RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCNJL (Homo sapiens)

Ensembl gene IDs: ENSG00000135083

Ensembl transcript IDs: ENST00000257536.13, ENST00000377503.6, ENST00000393977.7, ENST00000518764.1, ENST00000519673.1, ENST00000520748.1, ENST00000521643.1, ENST00000541762.5, ENST00000643539.1, ENST00000643836.1, ENST00000644313.1, ENST00000644926.1

Found 1678 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTTCCTGCCTCACCTAGCCTTGCACACAGCGGGTGGTGAGCACTaGCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTC +
Preference number: 1 (lower is better)
Translates to: SFLPHLALHTAGGEH*PQPRPWRCQTHSWV
Trigger: GACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTCACCACCCGCTGTGTGCAAGGCTAGGTGAGGCAGGAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CCA 90 bp GGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGGTGTaGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACGG +
Preference number: 1 (lower is better)
Translates to: GTGHISKGCSGWYGV*RDEPVLPESRLPER
Trigger: CCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CCA 90 bp GATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTaGTACGGGGTGTGGAGGGATGAGCCTGTACTCCCCGAGAGCAGG +
Preference number: 1 (lower is better)
Translates to: DAGTGTGHISKGCSG*YGVWRDEPVLPESR
Trigger: CCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR GCA 90 bp ATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTaGAGCGGTTGGTACGGGGTGTGGAGGGATGAGCCTGTACTCCCC +
Preference number: 1 (lower is better)
Translates to: MLRDAGTGTGHISKG*SGWYGVWRDEPVLP
Trigger: GGGGAGTACAGGCTCATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR GCA 90 bp GTAGCTGCTTCCATAGGTGGTGGCGAGGCAGTGCCTGGGCTCAGCTaGAATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGG +
Preference number: 1 (lower is better)
Translates to: VAASIGGGEAVPGLS*NGHMHAKGCRDGHG
Trigger: CCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CCA 90 bp CAGCAGGGTCAGGATGTCCACGAAGAACCGGCGGCTCTTCAGGAGTaGGGAGTGGGCTCGGAAGGTGGGCAGCTTCAGTTCCTTCTGGAG +
Preference number: 1 (lower is better)
Translates to: QQGQDVHEEPAALQE*GVGSEGGQLQFLLE
Trigger: CTCCAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGACCCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR TCA 90 bp AACTTAGAGCTTCCTGCCTCACCTAGCCTTGCACACAGCGGGTGGTaGGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTC +
Preference number: 1 (lower is better)
Translates to: NLELPASPSLAHSGW*ALPSAPPLAVSNTL
Trigger: GAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTCACCACCCGCTGTGTGCAAGGCTAGGTGAGGCAGGAAGCTCTAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR GCA 90 bp GCAGTGCCTGGGCTCAGCTGCAATGGCCATATGCATGCTAAGGGATaGAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTG +
Preference number: 1 (lower is better)
Translates to: AVPGLSCNGHMHAKG*RDGHGTHIQGLQRL
Trigger: CAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATTGCAGCTGAGCCCAGGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CCA 90 bp ACAGCCCACCAGTCAGTCAGGCCAGCACCCAGGATACGCAGTGCCTaGCAGGTGGAAGGGGAACTGGACAGTGTGTGCCTACTGGGAATG +
Preference number: 1 (lower is better)
Translates to: TAHQSVRPAPRIRSA*QVEGELDSVCLLGM
Trigger: CATTCCCAGTAGGCACACACTGTCCAGTTCCCCTTCCACCTGCCAGGCACTGCGTATCCTGGGTGCTGGCCTGACTGACTGGTGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 90 bp GTCAGGATGTCCACGAAGAACCGGCGGCTCTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGCTTCAGTTCCTTCTGGAGTGGAGGA +
Preference number: 1 (lower is better)
Translates to: VRMSTKNRRLFRSGE*ARKVGSFSSFWSGG
Trigger: TCCTCCACTCCAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR TCA 90 bp TGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTaGAGTAGCTGCTTCCATAGGTGGTGGCGAGGCAGTGCCTGGGCT +
Preference number: 1 (lower is better)
Translates to: WPICQSSRWGTCGSH*SSCFHRWWRGSAWA
Trigger: AGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CCA 90 bp GGCCAGCACCCAGGATACGCAGTGCCTGGCAGGTGGAAGGGGAACTaGACAGTGTGTGCCTACTGGGAATGGCTCTGTCCTGTTTGCCTT +
Preference number: 1 (lower is better)
Translates to: GQHPGYAVPGRWKGN*TVCAYWEWLCPVCL
Trigger: AAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACACTGTCCAGTTCCCCTTCCACCTGCCAGGCACTGCGTATCCTGGGTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 90 bp ACCAGTCAGTCAGGCCAGCACCCAGGATACGCAGTGCCTGGCAGGTaGAAGGGGAACTGGACAGTGTGTGCCTACTGGGAATGGCTCTGT +
Preference number: 1 (lower is better)
Translates to: TSQSGQHPGYAVPGR*KGNWTVCAYWEWLC
Trigger: ACAGAGCCATTCCCAGTAGGCACACACTGTCCAGTTCCCCTTCCACCTGCCAGGCACTGCGTATCCTGGGTGCTGGCCTGACTGACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 90 bp CTTCCTCTGCCCACATCTCCAAGGCTTCCTCGTGAGGTCTGGAGGTaGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCAC +
Preference number: 1 (lower is better)
Translates to: LPLPTSPRLPREVWR*PICQSSRWGTCGSH
Trigger: GTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGGGCAGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR TCA 90 bp CACCAATGCCTTCCCATCCCCTGGCACTGGAGTGTTCCTGGGGCCTaGATGAGCCCAATCTCTGCTTTCCAGGCAATTCTGGGCCAGCTC +
Preference number: 1 (lower is better)
Translates to: HQCLPIPWHWSVPGA*MSPISAFQAILGQL
Trigger: GAGCTGGCCCAGAATTGCCTGGAAAGCAGAGATTGGGCTCATTCAGGCCCCAGGAACACTCCAGTGCCAGGGGATGGGAAGGCATTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
3UTR GCA 90 bp CACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCTCCTCTTCAGTGTCCTCTTCCTCTG +
Preference number: 1 (lower is better)
Translates to: HRPSTFQGSSGMASC*LTWLSSPLQCPLPL
Trigger: CAGAGGAAGAGGACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR GCA 90 bp GAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGCTCTCCTCTTCAGTGTCCTCTTCCT +
Preference number: 1 (lower is better)
Translates to: EHRPSTFQGSSGMAS*CLTWLSSPLQCPLP
Trigger: AGGAAGAGGACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR GCA 90 bp AGGATACGCAGTGCCTGGCAGGTGGAAGGGGAACTGGACAGTGTGTaGCTACTGGGAATGGCTCTGTCCTGTTTGCCTTGCTCCCTGCAG +
Preference number: 1 (lower is better)
Translates to: RIRSAWQVEGELDSV*LLGMALSCLPCSLQ
Trigger: CTGCAGGGAGCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACACTGTCCAGTTCCCCTTCCACCTGCCAGGCACTGCGTATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR TCA 90 bp GCTGAGATTTTCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTGCCTTCCTGGCGGCCCCTGCCACAG +
Preference number: 1 (lower is better)
Translates to: AEIFSCSGKIHHLPI*LSSRQLPSWRPLPQ
Trigger: CTGTGGCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 90 bp TCTGCACTTAGCAAATGTCTCAGCCCCACAGTGACACCGGCTCTCTaGGGTGGTTCTCCTGCTGGAAGCTGGGTAGGTAGAGGGCAAGAC +
Preference number: 1 (lower is better)
Translates to: SALSKCLSPTVTPAL*GGSPAGSWVGRGQD
Trigger: GTCTTGCCCTCTACCTACCCAGCTTCCAGCAGGAGAACCACCCCAGAGAGCCGGTGTCACTGTGGGGCTGAGACATTTGCTAAGTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CCA 90 bp CCTGGCAGGTGGAAGGGGAACTGGACAGTGTGTGCCTACTGGGAATaGCTCTGTCCTGTTTGCCTTGCTCCCTGCAGTAACTATGGGGCA +
Preference number: 1 (lower is better)
Translates to: PGRWKGNWTVCAYWE*LCPVCLAPCSNYGA
Trigger: TGCCCCATAGTTACTGCAGGGAGCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACACTGTCCAGTTCCCCTTCCACCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR GCA 90 bp AGGGCTGATTTGAGAGAGGGAAGGAGGGGCCGGCCCAAGAGGGGATaGCTAGGACAAGAGGTGAGAGATCAAGAGCAGGTGACGTGTTTA +
Preference number: 1 (lower is better)
Translates to: RADLREGRRGRPKRG*LGQEVRDQEQVTCL
Trigger: TAAACACGTCACCTGCTCTTGATCTCTCACCTCTTGTCCTAGGCATCCCCTCTTGGGCCGGCCCCTCCTTCCCTCTCTCAAATCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CCA 90 bp GCAGTGCCTGGCAGGTGGAAGGGGAACTGGACAGTGTGTGCCTACTaGGAATGGCTCTGTCCTGTTTGCCTTGCTCCCTGCAGTAACTAT +
Preference number: 1 (lower is better)
Translates to: AVPGRWKGNWTVCAY*EWLCPVCLAPCSNY
Trigger: ATAGTTACTGCAGGGAGCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACACTGTCCAGTTCCCCTTCCACCTGCCAGGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR TCA 90 bp CTCGAAACCCCACTTCTACCAGGAGTCACCATGGCCCACTTTCCCTaGGACCCTGTAGCTGGAAGAACCACCACAAGTTCCAGACTCTGG +
Preference number: 1 (lower is better)
Translates to: LETPLLPGVTMAHFP*DPVAGRTTTSSRLW
Trigger: CCAGAGTCTGGAACTTGTGGTGGTTCTTCCAGCTACAGGGTCTCAGGGAAAGTGGGCCATGGTGACTCCTGGTAGAAGTGGGGTTTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR GCA 90 bp ACGCCCTCTGTTATCCAGGGGAAGAGGTCCCGATGTCCCCCTCCATaGTGGTTCTCTGTCACAGGTCCAATTCTTGGATCTCTCCGCTTT +
Preference number: 1 (lower is better)
Translates to: TPSVIQGKRSRCPPP*WFSVTGPILGSLRF
Trigger: AAAGCGGAGAGATCCAAGAATTGGACCTGTGACAGAGAACCAGCATGGAGGGGGACATCGGGACCTCTTCCCCTGGATAACAGAGGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR CCA 90 bp CTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAACTTACCTGCTCCCAGCTGCAAGTGC +
Preference number: 1 (lower is better)
Translates to: LLRILVLFICSNLGT*SSRSSNLPAPSCKC
Trigger: GCACTTGCAGCTGGGAGCAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 90 bp CCCTCTGTTATCCAGGGGAAGAGGTCCCGATGTCCCCCTCCATGCTaGTTCTCTGTCACAGGTCCAATTCTTGGATCTCTCCGCTTTCCT +
Preference number: 1 (lower is better)
Translates to: PSVIQGKRSRCPPPC*FSVTGPILGSLRFP
Trigger: AGGAAAGCGGAGAGATCCAAGAATTGGACCTGTGACAGAGAACCAGCATGGAGGGGGACATCGGGACCTCTTCCCCTGGATAACAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR GCA 90 bp CTCGCAAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAAAAGCACCCAATATGGGATCCTCCG +
Preference number: 1 (lower is better)
Translates to: LARQTLRHTHQLRPL*IEPGKEKHPIWDPP
Trigger: CGGAGGATCCCATATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTTGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR GCA 90 bp GGGAACTGGACAGTGTGTGCCTACTGGGAATGGCTCTGTCCTGTTTaGCTTGCTCCCTGCAGTAACTATGGGGCACATTTACCTCCAGTG +
Preference number: 1 (lower is better)
Translates to: GNWTVCAYWEWLCPV*LAPCSNYGAHLPPV
Trigger: CACTGGAGGTAAATGTGCCCCATAGTTACTGCAGGGAGCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACACTGTCCAGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 90 bp AGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGATCCTCGAACTTACCTGCTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: SSGCSGSSCCLFAPT*GRGLPDPRTYLLPA
Trigger: AGCTGGGAGCAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR TCA 90 bp CAGCAGGATTTCAATACACGTGCTGAGGTGCTCCAGGGAATAGCTTaGGATCCTCTGCAGGTCTCTGGTCCAGTAGGGAGAAAGCTGCAG +
Preference number: 1 (lower is better)
Translates to: QQDFNTRAEVLQGIA*DPLQVSGPVGRKLQ
Trigger: CTGCAGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR TCA 90 bp GGAAGAACCACCACAAGTTCCAGACTCTGGAAACTGCCCGTGGCCTaGGGCAGGCCTCAAGGCAAGAGGAACCTCACTATTTCAGAAACA +
Preference number: 1 (lower is better)
Translates to: GRTTTSSRLWKLPVA*GRPQGKRNLTISET
Trigger: TGTTTCTGAAATAGTGAGGTTCCTCTTGCCTTGAGGCCTGCCTCAGGCCACGGGCAGTTTCCAGAGTCTGGAACTTGTGGTGGTTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR GCA 90 bp GTGAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACCT +
Preference number: 1 (lower is better)
Translates to: VRVKFWLLRILVLFI*SNLGTWSSRSSNLP
Trigger: AGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR GCA 90 bp GTGTGTGCCTACTGGGAATGGCTCTGTCCTGTTTGCCTTGCTCCCTaGAGTAACTATGGGGCACATTTACCTCCAGTGTCAGTTTCAGGG +
Preference number: 1 (lower is better)
Translates to: VCAYWEWLCPVCLAP*SNYGAHLPPVSVSG
Trigger: CCCTGAAACTGACACTGGAGGTAAATGTGCCCCATAGTTACTGCAGGGAGCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR GCA 90 bp GTGAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACCA +
Preference number: 1 (lower is better)
Translates to: VRVKFWLLRILVLFI*SNLGTWSSRSSNLP
Trigger: TGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR CCA 90 bp TGGACATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTaGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGG +
Preference number: 1 (lower is better)
Translates to: WTCLRSVVCVQFPLS*PLIKSFSIHWAPVW
Trigger: CCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCATGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 90 bp AACACAATCTTACATGGGAGTGCCCAAGGGTGGAAGAAATACAAGTaGATCCCTCTGGCTGAAGGCCACAGAGGTCACAGCCTCTGTGGC +
Preference number: 1 (lower is better)
Translates to: NTILHGSAQGWKKYK*IPLAEGHRGHSLCG
Trigger: GCCACAGAGGCTGTGACCTCTGTGGCCTTCAGCCAGAGGGATCCACTTGTATTTCTTCCACCCTTGGGCACTCCCATGTAAGATTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR GCA 90 bp GTGAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACTT +
Preference number: 1 (lower is better)
Translates to: VRVKFWLLRILVLFI*SNLGTWSSRSSNLL
Trigger: AAGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR CCA 90 bp AGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGATCCTCGAACTTACTTGCAAGCAGGA +
Preference number: 1 (lower is better)
Translates to: SSGCSGSSCCLFAPT*GRGLPDPRTYLQAG
Trigger: TCCTGCTTGCAAGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR TCA 90 bp GATTCAGGGGAGAAACTTACACCAGCAGGATTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGCTTGAGATCCTCTGCAGGTCTCTGG +
Preference number: 1 (lower is better)
Translates to: DSGEKLTPAGFQYTC*GAPGNSLRSSAGLW
Trigger: CCAGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTGTAAGTTTCTCCCCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR GCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCC +
Preference number: 1 (lower is better)
Translates to: SLQIPKYWLLIQPVA*LSMVVSNAHVHPTP
Trigger: GGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 90 bp GGTGAACACAGCCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCT +
Preference number: 1 (lower is better)
Translates to: GEHSLQDVESSGTES*ENGSLQPYAFKKEA
Trigger: AGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGTGTTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGG +
Preference number: 1 (lower is better)
Translates to: STLLSFAISHTQSLD*VKLMPCKYVVERGG
