RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCNT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000129315

Ensembl transcript IDs: ENST00000261900.8, ENST00000417344.2, ENST00000550457.1, ENST00000618666.4, ENST00000640148.1

Found 626 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGACAGCCAACGCTTGCCCGGCAACATCTCCACACTGGTTAAGTTaGTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTG +
Preference number: 1 (lower is better)
Translates to: RTANACPATSPHWLS*WMTLRRLAGKALHL
Trigger: CAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 90 bp ACAGCCAACGCTTGCCCGGCAACATCTCCACACTGGTTAAGTTGCTaGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGTGG +
Preference number: 1 (lower is better)
Translates to: TANACPATSPHWLSC*MTLRRLAGKALHLW
Trigger: CCACAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 90 bp AAGGTTGGGAGGACAGCCAACGCTTGCCCGGCAACATCTCCACACTaGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGCA +
Preference number: 1 (lower is better)
Translates to: KVGRTANACPATSPH*LSCWMTLRRLAGKA
Trigger: TGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTCCCAACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR GCA 90 bp GAGGAGGTTCTGATGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTaGCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGT +
Preference number: 1 (lower is better)
Translates to: EEVLMAEVVAGVCLY*QISRRFHQTEDSDS
Trigger: ACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCATCAGAACCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 90 bp TGGGCCCTTTATCCAGTTTCGAATGAGGGACACGAGTTTTACAGCTaGGCTGTGAAAAGGAAAGGCCACTTGTGTCTGAGCTATGCCCAG +
Preference number: 1 (lower is better)
Translates to: WALYPVSNEGHEFYS*AVKRKGHLCLSYAQ
Trigger: CTGGGCATAGCTCAGACACAAGTGGCCTTTCCTTTTCACAGCCCAGCTGTAAAACTCGTGTCCCTCATTCGAAACTGGATAAAGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 90 bp CTTGATAGTCTATTGTCTGGGTCGTGTTGTGACCATTGGCCCCAGTaGGCCCTTTATCCAGTTTCGAATGAGGGACACGAGTTTTACAGC +
Preference number: 1 (lower is better)
Translates to: LDSLLSGSCCDHWPQ*ALYPVSNEGHEFYS
Trigger: GCTGTAAAACTCGTGTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCCAGACAATAGACTATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR TCA 90 bp CAAATTCAAATGCAGTGGGCTGAGTGGGCTGAACACCCTGGGCACTaGGCAGGGAGTGAAGCATATTCACAGTGTCTTGATAGTCTATTG +
Preference number: 1 (lower is better)
Translates to: QIQMQWAEWAEHPGH*AGSEAYSQCLDSLL
Trigger: CAATAGACTATCAAGACACTGTGAATATGCTTCACTCCCTGCTCAGTGCCCAGGGTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR GCA 90 bp ATACCCAGCAATGGCAGGAACTCTAGACAGTTCAAATATGCAAGATaGAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTAC +
Preference number: 1 (lower is better)
Translates to: IPSNGRNSRQFKYAR*RALTHRQLTFTPAY
Trigger: GTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCATCTTGCATATTTGAACTGTCTAGAGTTCCTGCCATTGCTGGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CCA 90 bp GAGAAAGGAGATTCTGGGCAGCATATGCATATTGTGACTTCACATTaGCTTCCATGTTCTCCAGTTGCCTCTTCTGGGCAGCCAATTCTT +
Preference number: 1 (lower is better)
Translates to: EKGDSGQHMHIVTSH*LPCSPVASSGQPIL
Trigger: AAGAATTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGAAGCCAATGTGAAGTCACAATATGCATATGCTGCCCAGAATCTCCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 90 bp CAACCATACTGGGATAGACAGGGCCCCTCTACAATTGCCTTTACTTaGAAGCCATGTATGTGGAGGAGTATGCATTTCAATATGGAGAAT +
Preference number: 1 (lower is better)
Translates to: QPYWDRQGPSTIAFT*KPCMWRSMHFNMEN
Trigger: ATTCTCCATATTGAAATGCATACTCCTCCACATACATGGCTTCCAAGTAAAGGCAATTGTAGAGGGGCCCTGTCTATCCCAGTATGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR TCA 90 bp TTAACAAGCAGCAACTCAAGAAACTTGGGGAGGTATCAAAGTCACTaGAAGCTTACTGGAACCTCGGAGGGCTATTTCTCACCATTTGAT +
Preference number: 1 (lower is better)
Translates to: LTSSNSRNLGRYQSH*KLTGTSEGYFSPFD
Trigger: ATCAAATGGTGAGAAATAGCCCTCCGAGGTTCCAGTAAGCTTTCAGTGACTTTGATACCTCCCCAAGTTTCTTGAGTTGCTGCTTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR GCA 90 bp TCTTTGTGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATTGTaGTTATCAGCTGCAGCATGGACTTTTATGCGCATTTTTATCTCC +
Preference number: 1 (lower is better)
Translates to: SLCSRLFVTLSSTEL*LSAAAWTFMRIFIS
Trigger: GGAGATAAAAATGCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR GCA 90 bp AAAGCAGCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATaGATAGATCTAAAAACAGACACTGTACGTATCTTAAGACAGTAC +
Preference number: 1 (lower is better)
Translates to: KAAASCRAHKELHDI*IDLKTDTVRILRQY
Trigger: GTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGCTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR TCA 90 bp CAAAAACAAAGCAGCAGCTTCATGCAGAGCCCACAAGGAGCTTCATaGCATATGCATAGATCTAAAAACAGACACTGTACGTATCTTAAG +
Preference number: 1 (lower is better)
Translates to: QKQSSSFMQSPQGAS*HMHRSKNRHCTYLK
Trigger: CTTAAGATACGTACAGTGTCTGTTTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGCTGCTTTGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTaGGCTTTCACAGGCAGGATATACATAGCACATTCCCCATCTCTT +
Preference number: 1 (lower is better)
Translates to: TISLFLVSSSFSHMV*AFTGRIYIAHSPSL
Trigger: AAGAGATGGGGAATGTGCTATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR GCA 90 bp AGCTTACTGGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTaGATAGACTGCTTAAATTCTCCCAAGACCAAAAGAATAAAATTT +
Preference number: 1 (lower is better)
Translates to: SLLEPRRAISHHLMS*IDCLNSPKTKRIKF
Trigger: AAATTTTATTCTTTTGGTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCCAGTAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR GCA 90 bp TATTCTTTCAGTGACACTTTAGCTGATGGCACACTCTTACTATTCTaGTTCTGGGAAATAAATGCATTTGAACCATCCTGTGGTAAGGAA +
Preference number: 1 (lower is better)
Translates to: YSFSDTLADGTLLLF*FWEINAFEPSCGKE
Trigger: TTCCTTACCACAGGATGGTTCAAATGCATTTATTTCCCAGAAGCAGAATAGTAAGAGTGTGCCATCAGCTAAAGTGTCACTGAAAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 90 bp CCTAAAGCTACCAAAGATGAACAATCTAAACACAATAGTATCCATTaGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTC +
Preference number: 1 (lower is better)
Translates to: PKATKDEQSKHNSIH*LGFAHSHGTSTVKF
Trigger: GAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATGGATACTATTGTGTTTAGATTGTTCATCTTTGGTAGCTTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CAA 90 bp GAGGACAGCCAACGCTTGCCCGGCAACATCTCCACACTGGTTAAGTaGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTT +
Preference number: 2 (lower is better)
Translates to: EDSQRLPGNISTLVK*LDDSSETGREGTAL
Trigger: AAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR TCA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGAAGGCCACTTGTGTCTaGGCTATGCCCAGGCATCTG +
Preference number: 2 (lower is better)
Translates to: GSCCDHWPQWALYPVSNEKATCV*AMPRHL
Trigger: CAGATGCCTGGGCATAGCTCAGACACAAGTGGCCTT...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp AGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCACCAGACTTGGCAGCCTCGCATaGCCTCCAATTCCAAATGCG +
Preference number: 2 (lower is better)
Translates to: RWWPGFVCIARSRGDSTRLGSLA*PPIPNA
Trigger: CGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAAG...TCTGGTGGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTGGCAGAAGCTGGCCTTaGTCGCCAACCCTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLGRSWP*SPTLLP
Trigger: AGGAAGGAGGGTTGGCGAGCAAGGCCAGCTTCTGCC...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp AGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCACCAGATCCATGTTCTCCAGTTaGCTCTTCTGGGCAGCCAAT +
Preference number: 2 (lower is better)
Translates to: RWWPGFVCIARSRGDSTRSMFSS*LFWAAN
Trigger: ATTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGA...TCTGGTGGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR TCA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCGAGGATTGTCTGCTCTaGAGTCTTTTCATCTGTTCC +
Preference number: 2 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSEDCLL*SLFICS
Trigger: GGAACAGATGAAAAGACTTCAGAGCAGACAATCCTC...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCAGGACAGCCAACGCTTaGCCGGCAACATCTCCACAC +
Preference number: 2 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSRTANA*PATSPH
Trigger: GTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCT...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp AGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCACCAGAACGAACAAATTCAAATaGAGTGGGCTGAGTGGGCTG +
Preference number: 2 (lower is better)
Translates to: RWWPGFVCIARSRGDSTRTNKFK*SGLSGL
Trigger: CAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGT...TCTGGTGGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGATCTCCACCTGCCACTaGGATTCTCATTTTGAGAGC +
Preference number: 2 (lower is better)
Translates to: GSCCDHWPQWALYPVSNEISTCH*DSHFES
Trigger: GCTCTCAAAATGAGAATCCCAGTGGCAGGTGGAGAT...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CAA 90 bp AACACCCTGGGCACTGAGCAGGGAGTGAAGCATATTCACAGTGTCTaGATAGTCTATTGTCTGGGTCGTGTTGTGACCATTGGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: NTLGTEQGVKHIHSV*IVYCLGRVVTIGPS
Trigger: ACTGGGGCCAATGGTCACAACACGACCCAGACAATAGACTATCAAGACACTGTGAATATGCTTCACTCCCTGCTCAGTGCCCAGGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTCTTGGCAGCCTCGCATaGCCTCCAATTCCAAATGCG +
Preference number: 2 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLLGSLA*PPIPNA
Trigger: CGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAAG...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CCA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTCTGCTTTTGTTTTCTTaGCAGCCTCGCATGCCCTCC +
Preference number: 2 (lower is better)
Translates to: DHQDVCSQYQLEVGNESALLLFS*QPRMPS
Trigger: GGAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAG...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCCTGGCTACTATGTTTTaGATCACCAGGACGTTTGTT +
Preference number: 2 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSLATMF*ITRTFV
Trigger: AACAAACGTCCTGGTGATCCAAAACATAGTAGCCAG...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR TCA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGCCGCTCGGGGTTTTCTaGACCCTCTATGGGCATTTT +
Preference number: 2 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKPLGVF*TLYGHF
Trigger: AAAATGCCCATAGAGGGTTCAGAAAACCCCGAGCGG...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR TCA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGGCAATCTTGGCTGGATaGTCAAACACAGCCCCTCCA +
Preference number: 2 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKAILAG*SNTAPP
Trigger: TGGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGC...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAGGCAGCCAATTCTTCTaGATGCTTCGCGCGGTATTC +
Preference number: 2 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTAGSQFF*MLRAVF
Trigger: GAATACCGCGCGAAGCATGCAGAAGAATTGGCTGCC...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR GCA 90 bp CGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGGACATTGTGCTTATCAGCTaGAGCATGGACTTTTATGCG +
Preference number: 2 (lower is better)
Translates to: RVVTIGPSGPFIQFRMRDIVLIS*SMDFYA
Trigger: CGCATAAAAGTCCATGCTGCAGCTGATAAGCACAAT...GTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTTCCAGTTGCCTCTTCTaGGCAGCCAATTCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: DHQDVCSQYQLEVGNESASSCLF*AANSSA
Trigger: TGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGA...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp TGTTCTCCAGTTGCCTCTTCTGGGCAGCCAATTCTTCTGCATGCTTCGCGCGGTTCATTAAACCTGCAATaGTTGTGTCTGAAGAGCTCT +
Preference number: 2 (lower is better)
Translates to: CSPVASSGQPILLHASRGSLNLQ*LCLKSS
Trigger: AGAGCTCTTCAGACACAACCATTGCAGGTTTAATGA...ACCGCGCGAAGCATGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp AGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCACCAGAATTGTGACTTCACATTaGCTTCCATGTTCTCCAGTT +
Preference number: 2 (lower is better)
Translates to: RWWPGFVCIARSRGDSTRIVTSH*LPCSPV
Trigger: AACTGGAGAACATGGAAGCCAATGTGAAGTCACAAT...TCTGGTGGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp GTCACTATAAGGACGAACAAATTCAAATGCAGTGGGCTGAGTGGGCTGAACACCCTTGGCAATCTTGGCTaGATGATCAAACACAGCCCC +
Preference number: 2 (lower is better)
Translates to: VTIRTNKFKCSGLSGLNTLGNLG*MIKHSP
Trigger: GGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAG...GGTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGTCCTTATAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTCTTGGCAATCTTGGCTaGATGATCAAACACAGCCCC +
Preference number: 2 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLLGNLG*MIKHSP
Trigger: GGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAG...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR TCA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACCCGCTCGGGGTTTTCTaGACCCTCTATGGGCATTTT +
Preference number: 2 (lower is better)
Translates to: MVERPRIQNVSLILHSFNPLGVF*TLYGHF
Trigger: AAAATGCCCATAGAGGGTTCAGAAAACCCCGAGCGG...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR GCA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGCCACACTGGTTAAGTTaGTGGATGACTCTTCGGAGA +
Preference number: 2 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKPHWLS*WMTLRR
Trigger: TCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGG...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCACCACACTGGTTAAGTTaGTGGATGACTCTTCGGAGA +
Preference number: 2 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTAPHWLS*WMTLRR
Trigger: TCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGG...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR GCA 90 bp ACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGATCCATGTTCTCCAGTTaGCTCTTCTGGGCAGCCAAT +
Preference number: 2 (lower is better)
Translates to: TMFWITRTFVPSTNWKLGSMFSS*LFWAAN
Trigger: ATTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGA...TCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGCACGAGTTTTACAGCTaGGCTGTGAAAAGGAAAGGC +
Preference number: 2 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKHEFYS*AVKRKG
Trigger: GCCTTTCCTTTTCACAGCCCAGCTGTAAAACTCGTG...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCACAAATTCAAATGCAGTaGGCTGAGTGGGCTGAACAC +
Preference number: 2 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTAQIQMQ*AEWAEH
Trigger: GTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTG...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR CAA 90 bp TTGTCTGCTCTGAAGTCTTTTCATCTGTTCCTCGGTCATCTGCTTTaGTTTTCTTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTT +
Preference number: 2 (lower is better)
Translates to: LSALKSFHLFLGHLL*FSWQPRMPSNSKCV
Trigger: AACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAGATGACCGAGGAACAGATGAAAAGACTTCAGAGCAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR TCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTAAGACTGCTCTCATTTaGACACTTTCCCAAAGCCTC +
Preference number: 2 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLKTALI*TLSQSL
Trigger: GAGGCTTTGGGAAAGTGTTCAAATGAGAGCAGTCTT...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCTATCTCCTCTGGTTTTaGAGACGCAGCTTTATCTCC +
Preference number: 2 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSYLLWF*RRSFIS
Trigger: GGAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATA...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAACCATTGGCTAGGCTTTaGTCATTCTCATGGCACCAG +
Preference number: 2 (lower is better)
Translates to: AASCRAHKELHDICIDLKPLARL*SFSWHQ
Trigger: CTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATGG...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAAAAAGCAGCAGCTTCATaGAGAGCCCACAAGGAGCTT +
Preference number: 2 (lower is better)
Translates to: AASCRAHKELHDICIDLKKAAAS*RAHKEL
Trigger: AAGCTCCTTGTGGGCTCTGCATGAAGCTGCTGCTTT...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAAGGGCCCCTCTACAATTaGCTTTACTTGGAAGCCATG +
Preference number: 2 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKGPLYN*LYLEAM
Trigger: CATGGCTTCCAAGTAAAGGCAATTGTAGAGGGGCCC...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCTGTTCCTCGGTCATCTaGTTTTGTTTTCTTGGCAGC +
Preference number: 2 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSCSSVI*FCFLGS
Trigger: GCTGCCAAGAAAACAAAAGCAGATGACCGAGGAACA...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAATGTTCCTCGGTCATCTaGTTTTGTTTTCTTGGCAGC +
Preference number: 2 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQCSSVI*FCFLGS
Trigger: GCTGCCAAGAAAACAAAAGCAGATGACCGAGGAACA...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR GCA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGACACTCTTACTATTCTaGTTCTGGGAAATAAATGCA +
Preference number: 2 (lower is better)
Translates to: GSCCDHWPQWALYPVSNETLLLF*FWEINA
Trigger: TGCATTTATTTCCCAGAAGCAGAATAGTAAGAGTGT...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CAA 90 bp CAGCTGCAGCATGGACTTTTATGCGCATTTTTATCTCCTCTGGTTTaGAAGACGCAGCTTTATCTCCACCTGCCACTGGGATTCTCATTT +
Preference number: 2 (lower is better)
Translates to: QLQHGLLCAFLSPLV*KTQLYLHLPLGFSF
Trigger: AAATGAGAATCCCAGTGGCAGGTGGAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATAAAAATGCGCATAAAAGTCCATGCTGCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTATTCAAATATGCAAGATaGAGGGCACTAACCCACCGT +
Preference number: 2 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLFKYAR*RALTHR
Trigger: ACGGTGGGTTAGTGCCCTGCATCTTGCATATTTGAA...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACAGGACAGCCAACGCTTaGCCGGCAACATCTCCACAC +
Preference number: 2 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANRTANA*PATSPH
Trigger: GTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCT...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR GCA 90 bp CCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCGCATTTTTAGGCAGCCAATTCTTCTaGATGCTTCGCGCGGTATTC +
Preference number: 2 (lower is better)
Translates to: PLQNCAYQLQHGLLCAFLGSQFF*MLRAVF
Trigger: GAATACCGCGCGAAGCATGCAGAAGAATTGGCTGCC...TAAAAATGCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp ACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGATCCTCTACAGAATTGTaGTTATCAGCTGCAGCATGG +
Preference number: 2 (lower is better)
Translates to: TMFWITRTFVPSTNWKLGSSTEL*LSAAAW
Trigger: CCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGA...TCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTATTCTCCCATATGGTTTaGGCTTTCACAGGCAGGATA +
Preference number: 2 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLFSHMV*AFTGRI
Trigger: TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAA...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGCTAGCTTCTCCCATATaGTTTGGGCTTTCACAGGCA +
Preference number: 2 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPLASPI*FGLSQA
Trigger: TGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAG...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTGTGTCTGAAGAGCTCTaGGAAATCATATTGAGGATT +
Preference number: 2 (lower is better)
Translates to: DHQDVCSQYQLEVGNESAVSEEL*EIILRI
Trigger: AATCCTCAATATGATTTCCCAGAGCTCTTCAGACAC...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp ACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAGCAACATCTCCACACTaGTTAAGTTGCTGGATGACT +
Preference number: 2 (lower is better)
Translates to: TMFWITRTFVPSTNWKLGATSPH*LSCWMT
Trigger: AGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGC...TCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGAGTTTGAAAGAAGGTTaGGAGGACAGCCAACGCTTG +
Preference number: 2 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPSLKEG*EDSQRL
Trigger: CAAGCGTTGGCTGTCCTCCCAACCTTCTTTCAAACT...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CCA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACGTTCCCAGTACCAACTaGAAGTTGGGAATGAGAGTG +
Preference number: 2 (lower is better)
Translates to: MVERPRIQNVSLILHSFNVPSTN*KLGMRV
Trigger: CACTCTCATTCCCAACTTCCAGTTGGTACTGGGAAC...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR CAA 90 bp AGCTATAGGTTTTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTaGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: SYRFYVLSCLSGYYV*DHQDVCSQYQLEVG
Trigger: CCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAAAACCTATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR TCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCACACACTTAAAAGTCTaGAAAAAGTGGCCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSTHLKV*KKWPEP
Trigger: AGGCTCAGGCCACTTTTTTCAGACTTTTAAGTGTGT...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTTGCTATGAGGCCAAATaGTTATGTGCCTCTGTGGTA +
Preference number: 2 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPCYEAK*LCASVV
Trigger: TACCACAGAGGCACATAATCATTTGGCCTCATAGCA...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTAAATTCCAAATGCGTTTaGGCCTGTTGGGAGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLNSKCV*ACWEFS
Trigger: AGAAAACTCCCAACAGGCTCAAACGCATTTGGAATT...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR TCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAACTGGGATTCTCATTTTaGGAGCTGTTTTGTCAGCCT +
Preference number: 2 (lower is better)
Translates to: AASCRAHKELHDICIDLKLGFSF*ELFCQP
