigger: AAGGTGACTCAGGGAGTTGTGCAAATGACTGACTCATATTTCATGGATACGAGTATGGCTGATGTAAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS CCA 72 bp AACCTCCTCCAAAGTGTAGAGTTCATAGCTTTTCCTTaGGAAGCTTCTGTGTATACAGTGCTTCCCACTTTT +
Preference number: 6 (lower is better)
Translates to: NLLQSVEFIAFP*EASVYTVLPTF
Trigger: AAAAGTGGGAAGCACTGTATACACAGAAGCTTCCCAAGGAAAAGCTATGAACTCTACACTTTGGAGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS TCA 72 bp ATAACTGCAGTCTTACATCAGCCATACTCGTATCCATaGAATATGAGTCAGTCATTTGCACAACTCCCTGAG +
Preference number: 6 (lower is better)
Translates to: ITAVLHQPYSYP*NMSQSFAQLPE
Trigger: CTCAGGGAGTTGTGCAAATGACTGACTCATATTTCATGGATACGAGTATGGCTGATGTAAGACTGCAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS GCA 72 bp GATTCCCTGTGCTTAATTGAATCAGGAGGAGATAACTaGAGTCTTACATCAGCCATACTCGTATCCATGAAA +
Preference number: 6 (lower is better)
Translates to: DSLCLIESGGDN*SLTSAILVSMK
Trigger: TTTCATGGATACGAGTATGGCTGATGTAAGACTGCAGTTATCTCCTCCTGATTCAATTAAGCACAGGGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490012.6
CDS CAA 72 bp GAAAATGGTGGAGCAGGAACTGTATTTCCTTGCTATTaGTCCTGGAGGATGATGGTTAATGAAGAGACTCTT +
Preference number: 6 (lower is better)
Translates to: ENGGAGTVFPCY*SWRMMVNEETL
Trigger: AAGAGTCTCTTCATTAACCATCATCCTCCAGGACAAATAGCAAGGAAATACAGTTCCTGCTCCACCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265375.13
ENST00000339497.7
ENST00000374704.8
ENST00000374706.5
ENST00000490012.6
ENST00000492478.5
ENST00000493157.6
CDS CAA 72 bp TCTCAGACTGAACGTGCACAGAATTACCTAGAGAGCTaGTTTAACAGGTTCTCAAACTTCTCTTCCAAAGAT +
Preference number: 6 (lower is better)
Translates to: SQTERAQNYLES*FNRFSNFSSKD
Trigger: ATCTTTGGAAGAGAAGTTTGAGAACCTGTTAAACAAGCTCTCTAGGTAATTCTGTGCACGTTCAGTCTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374706.5
ENST00000490012.6
ENST00000493157.6