Trigger: CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 90 bp ACAAGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTaGCTTTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCA +
Preference number: 1 (lower is better)
Translates to: TRVFLRALSLQIPKY*LLIQPVACLSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 90 bp TCCAGCATGGGAATTAACACAATCTTACATGGGAGTGCCCAAGGGTaGAAGAAATACAAGTGGATCCCTCTGGCTGAAGGCCACAGAGGT +
Preference number: 1 (lower is better)
Translates to: SSMGINTILHGSAQG*KKYKWIPLAEGHRG
Trigger: ACCTCTGTGGCCTTCAGCCAGAGGGATCCACTTGTATTTCTTCCACCCTTGGGCACTCCCATGTAAGATTGTGTTAATTCCCATGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR TCA 90 bp AAATCATGCCTGAGTTTCCAGCCTGTGGGCCTGCCCTACAGATTTTaGACTCTACTGCAACATCAGCTCTTACCTGAATTTCCAGCCTGC +
Preference number: 1 (lower is better)
Translates to: KSCLSFQPVGLPYRF*TLLQHQLLPEFPAC
Trigger: GCAGGCTGGAAATTCAGGTAAGAGCTGATGTTGCAGTAGAGTTCAAAATCTGTAGGGCAGGCCCACAGGCTGGAAACTCAGGCATGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR TCA 90 bp TCAGTTTCAGGGTGTTGGGCTCATGATGCCTTTAAGTATCTTCTCTaGCACACTGAACATTTCCTCCCCAAGATTCCCAGGGACCCTTGC +
Preference number: 1 (lower is better)
Translates to: SVSGCWAHDAFKYLL*HTEHFLPKIPRDPC
Trigger: GCAAGGGTCCCTGGGAATCTTGGGGAGGAAATGTTCAGTGTGTCAGAGAAGATACTTAAAGGCATCATGAGCCCAACACCCTGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR GCA 90 bp TCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAG +
Preference number: 1 (lower is better)
Translates to: SFCTLATRGRRFSEE*SRVRYVIECFALGQ
Trigger: CTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 90 bp ACAACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTaGCAGAGTCTTATCCACACCCCGTCTCTTTTCTTACTGTCTCCA +
Preference number: 1 (lower is better)
Translates to: TTTNERAASYASVTR*QSLIHTPSLFLLSP
Trigger: TGGAGACAGTAAGAAAAGAGACGGGGTGTGGATAAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAAC +
Preference number: 1 (lower is better)
Translates to: WVVIKVLVVNTASKT*NLPEPRAGKMVLSN
Trigger: GTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR GCA 90 bp GGGCTAAGGAATCCAAGACAGGTATTCCTCAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAA +
Preference number: 1 (lower is better)
Translates to: GLRNPRQVFLKQNKN*FHGPLHLPVLLGEQ
Trigger: TTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTGAGGAATACCTGTCTTGGATTCCTTAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 90 bp GAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTC +
Preference number: 1 (lower is better)
Translates to: ENGSLQPYAFKKEAL*LPAGPSQVGFKLGF
Trigger: GAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 90 bp GAGCTTAGAACCATCCACCAACTTGACCATCTCCATAGTAACAGATaGAGAAATGGAAGCCCAAAGAGGGAGGGATTTGTCCAAAGTGAG +
Preference number: 1 (lower is better)
Translates to: ELRTIHQLDHLHSNR*RNGSPKREGFVQSE
Trigger: CTCACTTTGGACAAATCCCTCCCTCTTTGGGCTTCCATTTCTCCATCTGTTACTATGGAGATGGTCAAGTTGGTGGATGGTTCTAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACG +
Preference number: 1 (lower is better)
Translates to: NCLNLCLPFNELLPP*VVIKVLVVNTASKT
Trigger: CGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AAGTGGGCAGGCGTGGGCAGGCAGAGGTTCCAGCTGAAGGCCTCCAGGAGCAGCGCTGCAGGGCAGAGCTaGCAGTGGCTGCTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: KWAGVGRQRFQLKASRSSAAGQS*QWLLSR
Trigger: CCTGCTGAGCAGCCACTGCCAGCTCTGCCCTGCAGC...GCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR CCA 90 bp GGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGGTGTGGTCTGGAGTGGAGGACTaGGGTGCCCCTCATCCTCCC +
Preference number: 2 (lower is better)
Translates to: GTGTGHISKGCSGWYGVWSGVED*GAPHPP
Trigger: GGGAGGATGAGGGGCACCCCAGTCCTCCACTCCAGA...CCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR TCA 90 bp CACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGGCTGGTGGTCCTTCTGGCTaGCGGAGGCCAAGAGGTAGT +
Preference number: 2 (lower is better)
Translates to: HCPQPRPWRCQTHSWVWAGGPSG*RRPRGS
Trigger: ACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACC...AGCCCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CCA 90 bp GAGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGCAGGTGTGGCAGTGGTaGTCCTTCTGGCTGACGGAG +
Preference number: 2 (lower is better)
Translates to: EHCPQPRPWRCQTHSWVWQVWQW*SFWLTE
Trigger: CTCCGTCAGCCAGAAGGACCACCACTGCCACACCTG...CCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CCA 90 bp CACCAGTCAGTCAGGCCAGCACCCAGGATACGCAGTGCCTGGCAGGTGGAAGGGGTGGTGGGCCAGGTGTaGCAGTGGTGGTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: HQSVRPAPRIRSAWQVEGVVGQV*QWWSFW
Trigger: CCAGAAGGACCACCACTGCCACACCTGGCCCACCAC...CCCTTCCACCTGCCAGGCACTGCGTATCCTGGGTGCTGGCCTGACTGACTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 90 bp CCCACATCGGGGAGGGCTCTCTTCAGGGGTCTAAGGGCTTCCGCTTaGCCCACACAGCCCACCAGTCAGTCAGGCCAGCACCCAGGATAC +
Preference number: 2 (lower is better)
Translates to: PTSGRALFRGLRASA*PTQPTSQSGQHPGY
Trigger: GTATCCTGGGTGCTGGCCTGACTGACTGGTGGGCTGTGTGGGCAAAGCGGAAGCCCTTAGACCCCTGAAGAGAGCCCTCCCCGATGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR GCA 90 bp GATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGTCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: DAGTGTGHISKGCSGWYGSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...CCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AAGTGGGCAGGCGTGGGCAGGCAGAGGTTCCAGCTGAAGGCCTCCAGGAGCAGCGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: KWAGVGRQRFQLKASRSSENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...GCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTTCAGCAGCAGACAGCTaGCTTCCTGGCGGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGSAADS*LPGGPC
Trigger: GCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGA...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCTCAGCAGCAGACAGCTaGCTTCCTGGCGGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTISAADS*LPGGPC
Trigger: GCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGA...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GAGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGCGGCCCAAGAGGGGATaGCTAGGACAAGAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: EHCPQPRPWRCQTHSWVWRPKRG*LGQEVR
Trigger: TCTCACCTCTTGTCCTAGGCATCCCCTCTTGGGCCG...CCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGCCCTTGCAGAGGCTGTaGCGCTTAGGGGAGCTTACT +
Preference number: 2 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKPLQRL*RLGELT
Trigger: AGTAAGCTCCCCTAAGCGCCACAGCCTCTGCAAGGG...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACGGTGGGCCTGCATTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: GGMSLYSPRAGSLNGGPALQESS*GPSRCR
Trigger: TCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAA...TGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCCTTCCTGGCGGCCCCTaGCACAGTCTCCAGGACTGG +
Preference number: 2 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPLPGGP*HSLQDW
Trigger: CCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAG...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCATCTGGAAACTGCCCGTaGCCTGAGGCAGGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPSGNCP*PEAGLK
Trigger: CTTGAGGCCTGCCTCAGGCCACGGGCAGTTTCCAGA...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCAGCAGGCTCCCTGAACGGTaGGCCTGCAAGGAGTCCCGA +
Preference number: 2 (lower is better)
Translates to: PENTPGCPSFFSGVAAISRLPER*ACKESR
Trigger: TCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCT...GCTGATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: PCHSLQDWQGAKESKTGIILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACGGTGGGCCTGCACTCCAGGGAATAGCTTaGGATCCTCTGCAGGTCTCT +
Preference number: 2 (lower is better)
Translates to: GGMSLYSPRAGSLNGGPALQGIA*DPLQVS
Trigger: AGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAG...TGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTTCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 2 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GAGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 2 (lower is better)
Translates to: EHCPQPRPWRCQTHSWVWSSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...CCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGCCTGAATGAGCCCAATCTCTGCTTTCCAGGCAATTCTGGGCCAGCTCCATCCCTTCCTGGCGGCCCCTaGCACAGTCTCCAGGACTGG +
Preference number: 2 (lower is better)
Translates to: GLNEPNLCFPGNSGPAPSLPGGP*HSLQDW
Trigger: CCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAG...GGATGGAGCTGGCCCAGAATTGCCTGGAAAGCAGAGATTGGGCTCATTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 2 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKTASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp AAGTGGGCAGGCGTGGGCAGGCAGAGGTTCCAGCTGAAGGCCTCCAGGAGCAGCAATGGGCATACTCCTTaGGGCACTCTTTGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: KWAGVGRQRFQLKASRSSNGHTP*GTLWSC
Trigger: GCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATT...GCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGCTCCAGGGAATAGCTTaGGATCCTCTGCAGGTCTCT +
Preference number: 2 (lower is better)
Translates to: DAGTGTGHISKGCSGWYGLQGIA*DPLQVS
Trigger: AGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAG...CCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GAGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGAGAGGTTGGGTCAACTaGCTTCCAACAGCTGGTAAG +
Preference number: 2 (lower is better)
Translates to: EHCPQPRPWRCQTHSWVWRGWVN*LPTAGK
Trigger: CTTACCAGCTGTTGGAAGGCAGTTGACCCAACCTCT...CCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGATCCTCGAACTTACCTaGTCCCAGCTGCAAGTGCCT +
Preference number: 2 (lower is better)
Translates to: GMQGRARDTYPRAAAVGTILELT*SQLQVP
Trigger: AGGCACTTGCAGCTGGGAGCAGGTAAGTTCGAGGAT...CGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR GCA 90 bp CCACATCTCCAAGGCTTCCTCGTGAGGTCTGGAGGTGGCCTATCTGTCAAAGCAAGTGGAGGACTGGGGTaGCCCTCATCCTCCCACGCC +
Preference number: 2 (lower is better)
Translates to: PHLQGFLVRSGGGLSVKASGGLG*PSSSHA
Trigger: GGCGTGGGAGGATGAGGGGCACCCCAGTCCTCCACT...TGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR CCA 90 bp GGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGGTGTGGTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: GTGTGHISKGCSGWYGVWSGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...CCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGTGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 2 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKCPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCGGAAGTGGGCAGGCGTaGGCAGGCAGAGGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: AYTPTQAPLHRARERKAPGSGQA*AGRGSS
Trigger: GCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCC...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCGGAACTGTGCCAGGGTaGTCGCTGGCTGGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: SAALERFTTFRSDSAADSGTVPG*SLAGRG
Trigger: CCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCC...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 2 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp AGCTGCAATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATGGTGGTCCTTCTGGCTaGCGGAGGCCAAGAGGTAGT +
Preference number: 2 (lower is better)
Translates to: SCNGHMHAKGCRDGHGTHGGPSG*RRPRGS
Trigger: ACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACC...ATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATTGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCACAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCTTCCTGGCGGCCCCTaGCACAGTCTCCAGGACTGG +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKLPGGP*HSLQDW
Trigger: CCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAG...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGTCAGCAGCAGACAGCTaGCTTCCTGGCGGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKSAADS*LPGGPC
Trigger: GCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGA...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCTCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: GPENTPGCPSFFSGVAAISCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TGGTACGGGGTGTGGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAATACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: WYGVWRDEPVLPESRLPEYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...TTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GAGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGCGAGAGCTGGGAAAATaGTTCTCTCCAACCATATGC +
Preference number: 2 (lower is better)
Translates to: EHCPQPRPWRCQTHSWVWRELGK*FSPTIC
Trigger: GCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCG...CCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCACATCTCCAAGGCTTCCTCGTGAGGTCTGGAGGTGGCCTATCTGTCAAAGCATGGCGAGGCAGTGCCTaGGCTCAGCTGCAATGGCCA +
Preference number: 2 (lower is better)
Translates to: PHLQGFLVRSGGGLSVKAWRGSA*AQLQWP
Trigger: TGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCA...TGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTGTCAAAGCAGCCGGTaGGGAACATGTGGCTCCCAC +
Preference number: 2 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPCQSSR*GTCGSH
Trigger: GTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACA...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: GMQGRARDTYPRAAAVGTKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...CGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: DVESSGTESWENGSLQPYILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp TCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTGAAGTAGCTGCTTCCCACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTG +
Preference number: 2 (lower is better)
Translates to: SVKAAGGEHVAPTEVAASHHLPI*LSSRQL
Trigger: CAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTG...GGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCTCCTATGCTAGTGTaGCACGGTGGCAGAGTCTTA +