Trigger: AGGCTGACAAAACAGCTCTCAAAATGAGAATCCCAG...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR TCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACAAGGCCACTTGTGTCTaGGCTATGCCCAGGCATCTG +
Preference number: 2 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANKATCV*AMPRHL
Trigger: CAGATGCCTGGGCATAGCTCAGACACAAGTGGCCTT...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR TCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCGAACACCCTGGGCACTaGGCAGGGAGTGAAGCATAT +
Preference number: 2 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFEHPGH*AGSEAY
Trigger: ATATGCTTCACTCCCTGCTCAGTGCCCAGGGTGTTC...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR GCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTACCCACCAGGAGTTACTaGTATGTATCATATACACAC +
Preference number: 2 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLPTRSY*YVSYTH
Trigger: GTGTGTATATGATACATAGCAGTAACTCCTGGTGGG...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAAGGCCAAATGATTATGTaGCTCTGTGGTAAAGGAGTG +
Preference number: 2 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKGQMIM*LCGKGV
Trigger: CACTCCTTTACCACAGAGGCACATAATCATTTGGCC...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp TTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTTGGATCACCAGGACGTTTGGCCAATTCTTCTGCATaGTTCGCGCGGTATTCTTTC +
Preference number: 2 (lower is better)
Translates to: LCAKLLVWLLCFGSPGRLANSSA*FARYSF
Trigger: GAAAGAATACCGCGCGAAGCATGCAGAAGAATTGGC...CAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTTTGTGCTTTTCTTTGTaGTCTCGGCTCTTTGTAACA +
Preference number: 2 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLLCFSL*SRLFVT
Trigger: TGTTACAAAGAGCCGAGAGCACAAAGAAAAGCACAA...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTAACAATTGCCTTTACTTaGAAGCCATGTATGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLTIAFT*KPCMWR
Trigger: CCTCCACATACATGGCTTCCAAGTAAAGGCAATTGT...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGAGTTTGAAAGAAGGTTaGGAGGACAGCCAACGCTTG +
Preference number: 2 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMSLKEG*EDSQRL
Trigger: CAAGCGTTGGCTGTCCTCCCAACCTTCTTTCAAACT...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTATGATGATGATTAGATaGGTGAGTCTTGTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: DHQDVCSQYQLEVGNESAMMMIR*VSLVLF
Trigger: GAAAAGCACAAGACTCACCCATCTAATCATCATCAT...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CAA 90 bp TGTTTAAAATCCAACCATACTGGGATAGACAGGGCCCCTCTACAATaGCCTTTACTTGGAAGCCATGTATGTGGAGGAGTATGCATTTCA +
Preference number: 2 (lower is better)
Translates to: CLKSNHTGIDRAPLQ*PLLGSHVCGGVCIS
Trigger: TGAAATGCATACTCCTCCACATACATGGCTTCCAAGTAAAGGCAATTGTAGAGGGGCCCTGTCTATCCCAGTATGGTTGGATTTTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CAA 90 bp GTCACTGAAAGCTTACTGGAACCTCGGAGGGCTATTTCTCACCATTaGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACCAAAAGA +
Preference number: 2 (lower is better)
Translates to: VTESLLEPRRAISHH*MSCIDCLNSPKTKR
Trigger: TCTTTTGGTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCCAGTAAGCTTTCAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCGGATCCACAATTGTCTaGTACAAGAAACCCTCCATT +
Preference number: 2 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSGSTIV*YKKPSI
Trigger: AATGGAGGGTTTCTTGTATCAGACAATTGTGGATCC...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTACACACTTAAAAGTCTaGAAAAAGTGGCCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPTHLKV*KKWPEP
Trigger: AGGCTCAGGCCACTTTTTTCAGACTTTTAAGTGTGT...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAAGAAGTTGAGGCTCTCTaGTATGGACATACACTGATT +
Preference number: 2 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKEVEAL*YGHTLI
Trigger: AATCAGTGTATGTCCATATCAGAGAGCCTCAACTTC...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp TTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATATCTCCTCTGGTTTTaGAGACGCAGCTTTATCTCC +
Preference number: 2 (lower is better)
Translates to: FLVSSSFSHMVWAFTGRIYLLWF*RRSFIS
Trigger: GGAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATA...TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR GCA 90 bp CACATTCCCCATCTCTTAGAGACCTTAAGACTGCTCTCATTTGAACACTTTCCCCCCACCAGGAGTTACTaGTATGTATCATATACACAC +
Preference number: 2 (lower is better)
Translates to: HIPHLLETLRLLSFEHFPPTRSY*YVSYTH
Trigger: GTGTGTATATGATACATAGCAGTAACTCCTGGTGGG...GGGAAAGTGTTCAAATGAGAGCAGTCTTAAGGTCTCTAAGAGATGGGGAATGTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCGTTAACGTTTACTCCTaGCTACAAATTCCTTTCTAT +
Preference number: 2 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSVNVYS*LQIPFY
Trigger: ATAGAAAGGAATTTGTAGGCAGGAGTAAACGTTAAC...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp TTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATCCTCTACAGAATTGTaGTTATCAGCTGCAGCATGG +
Preference number: 2 (lower is better)
Translates to: FLVSSSFSHMVWAFTGRISSTEL*LSAAAW
Trigger: CCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGA...TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CCA 90 bp ACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAAACCTAATTAGATGGTaGAGAGGCCAAGAATTCAGA +
Preference number: 2 (lower is better)
Translates to: TMFWITRTFVPSTNWKLGNLIRW*RGQEFR
Trigger: TCTGAATTCTTGGCCTCTCCACCATCTAATTAGGTT...TCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CCA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTATTCTCCCATATGGTTTaGGCTTTCACAGGCAGGATA +
Preference number: 2 (lower is better)
Translates to: HCTYLKTVPGGINTERSLFSHMV*AFTGRI
Trigger: TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAA...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTCTAGCTTCTCCCATATaGTTTGGGCTTTCACAGGCA +
Preference number: 2 (lower is better)
Translates to: MRFTEAEAPGLLITITYFLASPI*FGLSQA
Trigger: TGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAG...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTACACAATAGTATCCATTaGCTAGGCTTTGCTCATTCT +
Preference number: 2 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLHNSIH*LGFAHS
Trigger: AGAATGAGCAAAGCCTAGCCAATGGATACTATTGTG...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCACTGAAAGCTTACTaGAACCTCGGAGGGCTATTT +
Preference number: 2 (lower is better)
Translates to: NRHCTYLKTVPGGINTERSLKAY*NLGGLF
Trigger: AAATAGCCCTCCGAGGTTCCAGTAAGCTTTCAGTGA...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTCACTGGTTAAGTTGCTaGATGACTCTTCGGAGACTG +
Preference number: 2 (lower is better)
Translates to: MRFTEAEAPGLLITITYFHWLSC*MTLRRL
Trigger: CAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTG...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CCA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTATCTCCACCTGCCACTaGGATTCTCATTTTGAGAGC +
Preference number: 2 (lower is better)
Translates to: MRFTEAEAPGLLITITYFISTCH*DSHFES
Trigger: GCTCTCAAAATGAGAATCCCAGTGGCAGGTGGAGAT...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR CAA 90 bp ATTAAACCTGCAATGGTTGTGTCTGAAGAGCTCTGGGAAATCATATaGAGGATTGTCTGCTCTGAAGTCTTTTCATCTGTTCCTCGGTCA +
Preference number: 2 (lower is better)
Translates to: IKPAMVVSEELWEII*RIVCSEVFSSVPRS
Trigger: TGACCGAGGAACAGATGAAAAGACTTCAGAGCAGACAATCCTCAATATGATTTCCCAGAGCTCTTCAGACACAACCATTGCAGGTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR TCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCTCAAAATCAAACCAGTaGTCATCAAGTCCACAAAGA +
Preference number: 2 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSSKSNQ*SSSPQR
Trigger: TCTTTGTGGACTTGATGATCACTGGTTTGATTTTGA...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGCCACAAGGAGCTTCATaGCATATGCATAGATCTAAA +
Preference number: 2 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPPQGAS*HMHRSK
Trigger: TTTAGATCTATGCATATGTCATGAAGCTCCTTGTGG...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACAGGTATCAAAGTCACTaGAAGCTTACTGGAACCTCG +
Preference number: 2 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDRYQSH*KLTGTS
Trigger: CGAGGTTCCAGTAAGCTTTCAGTGACTTTGATACCT...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTATTATCCAGTTTCGAATaGGGGACACGAGTTTTACAG +
Preference number: 2 (lower is better)
Translates to: HCTYLKTVPGGINTERSLLSSFE*GTRVLQ
Trigger: CTGTAAAACTCGTGTCCCTCATTCGAAACTGGATAA...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR GCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCACCATGTCAAATACATaGCTCTTCCTTTATGTTCTC +
Preference number: 2 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSTMSNT*LFLYVL
Trigger: GAGAACATAAAGGAAGAGGCATGTATTTGACATGGT...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp CACATTCCCCATCTCTTAGAGACCTTAAGACTGCTCTCATTTGAACACTTTCCCAACCTAATTAGATGGTaGAGAGGCCAAGAATTCAGA +
Preference number: 2 (lower is better)
Translates to: HIPHLLETLRLLSFEHFPNLIRW*RGQEFR
Trigger: TCTGAATTCTTGGCCTCTCCACCATCTAATTAGGTT...GGGAAAGTGTTCAAATGAGAGCAGTCTTAAGGTCTCTAAGAGATGGGGAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGTCCATTTTTCAGCTCTaGCAAGAAGAGGGAAGATAT +
Preference number: 2 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPSIFQL*QEEGRY
Trigger: ATATCTTCCCTCTTCTTGCCAGAGCTGAAAAATGGA...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAACAGATGCAGACTAAATaGCACATTCCCTTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: AASCRAHKELHDICIDLKQMQTK*HIPFWK
Trigger: TTTCCAAAAGGGAATGTGCCATTTAGTCTGCATCTG...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGCACTCAGTTAAAAGCTaGGTGTTAACAAGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: NRHCTYLKTVPGGINTERHSVKS*VLTSSN
Trigger: GTTGCTGCTTGTTAACACCCAGCTTTTAACTGAGTG...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTGTGTCTGAAGAGCTCTaGGAAATCATATTGAGGATT +
Preference number: 2 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPVSEEL*EIILRI
Trigger: AATCCTCAATATGATTTCCCAGAGCTCTTCAGACAC...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CCA 90 bp TTGTGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTTCATTAAACCTGCAATaGTTGTGTCTGAAGAGCTCT +
Preference number: 2 (lower is better)
Translates to: LCSRLFVTLSSTELCLSASLNLQ*LCLKSS
Trigger: AGAGCTCTTCAGACACAACCATTGCAGGTTTAATGA...AGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp TCTGGCTACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAATGATGATGATTAGATaGGTGAGTCTTGTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: SGYYVLDHQDVCSQYQLEMMMIR*VSLVLF
Trigger: GAAAAGCACAAGACTCACCCATCTAATCATCATCAT...TTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR TCA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAACCTATGACTTCCAAATaGAAAATAATTCGACCTCTC +
Preference number: 2 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKPMTSK*KIIRPL
Trigger: GAGAGGTCGAATTATTTTTCATTTGGAAGTCATAGG...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACGACCTATGTCAGCAATaGTCTACTAGTGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANDLCQQ*STSAKA
Trigger: GGCCTTTGCACTAGTAGATCATTGCTGACATAGGTC...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTATCATTTCTCACCCTTTaGAGGTACAAGGATAGGAAA +
Preference number: 2 (lower is better)
Translates to: HCTYLKTVPGGINTERSLSFLTL*RYKDRK
Trigger: TTTCCTATCCTTGTACCTTCAAAGGGTGAGAAATGA...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp ATCATATTGAGGATTGTCTGCTCTGAAGTCTTTTCATCTGTTCCTCGGTCATCTAATTCCAAATGCGTTTaGGCCTGTTGGGAGTTTTCT +
Preference number: 2 (lower is better)
Translates to: IILRIVCSEVFSSVPRSSNSKCV*ACWEFS
Trigger: AGAAAACTCCCAACAGGCTCAAACGCATTTGGAATT...AGATGACCGAGGAACAGATGAAAAGACTTCAGAGCAGACAATCCTCAATATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR GCA 90 bp TCTGGCTACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAACACTCTTACTATTCTaGTTCTGGGAAATAAATGCA +
Preference number: 2 (lower is better)
Translates to: SGYYVLDHQDVCSQYQLETLLLF*FWEINA
Trigger: TGCATTTATTTCCCAGAAGCAGAATAGTAAGAGTGT...TTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGATCAACCTAATTAGATaGTGGAGAGGCCAAGAATTC +
Preference number: 2 (lower is better)
Translates to: NRHCTYLKTVPGGINTERINLIR*WRGQEF
Trigger: GAATTCTTGGCCTCTCCACCATCTAATTAGGTTGAT...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp TTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTTGGATCACCAGGACGTTTGATCAACCTAATTAGATaGTGGAGAGGCCAAGAATTC +
Preference number: 2 (lower is better)
Translates to: LCAKLLVWLLCFGSPGRLINLIR*WRGQEF
Trigger: GAATTCTTGGCCTCTCCACCATCTAATTAGGTTGAT...CAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR CAA 90 bp TTCTCATTCCAGACTACTCTATCAGGCAGGATTACTGTACCGTGCTaGTTTCAAACTCACATCCACGGAGGGATAAAAAGACAAAATAAA +
Preference number: 2 (lower is better)
Translates to: FSFQTTLSGRITVPC*FQTHIHGGIKRQNK
Trigger: TTTATTTTGTCTTTTTATCCCTCCGTGGATGTGAGTTTGAAACAAGCACGGTACAGTAATCCTGCCTGATAGAGTAGTCTGGAATGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGAAAACAAACTCAAATTaGACCACCTTTTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: NRHCTYLKTVPGGINTERKTNSN*TTFSRA
Trigger: TGCTCTGGAAAAGGTGGTTCAATTTGAGTTTGTTTT...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCGAGGATTGTCTGCTCTaGAGTCTTTTCATCTGTTCC +
Preference number: 2 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFEDCLL*SLFICS
Trigger: GGAACAGATGAAAAGACTTCAGAGCAGACAATCCTC...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR GCA 90 bp TTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATAACCATGTCAAATACATaGCTCTTCCTTTATGTTCTC +
Preference number: 2 (lower is better)
Translates to: FLVSSSFSHMVWAFTGRITMSNT*LFLYVL
Trigger: GAGAACATAAAGGAAGAGGCATGTATTTGACATGGT...TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGTGGCATGAAGTAAGCTaGAATCAAATCATGAAAACA +
Preference number: 2 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPWHEVS*NQIMKT
Trigger: TGTTTTCATGATTTGATTGCAGCTTACTTCATGCCA...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCATTAAATGATCTCTaGCTAGGTAGTTTTCAGTGG +
Preference number: 2 (lower is better)
Translates to: NRHCTYLKTVPGGINTERSLNDL*LGSFQW
Trigger: CCACTGAAAACTACCTAGCCAGAGATCATTTAATGA...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CAA 90 bp AAGCTTACTGGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTaGCATAGACTGCTTAAATTCTCCCAAGACCAAAAGAATAAAATT +
Preference number: 2 (lower is better)
Translates to: KLTGTSEGYFSPFDE*HRLLKFSQDQKNKI
Trigger: AATTTTATTCTTTTGGTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCCAGTAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACGGATCCACAATTGTCTaGTACAAGAAACCCTCCATT +
Preference number: 2 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANGSTIV*YKKPSI
Trigger: AATGGAGGGTTTCTTGTATCAGACAATTGTGGATCC...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR TCA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACTCAAAATCAAACCAGTaGTCATCAAGTCCACAAAGA +
Preference number: 2 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDSKSNQ*SSSPQR
Trigger: TCTTTGTGGACTTGATGATCACTGGTTTGATTTTGA...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACCATATCCTAATCCATTaGTGTTTGCAACTGGAGATT +
Preference number: 2 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDHILIH*CLQLEI
Trigger: AATCTCCAGTTGCAAACAGCAATGGATTAGGATATG...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTATTTTATGTGCTAAGTTaGTTGTCTGGCTACTATGTT +
Preference number: 2 (lower is better)
Translates to: HCTYLKTVPGGINTERSLFYVLS*LSGYYV
Trigger: AACATAGTAGCCAGACAAGCAACTTAGCACATAAAA...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CCA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTTTCACTCCTAATATCTaGGATAATCAAGCCTCCATA +
Preference number: 2 (lower is better)
Translates to: MRFTEAEAPGLLITITYFFTPNI*DNQASI
Trigger: TATGGAGGCTTGATTATCCCAGATATTAGGAGTGAA...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CCA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACTCATTAAATGATCTCTaGCTAGGTAGTTTTCAGTGG +
Preference number: 2 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDSLNDL*LGSFQW
Trigger: CCACTGAAAACTACCTAGCCAGAGATCATTTAATGA...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACGTATGTGGAGGAGTATaGATTTCAATATGGAGAATT +
Preference number: 2 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDVCGGV*ISIWRI
Trigger: AATTCTCCATATTGAAATGCATACTCCTCCACATAC...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR GCA 90 bp CCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCGCATTTTTAATATTGAGGATTGTCTaGTCTGAAGTCTTTTCATCT +
Preference number: 2 (lower is better)
Translates to: PLQNCAYQLQHGLLCAFLILRIV*SEVFSS
Trigger: AGATGAAAAGACTTCAGAGCAGACAATCCTCAATAT...TAAAAATGCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR TCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACCCTATGACTTCCAAATaGAAAATAATTCGACCTCTC +
Preference number: 2 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANPMTSK*KIIRPL
Trigger: GAGAGGTCGAATTATTTTTCATTTGGAAGTCATAGG...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp AGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCACCAGAGAGGACAGCCAACGCTaGCCCGGCAACATCTCCACA +
Preference number: 3 (lower is better)
Translates to: RWWPGFVCIARSRGDSTREDSQR*PGNIST
Trigger: TGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTC...TCTGGTGGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 72 bp GCTTGCCCGGCAACATCTCCACACTGGTTAAGTTGCTaGATGACTCTTCGGAGACTGGCAGGGAAGGCACTG +
Preference number: 3 (lower is better)
Translates to: ACPATSPHWLSC*MTLRRLAGKAL
Trigger: CAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCCGGGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR GCA 72 bp AACGCTTGCCCGGCAACATCTCCACACTGGTTAAGTTaGTGGATGACTCTTCGGAGACTGGCAGGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: NACPATSPHWLS*WMTLRRLAGKA
Trigger: TGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCCGGGCAAGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 72 bp AGGACAGCCAACGCTTGCCCGGCAACATCTCCACACTaGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCA +
Preference number: 3 (lower is better)
Translates to: RTANACPATSPH*LSCWMTLRRLA
Trigger: TGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp TGTTCTCCAGTTGCCTCTTCTGGGCAGCCAATTCTTCTGCATGCTTCGCGCGGTCTCGGTCATCTGCTTTaGTTTTCTTGGCAGCCTCGC +
Preference number: 3 (lower is better)
Translates to: CSPVASSGQPILLHASRGLGHLL*FSWQPR
Trigger: GCGAGGCTGCCAAGAAAACAAAAGCAGATGACCGAG...ACCGCGCGAAGCATGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGTTCCATGTTCTCCAGTaGCCTCTTCTGGGCAGCCAA +
Preference number: 3 (lower is better)
Translates to: GSCCDHWPQWALYPVSNEFHVLQ*PLLGSQ
Trigger: TTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGAA...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR TCA 72 bp ATGCAGTGGGCTGAGTGGGCTGAACACCCTGGGCACTaGGCAGGGAGTGAAGCATATTCACAGTGTCTTGAT +
Preference number: 3 (lower is better)
Translates to: MQWAEWAEHPGH*AGSEAYSQCLD
Trigger: ATCAAGACACTGTGAATATGCTTCACTCCCTGCTCAGTGCCCAGGGTGTTCAGCCCACTCAGCCCACTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 72 bp CTATTGTCTGGGTCGTGTTGTGACCATTGGCCCCAGTaGGCCCTTTATCCAGTTTCGAATGAGGGACACGAG +
Preference number: 3 (lower is better)
Translates to: LLSGSCCDHWPQ*ALYPVSNEGHE
Trigger: CTCGTGTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCCAGACAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATAGGGCAGAAGCTGGCCTaGCTCGCCAACCCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIGQKLA*LANPPS
Trigger: GGAAGGAGGGTTGGCGAGCAAGGCCAGCTTCTGCCC...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp CTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTCTCGGTCATCTGCTTTaGTTTTCTTGGCAGCCTCGC +
Preference number: 3 (lower is better)
Translates to: LVKLLDDSSETGREGTALLGHLL*FSWQPR
Trigger: GCGAGGCTGCCAAGAAAACAAAAGCAGATGACCGAG...AAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGGAGGACAGCCAACGCTaGCCCGGCAACATCTCCACA +
Preference number: 3 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKEDSQR*PGNIST
Trigger: TGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTC...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGAAAAGGAAAGGCCACTaGTGTCTGAGCTATGCCCAG +
Preference number: 3 (lower is better)
Translates to: GSCCDHWPQWALYPVSNEKRKGH*CLSYAQ
Trigger: CTGGGCATAGCTCAGACACAAGTGGCCTTTCCTTTT...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTGGGCAGAAGCTGGCCTaGCTCGCCAACCCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: MRFTEAEAPGLLITITYFGQKLA*LANPPS
Trigger: GGAAGGAGGGTTGGCGAGCAAGGCCAGCTTCTGCCC...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp GCCCTTTATCCAGTTTCGAATGAGGGACACGAGTTTTACAGCTGGGCTGTGAAATCTGCTTTTGTTTTCTaGGCAGCCTCGCATGCCCTC +
Preference number: 3 (lower is better)
Translates to: ALYPVSNEGHEFYSWAVKSAFVF*AASHAL
Trigger: GAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAGA...TTTCACAGCCCAGCTGTAAAACTCGTGTCCCTCATTCGAAACTGGATAAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCTCTGCTTTTGTTTTCTaGGCAGCCTCGCATGCCCTC +
Preference number: 3 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSSAFVF*AASHAL
Trigger: GAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAGA...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR GCA 72 bp TCCAGTTGCCTCTTCTGGGCAGCCAATTCTTCTGCATaGTTCGCGCGGTATTCTTTCAGTGACACTTTAGCT +