Preference number: 2 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIPPMLV*HGGRVL
Trigger: TAAGACTCTGCCACCGTGTCACACTAGCATAGGAGG...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTGGGTCGTGCTGGCTGTaGGGGAACCCTCACAATCCC +
Preference number: 2 (lower is better)
Translates to: ALERFTTFRSDSAADSCLGSCWL*GNPHNP
Trigger: GGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCC...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp TGGTACGGGGTGTGGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAATTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGC +
Preference number: 2 (lower is better)
Translates to: WYGVWRDEPVLPESRLPEFQYTC*GAPGNS
Trigger: GCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAA...TTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCGGCTACGGCATCCTTaGGGACGTTGTCATACACTC +
Preference number: 2 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPRLRHP*GRCHTL
Trigger: GAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCG...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: AYTPTQAPLHRARERKAPGMASC*LTWLSS
Trigger: AGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCC...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTGAAGTAGCTGCTTCCGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: SVKAAGGEHVAPTEVAASENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...GGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 2 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGGTGTGGACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 2 (lower is better)
Translates to: GTGTGHISKGCSGWYGVWTQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...CCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAAC +
Preference number: 2 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFSNLGT*SSRSSN
Trigger: GTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACGGAAGTGGGCAGGCGTaGGCAGGCAGAGGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHGSGQA*AGRGSS
Trigger: GCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCC...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AAGGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTACCCAGTGGTGGTCCTTCTaGCTGACGGAGGCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: KAWLLTATASLRTLSYTTQWWSF*LTEAKR
Trigger: CCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTG...GGTAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR-3UTR CCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCGTGGTGGGCCAGGTGTaGCAGTGGTGGTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: SAALERFTTFRSDSAADSVVGQV*QWWSFW
Trigger: CCAGAAGGACCACCACTGCCACACCTGGCCCACCAC...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CATCTGAAAAGGGGGACCAGCAGGATTTCAATACACGTGCTGAGGTGCTCCAGGGTGGTGGGCCAGGTGTaGCAGTGGTGGTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: HLKRGTSRISIHVLRCSRVVGQV*QWWSFW
Trigger: CCAGAAGGACCACCACTGCCACACCTGGCCCACCAC...CCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTCCCCCTTTTCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR CCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGCACTTGAGTGGGGGTaGGGGGTGTGCCGGGCACCA +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQALEWG*GVCRAP
Trigger: TGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGC...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: SAALERFTTFRSDSAADSGMASC*LTWLSS
Trigger: AGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCC...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKEGMASC*LTWLSS
Trigger: AGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCC...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGTCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: FCTLATRGRRFSEECSRVSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 2 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 2 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTGCACCTCCCAGTTCTaGTGGGTGAACAATGTGTCC +
Preference number: 2 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPCTSQF*WVNNVS
Trigger: GGACACATTGTTCACCCAGCAGAACTGGGAGGTGCA...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 2 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPTASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGGTGTGGGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTA +
Preference number: 2 (lower is better)
Translates to: GTGTGHISKGCSGWYGVWELLPP*VVIKVL
Trigger: TAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC...CCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCTGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 2 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTICPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGGTGACACCGGCTCTCTaGGGTGGTTCTCCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKVTPAL*GGSPAG
Trigger: TCCAGCAGGAGAACCACCCCAGAGAGCCGGTGTCAC...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAATCTTGCGGGGGCAGGTaGTGGGCCAGGTGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQSCGGR*WARCGS
Trigger: ACTGCCACACCTGGCCCACCACCTGCCCCCGCAAGA...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGTGCTTCCATAGGTGGTaGCGAGGCAGTGCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKCFHRW*RGSAWA
Trigger: AGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCA...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CAA 90 bp CCGGGCACCATTGCCAAGGCCTGGCTCTTGACGGCTACGGCATCCTaGAGGACGTTGTCATACACTACCAGCAGGATTTCAATACACGTG +
Preference number: 2 (lower is better)
Translates to: PGTIAKAWLLTATAS*RTLSYTTSRISIHV
Trigger: CACGTGTATTGAAATCCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR-3UTR TCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTG +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKHHLPI*LSSRQL
Trigger: CAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTG...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTG +
Preference number: 2 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACHHLPI*LSSRQL
Trigger: CAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTG...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTGGGTCGTGCTGGCTGTaGGGGAACCCTCACAATCCC +
Preference number: 2 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCGSCWL*GNPHNP
Trigger: GGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCC...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCGAGATCAAGAGCAGGTaGCGTGTTTATTGTGGGACG +
Preference number: 2 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPEIKSR*RVYCGT
Trigger: CGTCCCACAATAAACACGTCACCTGCTCTTGATCTC...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACAAACTGCCCGTGGCCTaGGGCAGGCCTCAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: GKTEVLSETPFKEEYESDKLPVA*GRPQGK
Trigger: CTTGCCTTGAGGCCTGCCTCAGGCCACGGGCAGTTT...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSGMASC*LTWLSS
Trigger: AGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCC...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHGMASC*LTWLSS
Trigger: AGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCC...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 2 (lower is better)
Translates to: GPENTPGCPSFFSGVAAIRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: FCTLATRGRRFSEECSRVENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCGCTTGTGCTCACCAATaGCTTCCCATCCCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: SAALERFTTFRSDSAADSACAHQ*LPIPWH
Trigger: GTGCCAGGGGATGGGAAGGCATTGGTGAGCACAAGC...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: KANTQAYTPTQAPLHRAREKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPSGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 2 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPTQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCACATCTCCAAGGCTTCCTCGTGAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGTGAGGGTGAAGTTCTaGCTGCTCAGGATCCTCGTG +
Preference number: 2 (lower is better)
Translates to: PHLQGFLVRSGGGLSVKAVRVKF*LLRILV
Trigger: CACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC...TGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTCACAGGTCCAATTCTTaGATCTCTCCGCTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLHRSNS*ISPLSS
Trigger: GGAGGAAAGCGGAGAGATCCAAGAATTGGACCTGTG...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR CAA 90 bp AAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGATCCTCGAACTTACCTGCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: KFWLLRILVLFICSN*GTWSSRSSNLPAPS
Trigger: GCTGGGAGCAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 90 bp GGTGAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACC +
Preference number: 2 (lower is better)
Translates to: GEGEVLAAQDPRAVY*LQLGDVVFPILELT
Trigger: GGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643539.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAAGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 2 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: AAPATVSRTGKGLRNPRQGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...CTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCCGGCTACGGCATCCTTaGGGACGTTGTCATACACTA +
Preference number: 2 (lower is better)
Translates to: AYTPTQAPLHRARERKAPRLRHP*GRCHTL
Trigger: TAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCG...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR-3UTR GCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAAGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 2 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 2 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTGCTGAGATTTTCAGCTaGTCTGGAAAGATTCACCAC +
Preference number: 2 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGAEIFS*SGKIHH
Trigger: GTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATCCAGACTCTGGAAACTaGCCGTGGCCTGAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNPDSGN*PWPEAG
Trigger: GCCTGCCTCAGGCCACGGGCAGTTTCCAGAGTCTGG...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCCGATGTCCCCCTCCATaGTGGTTCTCTGTCACAGGT +
Preference number: 2 (lower is better)
Translates to: SAALERFTTFRSDSAADSRCPPP*WFSVTG
Trigger: ACCTGTGACAGAGAACCAGCATGGAGGGGGACATCG...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR CCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCTCGCTTGCCTATCAATaGTGGTATCAAACGCCCATG +
Preference number: 2 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPSLAYQ*WYQTPM
Trigger: CATGGGCGTTTGATACCACCATTGATAGGCAAGCGA...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCTCCTAGAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTTGAAAACCTCGTGAGGGTGAAGTTCTaGCTGCTCAGGATCCTCGTG +
Preference number: 2 (lower is better)
Translates to: PPREGSRSFCSLLRLENLVRVKF*LLRILV
Trigger: CACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC...GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTCTAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATGGAAGTGGGCAGGCGTaGGCAGGCAGAGGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNGSGQA*AGRGSS
Trigger: GCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCC...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCAGGTGTGGCAGTGGTaGTCCTTCTGGCTGACGGAG +
Preference number: 2 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHQVWQW*SFWLTE
Trigger: CTCCGTCAGCCAGAAGGACCACCACTGCCACACCTG...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAAAGGGCTGCAGCGGTTaGTACGGGGTGTGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQKGCSG*YGVWRD
Trigger: ATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTT...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGTCCCCCTCCATGCTaGTTCTCTGTCACAGGTCCA +
Preference number: 2 (lower is better)
Translates to: SAALERFTTFRSDSAADSCPPPC*FSVTGP
Trigger: TGGACCTGTGACAGAGAACCAGCATGGAGGGGGACA...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR CAA 90 bp CCCCTCCTAGAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTaGAAAACCTCTGAATTTAACCTGATGCCAGCCCTGGGAGGAACT +
Preference number: 2 (lower is better)
Translates to: PLLEKAPGHSAACSG*KTSEFNLMPALGGT
Trigger: AGTTCCTCCCAGGGCTGGCATCAGGTTAAATTCAGAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTCTAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CAA 90 bp ACTGGACAGTGTGTGCCTACTGGGAATGGCTCTGTCCTGTTTGCCTaGCTCCCTGCAGTAACTATGGGGCACATTTACCTCCAGTGTCAG +
Preference number: 2 (lower is better)
Translates to: TGQCVPTGNGSVLFA*LPAVTMGHIYLQCQ
Trigger: CTGACACTGGAGGTAAATGTGCCCCATAGTTACTGCAGGGAGCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACACTGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 90 bp GGTGAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACT +
Preference number: 2 (lower is better)
Translates to: GEGEVLAAQDPRAVY*LQLGDVVFPILELT
Trigger: AGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR TCA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTGGAATCTTATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: WVVIKVLVVNTASKTWNLILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...AAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCCTCCTATGCTAGTGTaGCACGGTGGCAGAGTCTTA +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKPPMLV*HGGRVL
Trigger: TAAGACTCTGCCACCGTGTCACACTAGCATAGGAGG...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAACAGATACAAGAACTTaGATCCAAACTGCTTGCACA +
Preference number: 2 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPTDTRT*IQTACT
Trigger: TGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGT...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATCACCAGGGCTGATTTaGGAGAGGGAAGGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: TRGRRFSEECSRVRYVIESPGLI*EREGGA