Preference number: 3 (lower is better)
Translates to: SSCLFWAANSSA*FARYSFSDTLA
Trigger: AGCTAAAGTGTCACTGAAAGAATACCGCGCGAAGCATGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp CTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGTGGTAGAAGTTCTCTGGGAAATCATATaGAGGATTGTCTGCTCTGAA +
Preference number: 3 (lower is better)
Translates to: LDDSSETGREGTALVVEVLWEII*RIVCSE
Trigger: TTCAGAGCAGACAATCCTCAATATGATTTCCCAGAG...AACTTCTACCACAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp AGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCACCAGACATATTCACAGTGTCTaGATAGTCTATTGTCTGGGT +
Preference number: 3 (lower is better)
Translates to: RWWPGFVCIARSRGDSTRHIHSV*IVYCLG
Trigger: ACCCAGACAATAGACTATCAAGACACTGTGAATATG...TCTGGTGGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR TCA 72 bp TGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTaGGCCTGTTGGGAGTTTTCTCCAAAATCTGTAGAA +
Preference number: 3 (lower is better)
Translates to: WQPRMPSNSKCV*ACWEFSPKSVE
Trigger: TTCTACAGATTTTGGAGAAAACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR TCA 72 bp GAAGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATaGTCAAACACAGCCCCTCCAGTCTCTTCAGAGGGT +
Preference number: 3 (lower is better)
Translates to: EEDLVLLAILAG*SNTAPPVSSEG
Trigger: ACCCTCTGAAGAGACTGGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 72 bp GATTCTGGGCAGCATATGCATATTGTGACTTCACATTaGCTTCCATGTTCTCCAGTTGCCTCTTCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: DSGQHMHIVTSH*LPCSPVASSGQ
Trigger: CTGCCCAGAAGAGGCAACTGGAGAACATGGAAGCCAATGTGAAGTCACAATATGCATATGCTGCCCAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 72 bp TATCCAGTTTCGAATGAGGGACACGAGTTTTACAGCTaGGCTGTGAAAAGGAAAGGCCACTTGTGTCTGAGC +
Preference number: 3 (lower is better)
Translates to: YPVSNEGHEFYS*AVKRKGHLCLS
Trigger: GCTCAGACACAAGTGGCCTTTCCTTTTCACAGCCCAGCTGTAAAACTCGTGTCCCTCATTCGAAACTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTAAGGGCCCCTCTACAATaGCCTTTACTTGGAAGCCAT +
Preference number: 3 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLRAPLQ*PLLGSH
Trigger: ATGGCTTCCAAGTAAAGGCAATTGTAGAGGGGCCCT...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp CACATTCCCCATCTCTTAGAGACCTTAAGACTGCTCTCATTTGAACACTTTCCCGGATCACCAGGACGTTaGTTCCCAGTACCAACTGGA +
Preference number: 3 (lower is better)
Translates to: HIPHLLETLRLLSFEHFPGSPGR*FPVPTG
Trigger: TCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCC...GGGAAAGTGTTCAAATGAGAGCAGTCTTAAGGTCTCTAAGAGATGGGGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CAA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCATGGCACATTCCCTTTaGGAAACAGACTCCAACAAA +
Preference number: 3 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSMAHSL*ETDSNK
Trigger: TTTGTTGGAGTCTGTTTCCAAAAGGGAATGTGCCAT...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAATGCGTTTGAGCCTGTaGGGAGTTTTCTCCAAAATC +
Preference number: 3 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTAMRLSL*GVFSKI
Trigger: GATTTTGGAGAAAACTCCCAACAGGCTCAAACGCAT...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CAA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAACAATTCCAAATGCGTTaGAGCCTGTTGGGAGTTTTC +
Preference number: 3 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQQFQMR*SLLGVF
Trigger: GAAAACTCCCAACAGGCTCAAACGCATTTGGAATTG...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CAA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACTCCACACTGGTTAAGTaGCTGGATGACTCTTCGGAG +
Preference number: 3 (lower is better)
Translates to: MVERPRIQNVSLILHSFNSTLVK*LDDSSE
Trigger: CTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGA...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR CCA 72 bp TTTCATCTGTTCCTCGGTCATCTGCTTTTGTTTTCTTaGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTT +
Preference number: 3 (lower is better)
Translates to: FHLFLGHLLLFS*QPRMPSNSKCV
Trigger: AACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAGATGACCGAGGAACAGATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAACGAAAGGATCCACAATaGTCTGATACAAGAAACCCT +
Preference number: 3 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQRKDPQ*SDTRNP
Trigger: AGGGTTTCTTGTATCAGACAATTGTGGATCCTTTCG...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGTTAAGAGTCAGGGTGTaGGCTGTACTTGCCCAAACT +
Preference number: 3 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPLRVRV*AVLAQT
Trigger: AGTTTGGGCAAGTACAGCCAACACCCTGACTCTTAA...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp TCTGGCTACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAACAATTCCAAATGCGTTaGAGCCTGTTGGGAGTTTTC +
Preference number: 3 (lower is better)
Translates to: SGYYVLDHQDVCSQYQLEQFQMR*SLLGVF
Trigger: GAAAACTCCCAACAGGCTCAAACGCATTTGGAATTG...TTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAATTAAACCTGCAATGGTaGTGTCTGAAGAGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: AASCRAHKELHDICIDLKLNLQW*CLKSSG
Trigger: CCCAGAGCTCTTCAGACACAACCATTGCAGGTTTAA...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR-3UTR CAA 90 bp TTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTTGGATCACCAGGACGTTTGTCCACACTGGTTAAGTaGCTGGATGACTCTTCGGAG +
Preference number: 3 (lower is better)
Translates to: LCAKLLVWLLCFGSPGRLSTLVK*LDDSSE
Trigger: CTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGA...CAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp CCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCGCATTTTTATTCCATGTTCTCCAGTaGCCTCTTCTGGGCAGCCAA +
Preference number: 3 (lower is better)
Translates to: PLQNCAYQLQHGLLCAFLFHVLQ*PLLGSQ
Trigger: TTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGAA...TAAAAATGCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGTATTGTGACTTCACATaGGCTTCCATGTTCTCCAGT +
Preference number: 3 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKYCDFT*ASMFSS
Trigger: ACTGGAGAACATGGAAGCCAATGTGAAGTCACAATA...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR TCA 72 bp AGCAGCAGCTTCATGCAGAGCCCACAAGGAGCTTCATaGCATATGCATAGATCTAAAAACAGACACTGTACG +
Preference number: 3 (lower is better)
Translates to: SSSFMQSPQGAS*HMHRSKNRHCT
Trigger: CGTACAGTGTCTGTTTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR TCA 72 bp AGCAACTCAAGAAACTTGGGGAGGTATCAAAGTCACTaGAAGCTTACTGGAACCTCGGAGGGCTATTTCTCA +
Preference number: 3 (lower is better)
Translates to: SNSRNLGRYQSH*KLTGTSEGYFS
Trigger: TGAGAAATAGCCCTCCGAGGTTCCAGTAAGCTTTCAGTGACTTTGATACCTCCCCAAGTTTCTTGAGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CCA 72 bp TGGGATAGACAGGGCCCCTCTACAATTGCCTTTACTTaGAAGCCATGTATGTGGAGGAGTATGCATTTCAAT +
Preference number: 3 (lower is better)
Translates to: WDRQGPSTIAFT*KPCMWRSMHFN
Trigger: ATTGAAATGCATACTCCTCCACATACATGGCTTCCAAGTAAAGGCAATTGTAGAGGGGCCCTGTCTATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCCGAAAGGATCCACAATaGTCTGATACAAGAAACCCT +
Preference number: 3 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSRKDPQ*SDTRNP
Trigger: AGGGTTTCTTGTATCAGACAATTGTGGATCCTTTCG...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACGGGTGTTGGCTGTACTaGCCCAAACTACAAATTAGA +
Preference number: 3 (lower is better)
Translates to: MVERPRIQNVSLILHSFNGCWLY*PKLQIR
Trigger: TCTAATTTGTAGTTTGGGCAAGTACAGCCAACACCC...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTATTAAGAGTCAGGGTGTaGGCTGTACTTGCCCAAACT +
Preference number: 3 (lower is better)
Translates to: HCTYLKTVPGGINTERSLLRVRV*AVLAQT
Trigger: AGTTTGGGCAAGTACAGCCAACACCCTGACTCTTAA...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGTATGTGCTAAGTTGCTaGTCTGGCTACTATGTTTTG +
Preference number: 3 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKYVLSC*SGYYVL
Trigger: CAAAACATAGTAGCCAGACAAGCAACTTAGCACATA...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp GCCCTTTATCCAGTTTCGAATGAGGGACACGAGTTTTACAGCTGGGCTGTGAAAGTTTTATGTGCTAAGTaGCTTGTCTGGCTACTATGT +
Preference number: 3 (lower is better)
Translates to: ALYPVSNEGHEFYSWAVKVLCAK*LVWLLC
Trigger: ACATAGTAGCCAGACAAGCAACTTAGCACATAAAAC...TTTCACAGCCCAGCTGTAAAACTCGTGTCCCTCATTCGAAACTGGATAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR GCA 72 bp AATGGCAGGAACTCTAGACAGTTCAAATATGCAAGATaGAGGGCACTAACCCACCGTCAGTTAACGTTTACT +
Preference number: 3 (lower is better)
Translates to: NGRNSRQFKYAR*RALTHRQLTFT
Trigger: AGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCATCTTGCATATTTGAACTGTCTAGAGTTCCTGCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR GCA 72 bp TTCCAGACTACTCTATCAGGCAGGATTACTGTACCGTaGTTGTTTCAAACTCACATCCACGGAGGGATAAAA +
Preference number: 3 (lower is better)
Translates to: FQTTLSGRITVP*LFQTHIHGGIK
Trigger: TTTTATCCCTCCGTGGATGTGAGTTTGAAACAAGCACGGTACAGTAATCCTGCCTGATAGAGTAGTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR TCA 72 bp AGAGCTCTGGGAAATCATATTGAGGATTGTCTGCTCTaGAGTCTTTTCATCTGTTCCTCGGTCATCTGCTTT +
Preference number: 3 (lower is better)
Translates to: RALGNHIEDCLL*SLFICSSVICF
Trigger: AAAGCAGATGACCGAGGAACAGATGAAAAGACTTCAGAGCAGACAATCCTCAATATGATTTCCCAGAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR GCA 72 bp GAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTaGATAGACTGCTTAAATTCTCCCAAGACCAAAAGA +
Preference number: 3 (lower is better)
Translates to: EPRRAISHHLMS*IDCLNSPKTKR
Trigger: TCTTTTGGTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CCA 72 bp GGCAAAGTTCTAAGGAACTTTACTACAGTACGGCCATaGATAACTGCTATGAGGCCAAATGATTATGTGCCT +
Preference number: 3 (lower is better)
Translates to: GKVLRNFTTVRP*ITAMRPNDYVP
Trigger: AGGCACATAATCATTTGGCCTCATAGCAGTTATCCATGGCCGTACTGTAGTAAAGTTCCTTAGAACTTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CCA 72 bp CTCATTAAACCTGCAATGGTTGTGTCTGAAGAGCTCTaGGAAATCATATTGAGGATTGTCTGCTCTGAAGTC +
Preference number: 3 (lower is better)
Translates to: LIKPAMVVSEEL*EIILRIVCSEV
Trigger: GACTTCAGAGCAGACAATCCTCAATATGATTTCCCAGAGCTCTTCAGACACAACCATTGCAGGTTTAATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCCTTCTCCCATATGGTTaGGGCTTTCACAGGCAGGAT +
Preference number: 3 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFLLPYG*GFHRQD
Trigger: ATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAG...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGACAATCCACAGGTATTaGTTTTTGCCAACACGAGTC +
Preference number: 3 (lower is better)
Translates to: NRHCTYLKTVPGGINTERTIHRY*FLPTRV
Trigger: GACTCGTGTTGGCAAAAACAAATACCTGTGGATTGT...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp ATCATATTGAGGATTGTCTGCTCTGAAGTCTTTTCATCTGTTCCTCGGTCATCTATGCGTTTGAGCCTGTaGGGAGTTTTCTCCAAAATC +
Preference number: 3 (lower is better)
Translates to: IILRIVCSEVFSSVPRSSMRLSL*GVFSKI
Trigger: GATTTTGGAGAAAACTCCCAACAGGCTCAAACGCAT...AGATGACCGAGGAACAGATGAAAAGACTTCAGAGCAGACAATCCTCAATATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCTCTGGGAAATCATATaGAGGATTGTCTGCTCTGAA +
Preference number: 3 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMLWEII*RIVCSE
Trigger: TTCAGAGCAGACAATCCTCAATATGATTTCCCAGAG...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCATTTTGAGAGCTGTTTaGTCAGCCTTTTCCAGAAAA +
Preference number: 3 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSILRAV*SAFSRK
Trigger: TTTTCTGGAAAAGGCTGACAAAACAGCTCTCAAAAT...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR CCA 72 bp TTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTaGGCTTTCACAGGCAGGATATACATAGCACATTCC +
Preference number: 3 (lower is better)
Translates to: LFLVSSSFSHMV*AFTGRIYIAHS
Trigger: GGAATGTGCTATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CCA 72 bp AACGGAAACACAGATATGTTTAAAATCCAACCATACTaGGATAGACAGGGCCCCTCTACAATTGCCTTTACT +
Preference number: 3 (lower is better)
Translates to: NGNTDMFKIQPY*DRQGPSTIAFT
Trigger: AGTAAAGGCAATTGTAGAGGGGCCCTGTCTATCCCAGTATGGTTGGATTTTAAACATATCTGTGTTTCCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CCA 72 bp CTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATaGACTTTTATGCGCATTTTTATCTCCTCTGGTTTT +
Preference number: 3 (lower is better)
Translates to: LSSTELCLSAAA*TFMRIFISSGF
Trigger: AAAACCAGAGGAGATAAAAATGCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR-3UTR CAA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAATTCTCTAGTAGACTGTaGGAAAATGAAAACGGTAAG +
Preference number: 3 (lower is better)
Translates to: AASCRAHKELHDICIDLKFSSRL*ENENGK
Trigger: CTTACCGTTTTCATTTTCCAACAGTCTACTAGAGAA...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR GCA 72 bp CATAATAAGGTTAAGAGTCAGGGTGTTGGCTGTACTTaGCCAAACTACAAATTAGAGGGCTACTACTCAATT +
Preference number: 3 (lower is better)
Translates to: HNKVKSQGVGCT*PNYKLEGYYSI
Trigger: AATTGAGTAGTAGCCCTCTAATTTGTAGTTTGGGCAAGTACAGCCAACACCCTGACTCTTAACCTTATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR GCA 72 bp AGTGACACTTTAGCTGATGGCACACTCTTACTATTCTaGTTCTGGGAAATAAATGCATTTGAACCATCCTGT +
Preference number: 3 (lower is better)
Translates to: SDTLADGTLLLF*FWEINAFEPSC
Trigger: ACAGGATGGTTCAAATGCATTTATTTCCCAGAAGCAGAATAGTAAGAGTGTGCCATCAGCTAAAGTGTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CCA 72 bp ACCAAAGATGAACAATCTAAACACAATAGTATCCATTaGCTAGGCTTTGCTCATTCTCATGGCACCAGTACT +
Preference number: 3 (lower is better)
Translates to: TKDEQSKHNSIH*LGFAHSHGTST
Trigger: AGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATGGATACTATTGTGTTTAGATTGTTCATCTTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR-3UTR CAA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTTTCTCTAGTAGACTGTaGGAAAATGAAAACGGTAAG +
Preference number: 3 (lower is better)
Translates to: MRFTEAEAPGLLITITYFFSSRL*ENENGK
Trigger: CTTACCGTTTTCATTTTCCAACAGTCTACTAGAGAA...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR TCA 72 bp AAAAAGAAGTTGAGGCTCTCTGATATGGACATACACTaGTTCATGAATGGGAAGACTAGACTAACACCTAAG +
Preference number: 3 (lower is better)
Translates to: KKKLRLSDMDIH*FMNGKTRLTPK
Trigger: CTTAGGTGTTAGTCTAGTCTTCCCATTCATGAATCAGTGTATGTCCATATCAGAGAGCCTCAACTTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR TCA 72 bp TTAAGTTTATGGAATTTGGACAATACACATGCTAGTTaGCAGGCACATCTGTTAACCCAAAAACAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: LSLWNLDNTHAS*QAHLLTQKQSS
Trigger: GCTGCTTTGTTTTTGGGTTAACAGATGTGCCTGTCAACTAGCATGTGTATTGTCCAAATTCCATAAACTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR TCA 72 bp GAAATAAATGCATTTGAACCATCCTGTGGTAAGGAATaGTCAACTCCTGTAAGTGCTAAATTCTCACTAGTC +
Preference number: 3 (lower is better)
Translates to: EINAFEPSCGKE*STPVSAKFSLV
Trigger: GACTAGTGAGAATTTAGCACTTACAGGAGTTGATCATTCCTTACCACAGGATGGTTCAAATGCATTTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCGGCAGCGGCGAAGGCTaGAGGCACTTCCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSGSGEG*RHFPAS
Trigger: TGACGCTGGGAAGTGCCTGCAGCCTTCGCCGCTGCC...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp CGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGGACGGGGCAACTGCGACTTaGCGAACTTCCGCTAAGCGT +
Preference number: 4 (lower is better)
Translates to: RVVTIGPSGPFIQFRMRDGATAT*RTSAKR
Trigger: ACGCTTAGCGGAAGTTCGTCAAGTCGCAGTTGCCCC...GTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CCA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCTGTCCTGAAGCAGATTaGCCGCCTGCTGGCGATAAG +
Preference number: 4 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSCPEAD*PPAGDK
Trigger: CTTATCGCCAGCAGGCGGCCAATCTGCTTCAGGACA...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CAA 72 bp CAACGCTTGCCCGGCAACATCTCCACACTGGTTAAGTaGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QRLPGNISTLVK*LDDSSETGREG
Trigger: GCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCCGGGCAAGCGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGAACACCCTGGGCACTaGGCAGGGAGTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: GSCCDHWPQWALYPVSNEEHPGH*AGSEAY
Trigger: ATATGCTTCACTCCCTGCTCAGTGCCCAGGGTGTTC...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp CGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGGACGCAATCTTGGCTGGATaGTCAAACACAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RVVTIGPSGPFIQFRMRDAILAG*SNTAPP
Trigger: TGGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGC...GTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp GGCAACATCTCCACACTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGAAGGCCACTTGTGTCTaGGCTATGCCCAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GNISTLVKLLDDSSETGRKATCV*AMPRHL
Trigger: CAGATGCCTGGGCATAGCTCAGACACAAGTGGCCTT...CCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCGCACTGAGCAGGGAGTaGAGCATATTCACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSALSRE*SIFTVS
Trigger: AGACACTGTGAATATGCTTCACTCCCTGCTCAGTGC...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTCTGTGCGGGGGCAACTaGGACTTGACGAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: DHQDVCSQYQLEVGNESALCGGN*DLTNFR
Trigger: GCGGAAGTTCGTCAAGTCGCAGTTGCCCCCGCACAG...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CCA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGCTGCTTTTGTTTTCTTaGCAGCCTCGCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSCCDHWPQWALYPVSNELLLFS*QPRMPS
Trigger: GGAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAG...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp AGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCACCAGACTGCTTTTGTTTTCTTaGCAGCCTCGCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RWWPGFVCIARSRGDSTRLLLFS*QPRMPS
Trigger: GGAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAG...TCTGGTGGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp CTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGACCATTGGCCCCAGTaGGCCCTTTATCCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: LVKLLDDSSETGREGTALDHWPQ*ALYPVS
Trigger: CGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTC...AAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp GGCAACATCTCCACACTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGCAATCTTGGCTGGATaGTCAAACACAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GNISTLVKLLDDSSETGRAILAG*SNTAPP
Trigger: TGGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGC...CCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp CTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTTCTCCAAAGGACAGCCAACGCTTaGCCGGCAACATCTCCACAC +
Preference number: 4 (lower is better)
Translates to: LACPPIPNAFEPVGSFLQRTANA*PATSPH
Trigger: GTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCT...TTGGAGAAAACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp CGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGGACTCCATGTTCTCCAGTTaGCTCTTCTGGGCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: RVVTIGPSGPFIQFRMRDSMFSS*LFWAAN
Trigger: ATTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGA...GTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp CTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTCGCCGGGTTGTTACTTaGCTCCGTAGAGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LVKLLDDSSETGREGTALRRVVT*LRRGSK
Trigger: TTTGCTTCCTCTACGGAGGCAAGTAACAACCCGGCG...AAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CCA 90 bp CGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGGACGCCAAAACGACGGGATaGGCTATTTTCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RVVTIGPSGPFIQFRMRDAKTTG*AIFQLF
Trigger: GAACAGCTGGAAAATAGCCCATCCCGTCGTTTTGGC...GTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGCCAGCTGTTCTCGAGTaGAATACCACCGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GSCCDHWPQWALYPVSNEPAVLE*NTTVCC
Trigger: ACAACAAACGGTGGTATTTCACTCGAGAACAGCTGG...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp CTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGTGGTAGAAGTTTCCATGTTCTCCAGTTaGCTCTTCTGGGCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: LDDSSETGREGTALVVEVSMFSS*LFWAAN
Trigger: ATTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGA...AACTTCTACCACAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCGACCTACTTCCGGAATaGACCTCGCTACACCCCGTA +
Preference number: 4 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSDLLPE*TSLHPV
Trigger: TACGGGGTGTAGCGAGGTGCATTCCGGAAGTAGGTC...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CCA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGTTCCCAGTACCAACTaGAAGTTGGGAATGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GSCCDHWPQWALYPVSNEVPSTN*KLGMRV
Trigger: CACTCTCATTCCCAACTTCCAGTTGGTACTGGGAAC...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTCAGGAAGGGATTCCTaGGGATGGAGACAAGTATGT +
Preference number: 4 (lower is better)
Translates to: LAASHALQFQMRLSLLGVSGRDS*GWRQVC
Trigger: ACATACTTGTCTCCATCCTCAGGAATCCCTTCCTGA...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCTTATCCAGTTTCGAATaGGGGACACGAGTTTTACAG +
Preference number: 4 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSLSSFE*GTRVLQ
Trigger: CTGTAAAACTCGTGTCCCTCATTCGAAACTGGATAA...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp GGCAACATCTCCACACTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGAGATTTACAGAAGCTaGGGCTCCAGGCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: GNISTLVKLLDDSSETGREIYRS*GSRPTY