Trigger: GGCCCCTCCTTCCCTCTCTCAAATCAGCCCTGGTGA...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: TRGRRFSEECSRVRYVIESGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAATCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: EVWRWPICQSSRWGTCGSAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...GGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCAGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 2 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTAGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 2 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 2 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWASSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 2 (lower is better)
Translates to: FCTLATRGRRFSEECSRVSSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: SAALERFTTFRSDSAADSYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCTGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 2 (lower is better)
Translates to: AYTPTQAPLHRARERKAPCPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 2 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLTQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATATCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAAC +
Preference number: 2 (lower is better)
Translates to: THQLRPLCIEPGKEKHPISNLGT*SSRSSN
Trigger: GTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAACAGTGGTGGTCCTTCTaGCTGACGGAGGCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKQWWSF*LTEAKR
Trigger: CCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTG...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTTCTTGCGGGGGCAGGTaGTGGGCCAGGTGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCSCGGR*WARCGS
Trigger: ACTGCCACACCTGGCCCACCACCTGCCCCCGCAAGA...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAGGATACGCAGTGCCTaGCAGGTGGAAGGGGAACTG +
Preference number: 2 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHRIRSA*QVEGEL
Trigger: CAGTTCCCCTTCCACCTGCCAGGCACTGCGTATCCT...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGCCGGGTAGGCTGGTaGCTGGAACAGCACTTGAGT +
Preference number: 2 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLGRVGW*LEQHLS
Trigger: ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCC...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTFRSGE*ARKVGS
Trigger: GCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAA...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR CAA 90 bp AAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: KLCGYLRVHHKLGSN*GSKLTALMWDRQCG
Trigger: GCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CAA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCC +
Preference number: 2 (lower is better)
Translates to: VFLRALSLQIPKYWL*IQPVACLSMVVSNA
Trigger: GGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CAA 90 bp AAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGATCCTCGAACTTACTTGCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: KFWLLRILVLFICSN*GTWSSRSSNLLASR
Trigger: CCTGCTTGCAAGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR TCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 2 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTTTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCLQESS*GPSRCR
Trigger: TCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAA...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCAACCAAAGAACATGCTaGGCACAAGCTGCGAGTCAG +
Preference number: 2 (lower is better)
Translates to: SAALERFTTFRSDSAADSNQRTC*AQAASQ
Trigger: CTGACTCGCAGCTTGTGCTCAGCATGTTCTTTGGTT...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAACCCAGTTCTGCTGGGTaGACAATGTGTCCCCCAACC +
Preference number: 2 (lower is better)
Translates to: TRGRRFSEECSRVRYVIEPSSAG*TMCPPT
Trigger: GGTTGGGGGACACATTGTTCACCCAGCAGAACTGGG...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCAAAAACAACAACAAATaGACGTGCAGCCTCCTATGC +
Preference number: 2 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPKNNNK*TCSLLC
Trigger: GCATAGGAGGCTGCACGTTCATTTGTTGTTGTTTTT...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGGGGTCGTGCTGGCTGTaGGGGAACCCTCACAATCCC +
Preference number: 2 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKGSCWL*GNPHNP
Trigger: GGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCC...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp AATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAAAATGGGCATACTCCTTaGGGCACTCTTTGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: NGHMHAKGCRDGHGTHIQNGHTP*GTLWSC
Trigger: GCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATT...TTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 2 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ATGGGAGTGCCCAAGGGTGGAAGAAATACAAGTGGATCCCTCTGGCTGAAGGCCTCCAGCCTGCTGACATaGCCCACAAATTTTAGACCA +
Preference number: 2 (lower is better)
Translates to: MGVPKGGRNTSGSLWLKASSLLT*PTNFRP
Trigger: TGGTCTAAAATTTGTGGGGCATGTCAGCAGGCTGGA...GGCCTTCAGCCAGAGGGATCCACTTGTATTTCTTCCACCCTTGGGCACTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR GCA 90 bp ATGGGAGTGCCCAAGGGTGGAAGAAATACAAGTGGATCCCTCTGGCTGAAGGCCGGAGGTCAGCTCATTTaGTCCCATTTGAACCATGCT +
Preference number: 2 (lower is better)
Translates to: MGVPKGGRNTSGSLWLKAGGQLI*SHLNHA
Trigger: AGCATGGTTCAAATGGGAGCAAATGAGCTGACCTCC...GGCCTTCAGCCAGAGGGATCCACTTGTATTTCTTCCACCCTTGGGCACTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR GCA 90 bp CCACATCTCCAAGGCTTCCTCGTGAGGTCTGGAGGTGGCCTATCTGTCAAAGCAAGTTCCCATCTCTCATaGTGCTTAGGGGAGATAAGG +
Preference number: 2 (lower is better)
Translates to: PHLQGFLVRSGGGLSVKASSHLS*CLGEIR
Trigger: CCTTATCTCCCCTAAGCAGCATGAGAGATGGGAACT...TGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTTCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: TTNERAASYASVTRWQSLSCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTTCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCSCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAATACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: TQAYTPTQAPLHRARERKYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: AYTPTQAPLHRARERKAPGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 2 (lower is better)
Translates to: AYTPTQAPLHRARERKAPKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTTCGCTTGCCTATCAATaGTGGTATCAAACGCCCATG +
Preference number: 2 (lower is better)
Translates to: PCHSLQDWQGAKESKTGISLAYQ*WYQTPM
Trigger: CATGGGCGTTTGATACCACCATTGATAGGCAAGCGA...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 2 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTCACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 2 (lower is better)
Translates to: TTNERAASYASVTRWQSLHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATTATACACCCCTCCGCTaGCCTCTGTGTGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNYTPLR*PLCAQG
Trigger: TCCCTGGGCACACAGAGGCCAGCGGAGGGGTGTATA...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGTATACACCCCTCCGCTaGCCTCTGTGTGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWYTPLR*PLCAQG
Trigger: TCCCTGGGCACACAGAGGCCAGCGGAGGGGTGTATA...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTGTGAGGGTGAAGTTCTaGCTGCTCAGGATCCTCGTG +
Preference number: 2 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCVRVKF*LLRILV
Trigger: CACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACACAGTGGTGGTCCTTCTaGCTGACGGAGGCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTQWWSF*LTEAKR
Trigger: CCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTG...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACCAGGTGTGGCAGTGGTaGTCCTTCTGGCTGACGGAG +
Preference number: 2 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNQVWQW*SFWLTE
Trigger: CTCCGTCAGCCAGAAGGACCACCACTGCCACACCTG...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGAGGCTCCCTGAACGGTaGGCCTGCAAGGAGTCCCGA +
Preference number: 2 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKRLPER*ACKESR
Trigger: TCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCT...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATAGCTGCTTCCATAGGTaGTGGCGAGGCAGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNSCFHR*WRGSAW
Trigger: CCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCT...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CAA 90 bp TTGTCCAAAGTGAGGTGGGTGCTCTTGGTCAACCCAAGACTTGCCTaGTCTCTGAATCCCCAAAACTTAGAGCTTCCTGCCTCACCTAGC +
Preference number: 2 (lower is better)
Translates to: LSKVRWVLLVNPRLA*SLNPQNLELPASPS
Trigger: GCTAGGTGAGGCAGGAAGCTCTAAGTTTTGGGGATTCAGAGACAAGGCAAGTCTTGGGTTGACCAAGAGCACCCACCTCACTTTGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CAA 90 bp AAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGATCCTCGAACTTACCAGTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: KFWLLRILVLFICSN*GTWSSRSSNLPVRN
Trigger: GTTTCTCACTGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR-3UTR TCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: FCTLATRGRRFSEECSRVKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGCCCAGTTCTGCTGGGTaGACAATGTGTCCCCCAACC +
Preference number: 2 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAPSSAG*TMCPPT
Trigger: GGTTGGGGGACACATTGTTCACCCAGCAGAACTGGG...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATCCCAGTTCTGCTGGGTaGACAATGTGTCCCCCAACC +
Preference number: 2 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNPSSAG*TMCPPT
Trigger: GGTTGGGGGACACATTGTTCACCCAGCAGAACTGGG...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp TCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTGAAGTAGCTGCTTCCAAAAACAACAACAAATaGACGTGCAGCCTCCTATGC +
Preference number: 2 (lower is better)
Translates to: SVKAAGGEHVAPTEVAASKNNNK*TCSLLC
Trigger: GCATAGGAGGCTGCACGTTCATTTGTTGTTGTTTTT...GGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCACAGATACAAGAACTTaGATCCAAACTGCTTGCACA +
Preference number: 2 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPTDTRT*IQTACT
Trigger: TGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGT...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGAAAACCCTGAGACGGTaGTGGAGCTGGGGTGTCAAG +
Preference number: 2 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLKTLRR*WSWGVK
Trigger: CTTGACACCCCAGCTCCATCACCGTCTCAGGGTTTT...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR TCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTGTGATCTTGCAGGGTaGCCTCTAGGAAGTAATGGG +
Preference number: 2 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHCDLAG*PLGSNG
Trigger: CCCATTACTTCCTAGAGGTCACCCTGCAAGATCACA...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGTGTGATCTTGCAGGGTaGCCTCTAGGAAGTAATGGG +
Preference number: 2 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKCDLAG*PLGSNG
Trigger: CCCATTACTTCCTAGAGGTCACCCTGCAAGATCACA...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGTCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 2 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCCAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: STLLSFAISHTQSLDWVKASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACTGCTAACACAGAAATCATGCCTGAGTTTCCAGCCTGTGGGCCTGCCCTACAGGGTCATTCTGCAGCTTaGTCAGGCTTGAAAACCTCT +
Preference number: 2 (lower is better)
Translates to: TANTEIMPEFPACGPALQGHSAA*SGLKTS
Trigger: AGAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACC...CTGTAGGGCAGGCCCACAGGCTGGAAACTCAGGCATGATTTCTGTGTTAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR GCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGG +
Preference number: 2 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGLVLFI*SNLGTW
Trigger: CCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAG...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTAGGACAAGAGGTGAGAGATCAAGAGCAGGTGACGTGTTTATTGTGGGACGCCAGCCCGCTTCTCCCTTaGTGCCTGACTTTAAAGATG +
Preference number: 2 (lower is better)
Translates to: LGQEVRDQEQVTCLLWDASPLLP*CLTLKM
Trigger: CATCTTTAAAGTCAGGCAGCAAGGGAGAAGCGGGCT...GGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCACCTCTTGTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGCCAAGCATAGGTCCTaGACGGGGGTCTGGAACTGT +
Preference number: 2 (lower is better)
Translates to: STLLSFAISHTQSLDWVKAKHRS*TGVWNC
Trigger: ACAGTTCCAGACCCCCGTGCAGGACCTATGCTTGGC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTTCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKASCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: RGRRFSEECSRVRYVIECSCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACTGCTAACACAGAAATCATGCCTGAGTTTCCAGCCTGTGGGCCTGCCCTACAGAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 2 (lower is better)
Translates to: TANTEIMPEFPACGPALQKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...CTGTAGGGCAGGCCCACAGGCTGGAAACTCAGGCATGATTTCTGTGTTAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATATCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: THQLRPLCIEPGKEKHPISGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 2 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCTASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTTCGCTTGCCTATCAATaGTGGTATCAAACGCCCATG +
Preference number: 2 (lower is better)
Translates to: ALERFTTFRSDSAADSCLSLAYQ*WYQTPM
Trigger: CATGGGCGTTTGATACCACCATTGATAGGCAAGCGA...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGCACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 2 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTGCTAGTGTGACACGGTaGCAGAGTCTTATCCACACC +
Preference number: 2 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPASVTR*QSLIHT
Trigger: GGTGTGGATAAGACTCTGCCACCGTGTCACACTAGC...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAATTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGAT +
Preference number: 2 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKELFAPT*GRGLPD
Trigger: ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAA...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGACCATTGCCAAGGCCTaGCTCTTGACGGCTACGGCA +
Preference number: 2 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWTIAKA*LLTATA
Trigger: TGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGT...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CAA 90 bp TCCATAGTAACAGATGGAGAAATGGAAGCCCAAAGAGGGAGGGATTaGTCCAAAGTGAGGTGGGTGCTCTTGGTCAACCCAAGACTTGCC +
Preference number: 2 (lower is better)
Translates to: SIVTDGEMEAQRGRD*SKVRWVLLVNPRLA
Trigger: GGCAAGTCTTGGGTTGACCAAGAGCACCCACCTCACTTTGGACAAATCCCTCCCTCTTTGGGCTTCCATTTCTCCATCTGTTACTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR TCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTTCACCAGGGCTGATTTaGGAGAGGGAAGGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVSPGLI*EREGGA
Trigger: GGCCCCTCCTTCCCTCTCTCAAATCAGCCCTGGTGA...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR TCA 90 bp CCTCCTAGAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTTGAAAACCTCGAATTTCCAGCCTGCTaGCATGCCCCACAAATTTTA +
Preference number: 2 (lower is better)
Translates to: PPREGSRSFCSLLRLENLEFPAC*HAPQIL
Trigger: TAAAATTTGTGGGGCATGTCAGCAGGCTGGAAATTC...GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTCTAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR TCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGATACAACACATTCCTaGGGACGGCTCAAAAGACGT +
Preference number: 2 (lower is better)
Translates to: TQAYTPTQAPLHRARERKDTTHS*GRLKRR
Trigger: ACGTCTTTTGAGCCGTCCTCAGGAATGTGTTGTATC...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR TCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTTTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGC +
Preference number: 2 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCFQYTC*GAPGNS
Trigger: GCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAA...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGTCTTCTCTGACACACTaGACATTTCCTCCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKSSLTH*TFPPQD
Trigger: ATCTTGGGGAGGAAATGTTCAGTGTGTCAGAGAAGA...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR TCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGACATGTGGCTCCCACTaGAGTAGCTGCTTCCATAGG +
Preference number: 2 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLTCGSH*SSCFHR
Trigger: CCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGT...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACCGTTGTAGCGATCCATaGAGTGGTCCAGCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYRCSDP*SGPAGR
Trigger: TCTACCTGCTGGACCACTTCATGGATCGCTACAACG...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR GCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCACAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 2 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCAGCAACTTGAATCCAAACTaGTTGCACATAAATAGAACG +
Preference number: 2 (lower is better)
Translates to: PENTPGCPSFFSGVAAISNLNPN*LHINRT
Trigger: CGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTT...GCTGATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCACTAACACAGAAATCATaGCTGAGTTTCCAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPLTQKS*LSFQPV
Trigger: CACAGGCTGGAAACTCAGGCATGATTTCTGTGTTAG...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAGTAACCACCACAGGCTaGTCCACAGTAGATACAACA +
Preference number: 2 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIVTTTG*STVDTT
Trigger: TGTTGTATCTACTGTGGAGCAGCCTGTGGTGGTTAC...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: STLLSFAISHTQSLDWVKEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACAGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATTTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: DVESSGTESWENGSLQPYLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAATTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: TQAYTPTQAPLHRARERKGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: TTNERAASYASVTRWQSLSGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAATGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQCPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 2 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWATQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGCAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 2 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCCAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 2 (lower is better)
Translates to: AYTPTQAPLHRARERKAPQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATACCTCCCAGTTCTGCTaGGTGAACAATGTGTCCCCC +
Preference number: 2 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNTSQFC*VNNVSP
Trigger: GGGGGACACATTGTTCACCCAGCAGAACTGGGAGGT...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGCACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCAGCTAGTGTGACACGGTaGCAGAGTCTTATCCACACC +
Preference number: 2 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSASVTR*QSLIHT
Trigger: GGTGTGGATAAGACTCTGCCACCGTGTCACACTAGC...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACAAAGCCTCCATAATGTaGGTGGGCCTCATCCAACTG +
Preference number: 2 (lower is better)
Translates to: GKTEVLSETPFKEEYESDKASIM*VGLIQL
Trigger: CAGTTGGATGAGGCCCACCCACATTATGGAGGCTTT...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CCA 90 bp AGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTCCATTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGAT +
Preference number: 2 (lower is better)
Translates to: SSVVTCGSITSWVQTWVPLFAPT*GRGLPD
Trigger: ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAA...TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATCCTCTGCAGGTCTCTaGTCCAGTAGGGAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: TRGRRFSEECSRVRYVIESSAGL*SSREKA
Trigger: AGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGA...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATTACCAGGAGTCACCATaGCCCACTTTCCCTGAGACC +
Preference number: 2 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNYQESP*PTFPET
Trigger: GGTCTCAGGGAAAGTGGGCCATGGTGACTCCTGGTA...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 90 bp CCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGAC +
Preference number: 2 (lower is better)
Translates to: PSKRKLCGYLRVHHK*GSNLGSKLTALMWD
Trigger: GTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp CATCTGAAAAGGGGGACCAGCAGGATTTCAATACACGTGCTGAGGTGCTCCAGGGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: HLKRGTSRISIHVLRCSRGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...CCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTCCCCCTTTTCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR TCA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTCACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTG +
Preference number: 2 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVHHLPI*LSSRQL
Trigger: CAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTG...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAATCCCATTTTAACAGGTaGCAAGATGGAGGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQSHFNR*QDGGSE
Trigger: CTCTGAGCCTCCATCTTGTCACCTGTTAAAATGGGA...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR TCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCATGTGATCTTGCAGGGTaGCCTCTAGGAAGTAATGGG +
Preference number: 2 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSCDLAG*PLGSNG
Trigger: CCCATTACTTCCTAGAGGTCACCCTGCAAGATCACA...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGCCTGAATGAGCCCAATCTCTGCTTTCCAGGCAATTCTGGGCCAGCTCCATCCTTTAAGTATCTTCTCTaGCACACTGAACATTTCCTC +
Preference number: 2 (lower is better)
Translates to: GLNEPNLCFPGNSGPAPSFKYLL*HTEHFL
Trigger: GAGGAAATGTTCAGTGTGTCAGAGAAGATACTTAAA...GGATGGAGCTGGCCCAGAATTGCCTGGAAAGCAGAGATTGGGCTCATTCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR GCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 2 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQSSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 2 (lower is better)
Translates to: RVFLRALSLQIPKYWLLITGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 2 (lower is better)
Translates to: TQAYTPTQAPLHRARERKTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 2 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 2 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATTGCACCTCCCAGTTCTaGTGGGTGAACAATGTGTCC +
Preference number: 2 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNCTSQF*WVNNVS
Trigger: GGACACATTGTTCACCCAGCAGAACTGGGAGGTGCA...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTTCCAGCCTGCTGACATaGCCCACAAATTTTAGACCA +
Preference number: 2 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCSSLLT*PTNFRP
Trigger: TGGTCTAAAATTTGTGGGGCATGTCAGCAGGCTGGA...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR GCA 90 bp GCTACGGCATCCTTGAGGACGTTGTCATACACTACCAGCAGGATTTCAATACACCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGG +
Preference number: 2 (lower is better)
Translates to: ATASLRTLSYTTSRISIHLVLFI*SNLGTW
Trigger: CCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAG...GTGTATTGAAATCCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGCCGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR-3UTR GCA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCTGCTCAGGATCCTCGTaGTGTTTATTTGCTCCAACT +
Preference number: 2 (lower is better)
Translates to: RVFLRALSLQIPKYWLLICSGSS*CLFAPT
Trigger: AGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 2 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: TRGRRFSEECSRVRYVIELTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAATTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 2 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQTASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGTGTGGTGGAGAGAGGTaGGAACTGTTTAAATCTTTG +
Preference number: 2 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKCGGER*ELFKSL
Trigger: CAAAGATTTAAACAGTTCCCACCTCTCTCCACCACA...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 2 (lower is better)
Translates to: TRGRRFSEECSRVRYVIECPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 2 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHTQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCACCTCCCAGTTCTGCTaGGTGAACAATGTGTCCCCC +
Preference number: 2 (lower is better)
Translates to: CVNKTSYETESKTTSGSSTSQFC*VNNVSP
Trigger: GGGGGACACATTGTTCACCCAGCAGAACTGGGAGGT...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGAT +
Preference number: 2 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLLFAPT*GRGLPD
Trigger: ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAA...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGCAAAATAGGAAGAACTaGTTCTCGAAACCCCACTTC +
Preference number: 2 (lower is better)
Translates to: FCTLATRGRRFSEECSRVQNRKN*FSKPHF
Trigger: GAAGTGGGGTTTCGAGAACCAGTTCTTCCTATTTTG...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR TCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTTTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVLQESS*GPSRCR
Trigger: TCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAA...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTCCTATGCTAGTGTaGCACGGTGGCAGAGTCTTA +
Preference number: 2 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKPPMLV*HGGRVL
Trigger: TAAGACTCTGCCACCGTGTCACACTAGCATAGGAGG...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCATCCCATTTTAACAGGTaGCAAGATGGAGGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSSHFNR*QDGGSE
Trigger: CTCTGAGCCTCCATCTTGTCACCTGTTAAAATGGGA...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR TCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGAATGGGCATACTCCTTaGGGCACTCTTTGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQNGHTP*GTLWSC
Trigger: GCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATT...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 2 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 2 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: RVFLRALSLQIPKYWLLIAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTCAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: RPLREAAAHDISKRLKMVQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTCAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 2 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKSSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 2 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 2 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 2 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAATGCTCAGGATCCTCGTaGTGTTTATTTGCTCCAACT +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQCSGSS*CLFAPT
Trigger: AGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGAGCCAAGCATAGGTCCTaGACGGGGGTCTGGAACTGT +
Preference number: 2 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGAKHRS*TGVWNC
Trigger: ACAGTTCCAGACCCCCGTGCAGGACCTATGCTTGGC...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACTTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQSGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 2 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCTASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 2 (lower is better)
Translates to: CVNKTSYETESKTTSGSSTASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTGTGGTGGAGAGAGGTaGGAACTGTTTAAATCTTTG +
Preference number: 2 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHCGGER*ELFKSL