Trigger: ATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTC...CCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCCGCAGGCGCGTCACGTaGCCGTTGGGCGGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFRRRVT*PLGGGV
Trigger: CACTCCACCGCCCAACGGTCACGTGACGCGCCTGCG...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR GCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCACTTGGCAGCCTCGCATaGCCTCCAATTCCAAATGCG +
Preference number: 4 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTALGSLA*PPIPNA
Trigger: CGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAAG...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GGCAACATCTCCACACTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGGGGTTTGTCTGTATTaGCAGATCTCGAGGAGATTC +
Preference number: 4 (lower is better)
Translates to: GNISTLVKLLDDSSETGRGVCLY*QISRRF
Trigger: GAATCTCCTCGAGATCTGGCAATACAGACAAACCCC...CCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTGGCTTCAATTAGCATaGTGTCAAGCATCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LAASHALQFQMRLSLLGVWLQLA*CQASLS
Trigger: GGAGAGGGATGCTTGACAGCATGCTAATTGAAGCCA...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CCA 90 bp CGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGGACGCAACATCTCCACACTaGTTAAGTTGCTGGATGACT +
Preference number: 4 (lower is better)
Translates to: RVVTIGPSGPFIQFRMRDATSPH*LSCWMT
Trigger: AGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGC...GTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp GGCAACATCTCCACACTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGCACGAGTTTTACAGCTaGGCTGTGAAAAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GNISTLVKLLDDSSETGRHEFYS*AVKRKG
Trigger: GCCTTTCCTTTTCACAGCCCAGCTGTAAAACTCGTG...CCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAAGACCATTGGCCCCAGTaGGCCCTTTATCCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQDHWPQ*ALYPVS
Trigger: CGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTC...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTCAAATTCAAATGCAGTaGGCTGAGTGGGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: LAASHALQFQMRLSLLGVQIQMQ*AEWAEH
Trigger: GTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTG...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CAA 72 bp TCTAGTTTGAAAGAAGGTTGGGAGGACAGCCAACGCTaGCCCGGCAACATCTCCACACTGGTTAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSLKEGWEDSQR*PGNISTLVKLL
Trigger: CAGCAACTTAACCAGTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTCCCAACCTTCTTTCAAACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CAA 72 bp GAGTTTTACAGCTGGGCTGTGAAAAGGAAAGGCCACTaGTGTCTGAGCTATGCCCAGGCATCTGACCCATTG +
Preference number: 4 (lower is better)
Translates to: EFYSWAVKRKGH*CLSYAQASDPL
Trigger: CAATGGGTCAGATGCCTGGGCATAGCTCAGACACAAGTGGCCTTTCCTTTTCACAGCCCAGCTGTAAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCCCGCTCGGGGTTTTCTaGACCCTCTATGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSPLGVF*TLYGHF
Trigger: AAAATGCCCATAGAGGGTTCAGAAAACCCCGAGCGG...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCAAGGCCACTTGTGTCTaGGCTATGCCCAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSKATCV*AMPRHL
Trigger: CAGATGCCTGGGCATAGCTCAGACACAAGTGGCCTT...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGTGGTAGAAGTTTGCTATGAGGCCAAATaGTTATGTGCCTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LDDSSETGREGTALVVEVCYEAK*LCASVV
Trigger: TACCACAGAGGCACATAATCATTTGGCCTCATAGCA...AACTTCTACCACAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp CGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGGACGGCAGAATAATATGCTaGGAAAGGACTCTTAAGAGC +
Preference number: 4 (lower is better)
Translates to: RVVTIGPSGPFIQFRMRDGRIIC*ERTLKS
Trigger: GCTCTTAAGAGTCCTTTCTCAGCATATTATTCTGCC...GTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACGGTAGCATCCAGAGCTaGGGTGCCCCAAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: MVERPRIQNVSLILHSFNGSIQS*GAPRKT
Trigger: TGTCTTCCTTGGGGCACCTCAGCTCTGGATGCTACC...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TTGTGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGGTAGCATCCAGAGCTaGGGTGCCCCAAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LCSRLFVTLSSTELCLSAGSIQS*GAPRKT
Trigger: TGTCTTCCTTGGGGCACCTCAGCTCTGGATGCTACC...AGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGTTCTGTTGGTTGCCATaGAGTAAGAAGTCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GSCCDHWPQWALYPVSNEFCWLP*SKKSVL
Trigger: TAGCACAGACTTCTTACTTCATGGCAACCAACAGAA...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp TCTGGCTACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAACTTGGCAGCCTCGCATaGCCTCCAATTCCAAATGCG +
Preference number: 4 (lower is better)
Translates to: SGYYVLDHQDVCSQYQLELGSLA*PPIPNA
Trigger: CGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAAG...TTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAAAGGACAGCCAACGCTTaGCCGGCAACATCTCCACAC +
Preference number: 4 (lower is better)
Translates to: AASCRAHKELHDICIDLKRTANA*PATSPH
Trigger: GTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCT...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCGGCAGCCAATTCTTCTaGATGCTTCGCGCGGTATTC +
Preference number: 4 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSGSQFF*MLRAVF
Trigger: GAATACCGCGCGAAGCATGCAGAAGAATTGGCTGCC...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp CTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGTGGTAGAAGTTTCCTCTACAGAATTGTaGTTATCAGCTGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LDDSSETGREGTALVVEVSSTEL*LSAAAW
Trigger: CCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGA...AACTTCTACCACAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp TTGAAAGAAGGTTGGGAGGACAGCCAACGCTTGCCCGGCAACATCTCCACACTGCCCACCAGGAGTTACTaGTATGTATCATATACACAC +
Preference number: 4 (lower is better)
Translates to: LKEGWEDSQRLPGNISTLPTRSY*YVSYTH
Trigger: GTGTGTATATGATACATAGCAGTAACTCCTGGTGGG...CAGTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTCCCAACCTTCTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR GCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGGGCAGAAGCTGGCCTTaGTCGCCAACCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: NRHCTYLKTVPGGINTERGRSWP*SPTLLP
Trigger: AGGAAGGAGGGTTGGCGAGCAAGGCCAGCTTCTGCC...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTCATCCAGAGCTGAGGTaGCCCAAGGAAGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPHPELR*PKEDRG
Trigger: GCCTCTGTCTTCCTTGGGGCACCTCAGCTCTGGATG...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGCATCCAGAGCTGAGGTaGCCCAAGGAAGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPHPELR*PKEDRG
Trigger: GCCTCTGTCTTCCTTGGGGCACCTCAGCTCTGGATG...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAACTGCTTTTGTTTTCTTaGCAGCCTCGCATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQLLLFS*QPRMPS
Trigger: GGAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAG...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCGTGACCGTTGGGCGGTaGAGTGGGGTTAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSVTVGR*SGVRSS
Trigger: AGAACTTCTAACCCCACTCCACCGCCCAACGGTCAC...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR CAA 72 bp GGGAGTGAAGCATATTCACAGTGTCTTGATAGTCTATaGTCTGGGTCGTGTTGTGACCATTGGCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GSEAYSQCLDSL*SGSCCDHWPQW
Trigger: CCACTGGGGCCAATGGTCACAACACGACCCAGACAATAGACTATCAAGACACTGTGAATATGCTTCACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCCCAGCTGTTCTCGAGTaGAATACCACCGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSPAVLE*NTTVCC
Trigger: ACAACAAACGGTGGTATTTCACTCGAGAACAGCTGG...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TCTGGCTACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAACCGCTCGGGGTTTTCTaGACCCTCTATGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: SGYYVLDHQDVCSQYQLEPLGVF*TLYGHF
Trigger: AAAATGCCCATAGAGGGTTCAGAAAACCCCGAGCGG...TTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTGAACACCCTGGGCACTaGGCAGGGAGTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPEHPGH*AGSEAY
Trigger: ATATGCTTCACTCCCTGCTCAGTGCCCAGGGTGTTC...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGAAAGGTCTCTAAACTaGCCTATGTCAGCAATGATC +
Preference number: 4 (lower is better)
Translates to: LVKLLDDSSETGREGTALERSLN*PMSAMI
Trigger: GATCATTGCTGACATAGGTCAGTTTAGAGACCTTTC...AAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTTCTGTTGGTTGCCATaGAGTAAGAAGTCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LAASHALQFQMRLSLLGVFCWLP*SKKSVL
Trigger: TAGCACAGACTTCTTACTTCATGGCAACCAACAGAA...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTAAGGACAGCCAACGCTTaGCCGGCAACATCTCCACAC +
Preference number: 4 (lower is better)
Translates to: HCTYLKTVPGGINTERSLRTANA*PATSPH
Trigger: GTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCT...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTTCCATGTTCTCCAGTTaGCTCTTCTGGGCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLSMFSS*LFWAAN
Trigger: ATTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGA...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGTGGTAGAAGTTATTGTGCTTATCAGCTaGAGCATGGACTTTTATGCG +
Preference number: 4 (lower is better)
Translates to: LDDSSETGREGTALVVEVIVLIS*SMDFYA
Trigger: CGCATAAAAGTCCATGCTGCAGCTGATAAGCACAAT...AACTTCTACCACAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp TGTTCTCCAGTTGCCTCTTCTGGGCAGCCAATTCTTCTGCATGCTTCGCGCGGTTTGTGCTTTTCTTTGTaGTCTCGGCTCTTTGTAACA +
Preference number: 4 (lower is better)
Translates to: CSPVASSGQPILLHASRGLCFSL*SRLFVT
Trigger: TGTTACAAAGAGCCGAGAGCACAAAGAAAAGCACAA...ACCGCGCGAAGCATGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTGGGGTTTGTCTGTATTaGCAGATCTCGAGGAGATTC +
Preference number: 4 (lower is better)
Translates to: DHQDVCSQYQLEVGNESAGVCLY*QISRRF
Trigger: GAATCTCCTCGAGATCTGGCAATACAGACAAACCCC...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACGGCAGAAGCTGGCCTTaGTCGCCAACCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDGRSWP*SPTLLP
Trigger: AGGAAGGAGGGTTGGCGAGCAAGGCCAGCTTCTGCC...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAAAAAGCAGCAGCTTCATaGAGAGCCCACAAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQKAAAS*RAHKEL
Trigger: AAGCTCCTTGTGGGCTCTGCATGAAGCTGCTGCTTT...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTACCGATTTGGATCGATaGTTCACTACAGTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LAASHALQFQMRLSLLGVTDLDR*FTTVQL
Trigger: TAGCTGAACTGTAGTGAAGCATCGATCCAAATCGGT...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR GCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAGGGCCCCTCTACAATTaGCTTTACTTGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTAGPLYN*LYLEAM
Trigger: CATGGCTTCCAAGTAAAGGCAATTGTAGAGGGGCCC...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTGTCAGTTCTGTTGGTTaGCATGAAGTAAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LAASHALQFQMRLSLLGVVSSVG*HEVRSL
Trigger: CAGACTTCTTACTTCATGGCAACCAACAGAACTGAC...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp GTCACTATAAGGACGAACAAATTCAAATGCAGTGGGCTGAGTGGGCTGAACACCGCCAAAACGACGGGATaGGCTATTTTCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: VTIRTNKFKCSGLSGLNTAKTTG*AIFQLF
Trigger: GAACAGCTGGAAAATAGCCCATCCCGTCGTTTTGGC...GGTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGTCCTTATAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATGTCCTGAAGCAGATTaGCCGCCTGCTGGCGATAAG +
Preference number: 4 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKCPEAD*PPAGDK
Trigger: CTTATCGCCAGCAGGCGGCCAATCTGCTTCAGGACA...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCCTAGCTTCTCCCATATaGTTTGGGCTTTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSLASPI*FGLSQA
Trigger: TGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAG...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTTCTCCAAAAAATCCAACCATACTaGGATAGACAGGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LACPPIPNAFEPVGSFLQKIQPY*DRQGPS
Trigger: AGAGGGGCCCTGTCTATCCCAGTATGGTTGGATTTT...TTGGAGAAAACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CCA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTGGAAGACAGAGGCAATaGCAGAATAATATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LAASHALQFQMRLSLLGVGRQRQ*QNNMLR
Trigger: TCTCAGCATATTATTCTGCCATTGCCTCTGTCTTCC...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR CAA 72 bp TCCAACCATACTGGGATAGACAGGGCCCCTCTACAATaGCCTTTACTTGGAAGCCATGTATGTGGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SNHTGIDRAPLQ*PLLGSHVCGGV
Trigger: TACTCCTCCACATACATGGCTTCCAAGTAAAGGCAATTGTAGAGGGGCCCTGTCTATCCCAGTATGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CAA 72 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTaGAGCCTGTTGGGAGTTTTCTCCAAAATCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LAASHALQFQMR*SLLGVFSKICR
Trigger: TCTACAGATTTTGGAGAAAACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CAA 72 bp CTGAAGTCTTTTCATCTGTTCCTCGGTCATCTGCTTTaGTTTTCTTGGCAGCCTCGCATGCCCTCCAATTCC +
Preference number: 4 (lower is better)
Translates to: LKSFHLFLGHLL*FSWQPRMPSNS
Trigger: GGAATTGGAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAGATGACCGAGGAACAGATGAAAAGACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp GTCACTATAAGGACGAACAAATTCAAATGCAGTGGGCTGAGTGGGCTGAACACCCCAGCTGTTCTCGAGTaGAATACCACCGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VTIRTNKFKCSGLSGLNTPAVLE*NTTVCC
Trigger: ACAACAAACGGTGGTATTTCACTCGAGAACAGCTGG...GGTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGTCCTTATAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAACCGCTCGGGGTTTTCTaGACCCTCTATGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: AASCRAHKELHDICIDLKPLGVF*TLYGHF
Trigger: AAAATGCCCATAGAGGGTTCAGAAAACCCCGAGCGG...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTCTGGGATTCTCATTTTaGGAGCTGTTTTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: DHQDVCSQYQLEVGNESALGFSF*ELFCQP
Trigger: AGGCTGACAAAACAGCTCTCAAAATGAGAATCCCAG...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTGCAATCTTGGCTGGATaGTCAAACACAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPAILAG*SNTAPP
Trigger: TGGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGC...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTAAAGGCCACTTGTGTCTaGGCTATGCCCAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: HCTYLKTVPGGINTERSLKATCV*AMPRHL
Trigger: CAGATGCCTGGGCATAGCTCAGACACAAGTGGCCTT...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GGCAACATCTCCACACTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGATGGAGACAAGTATGTaGTACCTTGATGACATGTTC +
Preference number: 4 (lower is better)
Translates to: GNISTLVKLLDDSSETGRMETSM*YLDDMF
Trigger: GAACATGTCATCAAGGTAGCACATACTTGTCTCCAT...CCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp TTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATACTTGGCAGCCTCGCATaGCCTCCAATTCCAAATGCG +
Preference number: 4 (lower is better)
Translates to: FLVSSSFSHMVWAFTGRILGSLA*PPIPNA
Trigger: CGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAAG...TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCATATTGAGGATTGTCTaGTCTGAAGTCTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSILRIV*SEVFSS
Trigger: AGATGAAAAGACTTCAGAGCAGACAATCCTCAATAT...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp GTCACTATAAGGACGAACAAATTCAAATGCAGTGGGCTGAGTGGGCTGAACACCGCCAATTCTTCTGCATaGTTCGCGCGGTATTCTTTC +
Preference number: 4 (lower is better)
Translates to: VTIRTNKFKCSGLSGLNTANSSA*FARYSF
Trigger: GAAAGAATACCGCGCGAAGCATGCAGAAGAATTGGC...GGTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGTCCTTATAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp GTCACTATAAGGACGAACAAATTCAAATGCAGTGGGCTGAGTGGGCTGAACACCACGAACAAATTCAAATaGAGTGGGCTGAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VTIRTNKFKCSGLSGLNTTNKFK*SGLSGL
Trigger: CAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGT...GGTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGTCCTTATAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTGTCCTGAAGCAGATTaGCCGCCTGCTGGCGATAAG +
Preference number: 4 (lower is better)
Translates to: NRHCTYLKTVPGGINTERCPEAD*PPAGDK
Trigger: CTTATCGCCAGCAGGCGGCCAATCTGCTTCAGGACA...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATAGTTCCAAGGTCACAGTaGCGTCAACATACTCCCACC +
Preference number: 4 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIVPRSQ*RQHTPT
Trigger: GGTGGGAGTATGTTGACGCCACTGTGACCTTGGAAC...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261900.8
CDS-3UTR CCA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGCACTGGTTAAGTTGCTaGATGACTCTTCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKHWLSC*MTLRRL
Trigger: CAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTG...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCTCCAGTTGCCTCTTCTaGGCAGCCAATTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSSSCLF*AANSSA
Trigger: TGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGA...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTATCTCCACCTGCCACTaGGATTCTCATTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLISTCH*DSHFES
Trigger: GCTCTCAAAATGAGAATCCCAGTGGCAGGTGGAGAT...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCACACGAGTTTTACAGCTaGGCTGTGAAAAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTAHEFYS*AVKRKG
Trigger: GCCTTTCCTTTTCACAGCCCAGCTGTAAAACTCGTG...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATAGACCATTGGCCCCAGTaGGCCCTTTATCCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: FLVSSSFSHMVWAFTGRIDHWPQ*ALYPVS
Trigger: CGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTC...TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTCAAATTCAAATGCAGTaGGCTGAGTGGGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLQIQMQ*AEWAEH
Trigger: GTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTG...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTCCATTTTTCAGCTCTaGCAAGAAGAGGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: LAASHALQFQMRLSLLGVSIFQL*QEEGRY
Trigger: ATATCTTCCCTCTTCTTGCCAGAGCTGAAAAATGGA...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTAATTCCAAATGCGTTTaGGCCTGTTGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: DHQDVCSQYQLEVGNESANSKCV*ACWEFS
Trigger: AGAAAACTCCCAACAGGCTCAAACGCATTTGGAATT...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAGAGGATTGTCTGCTCTaGAGTCTTTTCATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTAEDCLL*SLFICS
Trigger: GGAACAGATGAAAAGACTTCAGAGCAGACAATCCTC...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TTGTGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCACTGAGCAGGGAGTaGAGCATATTCACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LCSRLFVTLSSTELCLSAALSRE*SIFTVS
Trigger: AGACACTGTGAATATGCTTCACTCCCTGCTCAGTGC...AGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTGAACACCCTGGGCACTaGGCAGGGAGTGAAGCATAT +
Preference number: 4 (lower is better)
Translates to: MRFTEAEAPGLLITITYFEHPGH*AGSEAY
Trigger: ATATGCTTCACTCCCTGCTCAGTGCCCAGGGTGTTC...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCGGATCCACAATTGTCTaGTACAAGAAACCCTCCATT +
Preference number: 4 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSGSTIV*YKKPSI
Trigger: AATGGAGGGTTTCTTGTATCAGACAATTGTGGATCC...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCATTCCTCAGCTTCAACTaGAGAGTTCCTGATTACCTG +
Preference number: 4 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTAFLSFN*RVPDYL
Trigger: CAGGTAATCAGGAACTCTTCAGTTGAAGCTGAGGAA...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCGGCAGAATAATATGCTaGGAAAGGACTCTTAAGAGC +
Preference number: 4 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSGRIIC*ERTLKS
Trigger: GCTCTTAAGAGTCCTTTCTCAGCATATTATTCTGCC...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTACAGGAGGTGTGTACTaGAGGCTAAATGTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLTGGVY*RLNVVK
Trigger: TTTGACCACATTTAGCCTGCAGTACACACCTCCTGT...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261900.8
CDS-3UTR GCA 90 bp ACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGACCACACTGGTTAAGTTaGTGGATGACTCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: TMFWITRTFVPSTNWKLGPHWLS*WMTLRR
Trigger: TCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGG...TCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGGGCAGCCAATTCTTCTaGATGCTTCGCGCGGTATTC +
Preference number: 4 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMGSQFF*MLRAVF
Trigger: GAATACCGCGCGAAGCATGCAGAAGAATTGGCTGCC...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp TTGAAAGAAGGTTGGGAGGACAGCCAACGCTTGCCCGGCAACATCTCCACACTGTTTTATGTGCTAAGTTaGTTGTCTGGCTACTATGTT +
Preference number: 4 (lower is better)
Translates to: LKEGWEDSQRLPGNISTLFYVLS*LSGYYV
Trigger: AACATAGTAGCCAGACAAGCAACTTAGCACATAAAA...CAGTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTCCCAACCTTCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp CACATTCCCCATCTCTTAGAGACCTTAAGACTGCTCTCATTTGAACACTTTCCCCCATTGGCTAGGCTTTaGTCATTCTCATGGCACCAG +
Preference number: 4 (lower is better)
Translates to: HIPHLLETLRLLSFEHFPPLARL*SFSWHQ
Trigger: CTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATGG...GGGAAAGTGTTCAAATGAGAGCAGTCTTAAGGTCTCTAAGAGATGGGGAATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAATTCAAATATGCAAGATaGAGGGCACTAACCCACCGT +
Preference number: 4 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQFKYAR*RALTHR
Trigger: ACGGTGGGTTAGTGCCCTGCATCTTGCATATTTGAA...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGAAAGCAGCAGCTTCATaGAGAGCCCACAAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPKAAAS*RAHKEL
Trigger: AAGCTCCTTGTGGGCTCTGCATGAAGCTGCTGCTTT...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCGGGCCCCTCTACAATTaGCTTTACTTGGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSGPLYN*LYLEAM
Trigger: CATGGCTTCCAAGTAAAGGCAATTGTAGAGGGGCCC...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTGCCAAAACGACGGGATaGGCTATTTTCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPAKTTG*AIFQLF
Trigger: GAACAGCTGGAAAATAGCCCATCCCGTCGTTTTGGC...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GCCCTTTATCCAGTTTCGAATGAGGGACACGAGTTTTACAGCTGGGCTGTGAAAGCAACATCTCCACACTaGTTAAGTTGCTGGATGACT +
Preference number: 4 (lower is better)
Translates to: ALYPVSNEGHEFYSWAVKATSPH*LSCWMT
Trigger: AGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGC...TTTCACAGCCCAGCTGTAAAACTCGTGTCCCTCATTCGAAACTGGATAAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp TCTGGCTACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAAGTTTGAAAGAAGGTTaGGAGGACAGCCAACGCTTG +
Preference number: 4 (lower is better)
Translates to: SGYYVLDHQDVCSQYQLESLKEG*EDSQRL
Trigger: CAAGCGTTGGCTGTCCTCCCAACCTTCTTTCAAACT...TTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCAGTTTGAAAGAAGGTTaGGAGGACAGCCAACGCTTG +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSSLKEG*EDSQRL
Trigger: CAAGCGTTGGCTGTCCTCCCAACCTTCTTTCAAACT...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTGTGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTTCCAGTTGCCTCTTCTaGGCAGCCAATTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LCSRLFVTLSSTELCLSASSCLF*AANSSA
Trigger: TGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGA...AGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp CTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGTGGTAGAAGTTATGATGATGATTAGATaGGTGAGTCTTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LDDSSETGREGTALVVEVMMMIR*VSLVLF
Trigger: GAAAAGCACAAGACTCACCCATCTAATCATCATCAT...AACTTCTACCACAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAACTTGGCAATCTTGGCTaGATGATCAAACACAGCCCC +
Preference number: 4 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKLGNLG*MIKHSP
Trigger: GGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAG...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCCACGAGTTTTACAGCTaGGCTGTGAAAAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSHEFYS*AVKRKG
Trigger: GCCTTTCCTTTTCACAGCCCAGCTGTAAAACTCGTG...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTTCACTGAAAGCTTACTaGAACCTCGGAGGGCTATTT +
Preference number: 4 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLSLKAY*NLGGLF
Trigger: AAATAGCCCTCCGAGGTTCCAGTAAGCTTTCAGTGA...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTTCTCCAATCTCCATGCTTAACATaGCAACACAAAACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LACPPIPNAFEPVGSFLQSPCLT*QHKTQE
Trigger: CTCTTGGGTTTTGTGTTGCCATGTTAAGCATGGAGA...TTGGAGAAAACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
3UTR CAA 72 bp AGATTCTGGGCAGCATATGCATATTGTGACTTCACATaGGCTTCCATGTTCTCCAGTTGCCTCTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RFWAAYAYCDFT*ASMFSSCLFWA
Trigger: TGCCCAGAAGAGGCAACTGGAGAACATGGAAGCCAATGTGAAGTCACAATATGCATATGCTGCCCAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CAA 72 bp TGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATaGTGCTTATCAGCTGCAGCATGGACTTTTATGCGC +
Preference number: 4 (lower is better)
Translates to: CSRLFVTLSSTE*CLSAAAWTFMR
Trigger: GCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
3UTR CAA 72 bp GGCACTGAGCAGGGAGTGAAGCATATTCACAGTGTCTaGATAGTCTATTGTCTGGGTCGTGTTGTGACCATT +
Preference number: 4 (lower is better)
Translates to: GTEQGVKHIHSV*IVYCLGRVVTI
Trigger: AATGGTCACAACACGACCCAGACAATAGACTATCAAGACACTGTGAATATGCTTCACTCCCTGCTCAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAAAATTCCAAATGCGTTTaGGCCTGTTGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQNSKCV*ACWEFS
Trigger: AGAAAACTCCCAACAGGCTCAAACGCATTTGGAATT...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGAATTCCAAATGCGTTTaGGCCTGTTGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKNSKCV*ACWEFS
Trigger: AGAAAACTCCCAACAGGCTCAAACGCATTTGGAATT...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp ACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGATATCTCCTCTGGTTTTaGAGACGCAGCTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: TMFWITRTFVPSTNWKLGYLLWF*RRSFIS
Trigger: GGAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATA...TCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGGCACTGAGCAGGGAGTaGAGCATATTCACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: NRHCTYLKTVPGGINTERALSRE*SIFTVS
Trigger: AGACACTGTGAATATGCTTCACTCCCTGCTCAGTGC...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCGGATCCACAATTGTCTaGTACAAGAAACCCTCCATT +
Preference number: 4 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSGSTIV*YKKPSI
Trigger: AATGGAGGGTTTCTTGTATCAGACAATTGTGGATCC...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAAGACCTATGTCAGCAATaGTCTACTAGTGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKDLCQQ*STSAKA
Trigger: GGCCTTTGCACTAGTAGATCATTGCTGACATAGGTC...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CACATTCCCCATCTCTTAGAGACCTTAAGACTGCTCTCATTTGAACACTTTCCCGACCTATGTCAGCAATaGTCTACTAGTGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: HIPHLLETLRLLSFEHFPDLCQQ*STSAKA
Trigger: GGCCTTTGCACTAGTAGATCATTGCTGACATAGGTC...GGGAAAGTGTTCAAATGAGAGCAGTCTTAAGGTCTCTAAGAGATGGGGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp GTCACTATAAGGACGAACAAATTCAAATGCAGTGGGCTGAGTGGGCTGAACACCAATACACATGCTAGTTaGCAGGCACATCTGTTAACC +
Preference number: 4 (lower is better)
Translates to: VTIRTNKFKCSGLSGLNTNTHAS*QAHLLT
Trigger: GGTTAACAGATGTGCCTGTCAACTAGCATGTGTATT...GGTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGTCCTTATAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTCAACTGAAGAGTTCCTaGTTACCTGATGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLQLKSS*LPDEGH
Trigger: ATGTCCTTCATCAGGTAATCAGGAACTCTTCAGTTG...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACTGCAAGCCAGGTGAATaGAGACACAGGCCACCACAG +
Preference number: 4 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNCKPGE*RHRPPQ
Trigger: CTGTGGTGGCCTGTGTCTGCATTCACCTGGCTTGCA...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261900.8
CDS-3UTR GCA 90 bp CTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGTGGTAGAAGTTACACTCTTACTATTCTaGTTCTGGGAAATAAATGCA +
Preference number: 4 (lower is better)
Translates to: LDDSSETGREGTALVVEVTLLLF*FWEINA
Trigger: TGCATTTATTTCCCAGAAGCAGAATAGTAAGAGTGT...AACTTCTACCACAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACGCCAATTCTTCTGCATaGTTCGCGCGGTATTCTTTC +
Preference number: 4 (lower is better)
Translates to: MVERPRIQNVSLILHSFNANSSA*FARYSF
Trigger: GAAAGAATACCGCGCGAAGCATGCAGAAGAATTGGC...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAAATTGTGCTTATCAGCTaGAGCATGGACTTTTATGCG +
Preference number: 4 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQIVLIS*SMDFYA
Trigger: CGCATAAAAGTCCATGCTGCAGCTGATAAGCACAAT...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAATTGTGCTTATCAGCTaGAGCATGGACTTTTATGCG +
Preference number: 4 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTAIVLIS*SMDFYA
Trigger: CGCATAAAAGTCCATGCTGCAGCTGATAAGCACAAT...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTTTTTATGTGCTAAGTTaGTTGTCTGGCTACTATGTT +
Preference number: 4 (lower is better)
Translates to: LVKLLDDSSETGREGTALFYVLS*LSGYYV
Trigger: AACATAGTAGCCAGACAAGCAACTTAGCACATAAAA...AAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAAACGAACAAATTCAAATaGAGTGGGCTGAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AASCRAHKELHDICIDLKTNKFK*SGLSGL
Trigger: CAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGT...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCGGCCAAATGATTATGTaGCTCTGTGGTAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSGQMIM*LCGKGV
Trigger: CACTCCTTTACCACAGAGGCACATAATCATTTGGCC...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAATGGCTTCAATTAGCATaGTGTCAAGCATCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AASCRAHKELHDICIDLKWLQLA*CQASLS
Trigger: GGAGAGGGATGCTTGACAGCATGCTAATTGAAGCCA...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATACACTGGTTAAGTTGCTaGATGACTCTTCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIHWLSC*MTLRRL
Trigger: CAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTG...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCACTGGCTACTATGTTTTaGATCACCAGGACGTTTGTT +
Preference number: 4 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTALATMF*ITRTFV
Trigger: AACAAACGTCCTGGTGATCCAAAACATAGTAGCCAG...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATACAAATTCAAATGCAGTaGGCTGAGTGGGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIQIQMQ*AEWAEH
Trigger: GTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTG...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTACTACAGTACGGCCATaGATAACTGCTATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPTTVRP*ITAMRP
Trigger: TGGCCTCATAGCAGTTATCCATGGCCGTACTGTAGT...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATAACTACAGTACGGCCATaGATAACTGCTATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYITTVRP*ITAMRP
Trigger: TGGCCTCATAGCAGTTATCCATGGCCGTACTGTAGT...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGTTCAGAAGACCGATTTaGATCGATGCTTCACTACAG +
Preference number: 4 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKFRRPI*IDASLQ
Trigger: CTGTAGTGAAGCATCGATCCAAATCGGTCTTCTGAA...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CCA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAACAATTGCCTTTACTTaGAAGCCATGTATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTATIAFT*KPCMWR
Trigger: CCTCCACATACATGGCTTCCAAGTAAAGGCAATTGT...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CAA 72 bp CATGGACTTTTATGCGCATTTTTATCTCCTCTGGTTTaGAAGACGCAGCTTTATCTCCACCTGCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: HGLLCAFLSPLV*KTQLYLHLPLG
Trigger: TCCCAGTGGCAGGTGGAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATAAAAATGCGCATAAAAGTCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAATATCTCCTCTGGTTTTaGAGACGCAGCTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: AASCRAHKELHDICIDLKYLLWF*RRSFIS
Trigger: GGAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATA...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTTATCTCCTCTGGTTTTaGAGACGCAGCTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPYLLWF*RRSFIS
Trigger: GGAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATA...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGAAGACTGCTCTCATTTaGACACTTTCCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPKTALI*TLSQSL
Trigger: GAGGCTTTGGGAAAGTGTTCAAATGAGAGCAGTCTT...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTGCTATGAGGCCAAATaGTTATGTGCCTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSCYEAK*LCASVV
Trigger: TACCACAGAGGCACATAATCATTTGGCCTCATAGCA...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCGAAGTTGAGGCTCTCTaGTATGGACATACACTGATT +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSEVEAL*YGHTLI
Trigger: AATCAGTGTATGTCCATATCAGAGAGCCTCAACTTC...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCGCAGTGATGTCACCATaGTTTTATTTCCATATCCTA +
Preference number: 4 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSAVMSP*FYFHIL
Trigger: TAGGATATGGAAATAAAATCATGGTGACATCACTGC...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTAGGTATCAAAGTCACTaGAAGCTTACTGGAACCTCG +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPRYQSH*KLTGTS
Trigger: CGAGGTTCCAGTAAGCTTTCAGTGACTTTGATACCT...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TTGTGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTAGGTATCAAAGTCACTaGAAGCTTACTGGAACCTCG +
Preference number: 4 (lower is better)
Translates to: LCSRLFVTLSSTELCLSARYQSH*KLTGTS
Trigger: CGAGGTTCCAGTAAGCTTTCAGTGACTTTGATACCT...AGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCCAACTGAAGAGTTCCTaGTTACCTGATGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSQLKSS*LPDEGH
Trigger: ATGTCCTTCATCAGGTAATCAGGAACTCTTCAGTTG...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTTTCCTCAGCTTCAACTaGAGAGTTCCTGATTACCTG +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPFLSFN*RVPDYL
Trigger: CAGGTAATCAGGAACTCTTCAGTTGAAGCTGAGGAA...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGCTAAATGTGGTCAAATaGAGGCTGTTGGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPLNVVK*RLLVAM
Trigger: CATGGCAACCAACAGCCTGCATTTGACCACATTTAG...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261900.8
CDS-3UTR GCA 90 bp CACATTCCCCATCTCTTAGAGACCTTAAGACTGCTCTCATTTGAACACTTTCCCTGTTCCTCGGTCATCTaGTTTTGTTTTCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HIPHLLETLRLLSFEHFPCSSVI*FCFLGS
Trigger: GCTGCCAAGAAAACAAAAGCAGATGACCGAGGAACA...GGGAAAGTGTTCAAATGAGAGCAGTCTTAAGGTCTCTAAGAGATGGGGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTTGGATCACCAGGACGTTTGCCACACTGGTTAAGTTaGTGGATGACTCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: LCAKLLVWLLCFGSPGRLPHWLS*WMTLRR
Trigger: TCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGG...CAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGTCCTCTACAGAATTGTaGTTATCAGCTGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPSSTEL*LSAAAW
Trigger: CCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGA...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTGGCCAAATGATTATGTaGCTCTGTGGTAAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPGQMIM*LCGKGV
Trigger: CACTCCTTTACCACAGAGGCACATAATCATTTGGCC...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTTCTCCAACATATCCTAATCCATTaGTGTTTGCAACTGGAGATT +
Preference number: 4 (lower is better)
Translates to: LACPPIPNAFEPVGSFLQHILIH*CLQLEI
Trigger: AATCTCCAGTTGCAAACAGCAATGGATTAGGATATG...TTGGAGAAAACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CCA 90 bp TTGTGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTAGAAAGTTCTTTATCTaGGTCCACGCCAAAACGACG +
Preference number: 4 (lower is better)
Translates to: LCSRLFVTLSSTELCLSARKFFI*VHAKTT
Trigger: CGTCGTTTTGGCGTGGACCCAGATAAAGAACTTTCT...AGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCTCATTAAACCTGCAATaGTTGTGTCTGAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSSLNLQ*LCLKSS
Trigger: AGAGCTCTTCAGACACAACCATTGCAGGTTTAATGA...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp GCCCTTTATCCAGTTTCGAATGAGGGACACGAGTTTTACAGCTGGGCTGTGAAAATTGTGACTTCACATTaGCTTCCATGTTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ALYPVSNEGHEFYSWAVKIVTSH*LPCSPV
Trigger: AACTGGAGAACATGGAAGCCAATGTGAAGTCACAAT...TTTCACAGCCCAGCTGTAAAACTCGTGTCCCTCATTCGAAACTGGATAAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp TTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTTGGATCACCAGGACGTTTGATCTCCACCTGCCACTaGGATTCTCATTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LCAKLLVWLLCFGSPGRLISTCH*DSHFES
Trigger: GCTCTCAAAATGAGAATCCCAGTGGCAGGTGGAGAT...CAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTCTTGGCAATCTTGGCTaGATGATCAAACACAGCCCC +
Preference number: 4 (lower is better)
Translates to: MRFTEAEAPGLLITITYFLGNLG*MIKHSP
Trigger: GGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAG...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CAGGAGTTACTGCTATGTATCATATACACACAGCAAAATCCCTATCCCCTTCCCTTCTCCCATATGGTTTaGGCTTTCACAGGCAGGATA +
Preference number: 4 (lower is better)
Translates to: QELLLCIIYTQQNPYPLPFSHMV*AFTGRI
Trigger: TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAA...GGGAAGGGGATAGGGATTTTGCTGTGTGTATATGATACATAGCAGTAACTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCTTCAGAAGACCGATTTaGATCGATGCTTCACTACAG +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSFRRPI*IDASLQ
Trigger: CTGTAGTGAAGCATCGATCCAAATCGGTCTTCTGAA...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCACTGAAAGCTTACTaGAACCTCGGAGGGCTATTT +
Preference number: 4 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSSLKAY*NLGGLF
Trigger: AAATAGCCCTCCGAGGTTCCAGTAAGCTTTCAGTGA...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCCACTCAGTTAAAAGCTaGGTGTTAACAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSHSVKS*VLTSSN
Trigger: GTTGCTGCTTGTTAACACCCAGCTTTTAACTGAGTG...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCAGGACATACTTGCTCTaGCTTCAATTAGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSRTYLL*LQLACC
Trigger: ACAGCATGCTAATTGAAGCCAGAGCAAGTATGTCCT...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTAGGAAGACAGAGGCAATaGCAGAATAATATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLGRQRQ*QNNMLR
Trigger: TCTCAGCATATTATTCTGCCATTGCCTCTGTCTTCC...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CAA 72 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTaGCATAGACTGCTTAAATTCTCCCAAGACCAAAAG +
Preference number: 4 (lower is better)
Translates to: GTSEGYFSPFDE*HRLLKFSQDQK
Trigger: CTTTTGGTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CAA 72 bp AGCTTACTGGAACCTCGGAGGGCTATTTCTCACCATTaGATGAGTTGCATAGACTGCTTAAATTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SLLEPRRAISHH*MSCIDCLNSPK
Trigger: CTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCCAGTAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CAA 72 bp CAGACTACTCTATCAGGCAGGATTACTGTACCGTGCTaGTTTCAAACTCACATCCACGGAGGGATAAAAAGA +
Preference number: 4 (lower is better)
Translates to: QTTLSGRITVPC*FQTHIHGGIKR
Trigger: TCTTTTTATCCCTCCGTGGATGTGAGTTTGAAACAAGCACGGTACAGTAATCCTGCCTGATAGAGTAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGGGCTGTTGGTTGCCATaGAGTAAGAAGTCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQGCWLP*SKKSVL
Trigger: TAGCACAGACTTCTTACTTCATGGCAACCAACAGCC...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261900.8
CDS-3UTR TCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGGAGGATTGTCTGCTCTaGAGTCTTTTCATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: NRHCTYLKTVPGGINTEREDCLL*SLFICS
Trigger: GGAACAGATGAAAAGACTTCAGAGCAGACAATCCTC...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGGAGGATTGTCTGCTCTaGAGTCTTTTCATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMEDCLL*SLFICS
Trigger: GGAACAGATGAAAAGACTTCAGAGCAGACAATCCTC...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTTTATCCAGTTTCGAATaGGGGACACGAGTTTTACAG +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPLSSFE*GTRVLQ
Trigger: CTGTAAAACTCGTGTCCCTCATTCGAAACTGGATAA...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAAACACACTTAAAAGTCTaGAAAAAGTGGCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: AASCRAHKELHDICIDLKTHLKV*KKWPEP
Trigger: AGGCTCAGGCCACTTTTTTCAGACTTTTAAGTGTGT...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTTCAAAATCAAACCAGTaGTCATCAAGTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLSKSNQ*SSSPQR
Trigger: TCTTTGTGGACTTGATGATCACTGGTTTGATTTTGA...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp GTCACTATAAGGACGAACAAATTCAAATGCAGTGGGCTGAGTGGGCTGAACACCCAGTGTGATACAACATaGAAATCTCCTAAACCATCA +
Preference number: 4 (lower is better)
Translates to: VTIRTNKFKCSGLSGLNTQCDTT*KSPKPS
Trigger: TGATGGTTTAGGAGATTTTCATGTTGTATCACACTG...GGTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGTCCTTATAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR GCA 90 bp GTCACTATAAGGACGAACAAATTCAAATGCAGTGGGCTGAGTGGGCTGAACACCCTCGAACAAGTTGAGTaGACTTTACTACATGAGTAT +
Preference number: 4 (lower is better)
Translates to: VTIRTNKFKCSGLSGLNTLEQVE*TLLHEY
Trigger: ATACTCATGTAGTAAAGTGCACTCAACTTGTTCGAG...GGTGTTCAGCCCACTCAGCCCACTGCATTTGAATTTGTTCGTCCTTATAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACACATACTCCCACCAGTaGTTCCCGTCAGTTGAGACT +
Preference number: 4 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNTYSHQ*FPSVET
Trigger: AGTCTCAACTGACGGGAAGCACTGGTGGGAGTATGT...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261900.8
CDS-3UTR GCA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGTGTTCCTCGGTCATCTaGTTTTGTTTTCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMCSSVI*FCFLGS
Trigger: GCTGCCAAGAAAACAAAAGCAGATGACCGAGGAACA...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACGCCAATTCTTCTGCATaGTTCGCGCGGTATTCTTTC +
Preference number: 4 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDANSSA*FARYSF
Trigger: GAAAGAATACCGCGCGAAGCATGCAGAAGAATTGGC...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACGGCAGCCAATTCTTCTaGATGCTTCGCGCGGTATTC +
Preference number: 4 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANGSQFF*MLRAVF