Trigger: CAAAGATTTAAACAGTTCCCACCTCTCTCCACCACA...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACGATTTTCAGCTGCTCTaGAAAGATTCACCACCTTCC +
Preference number: 2 (lower is better)
Translates to: GKTEVLSETPFKEEYESDDFQLL*KDSPPS
Trigger: GGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATC...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGATTTTCAGCTGCTCTaGAAAGATTCACCACCTTCC +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQDFQLL*KDSPPS
Trigger: GGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATC...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTGGAATCTTTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAAC +
Preference number: 2 (lower is better)
Translates to: WVVIKVLVVNTASKTWNLSNLGT*SSRSSN
Trigger: GTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA...AAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTTCCTCTGCAGGTCTCTaGTCCAGTAGGGAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: RPLREAAAHDISKRLKMVSSAGL*SSREKA
Trigger: AGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGA...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTCGTTGTCATACACTCTaGCTTCCAGGAGGATGGCGC +
Preference number: 2 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVRCHTL*LPGGWR
Trigger: GCGCCATCCTCCTGGAAGCCAGAGTGTATGACAACG...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: TTNERAASYASVTRWQSLGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGCTAAATACTGGCTTTTaGTCCAACCAGTCGCTTGCC +
Preference number: 2 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWLNTGF*SNQSLA
Trigger: GGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAG...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGATTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGLQESS*GPSRCR
Trigger: TCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAA...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGAACCAAAGAACATGCTaGGCACAAGCTGCGAGTCAG +
Preference number: 2 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKNQRTC*AQAASQ
Trigger: CTGACTCGCAGCTTGTGCTCAGCATGTTCTTTGGTT...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTCTAGGATTTTTCATCTaGAAAGGGGGACCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGLGFFI*KGGPAG
Trigger: TCCTGCTGGTCCCCCTTTTCAGATGAAAAATCCTAG...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR GCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 2 (lower is better)
Translates to: NGSLQPYAFKKEALWLPARFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: TTNERAASYASVTRWQSLAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 2 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 2 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 2 (lower is better)
Translates to: GKTEVLSETPFKEEYESDANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: STLLSFAISHTQSLDWVKGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTCGAGAGCTGGGAAAATaGTTCTCTCCAACCATATGC +
Preference number: 2 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGRELGK*FSPTIC
Trigger: GCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCG...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCCTAAATACTGGCTTTTaGTCCAACCAGTCGCTTGCC +
Preference number: 2 (lower is better)
Translates to: CVNKTSYETESKTTSGSSLNTGF*SNQSLA
Trigger: GGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAG...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAACAGATACAAGAACTTaGATCCAAACTGCTTGCACA +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQTDTRT*IQTACT
Trigger: TGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGT...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 2 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKAAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 2 (lower is better)
Translates to: STLLSFAISHTQSLDWVKTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCAGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 2 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGCTGAGATTTTCAGCTaGTCTGGAAAGATTCACCAC +
Preference number: 2 (lower is better)
Translates to: STLLSFAISHTQSLDWVKAEIFS*SGKIHH
Trigger: GTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCAACTTGAATCCAAACTaGTTGCACATAAATAGAACG +
Preference number: 2 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACNLNPN*LHINRT
Trigger: CGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTT...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGATTTTGAACTCTACTaGAACATCAGCTCTTACCTG +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQDFELY*NISSYL
Trigger: CAGGTAAGAGCTGATGTTGCAGTAGAGTTCAAAATC...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR GCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGATGGCTCTGTCCTGTTTaGCTTGCTCCCTGCAGTAAC +
Preference number: 2 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGWLCPV*LAPCSN
Trigger: GTTACTGCAGGGAGCAAGGCAAACAGGACAGAGCCA...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCTTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 2 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTAGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: CSRVRYVIECFALGQFYLEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 2 (lower is better)
Translates to: CVNKTSYETESKTTSGSSKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 2 (lower is better)
Translates to: EECSRVRYVIECFALGQFKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTCGAGAGCTGGGAAAATaGTTCTCTCCAACCATATGC +
Preference number: 2 (lower is better)
Translates to: EECSRVRYVIECFALGQFRELGK*FSPTIC
Trigger: GCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCG...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATCAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 2 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CCTCCTAGAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTTGAAAACCTCCCATATATATCCTACTaGTTTCTTTGGAAAAACCCT +
Preference number: 2 (lower is better)
Translates to: PPREGSRSFCSLLRLENLPYISY*FLWKNP
Trigger: AGGGTTTTTCCAAAGAAACCAGTAGGATATATATGG...GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTCTAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR TCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGAAAAACAACAACAAATaGACGTGCAGCCTCCTATGC +
Preference number: 2 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWKNNNK*TCSLLC
Trigger: GCATAGGAGGCTGCACGTTCATTTGTTGTTGTTTTT...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTACAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: CSRVRYVIECFALGQFYLQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCAC +
Preference number: 2 (lower is better)
Translates to: MLEISGLCPVPTLLASYQKQNKN*FHGPLH
Trigger: GTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTT...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTGCTGAGATTTTCAGCTaGTCTGGAAAGATTCACCAC +
Preference number: 2 (lower is better)
Translates to: EECSRVRYVIECFALGQFAEIFS*SGKIHH
Trigger: GTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTA +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQELLPP*VVIKVL
Trigger: TAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTA +
Preference number: 2 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNELLPP*VVIKVL
Trigger: TAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTA +
Preference number: 2 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWELLPP*VVIKVL
Trigger: TAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGTGTGGTGGAGAGAGGTaGGAACTGTTTAAATCTTTG +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQCGGER*ELFKSL
Trigger: CAAAGATTTAAACAGTTCCCACCTCTCTCCACCACA...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGATGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 2 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGCPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGACAGATACAAGAACTTaGATCCAAACTGCTTGCACA +
Preference number: 2 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQTDTRT*IQTACT
Trigger: TGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGT...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 2 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR GCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTTGCTCAGGATCCTCGTaGTGTTTATTTGCTCCAACT +
Preference number: 2 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVCSGSS*CLFAPT
Trigger: AGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 2 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGACGAGAGCTGGGAAAATaGTTCTCTCCAACCATATGC +
Preference number: 2 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGRELGK*FSPTIC
Trigger: GCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCG...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR TCA 90 bp GCCTTGATGTACATTATGTTATTTAATCCTCTTAAGAACCCTATGAGGCAAGGTTTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGC +
Preference number: 2 (lower is better)
Translates to: ALMYIMLFNPLKNPMRQGFQYTC*GAPGNS
Trigger: GCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAA...ACCTTGCCTCATAGGGTTCTTAAGAGGATTAAATAACATAATGTACATCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR GCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCAC +
Preference number: 2 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNKQNKN*FHGPLH
Trigger: GTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTT...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAAAAGATTGAGGTTTCCTaGAGAATAAATTTTGCCTCA +
Preference number: 2 (lower is better)
Translates to: TRGRRFSEECSRVRYVIEKIEVS*RINFAS
Trigger: TGAGGCAAAATTTATTCTCCAGGAAACCTCAATCTT...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAACTTAGGGGAGCTTACTaGCTAAGAGGTCAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKLRGAY*LRGQLC
Trigger: ACAAAGCTGACCTCTTAGCCAGTAAGCTCCCCTAAG...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR GCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCAC +
Preference number: 2 (lower is better)
Translates to: EECSRVRYVIECFALGQFKQNKN*FHGPLH
Trigger: GTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTT...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 2 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGCCATATATATCCTACTaGTTTCTTTGGAAAAACCCT +
Preference number: 2 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWPYISY*FLWKNP
Trigger: AGGGTTTTTCCAAAGAAACCAGTAGGATATATATGG...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR GCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTATTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 2 (lower is better)
Translates to: CSRVRYVIECFALGQFYLFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAATTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 2 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTATTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 2 (lower is better)
Translates to: CSRVRYVIECFALGQFYLFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR TCA 72 bp CTTCCTGCCTCACCTAGCCTTGCACACAGCGGGTGGTaGGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCA +
Preference number: 3 (lower is better)
Translates to: LPASPSLAHSGW*ALPSAPPLAVS
Trigger: TGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTCACCACCCGCTGTGTGCAAGGCTAGGTGAGGCAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR GCA 72 bp CCTCACCTAGCCTTGCACACAGCGGGTGGTGAGCACTaGCCTCAGCCCCGCCCTTGGCGGTGTCAAACACAC +
Preference number: 3 (lower is better)
Translates to: PHLALHTAGGEH*PQPRPWRCQTH
Trigger: GTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTCACCACCCGCTGTGTGCAAGGCTAGGTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR GCA 72 bp GATGCAGGGACGGGCACGGGACACATATCCAAGGGCTaGAGCGGTTGGTACGGGGTGTGGAGGGATGAGCCT +
Preference number: 3 (lower is better)
Translates to: DAGTGTGHISKG*SGWYGVWRDEP
Trigger: AGGCTCATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CCA 72 bp ACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTaGTACGGGGTGTGGAGGGATGAGCCTGTACTCCCC +
Preference number: 3 (lower is better)
Translates to: TGTGHISKGCSG*YGVWRDEPVLP
Trigger: GGGGAGTACAGGCTCATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTAGGCACTCTTTGGTCTaGCGGGGGCAGGTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: PRLFRDGLLLPHLAELSSRHSLV*RGQVVG
Trigger: GCCCACCACCTGCCCCCGCAAGACCAAAGAGTGCCT...AGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR TCA 72 bp TGGTGGGCCAGGTGTGGCAGTGGTGGTCCTTCTGGCTaGCGGAGGCCAAGAGGTAGTAGTCCAGGAAGTGGG +
Preference number: 3 (lower is better)
Translates to: WWARCGSGGPSG*RRPRGSSPGSG
Trigger: CCCACTTCCTGGACTACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTGCCACACCTGGCCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR GCA 72 bp ATGGGATCCTCCGGGGGTCCTGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGTGTAGCTGCCATCAGC +
Preference number: 3 (lower is better)
Translates to: MGSSGGPENTPG*PSFFSGVAAIS
Trigger: GCTGATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGATCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR GCA 72 bp GCTTCCAGGAGGATGGCGCCTGCTTGTGCTCACCAATaGCTTCCCATCCCCTGGCACTGGAGTGTTCCTGGG +
Preference number: 3 (lower is better)
Translates to: ASRRMAPACAHQ*LPIPWHWSVPG
Trigger: CCCAGGAACACTCCAGTGCCAGGGGATGGGAAGGCATTGGTGAGCACAAGCAGGCGCCATCCTCCTGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
3UTR CCA 72 bp CACATATCCAAGGGCTGCAGCGGTTGGTACGGGGTGTaGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: HISKGCSGWYGV*RDEPVLPESRL
Trigger: GAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CCA 72 bp TCCACGAAGAACCGGCGGCTCTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGCTTCAGTTCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: STKNRRLFRSGE*ARKVGSFSSFW
Trigger: CCAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR CCA 72 bp CAGGATGTCCACGAAGAACCGGCGGCTCTTCAGGAGTaGGGAGTGGGCTCGGAAGGTGGGCAGCTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: QDVHEEPAALQE*GVGSEGGQLQF
Trigger: GAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR CAA 90 bp GCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGCTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: AAPATVSRTGKGLRNPRQLLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...CTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp CCTCTGCCCACATCTCCAAGGCTTCCTCGTGAGGTCTaGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: PLPTSPRLPREV*RWPICQSSRWG
Trigger: TCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGGGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: GMQGRARDTYPRAAAVGTRVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...CGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGGTGTGGGATCCAACCAGTCGCTaGCCTATCAATGGTGGTATC +
Preference number: 3 (lower is better)
Translates to: GTGTGHISKGCSGWYGVWDPTSR*PINGGI
Trigger: GATACCACCATTGATAGGCAAGCGACTGGTTGGATC...CCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR TCA 72 bp CCATCCCCTGGCACTGGAGTGTTCCTGGGGCCTGAATaGGCCCAATCTCTGCTTTCCAGGCAATTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: PSPGTGVFLGPE*AQSLLSRQFWA
Trigger: GGCCCAGAATTGCCTGGAAAGCAGAGATTGGGCTCATTCAGGCCCCAGGAACACTCCAGTGCCAGGGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
3UTR GCA 72 bp GGGCTCAGCTGCAATGGCCATATGCATGCTAAGGGATaGAGGGACGGGCACGGGACACATATCCAAGGGCTG +
Preference number: 3 (lower is better)
Translates to: GLSCNGHMHAKG*RDGHGTHIQGL
Trigger: CAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATTGCAGCTGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CCA 72 bp GGCAGGTGGAAGGGGAACTGGACAGTGTGTGCCTACTaGGAATGGCTCTGTCCTGTTTGCCTTGCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: GRWKGNWTVCAY*EWLCPVCLAPC
Trigger: GCAGGGAGCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACACTGTCCAGTTCCCCTTCCACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CAA 90 bp GAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 3 (lower is better)
Translates to: EVWRWPICQSSRWGTCGSHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...GGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCATTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGA +
Preference number: 3 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPFICSN*GTWSSR
Trigger: TCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAA...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR TCA 72 bp TGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTaGAGTAGCTGCTTCCATAGGTGGTGGCGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: CQSSRWGTCGSH*SSCFHRWWRGS
Trigger: ACTGCCTCGCCACCACCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR GCA 72 bp TCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCTCCTCTTCAGTGTCCT +
Preference number: 3 (lower is better)
Translates to: STFQGSSGMASC*LTWLSSPLQCP
Trigger: AGGACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR GCA 72 bp AGTGCCTGGCAGGTGGAAGGGGAACTGGACAGTGTGTaGCTACTGGGAATGGCTCTGTCCTGTTTGCCTTGC +
Preference number: 3 (lower is better)
Translates to: SAWQVEGELDSV*LLGMALSCLPC
Trigger: GCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACACTGTCCAGTTCCCCTTCCACCTGCCAGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 72 bp GAACCACCACAAGTTCCAGACTCTGGAAACTGCCCGTaGCCTGAGGCAGGCCTCAAGGCAAGAGGAACCTCA +
Preference number: 3 (lower is better)
Translates to: EPPQVPDSGNCP*PEAGLKARGTS
Trigger: TGAGGTTCCTCTTGCCTTGAGGCCTGCCTCAGGCCACGGGCAGTTTCCAGAGTCTGGAACTTGTGGTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 72 bp CCCACATCTCCAAGGCTTCCTCGTGAGGTCTGGAGGTaGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGT +
Preference number: 3 (lower is better)
Translates to: PTSPRLPREVWR*PICQSSRWGTC
Trigger: ACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATAGGCACTCTTTGGTCTaGCGGGGGCAGGTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: DVESSGTESWENGSLQPYRHSLV*RGQVVG
Trigger: GCCCACCACCTGCCCCCGCAAGACCAAAGAGTGCCT...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CCA 72 bp GGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAG +
Preference number: 3 (lower is better)
Translates to: GHQAILLYPSHT*QTFLRGMLSGE
Trigger: CTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp CTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTGAGAACACGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: LCIEPGKEKHPI*DPPGVLRTRQA
Trigger: AGCCTGGCGTGTTCTCAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGCTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: FCTLATRGRRFSEECSRVLLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 3 (lower is better)
Translates to: AYTPTQAPLHRARERKAPHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 3 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR TCA 72 bp CCACTTCTACCAGGAGTCACCATGGCCCACTTTCCCTaGGACCCTGTAGCTGGAAGAACCACCACAAGTTCC +
Preference number: 3 (lower is better)
Translates to: PLLPGVTMAHFP*DPVAGRTTTSS
Trigger: GGAACTTGTGGTGGTTCTTCCAGCTACAGGGTCTCAGGGAAAGTGGGCCATGGTGACTCCTGGTAGAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 72 bp GCTCCAGGGAATAGCTTGAGATCCTCTGCAGGTCTCTaGTCCAGTAGGGAGAAAGCTGCAGGCAAATCCTGG +
Preference number: 3 (lower is better)
Translates to: APGNSLRSSAGL*SSREKAAGKSW
Trigger: CCAGGATTTGCCTGCAGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR CCA 72 bp TGGAAGGGGAACTGGACAGTGTGTGCCTACTGGGAATaGCTCTGTCCTGTTTGCCTTGCTCCCTGCAGTAAC +
Preference number: 3 (lower is better)
Translates to: WKGNWTVCAYWE*LCPVCLAPCSN
Trigger: GTTACTGCAGGGAGCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACACTGTCCAGTTCCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 72 bp ATCCAGGGGAAGAGGTCCCGATGTCCCCCTCCATGCTaGTTCTCTGTCACAGGTCCAATTCTTGGATCTCTC +
Preference number: 3 (lower is better)
Translates to: IQGKRSRCPPPC*FSVTGPILGSL
Trigger: GAGAGATCCAAGAATTGGACCTGTGACAGAGAACCAGCATGGAGGGGGACATCGGGACCTCTTCCCCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR CAA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 3 (lower is better)
Translates to: ALERFTTFRSDSAADSCLHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 3 (lower is better)
Translates to: FCTLATRGRRFSEECSRVHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 3 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGCCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTG +
Preference number: 3 (lower is better)
Translates to: KANTQAYTPTQAPLHRARPRAVY*LQLGDV
Trigger: CACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGG...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGGCTCCAGGGAATAGCTaGAGATCCTCTGCAGGTCTC +
Preference number: 3 (lower is better)
Translates to: FCTLATRGRRFSEECSRVAPGNS*RSSAGL
Trigger: GAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGC...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR GCA 72 bp AAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGGTCTTCCCGATCCTCG +
Preference number: 3 (lower is better)
Translates to: KFWLLRILVLFI*SNLGTWSSRSS
Trigger: CGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR GCA 72 bp GTTATCCAGGGGAAGAGGTCCCGATGTCCCCCTCCATaGTGGTTCTCTGTCACAGGTCCAATTCTTGGATCT +
Preference number: 3 (lower is better)
Translates to: VIQGKRSRCPPP*WFSVTGPILGS
Trigger: AGATCCAAGAATTGGACCTGTGACAGAGAACCAGCATGGAGGGGGACATCGGGACCTCTTCCCCTGGATAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR CCA 72 bp ATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAACTTACCTGCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: ILVLFICSNLGT*SSRSSNLPAPS
Trigger: GCTGGGAGCAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CAA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATACACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 3 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCACAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGA +
Preference number: 3 (lower is better)
Translates to: KANTQAYTPTQAPLHRARFICSN*GTWSSR
Trigger: TCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAA...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GCTACGGCATCCTTGAGGACGTTGTCATACACTACCAGCAGGATTTCAATACACTCCTTGAGGCACTCTTaGGTCTTGCGGGGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: ATASLRTLSYTTSRISIHSLRHS*VLRGQV
Trigger: CACCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGA...GTGTATTGAAATCCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGCCGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR-3UTR CAA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCACGGCTACGGCATCCTaGAGGACGTTGTCATACACT +
Preference number: 3 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACTATAS*RTLSYT
Trigger: AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGT...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR TCA 72 bp CAACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTaGCACGGTGGCAGAGTCTTATCCACACCCCGTCTC +
Preference number: 3 (lower is better)
Translates to: QQQMNVQPPMLV*HGGRVLSTPRL
Trigger: GAGACGGGGTGTGGATAAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp ATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTaGGTGAACAATGTGTCCCCCAACCCCAAACTAAAC +
Preference number: 3 (lower is better)
Translates to: IASTVLCTSQFC*VNNVSPNPKLN
Trigger: GTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp TGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGATCCTCGAACTTACCTG +
Preference number: 3 (lower is better)
Translates to: CSGSSCCLFAPT*GRGLPDPRTYL
Trigger: CAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 72 bp TGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGATCCTCGAACTTACCAG +
Preference number: 3 (lower is better)
Translates to: CSGSSCCLFAPT*GRGLPDPRTYQ
Trigger: CTGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR-3UTR CAA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGCTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLLLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 3 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 3 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: RVFLRALSLQIPKYWLLIRVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGGATCCAACCAGTCGCTaGCCTATCAATGGTGGTATC +
Preference number: 3 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKDPTSR*PINGGI
Trigger: GATACCACCATTGATAGGCAAGCGACTGGTTGGATC...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGTGCTTCCACGGTCCTTaGCACCTCCCAGTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLCFHGP*HLPVLL
Trigger: CAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCA...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGGGCAAGACAGAAGTCTaGAGTGAGACTCCCTTCAAG +
Preference number: 3 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKGKTEV*SETPFK
Trigger: CTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTAGCTCCAGGGAATAGCTaGAGATCCTCTGCAGGTCTC +
Preference number: 3 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLAPGNS*RSSAGL
Trigger: GAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGC...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 3 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLRVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCAGCGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 3 (lower is better)
Translates to: PENTPGCPSFFSGVAAISELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...GCTGATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 3 (lower is better)
Translates to: ALERFTTFRSDSAADSCLPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTTGAATCCAAACTGCTaGCACATAAATAGAACGGAG +
Preference number: 3 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPLNPNC*HINRTE
Trigger: CTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAA...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAATCCTTGAGGCACTCTTaGGTCTTGCGGGGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKSLRHS*VLRGQV
Trigger: CACCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGA...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGTCCTTGAGGCACTCTTaGGTCTTGCGGGGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQSLRHS*VLRGQV
Trigger: CACCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGA...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR TCA 72 bp GGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTaGTCCAACCAGTCGCTTGCCTATCAATGGTGGTAT +
Preference number: 3 (lower is better)
Translates to: GPSRCRSLNTGF*SNQSLAYQWWY
Trigger: ATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR TCA 72 bp AAATGGAAGCCCAAAGAGGGAGGGATTTGTCCAAAGTaGGGTGGGTGCTCTTGGTCAACCCAAGACTTGCCT +
Preference number: 3 (lower is better)
Translates to: KWKPKEGGICPK*GGCSWSTQDLP
Trigger: AGGCAAGTCTTGGGTTGACCAAGAGCACCCACCTCACTTTGGACAAATCCCTCCCTCTTTGGGCTTCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR GCA 72 bp ACAGTGTGTGCCTACTGGGAATGGCTCTGTCCTGTTTaGCTTGCTCCCTGCAGTAACTATGGGGCACATTTA +
Preference number: 3 (lower is better)
Translates to: TVCAYWEWLCPV*LAPCSNYGAHL
Trigger: TAAATGTGCCCCATAGTTACTGCAGGGAGCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CCA 72 bp TTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTaGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCC +
Preference number: 3 (lower is better)
Translates to: LRSVVCVQFPLS*PLIKSFSIHWA
Trigger: GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTaGCTTTTGATCCAACCAGTCGCTTGCCTATCAATG +
Preference number: 3 (lower is better)
Translates to: FLRALSLQIPKY*LLIQPVACLSM
Trigger: CATTGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp ATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAACTTACTTGCAAGCAGG +
Preference number: 3 (lower is better)