Trigger: GAATACCGCGCGAAGCATGCAGAAGAATTGGCTGCC...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGTCCTCTACAGAATTGTaGTTATCAGCTGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMSSTEL*LSAAAW
Trigger: CCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGA...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTATTGTGCTTTTCTTTGTaGTCTCGGCTCTTTGTAACA +
Preference number: 4 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLLCFSL*SRLFVT
Trigger: TGTTACAAAGAGCCGAGAGCACAAAGAAAAGCACAA...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGGGGGTTTGTCTGTATTaGCAGATCTCGAGGAGATTC +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQGVCLY*QISRRF
Trigger: GAATCTCCTCGAGATCTGGCAATACAGACAAACCCC...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTAAGGATTACTGTACCGTaGTTGTTTCAAACTCACATC +
Preference number: 4 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLRITVP*LFQTHI
Trigger: GATGTGAGTTTGAAACAAGCACGGTACAGTAATCCT...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CACATTCCCCATCTCTTAGAGACCTTAAGACTGCTCTCATTTGAACACTTTCCCAAGCATCCCTCTCCATaGTTAACATGGCAACACAAA +
Preference number: 4 (lower is better)
Translates to: HIPHLLETLRLLSFEHFPKHPSP*LTWQHK
Trigger: TTTGTGTTGCCATGTTAAGCATGGAGAGGGATGCTT...GGGAAAGTGTTCAAATGAGAGCAGTCTTAAGGTCTCTAAGAGATGGGGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp ACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAGTGTCTGAAGAGCTCTaGGAAATCATATTGAGGATT +
Preference number: 4 (lower is better)
Translates to: TMFWITRTFVPSTNWKLGVSEEL*EIILRI
Trigger: AATCCTCAATATGATTTCCCAGAGCTCTTCAGACAC...TCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAGTTTGAAAGAAGGTTaGGAGGACAGCCAACGCTTG +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQSLKEG*EDSQRL
Trigger: CAAGCGTTGGCTGTCCTCCCAACCTTCTTTCAAACT...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACGTTCCCAGTACCAACTaGAAGTTGGGAATGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDVPSTN*KLGMRV
Trigger: CACTCTCATTCCCAACTTCCAGTTGGTACTGGGAAC...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAATCATTAAATGATCTCTaGCTAGGTAGTTTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQSLNDL*LGSFQW
Trigger: CCACTGAAAACTACCTAGCCAGAGATCATTTAATGA...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTTGGCACATTCCCTTTTaGAAACAGACTCCAACAAAC +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPWHIPF*KQTPTN
Trigger: GTTTGTTGGAGTCTGTTTCCAAAAGGGAATGTGCCA...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAATTTCTAGTTCACTCCTaGCAAAGTTCTAAGGAACTT +
Preference number: 4 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQFLVHS*QSSKEL
Trigger: AAGTTCCTTAGAACTTTGCCAGGAGTGAACTAGAAA...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTAAAATCCAACCATACTaGGATAGACAGGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: MRFTEAEAPGLLITITYFKIQPY*DRQGPS
Trigger: AGAGGGGCCCTGTCTATCCCAGTATGGTTGGATTTT...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATCTCCATGCTTAACATaGCAACACAAAACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKSPCLT*QHKTQE
Trigger: CTCTTGGGTTTTGTGTTGCCATGTTAAGCATGGAGA...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
3UTR CAA 72 bp TTTTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTaGGATCACCAGGACGTTTGTTCCCAGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: FYVLSCLSGYYV*DHQDVCSQYQL
Trigger: CAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR TCA 90 bp CCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCGCATTTTTAAAGACTGCTCTCATTTaGACACTTTCCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLQNCAYQLQHGLLCAFLKTALI*TLSQSL
Trigger: GAGGCTTTGGGAAAGTGTTCAAATGAGAGCAGTCTT...TAAAAATGCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp CAGGAGTTACTGCTATGTATCATATACACACAGCAAAATCCCTATCCCCTTCCCCCACAAGGAGCTTCATaGCATATGCATAGATCTAAA +
Preference number: 4 (lower is better)
Translates to: QELLLCIIYTQQNPYPLPPQGAS*HMHRSK
Trigger: TTTAGATCTATGCATATGTCATGAAGCTCCTTGTGG...GGGAAGGGGATAGGGATTTTGCTGTGTGTATATGATACATAGCAGTAACTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGAATACACATGCTAGTTaGCAGGCACATCTGTTAACC +
Preference number: 4 (lower is better)
Translates to: NRHCTYLKTVPGGINTERNTHAS*QAHLLT
Trigger: GGTTAACAGATGTGCCTGTCAACTAGCATGTGTATT...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGAGCAACACAGGTATCTaGTTAAAAGCCTTAAGGACA +
Preference number: 4 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPSNTGI*LKALRT
Trigger: TGTCCTTAAGGCTTTTAATCAGATACCTGTGTTGCT...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TTGTGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTAGCAACACAGGTATCTaGTTAAAAGCCTTAAGGACA +
Preference number: 4 (lower is better)
Translates to: LCSRLFVTLSSTELCLSASNTGI*LKALRT
Trigger: TGTCCTTAAGGCTTTTAATCAGATACCTGTGTTGCT...AGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCGATATGGACATACACTaGTTCATGAATGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSDMDIH*FMNGKT
Trigger: AGTCTTCCCATTCATGAATCAGTGTATGTCCATATC...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCCAGTGTGATACAACATaGAAATCTCCTAAACCATCA +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSQCDTT*KSPKPS
Trigger: TGATGGTTTAGGAGATTTTCATGTTGTATCACACTG...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGATGCAGGCTGTTGGTTaGCATGAAGTAAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQMQAVG*HEVRSL
Trigger: CAGACTTCTTACTTCATGGCAACCAACAGCCTGCAT...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261900.8
CDS-3UTR GCA 90 bp CCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCGCATTTTTATGTTCCTCGGTCATCTaGTTTTGTTTTCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLQNCAYQLQHGLLCAFLCSSVI*FCFLGS
Trigger: GCTGCCAAGAAAACAAAAGCAGATGACCGAGGAACA...TAAAAATGCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR GCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTTGTGCTTTTCTTTGTaGTCTCGGCTCTTTGTAACA +
Preference number: 4 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSLCFSL*SRLFVT
Trigger: TGTTACAAAGAGCCGAGAGCACAAAGAAAAGCACAA...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGCCCACCAGGAGTTACTaGTATGTATCATATACACAC +
Preference number: 4 (lower is better)
Translates to: NRHCTYLKTVPGGINTERPTRSY*YVSYTH
Trigger: GTGTGTATATGATACATAGCAGTAACTCCTGGTGGG...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCCCATTGGCTAGGCTTTaGTCATTCTCATGGCACCAG +
Preference number: 4 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFPLARL*SFSWHQ
Trigger: CTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATGG...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAATGGCATGAAGTAAGCTaGAATCAAATCATGAAAACA +
Preference number: 4 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQWHEVS*NQIMKT
Trigger: TGTTTTCATGATTTGATTGCAGCTTACTTCATGCCA...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAAGTTAACGTTTACTCCTaGCTACAAATTCCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQVNVYS*LQIPFY
Trigger: ATAGAAAGGAATTTGTAGGCAGGAGTAAACGTTAAC...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCGTTAACGTTTACTCCTaGCTACAAATTCCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSVNVYS*LQIPFY
Trigger: ATAGAAAGGAATTTGTAGGCAGGAGTAAACGTTAAC...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR GCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGTTCAAATATGCAAGATaGAGGGCACTAACCCACCGT +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQFKYAR*RALTHR
Trigger: ACGGTGGGTTAGTGCCCTGCATCTTGCATATTTGAA...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCAGGATTACTGTACCGTaGTTGTTTCAAACTCACATC +
Preference number: 4 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSRITVP*LFQTHI
Trigger: GATGTGAGTTTGAAACAAGCACGGTACAGTAATCCT...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCATTAAACCTGCAATaGTTGTGTCTGAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSSLNLQ*LCLKSS
Trigger: AGAGCTCTTCAGACACAACCATTGCAGGTTTAATGA...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTATTGTGACTTCACATTaGCTTCCATGTTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPIVTSH*LPCSPV
Trigger: AACTGGAGAACATGGAAGCCAATGTGAAGTCACAAT...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCTGGCTACTATGTTTTaGATCACCAGGACGTTTGTT +
Preference number: 4 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMLATMF*ITRTFV
Trigger: AACAAACGTCCTGGTGATCCAAAACATAGTAGCCAG...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGCTGGCTACTATGTTTTaGATCACCAGGACGTTTGTT +
Preference number: 4 (lower is better)
Translates to: NRHCTYLKTVPGGINTERLATMF*ITRTFV
Trigger: AACAAACGTCCTGGTGATCCAAAACATAGTAGCCAG...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACAACCTAATTAGATGGTaGAGAGGCCAAGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: MVERPRIQNVSLILHSFNNLIRW*RGQEFR
Trigger: TCTGAATTCTTGGCCTCTCCACCATCTAATTAGGTT...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGAACCTAATTAGATGGTaGAGAGGCCAAGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPNLIRW*RGQEFR
Trigger: TCTGAATTCTTGGCCTCTCCACCATCTAATTAGGTT...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACCAGATGCAGACTAAATaGCACATTCCCTTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: MVERPRIQNVSLILHSFNQMQTK*HIPFWK
Trigger: TTTCCAAAAGGGAATGTGCCATTTAGTCTGCATCTG...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCCAGATGCAGACTAAATaGCACATTCCCTTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSQMQTK*HIPFWK
Trigger: TTTCCAAAAGGGAATGTGCCATTTAGTCTGCATCTG...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATAACAATTGCCTTTACTTaGAAGCCATGTATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FLVSSSFSHMVWAFTGRITIAFT*KPCMWR
Trigger: CCTCCACATACATGGCTTCCAAGTAAAGGCAATTGT...TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACTCAGGAAGGGATTCCTaGGGATGGAGACAAGTATGT +
Preference number: 4 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANSGRDS*GWRQVC
Trigger: ACATACTTGTCTCCATCCTCAGGAATCCCTTCCTGA...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACCTGGGATTCTCATTTTaGGAGCTGTTTTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNLGFSF*ELFCQP
Trigger: AGGCTGACAAAACAGCTCTCAAAATGAGAATCCCAG...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGACACACTTAAAAGTCTaGAAAAAGTGGCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQTHLKV*KKWPEP
Trigger: AGGCTCAGGCCACTTTTTTCAGACTTTTAAGTGTGT...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTAAAACAAACTCAAATTaGACCACCTTTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPKTNSN*TTFSRA
Trigger: TGCTCTGGAAAAGGTGGTTCAATTTGAGTTTGTTTT...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAACCTATGACTTCCAAATaGAAAATAATTCGACCTCTC +
Preference number: 4 (lower is better)
Translates to: AASCRAHKELHDICIDLKPMTSK*KIIRPL
Trigger: GAGAGGTCGAATTATTTTTCATTTGGAAGTCATAGG...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CACATTCCCCATCTCTTAGAGACCTTAAGACTGCTCTCATTTGAACACTTTCCCTCAAAATCAAACCAGTaGTCATCAAGTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: HIPHLLETLRLLSFEHFPSKSNQ*SSSPQR
Trigger: TCTTTGTGGACTTGATGATCACTGGTTTGATTTTGA...GGGAAAGTGTTCAAATGAGAGCAGTCTTAAGGTCTCTAAGAGATGGGGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGGAAAGGTCTCTAAACTaGCCTATGTCAGCAATGATC +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQERSLN*PMSAMI
Trigger: GATCATTGCTGACATAGGTCAGTTTAGAGACCTTTC...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCGAGATTTACAGAAGCTaGGGCTCCAGGCCTACTTAT +
Preference number: 4 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFEIYRS*GSRPTY
Trigger: ATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTC...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGGATATGGACATACACTaGTTCATGAATGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMDMDIH*FMNGKT
Trigger: AGTCTTCCCATTCATGAATCAGTGTATGTCCATATC...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR TCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGGAAGTTGAGGCTCTCTaGTATGGACATACACTGATT +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQEVEAL*YGHTLI
Trigger: AATCAGTGTATGTCCATATCAGAGAGCCTCAACTTC...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAACTCGAACAAGTTGAGTaGACTTTACTACATGAGTAT +
Preference number: 4 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKLEQVE*TLLHEY
Trigger: ATACTCATGTAGTAAAGTGCACTCAACTTGTTCGAG...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCACACTCTTACTATTCTaGTTCTGGGAAATAAATGCA +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSTLLLF*FWEINA
Trigger: TGCATTTATTTCCCAGAAGCAGAATAGTAAGAGTGT...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TTGTGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTACCATGTCAAATACATaGCTCTTCCTTTATGTTCTC +
Preference number: 4 (lower is better)
Translates to: LCSRLFVTLSSTELCLSATMSNT*LFLYVL
Trigger: GAGAACATAAAGGAAGAGGCATGTATTTGACATGGT...AGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR GCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCACAGGTATTTGTTTTTaGCAACACGAGTCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSTGICF*QHESSK
Trigger: TTTGCTAGACTCGTGTTGGCAAAAACAAATACCTGT...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGCATATCCTAATCCATTaGTGTTTGCAACTGGAGATT +
Preference number: 4 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPHILIH*CLQLEI
Trigger: AATCTCCAGTTGCAAACAGCAATGGATTAGGATATG...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTAGTATGTGGAGGAGTATaGATTTCAATATGGAGAATT +
Preference number: 4 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLVCGGV*ISIWRI
Trigger: AATTCTCCATATTGAAATGCATACTCCTCCACATAC...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCCACCATTTGATGAGTTaGATAGACTGCTTAAATTCT +
Preference number: 4 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSHHLMS*IDCLNS
Trigger: AGAATTTAAGCAGTCTATGCAACTCATCAAATGGTG...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTACACCATTTGATGAGTTaGATAGACTGCTTAAATTCT +
Preference number: 4 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLHHLMS*IDCLNS
Trigger: AGAATTTAAGCAGTCTATGCAACTCATCAAATGGTG...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACAAGCATCCCTCTCCATaGTTAACATGGCAACACAAA +
Preference number: 4 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDKHPSP*LTWQHK
Trigger: TTTGTGTTGCCATGTTAAGCATGGAGAGGGATGCTT...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTGTCAGTTCTGTTGGTTaGCATGAAGTAAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: MRFTEAEAPGLLITITYFVSSVG*HEVRSL
Trigger: CAGACTTCTTACTTCATGGCAACCAACAGAACTGAC...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CCA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACAGAAAGTTCTTTATCTaGGTCCACGCCAAAACGACG +
Preference number: 4 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNRKFFI*VHAKTT
Trigger: CGTCGTTTTGGCGTGGACCCAGATAAAGAACTTTCT...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTTGGATCACCAGGACGTTTGGTGTCTGAAGAGCTCTaGGAAATCATATTGAGGATT +
Preference number: 4 (lower is better)
Translates to: LCAKLLVWLLCFGSPGRLVSEEL*EIILRI
Trigger: AATCCTCAATATGATTTCCCAGAGCTCTTCAGACAC...CAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCCACTGGTTAAGTTGCTaGATGACTCTTCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFHWLSC*MTLRRL
Trigger: CAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTG...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACGCAACATCTCCACACTaGTTAAGTTGCTGGATGACT +
Preference number: 4 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNATSPH*LSCWMT
Trigger: AGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGC...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGATGATGATGATTAGATaGGTGAGTCTTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPMMMIR*VSLVLF
Trigger: GAAAAGCACAAGACTCACCCATCTAATCATCATCAT...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTGTGCTCTCGGCTCTTTGTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTATGATGATGATTAGATaGGTGAGTCTTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LCSRLFVTLSSTELCLSAMMMIR*VSLVLF
Trigger: GAAAAGCACAAGACTCACCCATCTAATCATCATCAT...AGCTGATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCCTAGCTTCTCCCATATaGTTTGGGCTTTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFLASPI*FGLSQA
Trigger: TGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAG...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATACACAATAGTATCCATTaGCTAGGCTTTGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: FLVSSSFSHMVWAFTGRIHNSIH*LGFAHS
Trigger: AGAATGAGCAAAGCCTAGCCAATGGATACTATTGTG...TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTTCACTCCTAATATCTaGGATAATCAAGCCTCCATA +
Preference number: 4 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSFTPNI*DNQASI
Trigger: TATGGAGGCTTGATTATCCCAGATATTAGGAGTGAA...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGTGGAAGCCATGTATGTaGAGGAGTATGCATTTCAAT +
Preference number: 4 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMWKPCM*RSMHFN
Trigger: ATTGAAATGCATACTCCTCCACATACATGGCTTCCA...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CCA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACCACTCAGTTAAAAGCTaGGTGTTAACAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDHSVKS*VLTSSN
Trigger: GTTGCTGCTTGTTAACACCCAGCTTTTAACTGAGTG...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGTCATTTCTCACCCTTTaGAGGTACAAGGATAGGAAA +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQSFLTL*RYKDRK
Trigger: TTTCCTATCCTTGTACCTTCAAAGGGTGAGAAATGA...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTAACTCAAAAGCATAACTaGTACTTCAGAAGACCGATT +
Preference number: 4 (lower is better)
Translates to: HCTYLKTVPGGINTERSLTQKHN*YFRRPI
Trigger: AATCGGTCTTCTGAAGTATCAGTTATGCTTTTGAGT...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp TTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTTGGATCACCAGGACGTTTGACTCAAAAGCATAACTaGTACTTCAGAAGACCGATT +
Preference number: 4 (lower is better)
Translates to: LCAKLLVWLLCFGSPGRLTQKHN*YFRRPI
Trigger: AATCGGTCTTCTGAAGTATCAGTTATGCTTTTGAGT...CAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR GCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGATGGAGACAAGTATGTaGTACCTTGATGACATGTTC +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQMETSM*YLDDMF
Trigger: GAACATGTCATCAAGGTAGCACATACTTGTCTCCAT...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAAACACTCTTACTATTCTaGTTCTGGGAAATAAATGCA +
Preference number: 4 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKTLLLF*FWEINA
Trigger: TGCATTTATTTCCCAGAAGCAGAATAGTAAGAGTGT...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATATTTTATGTGCTAAGTTaGTTGTCTGGCTACTATGTT +
Preference number: 4 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIFYVLS*LSGYYV
Trigger: AACATAGTAGCCAGACAAGCAACTTAGCACATAAAA...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGACAGGTATTTGTTTTTaGCAACACGAGTCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: NRHCTYLKTVPGGINTERTGICF*QHESSK
Trigger: TTTGCTAGACTCGTGTTGGCAAAAACAAATACCTGT...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACACCGATTTGGATCGATaGTTCACTACAGTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNTDLDR*FTTVQL
Trigger: TAGCTGAACTGTAGTGAAGCATCGATCCAAATCGGT...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGGTGTCTGAAGAGCTCTaGGAAATCATATTGAGGATT +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQVSEEL*EIILRI
Trigger: AATCCTCAATATGATTTCCCAGAGCTCTTCAGACAC...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp ATCATATTGAGGATTGTCTGCTCTGAAGTCTTTTCATCTGTTCCTCGGTCATCTATTGTGACTTCACATTaGCTTCCATGTTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: IILRIVCSEVFSSVPRSSIVTSH*LPCSPV
Trigger: AACTGGAGAACATGGAAGCCAATGTGAAGTCACAAT...AGATGACCGAGGAACAGATGAAAAGACTTCAGAGCAGACAATCCTCAATATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGATCAACCTAATTAGATaGTGGAGAGGCCAAGAATTC +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQINLIR*WRGQEF
Trigger: GAATTCTTGGCCTCTCCACCATCTAATTAGGTTGAT...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTATTCACTCCTAATATCTaGGATAATCAAGCCTCCATA +
Preference number: 4 (lower is better)
Translates to: HCTYLKTVPGGINTERSLFTPNI*DNQASI
Trigger: TATGGAGGCTTGATTATCCCAGATATTAGGAGTGAA...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp TTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATCATTAAATGATCTCTaGCTAGGTAGTTTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FLVSSSFSHMVWAFTGRISLNDL*LGSFQW
Trigger: CCACTGAAAACTACCTAGCCAGAGATCATTTAATGA...TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGTGGAAGCCATGTATGTaGAGGAGTATGCATTTCAAT +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQWKPCM*RSMHFN
Trigger: ATTGAAATGCATACTCCTCCACATACATGGCTTCCA...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACTTATCCAGTTTCGAATaGGGGACACGAGTTTTACAG +
Preference number: 4 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANLSSFE*GTRVLQ
Trigger: CTGTAAAACTCGTGTCCCTCATTCGAAACTGGATAA...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACATGGAGACAAGTATGTaGTACCTTGATGACATGTTC +
Preference number: 4 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNMETSM*YLDDMF
Trigger: GAACATGTCATCAAGGTAGCACATACTTGTCTCCAT...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTAGTATGTGGAGGAGTATaGATTTCAATATGGAGAATT +
Preference number: 4 (lower is better)
Translates to: HCTYLKTVPGGINTERSLVCGGV*ISIWRI
Trigger: AATTCTCCATATTGAAATGCATACTCCTCCACATAC...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACTCCATTTTTCAGCTCTaGCAAGAAGAGGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNSIFQL*QEEGRY
Trigger: ATATCTTCCCTCTTCTTGCCAGAGCTGAAAAATGGA...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACCACAATAGTATCCATTaGCTAGGCTTTGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNHNSIH*LGFAHS
Trigger: AGAATGAGCAAAGCCTAGCCAATGGATACTATTGTG...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTTTTCTAGTTCACTCCTaGCAAAGTTCTAAGGAACTT +
Preference number: 4 (lower is better)
Translates to: MRFTEAEAPGLLITITYFFLVHS*QSSKEL
Trigger: AAGTTCCTTAGAACTTTGCCAGGAGTGAACTAGAAA...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACAGGACATACTTGCTCTaGCTTCAATTAGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANRTYLL*LQLACC
Trigger: ACAGCATGCTAATTGAAGCCAGAGCAAGTATGTCCT...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACAAAACAAACTCAAATTaGACCACCTTTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNKTNSN*TTFSRA
Trigger: TGCTCTGGAAAAGGTGGTTCAATTTGAGTTTGTTTT...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCCCACAAGGAGCTTCATaGCATATGCATAGATCTAAA +
Preference number: 4 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFPQGAS*HMHRSK
Trigger: TTTAGATCTATGCATATGTCATGAAGCTCCTTGTGG...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACTCATTTCTCACCCTTTaGAGGTACAAGGATAGGAAA +
Preference number: 4 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANSFLTL*RYKDRK
Trigger: TTTCCTATCCTTGTACCTTCAAAGGGTGAGAAATGA...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGATATTGAGGATTGTCTaGTCTGAAGTCTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: LKTDTVRILRQYQEALTQILRIV*SEVFSS
Trigger: AGATGAAAAGACTTCAGAGCAGACAATCCTCAATAT...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACTCATTAAACCTGCAATaGTTGTGTCTGAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANSLNLQ*LCLKSS
Trigger: AGAGCTCTTCAGACACAACCATTGCAGGTTTAATGA...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCATCAACCTAATTAGATaGTGGAGAGGCCAAGAATTC +
Preference number: 4 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFINLIR*WRGQEF
Trigger: GAATTCTTGGCCTCTCCACCATCTAATTAGGTTGAT...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCCCTATGACTTCCAAATaGAAAATAATTCGACCTCTC +
Preference number: 4 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFPMTSK*KIIRPL
Trigger: GAGAGGTCGAATTATTTTTCATTTGGAAGTCATAGG...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR TCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACGCAGTGATGTCACCATaGTTTTATTTCCATATCCTA +
Preference number: 4 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANAVMSP*FYFHIL
Trigger: TAGGATATGGAAATAAAATCATGGTGACATCACTGC...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCATATTGAGGATTGTCTaGTCTGAAGTCTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFILRIV*SEVFSS
Trigger: AGATGAAAAGACTTCAGAGCAGACAATCCTCAATAT...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR GCA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACTGGCATGAAGTAAGCTaGAATCAAATCATGAAAACA +
Preference number: 4 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANWHEVS*NQIMKT
Trigger: TGTTTTCATGATTTGATTGCAGCTTACTTCATGCCA...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS GCA 90 bp CTCTCTCCCTCCATAGTGCTTCAACCAGAAGGCAGCGGCGAAGGCTaGAGGCACTTCCCAGCGTCACCTAAGAGGCGACCCACATCCGCT +
Preference number: 5 (lower is better)
Translates to: LSPSIVLQPEGSGEG*RHFPASPKRRPTSA
Trigger: AGCGGATGTGGGTCGCCTCTTAGGTGACGCTGGGAAGTGCCTGCAGCCTTCGCCGCTGCCTTCTGGTTGAAGCACTATGGAGGGAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CAA 90 bp TGTTCTCCAGTTGCCTCTTCTGGGCAGCCAATTCTTCTGCATGCTTCGCGCGGTGGTGGTGGCCGGGGTTaGTCTGTATTGCCAGATCTC +
Preference number: 5 (lower is better)
Translates to: CSPVASSGQPILLHASRGGGGRG*SVLPDL
Trigger: GAGATCTGGCAATACAGACAAACCCCGGCCACCACC...ACCGCGCGAAGCATGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS CCA 90 bp AACCTTGAGGCGAGGACGCAGGCGCGTCACGTGACCGTTGGGCGGTaGAGTGGGGTTAGAAGTTCTTTCTTAAAAACCGTGTATCTTCCC +
Preference number: 5 (lower is better)
Translates to: NLEARTQARHVTVGR*SGVRSSFLKTVYLP
Trigger: GGGAAGATACACGGTTTTTAAGAAAGAACTTCTAACCCCACTCCACCGCCCAACGGTCACGTGACGCGCCTGCGTCCTCGCCTCAAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CAA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCTCTGCTTTTGTTTTCTaGGCAGCCTCGCATGCCCTC +
Preference number: 5 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSSAFVF*AASHAL
Trigger: GAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAGA...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCCTCGGTCATCTGCTTTaGTTTTCTTGGCAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSLGHLL*FSWQPR
Trigger: GCGAGGCTGCCAAGAAAACAAAAGCAGATGACCGAG...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAGGGCAGAAGCTGGCCTaGCTCGCCAACCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTAGQKLA*LANPPS
Trigger: GGAAGGAGGGTTGGCGAGCAAGGCCAGCTTCTGCCC...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTGAGGACAGCCAACGCTaGCCCGGCAACATCTCCACA +
Preference number: 5 (lower is better)
Translates to: DHQDVCSQYQLEVGNESAEDSQR*PGNIST
Trigger: TGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTC...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TTGAAAGAAGGTTGGGAGGACAGCCAACGCTTGCCCGGCAACATCTCCACACTGTTCCATGTTCTCCAGTaGCCTCTTCTGGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LKEGWEDSQRLPGNISTLFHVLQ*PLLGSQ
Trigger: TTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGAA...CAGTGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTCCCAACCTTCTTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTAGGGCAGAAGCTGGCCTaGCTCGCCAACCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLGQKLA*LANPPS
Trigger: GGAAGGAGGGTTGGCGAGCAAGGCCAGCTTCTGCCC...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS GCA 90 bp CGACTTGACGAACTTCCGCTAAGCGTCGACCGCCGGGTTGTTACTTaGCTCCGTAGAGGAAGCAAAAGTCAAAGGACCTACTTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: RLDELPLSVDRRVVT*LRRGSKSQRTYFRN
Trigger: ATTCCGGAAGTAGGTCCTTTGACTTTTGCTTCCTCTACGGAGGCAAGTAACAACCCGGCGGTCGACGCTTAGCGGAAGTTCGTCAAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CAA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGTACCACCGTTTGTTGTaGTTCTTCCTCTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: GSCCDHWPQWALYPVSNEYHRLL*FFLSPS
Trigger: GGAGGGAGAGAGGAAGAACAACAACAAACGGTGGTA...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTGGATCACCAGGACGTTaGTTCCCAGTACCAACTGGA +
Preference number: 5 (lower is better)
Translates to: LAASHALQFQMRLSLLGVGSPGR*FPVPTG
Trigger: TCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCC...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TGTTCTCCAGTTGCCTCTTCTGGGCAGCCAATTCTTCTGCATGCTTCGCGCGGTAAAAGGAAAGGCCACTaGTGTCTGAGCTATGCCCAG +
Preference number: 5 (lower is better)
Translates to: CSPVASSGQPILLHASRGKRKGH*CLSYAQ
Trigger: CTGGGCATAGCTCAGACACAAGTGGCCTTTCCTTTT...ACCGCGCGAAGCATGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCAAATACCACCGTTTGTaGTTGTTCTTCCTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSKYHRL*LFFLSP
Trigger: GGGAGAGAGGAAGAACAACAACAAACGGTGGTATTT...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TGGCAGAGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCGCTTGCTCGAACAAGTaGAGTGCACTTTACTACATG +
Preference number: 5 (lower is better)
Translates to: WQRWWPGFVCIARSRGDSACSNK*SALYYM
Trigger: CATGTAGTAAAGTGCACTCAACTTGTTCGAGCAAGC...GGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATAGCGTCGACCGCCGGGTaGTTACTTGCCTCCGTAGAG +
Preference number: 5 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIASTAG*LLASVE
Trigger: CTCTACGGAGGCAAGTAACAACCCGGCGGTCGACGC...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CAA 90 bp TGTTCTCCAGTTGCCTCTTCTGGGCAGCCAATTCTTCTGCATGCTTCGCGCGGTCAATTCCAAATGCGTTaGAGCCTGTTGGGAGTTTTC +
Preference number: 5 (lower is better)
Translates to: CSPVASSGQPILLHASRGQFQMR*SLLGVF
Trigger: GAAAACTCCCAACAGGCTCAAACGCATTTGGAATTG...ACCGCGCGAAGCATGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp CTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTTTAAACCTGCAATGGTaGTGTCTGAAGAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LVKLLDDSSETGREGTALLNLQW*CLKSSG
Trigger: CCCAGAGCTCTTCAGACACAACCATTGCAGGTTTAA...AAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp CAGGAGTTACTGCTATGTATCATATACACACAGCAAAATCCCTATCCCCTTCCCGAGGACAGCCAACGCTaGCCCGGCAACATCTCCACA +
Preference number: 5 (lower is better)
Translates to: QELLLCIIYTQQNPYPLPEDSQR*PGNIST
Trigger: TGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTC...GGGAAGGGGATAGGGATTTTGCTGTGTGTATATGATACATAGCAGTAACTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTCTGTCCTCTACAGAATaGTGCTTATCAGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LVKLLDDSSETGREGTALLSSTE*CLSAAA
Trigger: TGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAG...AAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTCTGTCCTCTACAGAATaGTGCTTATCAGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LAASHALQFQMRLSLLGVLSSTE*CLSAAA
Trigger: TGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAG...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp GGCAACATCTCCACACTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGAGTACCAACTGGAAGTaGGGAATGAGAGTGCTTGTG +
Preference number: 5 (lower is better)
Translates to: GNISTLVKLLDDSSETGRSTNWK*GMRVLV
Trigger: CACAAGCACTCTCATTCCCAACTTCCAGTTGGTACT...CCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGAGATGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp AGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCACCAGAACATGTTCCAATTTTTaGGGCTGCTCCTCCACTTTA +
Preference number: 5 (lower is better)
Translates to: RWWPGFVCIARSRGDSTRTCSNF*GCSSTL
Trigger: TAAAGTGGAGGAGCAGCCCAAAAAATTGGAACATGT...TCTGGTGGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCCTCGGTCATCTGCTTTaGTTTTCTTGGCAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSLGHLL*FSWQPR
Trigger: GCGAGGCTGCCAAGAAAACAAAAGCAGATGACCGAG...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATAGAGGACAGCCAACGCTaGCCCGGCAACATCTCCACA +
Preference number: 5 (lower is better)
Translates to: FLVSSSFSHMVWAFTGRIEDSQR*PGNIST
Trigger: TGTGGAGATGTTGCCGGGCAAGCGTTGGCTGTCCTC...TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GGGTCGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGTATTGTGACTTCACATaGGCTTCCATGTTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: GSCCDHWPQWALYPVSNEYCDFT*ASMFSS
Trigger: ACTGGAGAACATGGAAGCCAATGTGAAGTCACAATA...CTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTGTCTTGATAGTCTATaGTCTGGGTCGTGTTGTGAC +
Preference number: 5 (lower is better)
Translates to: LAASHALQFQMRLSLLGVCLDSL*SGSCCD
Trigger: GTCACAACACGACCCAGACAATAGACTATCAAGACA...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp CAGGAGTTACTGCTATGTATCATATACACACAGCAAAATCCCTATCCCCTTCCCGGTGGTGGCCGGGGTTaGTCTGTATTGCCAGATCTC +
Preference number: 5 (lower is better)
Translates to: QELLLCIIYTQQNPYPLPGGGRG*SVLPDL
Trigger: GAGATCTGGCAATACAGACAAACCCCGGCCACCACC...GGGAAGGGGATAGGGATTTTGCTGTGTGTATATGATACATAGCAGTAACTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGGACCGAAAGGATCCACAATaGTCTGATACAAGAAACCCT +
Preference number: 5 (lower is better)
Translates to: RVVTIGPSGPFIQFRMRDRKDPQ*SDTRNP
Trigger: AGGGTTTCTTGTATCAGACAATTGTGGATCCTTTCG...GTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CAA 90 bp CTGGTTAAGTTGCTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGTGAAATACCACCGTTaGTTGTTGTTCTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LVKLLDDSSETGREGTALVKYHR*LLFFLS
Trigger: AGAGAGGAAGAACAACAACAAACGGTGGTATTTCAC...AAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCTCTGCTTTTGTTTTCTaGGCAGCCTCGCATGCCCTC +
Preference number: 5 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSSAFVF*AASHAL
Trigger: GAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAGA...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCAGTACCAACTGGAAGTaGGGAATGAGAGTGCTTGTG +
Preference number: 5 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSSTNWK*GMRVLV
Trigger: CACAAGCACTCTCATTCCCAACTTCCAGTTGGTACT...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp AGGTGGTGGCCGGGGTTTGTCTGTATTGCCAGATCTCGAGGAGATTCCACCAGATATGTGCTAAGTTGCTaGTCTGGCTACTATGTTTTG +
Preference number: 5 (lower is better)
Translates to: RWWPGFVCIARSRGDSTRYVLSC*SGYYVL
Trigger: CAAAACATAGTAGCCAGACAAGCAACTTAGCACATA...TCTGGTGGAATCTCCTCGAGATCTGGCAATACAGACAAACCCCGGCCACCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TGTTCTCCAGTTGCCTCTTCTGGGCAGCCAATTCTTCTGCATGCTTCGCGCGGTCATATTCACAGTGTCTaGATAGTCTATTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: CSPVASSGQPILLHASRGHIHSV*IVYCLG
Trigger: ACCCAGACAATAGACTATCAAGACACTGTGAATATG...ACCGCGCGAAGCATGCAGAAGAATTGGCTGCCCAGAAGAGGCAACTGGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCCGGGGTTTGTCTGTATaGCCAGATCTCGAGGAGATT +
Preference number: 5 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSRGLSV*PDLEEI
Trigger: AATCTCCTCGAGATCTGGCAATACAGACAAACCCCG...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCTTAAGAGTCAGGGTGTaGGCTGTACTTGCCCAAACT +
Preference number: 5 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSLRVRV*AVLAQT
Trigger: AGTTTGGGCAAGTACAGCCAACACCCTGACTCTTAA...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CGTGTTGTGACCATTGGCCCCAGTGGGCCCTTTATCCAGTTTCGAATGAGGGACTATGTGGGTGATCAATaGTTAGTTCAAAGCCTAAAG +
Preference number: 5 (lower is better)
Translates to: RVVTIGPSGPFIQFRMRDYVGDQ*LVQSLK
Trigger: CTTTAGGCTTTGAACTAACAATTGATCACCCACATA...GTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCCTCGGTCATCTGCTTTaGTTTTCTTGGCAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSLGHLL*FSWQPR
Trigger: GCGAGGCTGCCAAGAAAACAAAAGCAGATGACCGAG...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGATCCACACTGGTTAAGTaGCTGGATGACTCTTCGGAG +
Preference number: 5 (lower is better)
Translates to: TMFWITRTFVPSTNWKLGSTLVK*LDDSSE
Trigger: CTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGA...TCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TGCAGGGCACTAACCCACCGTCAGTTAACGTTTACTCCTGCCTACAAATTCCTTAGTACCAACTGGAAGTaGGGAATGAGAGTGCTTGTG +
Preference number: 5 (lower is better)
Translates to: CRALTHRQLTFTPAYKFLSTNWK*GMRVLV
Trigger: CACAAGCACTCTCATTCCCAACTTCCAGTTGGTACT...AAGGAATTTGTAGGCAGGAGTAAACGTTAACTGACGGTGGGTTAGTGCCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATAGGATCACCAGGACGTTaGTTCCCAGTACCAACTGGA +
Preference number: 5 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIGSPGR*FPVPTG
Trigger: TCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCC...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TTGGCAGCCTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTATGTGCTAAGTTGCTaGTCTGGCTACTATGTTTTG +
Preference number: 5 (lower is better)
Translates to: LAASHALQFQMRLSLLGVYVLSC*SGYYVL
Trigger: CAAAACATAGTAGCCAGACAAGCAACTTAGCACATA...AACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAGGCTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp CTGGATGACTCTTCGGAGACTGGCAGGGAAGGCACTGCACTTGTGGTAGAAGTTCATATTCACAGTGTCTaGATAGTCTATTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LDDSSETGREGTALVVEVHIHSV*IVYCLG
Trigger: ACCCAGACAATAGACTATCAAGACACTGTGAATATG...AACTTCTACCACAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTACCACCGTTTGTTGTaGTTCTTCCTCTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSYHRLL*FFLSPS
Trigger: GGAGGGAGAGAGGAAGAACAACAACAAACGGTGGTA...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTTACCACCGTTTGTTGTaGTTCTTCCTCTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPYHRLL*FFLSPS
Trigger: GGAGGGAGAGAGGAAGAACAACAACAAACGGTGGTA...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTTCTCCAACTCTGGGAAATCATATaGAGGATTGTCTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LACPPIPNAFEPVGSFLQLWEII*RIVCSE
Trigger: TTCAGAGCAGACAATCCTCAATATGATTTCCCAGAG...TTGGAGAAAACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTTCCATGTTCTCCAGTaGCCTCTTCTGGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: NRHCTYLKTVPGGINTERFHVLQ*PLLGSQ
Trigger: TTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGAA...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTCCCTGTCCTCTACAGAATaGTGCTTATCAGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: WLGFAHSHGTSTVKFTSSLSSTE*CLSAAA
Trigger: TGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAG...GGAGCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CAGGAGTTACTGCTATGTATCATATACACACAGCAAAATCCCTATCCCCTTCCCAAAAGGAAAGGCCACTaGTGTCTGAGCTATGCCCAG +
Preference number: 5 (lower is better)
Translates to: QELLLCIIYTQQNPYPLPKRKGH*CLSYAQ
Trigger: CTGGGCATAGCTCAGACACAAGTGGCCTTTCCTTTT...GGGAAGGGGATAGGGATTTTGCTGTGTGTATATGATACATAGCAGTAACTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAACGGGGTTTGTCTGTATaGCCAGATCTCGAGGAGATT +
Preference number: 5 (lower is better)
Translates to: AASCRAHKELHDICIDLKRGLSV*PDLEEI
Trigger: AATCTCCTCGAGATCTGGCAATACAGACAAACCCCG...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTGCTATTTCTCACCATTaGATGAGTTGCATAGACTGC +
Preference number: 5 (lower is better)
Translates to: DHQDVCSQYQLEVGNESAAISHH*MSCIDC
Trigger: GCAGTCTATGCAACTCATCAAATGGTGAGAAATAGC...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CAA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGGTGAAATACCACCGTTaGTTGTTGTTCTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKVKYHR*LLFFLS
Trigger: AGAGAGGAAGAACAACAACAAACGGTGGTATTTCAC...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCACATGTTCCAATTTTTaGGGCTGCTCCTCCACTTTA +
Preference number: 5 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSTCSNF*GCSSTL
Trigger: TAAAGTGGAGGAGCAGCCCAAAAAATTGGAACATGT...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTCAGATCTTGAACTTGTaGCAAATAAGCCTCACTTCT +
Preference number: 5 (lower is better)
Translates to: DHQDVCSQYQLEVGNESAQILNL*QISLTS
Trigger: AGAAGTGAGGCTTATTTGCAACAAGTTCAAGATCTG...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTTTAAACCTGCAATGGTaGTGTCTGAAGAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPLNLQW*CLKSSG
Trigger: CCCAGAGCTCTTCAGACACAACCATTGCAGGTTTAA...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACTTCCATGTTCTCCAGTaGCCTCTTCTGGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDFHVLQ*PLLGSQ
Trigger: TTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGAA...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp AGAGGATTTAGTACTCTTGGCAATCTTGGCTGGATGATCAAACACAGCCCCTCCTTATCTCCTCTGGTTTaGAAGACGCAGCTTTATCTC +
Preference number: 5 (lower is better)
Translates to: RGFSTLGNLGWMIKHSPSLSPLV*KTQLYL
Trigger: GAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATAA...GGAGGGGCTGTGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGCTTCTCCCATATGGTTaGGGCTTTCACAGGCAGGAT +
Preference number: 5 (lower is better)
Translates to: NRHCTYLKTVPGGINTERLLPYG*GFHRQD
Trigger: ATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAG...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ACCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAACAATCCACAGGTATTaGTTTTTGCCAACACGAGTC +
Preference number: 5 (lower is better)
Translates to: TLQSHPPGVTAMYHIHTATIHRY*FLPTRV
Trigger: GACTCGTGTTGGCAAAAACAAATACCTGTGGATTGT...TGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CCCTCCAATCCCACCCACCAGGAGTTACTGCTATGTATCATATACACACAGCAAATTACTGTACCGTGCTaGTTTCAAACTCACATCCAC +
Preference number: 5 (lower is better)
Translates to: PSNPTHQELLLCIIYTQQITVPC*FQTHIH
Trigger: GTGGATGTGAGTTTGAAACAAGCACGGTACAGTAAT...TTGCTGTGTGTATATGATACATAGCAGTAACTCCTGGTGGGTGGGATTGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTGGGAATGAGAGTGCTAATCTCACCACAAAATaGTACCTGAGTGACAGATTG +
Preference number: 5 (lower is better)
Translates to: DHQDVCSQYQLEVGNESANLTTK*YLSDRL
Trigger: CAATCTGTCACTCAGGTACAATTTTGTGGTGAGATT...AGCACTCTCATTCCCAACTTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CAA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATAAAATACCACCGTTTGTaGTTGTTCTTCCTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIKYHRL*LFFLSP
Trigger: GGGAGAGAGGAAGAACAACAACAAACGGTGGTATTT...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTAGTGAAATACCACCGTTaGTTGTTGTTCTTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLVKYHR*LLFFLS
Trigger: AGAGAGGAAGAACAACAACAAACGGTGGTATTTCAC...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGGACTACACGGCACAAAGCTATACTATAGCAGTGTaGATAGTCAATTGTGAGACG +
Preference number: 5 (lower is better)
Translates to: TYVSNDLLVQRPDYTAQSYTIAV*IVNCET
Trigger: CGTCTCACAATTGACTATCAACACTGCTATAGTATA...GCTTTGTGCCGTGTAGTCCGGCCTTTGCACTAGTAGATCATTGCTGACATAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CTCGCATGCCCTCCAATTCCAAATGCGTTTGAGCCTGTTGGGAGTTTTCTCCAACAAGTATGTGCTACCTaGATGACATGTTCCAATTTT +
Preference number: 5 (lower is better)
Translates to: LACPPIPNAFEPVGSFLQQVCAT*MTCSNF
Trigger: AAAATTGGAACATGTCATCAAGGTAGCACATACTTG...TTGGAGAAAACTCCCAACAGGCTCAAACGCATTTGGAATTGGAGGGCATGCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCGCTTGCTCGAACAAGTaGAGTGCACTTTACTACATG +
Preference number: 5 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSACSNK*SALYYM
Trigger: CATGTAGTAAAGTGCACTCAACTTGTTCGAGCAAGC...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACATGCGTTTGAGCCTGTaGGGAGTTTTCTCCAAAATC +
Preference number: 5 (lower is better)
Translates to: MVERPRIQNVSLILHSFNMRLSL*GVFSKI
Trigger: GATTTTGGAGAAAACTCCCAACAGGCTCAAACGCAT...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTTCCACACTGGTTAAGTaGCTGGATGACTCTTCGGAG +
Preference number: 5 (lower is better)
Translates to: MRFTEAEAPGLLITITYFSTLVK*LDDSSE
Trigger: CTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGA...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATATCTGGCTACTATGTTTaGGATCACCAGGACGTTTGT +
Preference number: 5 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYISGYYV*DHQDVC
Trigger: ACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGA...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACAAAAGGAAAGGCCACTaGTGTCTGAGCTATGCCCAG +
Preference number: 5 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDKRKGH*CLSYAQ
Trigger: CTGGGCATAGCTCAGACACAAGTGGCCTTTCCTTTT...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAATGTCTTGATAGTCTATaGTCTGGGTCGTGTTGTGAC +
Preference number: 5 (lower is better)
Translates to: AASCRAHKELHDICIDLKCLDSL*SGSCCD
Trigger: GTCACAACACGACCCAGACAATAGACTATCAAGACA...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCGGGTGTTGGCTGTACTaGCCCAAACTACAAATTAGA +
Preference number: 5 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSGCWLY*PKLQIR
Trigger: TCTAATTTGTAGTTTGGGCAAGTACAGCCAACACCC...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp AGAAAGGTCTCTAAACTGACCTATGTCAGCAATGATCTACTAGTGCAAAGGCCGCTTCAGAAGACCGATTaGGATCGATGCTTCACTACA +
Preference number: 5 (lower is better)
Translates to: RKVSKLTYVSNDLLVQRPLQKTD*DRCFTT
Trigger: TGTAGTGAAGCATCGATCCAAATCGGTCTTCTGAAG...CGGCCTTTGCACTAGTAGATCATTGCTGACATAGGTCAGTTTAGAGACCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TGCCAGATCTCGAGGAGATTCCACCAGACCGAGGATTCAGATAGTCACTATAAGTATGTGGGTGATCAATaGTTAGTTCAAAGCCTAAAG +
Preference number: 5 (lower is better)
Translates to: CQISRRFHQTEDSDSHYKYVGDQ*LVQSLK
Trigger: CTTTAGGCTTTGAACTAACAATTGATCACCCACATA...CTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCGAGATCTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTTGGATCACCAGGACGTTTGGCTTGCTCGAACAAGTaGAGTGCACTTTACTACATG +
Preference number: 5 (lower is better)
Translates to: LCAKLLVWLLCFGSPGRLACSNK*SALYYM
Trigger: CATGTAGTAAAGTGCACTCAACTTGTTCGAGCAAGC...CAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTTGGATCACCAGGACGTTTGATGCGTTTGAGCCTGTaGGGAGTTTTCTCCAAAATC +
Preference number: 5 (lower is better)
Translates to: LCAKLLVWLLCFGSPGRLMRLSL*GVFSKI
Trigger: GATTTTGGAGAAAACTCCCAACAGGCTCAAACGCAT...CAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCAATTCCAAATGCGTTaGAGCCTGTTGGGAGTTTTC +
Preference number: 5 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMQFQMR*SLLGVF
Trigger: GAAAACTCCCAACAGGCTCAAACGCATTTGGAATTG...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp GCAGCTTCATGCAGAGCCCACAAGGAGCTTCATGACATATGCATAGATCTAAAACTCTGGGAAATCATATaGAGGATTGTCTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: AASCRAHKELHDICIDLKLWEII*RIVCSE
Trigger: TTCAGAGCAGACAATCCTCAATATGATTTCCCAGAG...TTTTAGATCTATGCATATGTCATGAAGCTCCTTGTGGGCTCTGCATGAAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GGAACCTCGGAGGGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATATTGTGACTTCACATaGGCTTCCATGTTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: GTSEGYFSPFDELHRLLKYCDFT*ASMFSS
Trigger: ACTGGAGAACATGGAAGCCAATGTGAAGTCACAATA...TTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCCCTCCGAGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CATTGGCTAGGCTTTGCTCATTCTCATGGCACCAGTACTGTTAAATTCACAAGCTTATCTCCTCTGGTTTaGAAGACGCAGCTTTATCTC +
Preference number: 5 (lower is better)
Translates to: HWLGFAHSHGTSTVKFTSLSPLV*KTQLYL
Trigger: GAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATAA...GCTTGTGAATTTAACAGTACTGGTGCCATGAGAATGAGCAAAGCCTAGCCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTGGCTACTATGTTTaGGATCACCAGGACGTTTGT +
Preference number: 5 (lower is better)
Translates to: NRHCTYLKTVPGGINTERSGYYV*DHQDVC
Trigger: ACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGA...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TCTGGCTACTATGTTTTGGATCACCAGGACGTTTGTTCCCAGTACCAACTGGAAGTTTTATGTGCTAAGTaGCTTGTCTGGCTACTATGT +
Preference number: 5 (lower is better)
Translates to: SGYYVLDHQDVCSQYQLEVLCAK*LVWLLC
Trigger: ACATAGTAGCCAGACAAGCAACTTAGCACATAAAAC...TTCCAGTTGGTACTGGGAACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACCGGGGTTTGTCTGTATaGCCAGATCTCGAGGAGATT +
Preference number: 5 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNRGLSV*PDLEEI
Trigger: AATCTCCTCGAGATCTGGCAATACAGACAAACCCCG...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTAGGGTGTTGGCTGTACTaGCCCAAACTACAAATTAGA +
Preference number: 5 (lower is better)
Translates to: HCTYLKTVPGGINTERSLGCWLY*PKLQIR
Trigger: TCTAATTTGTAGTTTGGGCAAGTACAGCCAACACCC...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGTTAAGAGTCAGGGTGTaGGCTGTACTTGCCCAAACT +
Preference number: 5 (lower is better)
Translates to: LKTDTVRILRQYQEALTQLRVRV*AVLAQT
Trigger: AGTTTGGGCAAGTACAGCCAACACCCTGACTCTTAA...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACCCATATCCTAATCCATaGCTGTTTGCAACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: MVERPRIQNVSLILHSFNPYPNP*LFATGD
Trigger: ATCTCCAGTTGCAAACAGCAATGGATTAGGATATGG...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTCCATATCCTAATCCATaGCTGTTTGCAACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPPYPNP*LFATGD
Trigger: ATCTCCAGTTGCAAACAGCAATGGATTAGGATATGG...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ATGGTGGAGAGGCCAAGAATTCAGAATGTGTCCTTAATCCTTCACAGCTTCAACGCTATTTCTCACCATTaGATGAGTTGCATAGACTGC +
Preference number: 5 (lower is better)
Translates to: MVERPRIQNVSLILHSFNAISHH*MSCIDC
Trigger: GCAGTCTATGCAACTCATCAAATGGTGAGAAATAGC...GTTGAAGCTGTGAAGGATTAAGGACACATTCTGAATTCTTGGCCTCTCCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGATGCGTTTGAGCCTGTaGGGAGTTTTCTCCAAAATC +
Preference number: 5 (lower is better)
Translates to: LKTDTVRILRQYQEALTQMRLSL*GVFSKI
Trigger: GATTTTGGAGAAAACTCCCAACAGGCTCAAACGCAT...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTCAATTCCAAATGCGTTaGAGCCTGTTGGGAGTTTTC +
Preference number: 5 (lower is better)
Translates to: MRFTEAEAPGLLITITYFQFQMR*SLLGVF
Trigger: GAAAACTCCCAACAGGCTCAAACGCATTTGGAATTG...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGCTCTGGGAAATCATATaGAGGATTGTCTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: NRHCTYLKTVPGGINTERLWEII*RIVCSE
Trigger: TTCAGAGCAGACAATCCTCAATATGATTTCCCAGAG...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ATCATATTGAGGATTGTCTGCTCTGAAGTCTTTTCATCTGTTCCTCGGTCATCTTCTGGCTACTATGTTTaGGATCACCAGGACGTTTGT +
Preference number: 5 (lower is better)
Translates to: IILRIVCSEVFSSVPRSSSGYYV*DHQDVC
Trigger: ACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGA...AGATGACCGAGGAACAGATGAAAAGACTTCAGAGCAGACAATCCTCAATATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATATATGTGCTAAGTTGCTaGTCTGGCTACTATGTTTTG +
Preference number: 5 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIYVLSC*SGYYVL
Trigger: CAAAACATAGTAGCCAGACAAGCAACTTAGCACATA...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTGTTTTATGTGCTAAGTaGCTTGTCTGGCTACTATGT +
Preference number: 5 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPVLCAK*LVWLLC
Trigger: ACATAGTAGCCAGACAAGCAACTTAGCACATAAAAC...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTTGTCTTGATAGTCTATaGTCTGGGTCGTGTTGTGAC +
Preference number: 5 (lower is better)
Translates to: MRFTEAEAPGLLITITYFCLDSL*SGSCCD
Trigger: GTCACAACACGACCCAGACAATAGACTATCAAGACA...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TTACAGGTCAACAGAGAGCTCCTCGTTTTATACCCAGCAATGGCAGGAACTCTATTCTCTAGTAGACTGTaGGAAAATGAAAACGGTAAG +
Preference number: 5 (lower is better)
Translates to: LQVNRELLVLYPAMAGTLFSSRL*ENENGK
Trigger: CTTACCGTTTTCATTTTCCAACAGTCTACTAGAGAA...TAGAGTTCCTGCCATTGCTGGGTATAAAACGAGGAGCTCTCTGTTGACCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACCTTCTCCCATATGGTTaGGGCTTTCACAGGCAGGAT +
Preference number: 5 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANLLPYG*GFHRQD
Trigger: ATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAG...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGTCTCTAATGGCACATTCCCTTTaGGAAACAGACTCCAACAAA +
Preference number: 5 (lower is better)
Translates to: HCTYLKTVPGGINTERSLMAHSL*ETDSNK
Trigger: TTTGTTGGAGTCTGTTTCCAAAAGGGAATGTGCCAT...TAGAGACCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTCTTCAGAAGACCGATTaGGATCGATGCTTCACTACA +
Preference number: 5 (lower is better)
Translates to: MRFTEAEAPGLLITITYFLQKTD*DRCFTT
Trigger: TGTAGTGAAGCATCGATCCAAATCGGTCTTCTGAAG...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACAGGGCCCCTCTACAATaGCCTTTACTTGGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANRAPLQ*PLLGSH
Trigger: ATGGCTTCCAAGTAAAGGCAATTGTAGAGGGGCCCT...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ACAATTTCATTGTTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCAGGGCCCCTCTACAATaGCCTTTACTTGGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: TISLFLVSSSFSHMVWAFRAPLQ*PLLGSH
Trigger: ATGGCTTCCAAGTAAAGGCAATTGTAGAGGGGCCCT...GAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAACAATGAAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp AACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAAAGGATTACTGTACCGTGCTaGTTTCAAACTCACATCCAC +
Preference number: 5 (lower is better)
Translates to: NRHCTYLKTVPGGINTERITVPC*FQTHIH
Trigger: GTGGATGTGAGTTTGAAACAAGCACGGTACAGTAAT...CCTTTCTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATATATACTATAGCAGTGTaGATAGTCAATTGTGAGACG +
Preference number: 5 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIYTIAV*IVNCET
Trigger: CGTCTCACAATTGACTATCAACACTGCTATAGTATA...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGACATGTTCCAATTTTTaGGGCTGCTCCTCCACTTTA +
Preference number: 5 (lower is better)
Translates to: LKTDTVRILRQYQEALTQTCSNF*GCSSTL
Trigger: TAAAGTGGAGGAGCAGCCCAAAAAATTGGAACATGT...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTCAAGTATGTGCTACCTaGATGACATGTTCCAATTTT +
Preference number: 5 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPQVCAT*MTCSNF
Trigger: AAAATTGGAACATGTCATCAAGGTAGCACATACTTG...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCAGATCTTGAACTTGTaGCAAATAAGCCTCACTTCT +
Preference number: 5 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMQILNL*QISLTS
Trigger: AGAAGTGAGGCTTATTTGCAACAAGTTCAAGATCTG...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp CAGGAGTTACTGCTATGTATCATATACACACAGCAAAATCCCTATCCCCTTCCCTATGTGGGTGATCAATaGTTAGTTCAAAGCCTAAAG +
Preference number: 5 (lower is better)
Translates to: QELLLCIIYTQQNPYPLPYVGDQ*LVQSLK
Trigger: CTTTAGGCTTTGAACTAACAATTGATCACCCACATA...GGGAAGGGGATAGGGATTTTGCTGTGTGTATATGATACATAGCAGTAACTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACTTAAACCTGCAATGGTaGTGTCTGAAGAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANLNLQW*CLKSSG
Trigger: CCCAGAGCTCTTCAGACACAACCATTGCAGGTTTAA...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCGCATTTTTATATTGTGACTTCACATaGGCTTCCATGTTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PLQNCAYQLQHGLLCAFLYCDFT*ASMFSS
Trigger: ACTGGAGAACATGGAAGCCAATGTGAAGTCACAATA...TAAAAATGCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp GTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATATACATAATTTTGAGAGCTGTTTaGTCAGCCTTTTCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: VSSSFSHMVWAFTGRIYIILRAV*SAFSRK
Trigger: TTTTCTGGAAAAGGCTGACAAAACAGCTCTCAAAAT...TATGTATATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TTTGAAGGTACAAGGATAGGAAAGACACATAGAGCTCAGAAACCACACAGCCCTATTTTGAGAGCTGTTTaGTCAGCCTTTTCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: FEGTRIGKTHRAQKPHSPILRAV*SAFSRK
Trigger: TTTTCTGGAAAAGGCTGACAAAACAGCTCTCAAAAT...AGGGCTGTGTGGTTTCTGAGCTCTATGTGTCTTTCCTATCCTTGTACCTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCGCATTTTTATTATCTCCTCTGGTTTaGAAGACGCAGCTTTATCTC +
Preference number: 5 (lower is better)
Translates to: PLQNCAYQLQHGLLCAFLLSPLV*KTQLYL
Trigger: GAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATAA...TAAAAATGCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp TTTTTAGTATCCTCTAGCTTCTCCCATATGGTTTGGGCTTTCACAGGCAGGATACATATTCACAGTGTCTaGATAGTCTATTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: FLVSSSFSHMVWAFTGRIHIHSV*IVYCLG
Trigger: ACCCAGACAATAGACTATCAAGACACTGTGAATATG...TATCCTGCCTGTGAAAGCCCAAACCATATGGGAGAAGCTAGAGGATACTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GTAACACTGTCCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGTATACTATAGCAGTGTaGATAGTCAATTGTGAGACG +
Preference number: 5 (lower is better)
Translates to: VTLSSTELCLSAAAWTFMYTIAV*IVNCET
Trigger: CGTCTCACAATTGACTATCAACACTGCTATAGTATA...CATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGGACAGTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACCGAAAGGATCCACAATaGTCTGATACAAGAAACCCT +
Preference number: 5 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNRKDPQ*SDTRNP
Trigger: AGGGTTTCTTGTATCAGACAATTGTGGATCCTTTCG...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp TTATGTGCTAAGTTGCTTGTCTGGCTACTATGTTTTGGATCACCAGGACGTTTGTCACCATTTGATGAGTaGCATAGACTGCTTAAATTC +
Preference number: 5 (lower is better)
Translates to: LCAKLLVWLLCFGSPGRLSPFDE*HRLLKF
Trigger: GAATTTAAGCAGTCTATGCAACTCATCAAATGGTGA...CAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS-3UTR CAA 90 bp CTAAAAACAGACACTGTACGTATCTTAAGACAGTACCAGGAGGCATTAACACAGAATCTCACCACAAAATaGTACCTGAGTGACAGATTG +
Preference number: 5 (lower is better)
Translates to: LKTDTVRILRQYQEALTQNLTTK*YLSDRL
Trigger: CAATCTGTCACTCAGGTACAATTTTGTGGTGAGATT...CTGTGTTAATGCCTCCTGGTACTGTCTTAAGATACGTACAGTGTCTGTTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp ATGAGATTTACAGAAGCTGAGGCTCCAGGCCTACTTATCACCATCACTTATTTTCAAGTATGTGCTACCTaGATGACATGTTCCAATTTT +
Preference number: 5 (lower is better)
Translates to: MRFTEAEAPGLLITITYFQVCAT*MTCSNF
Trigger: AAAATTGGAACATGTCATCAAGGTAGCACATACTTG...AAAATAAGTGATGGTGATAAGTAGGCCTGGAGCCTCAGCTTCTGTAAATCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GAATGTGTCCTTAATCCTTCACAGCTTCAACACCTCTCTAATACCAGTAAAAACCAGATCTTGAACTTGTaGCAAATAAGCCTCACTTCT +
Preference number: 5 (lower is better)
Translates to: ECVLNPSQLQHLSNTSKNQILNL*QISLTS
Trigger: AGAAGTGAGGCTTATTTGCAACAAGTTCAAGATCTG...GTTTTTACTGGTATTAGAGAGGTGTTGAAGCTGTGAAGGATTAAGGACACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp CCTCTACAGAATTGTGCTTATCAGCTGCAGCATGGACTTTTATGCGCATTTTTAATTTTGAGAGCTGTTTaGTCAGCCTTTTCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: PLQNCAYQLQHGLLCAFLILRAV*SAFSRK
Trigger: TTTTCTGGAAAAGGCTGACAAAACAGCTCTCAAAAT...TAAAAATGCGCATAAAAGTCCATGCTGCAGCTGATAAGCACAATTCTGTAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000417344.2
ENST00000618666.4
CDS-3UTR CAA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACTTCTCTAGTAGACTGTaGGAAAATGAAAACGGTAAG +
Preference number: 5 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDFSSRL*ENENGK
Trigger: CTTACCGTTTTCATTTTCCAACAGTCTACTAGAGAA...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp GGCTATTTCTCACCATTTGATGAGTTGCATAGACTGCTTAAATTCTCCCAAGACTCACCATTTGATGAGTaGCATAGACTGCTTAAATTC +
Preference number: 5 (lower is better)
Translates to: GYFSPFDELHRLLKFSQDSPFDE*HRLLKF
Trigger: GAATTTAAGCAGTCTATGCAACTCATCAAATGGTGA...GTCTTGGGAGAATTTAAGCAGTCTATGCAACTCATCAAATGGTGAGAAATAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS-3UTR CAA 90 bp AGGTATCTGATTAAAAGCCTTAAGGACAATCCACAGGTATTTGTTTTTGCCAACGTTTTATGTGCTAAGTaGCTTGTCTGGCTACTATGT +
Preference number: 5 (lower is better)
Translates to: RYLIKSLKDNPQVFVFANVLCAK*LVWLLC
Trigger: ACATAGTAGCCAGACAAGCAACTTAGCACATAAAAC...GTTGGCAAAAACAAATACCTGTGGATTGTCCTTAAGGCTTTTAATCAGATACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261900.8
ENST00000618666.4
CDS TCA 72 bp GCGACCCACATCCGCTGTGCGGGGGCAACTGCGACTTaGCGAACTTCCGCTAAGCGTCGACCGCCGGGTTGT +
Preference number: 6 (lower is better)
Translates to: ATHIRCAGATAT*RTSAKRRPPGC
Trigger: ACAACCCGGCGGTCGACGCTTAGCGGAAGTTCGTCAAGTCGCAGTTGCCCCCGCACAGCGGATGTGGGTCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS GCA 72 bp TCCATAGTGCTTCAACCAGAAGGCAGCGGCGAAGGCTaGAGGCACTTCCCAGCGTCACCTAAGAGGCGACCC +
Preference number: 6 (lower is better)
Translates to: SIVLQPEGSGEG*RHFPASPKRRP
Trigger: GGGTCGCCTCTTAGGTGACGCTGGGAAGTGCCTGCAGCCTTCGCCGCTGCCTTCTGGTTGAAGCACTATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS CCA 72 bp GCGAGGACGCAGGCGCGTCACGTGACCGTTGGGCGGTaGAGTGGGGTTAGAAGTTCTTTCTTAAAAACCGTG +
Preference number: 6 (lower is better)
Translates to: ARTQARHVTVGR*SGVRSSFLKTV
Trigger: CACGGTTTTTAAGAAAGAACTTCTAACCCCACTCCACCGCCCAACGGTCACGTGACGCGCCTGCGTCCTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS GCA 72 bp GAACTTCCGCTAAGCGTCGACCGCCGGGTTGTTACTTaGCTCCGTAGAGGAAGCAAAAGTCAAAGGACCTAC +
Preference number: 6 (lower is better)
Translates to: ELPLSVDRRVVT*LRRGSKSQRTY
Trigger: GTAGGTCCTTTGACTTTTGCTTCCTCTACGGAGGCAAGTAACAACCCGGCGGTCGACGCTTAGCGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618666.4
CDS CCA 72 bp CATGTGTCAGTTCATCTAAAAGTTCCAAGGTCACAGTaGCGTCAACATACTCCCACCAGTGCTTCCCGTCAG +
Preference number: 6 (lower is better)
Translates to: HVSVHLKVPRSQ*RQHTPTSASRQ
Trigger: CTGACGGGAAGCACTGGTGGGAGTATGTTGACGCCACTGTGACCTTGGAACTTTTAGATGAACTGACACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261900.8
CDS CAA 90 bp GGGCTATTTTCCAGCTGTTCTCGAGTGAAATACCACCGTTTGTTGTaGTTCTTCCTCTCTCCCTCCATAGTGCTTCAACCAGAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: GLFSSCSRVKYHRLL*FFLSPSIVLQPEGS
Trigger: GCTGCCTTCTGGTTGAAGCACTATGGAGGGAGAGAGGAAGAACAACAACAAACGGTGGTATTTCACTCGAGAACAGCTGGAAAATAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261900.8
ENST00000618666.4
ENST00000640148.1
CDS CAA 90 bp GATGGGCTATTTTCCAGCTGTTCTCGAGTGAAATACCACCGTTTGTaGTTGTTCTTCCTCTCTCCCTCCATAGTGCTTCAACCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: DGLFSSCSRVKYHRL*LFFLSPSIVLQPEG
Trigger: GCCTTCTGGTTGAAGCACTATGGAGGGAGAGAGGAAGAACAACAACAAACGGTGGTATTTCACTCGAGAACAGCTGGAAAATAGCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261900.8
ENST00000618666.4
ENST00000640148.1
CDS CAA 90 bp GGATGGAGACAAGTATGTGCTACCTTGATGACATGTTCCAATTTTTaGGGCTGCTCCTCCACTTTAGCTGCTAGAAACAAGGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: GWRQVCATLMTCSNF*GCSSTLAARNKAAG
Trigger: TCCAGCAGCCTTGTTTCTAGCAGCTAAAGTGGAGGAGCAGCCCAAAAAATTGGAACATGTCATCAAGGTAGCACATACTTGTCTCCATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261900.8
ENST00000417344.2
ENST00000550457.1
ENST00000618666.4
ENST00000640148.1
CDS TCA 72 bp AACGACGGGATGGGCTATTTTCCAGCTGTTCTCGAGTaGAATACCACCGTTTGTTGTTGTTCTTCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: NDGMGYFPAVLE*NTTVCCCSSSL
Trigger: GAGAGAGGAAGAACAACAACAAACGGTGGTATTTCACTCGAGAACAGCTGGAAAATAGCCCATCCCGTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261900.8
ENST00000417344.2
ENST00000618666.4
ENST00000640148.1
CDS CAA 72 bp TCCAGCTGTTCTCGAGTGAAATACCACCGTTTGTTGTaGTTCTTCCTCTCTCCCTCCATAGTGCTTCAACCA +
Preference number: 6 (lower is better)
Translates to: SSCSRVKYHRLL*FFLSPSIVLQP
Trigger: TGGTTGAAGCACTATGGAGGGAGAGAGGAAGAACAACAACAAACGGTGGTATTTCACTCGAGAACAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261900.8
ENST00000618666.4
ENST00000640148.1
CDS TCA 72 bp TCTCCTACCTCACTTCTAGTATCAGGAAGGGATTCCTaGGGATGGAGACAAGTATGTGCTACCTTGATGACA +
Preference number: 6 (lower is better)
Translates to: SPTSLLVSGRDS*GWRQVCATLMT
Trigger: TGTCATCAAGGTAGCACATACTTGTCTCCATCCTCAGGAATCCCTTCCTGATACTAGAAGTGAGGTAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550457.1
CDS GCA 72 bp TCTGTGCTAAGTCCTTGCTTGCTCGAACAAGTTGAGTaGACTTTACTACATGAGTATGTGGGTGATCAATTG +
Preference number: 6 (lower is better)
Translates to: SVLSPCLLEQVE*TLLHEYVGDQL
Trigger: CAATTGATCACCCACATACTCATGTAGTAAAGTGCACTCAACTTGTTCGAGCAAGCAAGGACTTAGCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261900.8
ENST00000417344.2
ENST00000618666.4
ENST00000640148.1
CDS CAA 72 bp GAGTGCACTTTACTACATGAGTATGTGGGTGATCAATaGTTAGTTCAAAGCCTAAAGTCTGCAAAATTATGC +
Preference number: 6 (lower is better)
Translates to: ECTLLHEYVGDQ*LVQSLKSAKLC
Trigger: GCATAATTTTGCAGACTTTAGGCTTTGAACTAACAATTGATCACCCACATACTCATGTAGTAAAGTGCACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261900.8
ENST00000417344.2
ENST00000618666.4
ENST00000640148.1