Translates to: ILVLFICSNLGT*SSRSSNLLASR
Trigger: CCTGCTTGCAAGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR CCA 72 bp TGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGATCCTCGAACTTACTTG +
Preference number: 3 (lower is better)
Translates to: CSGSSCCLFAPT*GRGLPDPRTYL
Trigger: CAAGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR-3UTR CAA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKLLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQLLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 3 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAACGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKRVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 3 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp ATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAAGAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 3 (lower is better)
Translates to: MAICMLRDAGTGTGHISKSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...CTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 3 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 3 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTAGGACAAGAGGTGAGAGATCAAGAGCAGGTGACGTGTTTATTGTGGGACGCCCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 3 (lower is better)
Translates to: LGQEVRDQEQVTCLLWDAPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...GGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCACCTCTTGTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CAA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTTGCTTCCACGGTCCTTaGCACCTCCCAGTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCCFHGP*HLPVLL
Trigger: CAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCA...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCTCCAGGGAATAGCTaGAGATCCTCTGCAGGTCTC +
Preference number: 3 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQAPGNS*RSSAGL
Trigger: GAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGC...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR TCA 72 bp CTGCAACATCAGCTCTTACCTGAATTTCCAGCCTGCTaGCATGCCCCACAAATTTTAGACCACAGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: LQHQLLPEFPAC*HAPQILDHSLC
Trigger: GCAGAGGCTGTGGTCTAAAATTTGTGGGGCATGTCAGCAGGCTGGAAATTCAGGTAAGAGCTGATGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CCA 72 bp AGCCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAACCATATGCCTTCAAA +
Preference number: 3 (lower is better)
Translates to: SLQDVESSGTES*ENGSLQPYAFK
Trigger: TTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp AATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTaGCAGAGTCTTATCCACACCCCGTCTCTTTTCTTA +
Preference number: 3 (lower is better)
Translates to: NERAASYASVTR*QSLIHTPSLFL
Trigger: TAAGAAAAGAGACGGGGTGTGGATAAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp ATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAACTTACCAGTGAGAAAC +
Preference number: 3 (lower is better)
Translates to: ILVLFICSNLGT*SSRSSNLPVRN
Trigger: GTTTCTCACTGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR-3UTR CAA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTTGCTTCCACGGTCCTTaGCACCTCCCAGTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVCFHGP*HLPVLL
Trigger: CAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCA...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCGACAGATACAAGAACTaGAATCCAAACTGCTTGCAC +
Preference number: 3 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACDRYKN*NPNCLH
Trigger: GTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTC...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGA +
Preference number: 3 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKFICSN*GTWSSR
Trigger: TCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAA...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
3UTR TCA 72 bp CACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTaGGGTATGTTATTGAATGTTTTGCTCTGGGTCAGT +
Preference number: 3 (lower is better)
Translates to: HVADVSQRNALG*GMLLNVLLWVS
Trigger: ACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR TCA 72 bp GAGAAACTTACACCAGCAGGATTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGCTTGAGATCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: EKLTPAGFQYTC*GAPGNSLRSSA
Trigger: TGCAGAGGATCTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTGTAAGTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR TCA 72 bp TGTCATACACTACCAGCAGGATTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGCTTGAGATCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: CHTLPAGFQYTC*GAPGNSLRSSA
Trigger: TGCAGAGGATCTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTAGTGTATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR GCA 72 bp ACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTTATTGAATGTTTTGCT +
Preference number: 3 (lower is better)
Translates to: TLATRGRRFSEE*SRVRYVIECFA
Trigger: AGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR GCA 72 bp ATAAATTTTGCCTCACGACTGCTAACACAGAAATCATaGCTGAGTTTCCAGCCTGTGGGCCTGCCCTACAGA +
Preference number: 3 (lower is better)
Translates to: INFASRLLTQKS*LSFQPVGLPYR
Trigger: TCTGTAGGGCAGGCCCACAGGCTGGAAACTCAGGCATGATTTCTGTGTTAGCAGTCGTGAGGCAAAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CCA 72 bp CTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: LSFAISHTQSLD*VKLMPCKYVVE
Trigger: CTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 3 (lower is better)
Translates to: RVFLRALSLQIPKYWLLIKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAACTAAGGGCTTCCGCTTaGCCCACACAGCCCACCAGT +
Preference number: 3 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKLRASA*PTQPTS
Trigger: ACTGGTGGGCTGTGTGGGCAAAGCGGAAGCCCTTAG...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR-3UTR CAA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGCATCCTTGAGGACGTaGTCATACACTACCAGCAGG +
Preference number: 3 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCASLRT*SYTTSR
Trigger: CCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGC...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR-3UTR CAA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 3 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 3 (lower is better)
Translates to: TTNERAASYASVTRWQSLSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTAAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 3 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTGATCCAACCAGTCGCTaGCCTATCAATGGTGGTATC +
Preference number: 3 (lower is better)
Translates to: EECSRVRYVIECFALGQFDPTSR*PINGGI
Trigger: GATACCACCATTGATAGGCAAGCGACTGGTTGGATC...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATACAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGACAGATACAAGAACTaGAATCCAAACTGCTTGCAC +
Preference number: 3 (lower is better)
Translates to: MLEISGLCPVPTLLASYQDRYKN*NPNCLH
Trigger: GTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTC...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR TCA 72 bp CTGAGTTTCCAGCCTGTGGGCCTGCCCTACAGATTTTaGACTCTACTGCAACATCAGCTCTTACCTGAATTT +
Preference number: 3 (lower is better)
Translates to: LSFQPVGLPYRF*TLLQHQLLPEF
Trigger: AAATTCAGGTAAGAGCTGATGTTGCAGTAGAGTTCAAAATCTGTAGGGCAGGCCCACAGGCTGGAAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR GCA 72 bp ACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGGGTTCAAACTTGGGTT +
Preference number: 3 (lower is better)
Translates to: TICLQKGSSVVT*GSITSWVQTWV
Trigger: AACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAA +
Preference number: 3 (lower is better)
Translates to: SLQPYAFKKEAL*LPAGPSQVGFK
Trigger: TTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp ATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTT +
Preference number: 3 (lower is better)
Translates to: IKVLVVNTASKT*NLPEPRAGKMV
Trigger: AACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 3 (lower is better)
Translates to: RVFLRALSLQIPKYWLLIELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 3 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACTTGAATCCAAACTGCTaGCACATAAATAGAACGGAG +
Preference number: 3 (lower is better)
Translates to: GKTEVLSETPFKEEYESDLNPNC*HINRTE
Trigger: CTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAA...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACGACAGATACAAGAACTaGAATCCAAACTGCTTGCAC +
Preference number: 3 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYDRYKN*NPNCLH
Trigger: GTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTC...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR TCA 72 bp ATAAAAACATATTGCACATGGTTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGATCCCTAAATACTGGC +
Preference number: 3 (lower is better)
Translates to: IKTYCTWLQESS*GPSRCRSLNTG
Trigger: GCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAACCATGTGCAATATGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 3 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCATTGAATCCAAACTGCTaGCACATAAATAGAACGGAG +
Preference number: 3 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSLNPNC*HINRTE
Trigger: CTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAA...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR TCA 72 bp TCCATATATATCCTACTGGTTTCTTTGGAAAAACCCTaGGACGGTGATGGAGCTGGGGTGTCAAGCCTTATA +
Preference number: 3 (lower is better)
Translates to: SIYILLVSLEKP*DGDGAGVSSLI
Trigger: TATAAGGCTTGACACCCCAGCTCCATCACCGTCTCAGGGTTTTTCCAAAGAAACCAGTAGGATATATATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR GCA 72 bp ATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCAAACGCCCATGTACAT +
Preference number: 3 (lower is better)
Translates to: IPKYWLLIQPVA*LSMVVSNAHVH
Trigger: ATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR GCA 72 bp AATCCAAGACAGGTATTCCTCAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: NPRQVFLKQNKN*FHGPLHLPVLL
Trigger: CAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTGAGGAATACCTGTCTTGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp AATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCC +
Preference number: 3 (lower is better)
Translates to: NLCLPFNELLPP*VVIKVLVVNTA
Trigger: GGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR GCA 72 bp CCCAGAACAGACAGATACAAGAACTTGAATCCAAACTaGTTGCACATAAATAGAACGGAGGTTGGCAAAGGA +
Preference number: 3 (lower is better)
Translates to: PRTDRYKNLNPN*LHINRTEVGKG
Trigger: TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTCTGTTCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CCA 72 bp ATAAATCTCTCTCCATATATATCCTACTGGTTTCTTTaGAAAAACCCTGAGACGGTGATGGAGCTGGGGTGT +
Preference number: 3 (lower is better)
Translates to: INLSPYISYWFL*KNPETVMELGC
Trigger: ACACCCCAGCTCCATCACCGTCTCAGGGTTTTTCCAAAGAAACCAGTAGGATATATATGGAGAGAGATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR-3UTR CAA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCCAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: CVNKTSYETESKTTSGSSQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR-3UTR CAA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTACAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: CSRVRYVIECFALGQFYLQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGCATCCTCTCTGGGCGTaGGGGGCTGCGAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKHPLWA*GAASAG
Trigger: CCCGGCGCTCGCAGCCCCCCACGCCCAGAGAGGATG...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGTGGGCAGGCGTGGGCAGGCAGAGGTTCCAGCTGAAGGCCTCCAGGAGCAGCGCCAGCCGTGCCCTCTaGTGCCTGCCGGCGGTTGGA +
Preference number: 4 (lower is better)
Translates to: KWAGVGRQRFQLKASRSSASRAL*CLPAVG
Trigger: TCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGC...GCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAAGCCGTGCCCTCTGGTaGCTGCCGGCGGTTGGACCC +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPSRALW*LPAVGP
Trigger: GGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCT...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCACCGCTGGCCTCTGTGTaGCCAGGGAGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPPLASV*PGRPSS
Trigger: GGAGCTGGGCCTCCCTGGGCACACAGAGGCCAGCGG...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCATCCTCTCTGGGCGTaGGGGGCTGCGAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: EVWRWPICQSSRWGTCGSHPLWA*GAASAG
Trigger: CCCGGCGCTCGCAGCCCCCCACGCCCAGAGAGGATG...GGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCATCGCGCAGGGTGCAGTaGACGTCCGAGGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPSRRVQ*TSEATR
Trigger: GCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGA...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACGGTGGGCCTGCATCTTGCGGGGGCAGGTaGTGGGCCAGGTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GGMSLYSPRAGSLNGGPASCGGR*WARCGS
Trigger: ACTGCCACACCTGGCCCACCACCTGCCCCCGCAAGA...TGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGGTGTGGGGGTCGTGCTGGCTGTaGGGGAACCCTCACAATCCC +
Preference number: 4 (lower is better)
Translates to: GTGTGHISKGCSGWYGVWGSCWL*GNPHNP
Trigger: GGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCC...CCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCAGCTGCCAGGGTGGTCGCTaGCTGGCCGAGGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: PENTPGCPSFFSGVAAISCQGGR*LAEGRV
Trigger: TACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCA...GCTGATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGGCTCCTCAGCCCCGCCCTTaGCGGTGTCAAACACACTCC +
Preference number: 4 (lower is better)
Translates to: HCPQPRPWRCQTHSWVWAPQPRP*RCQTHS
Trigger: GGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGG...AGCCCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCACGAGAGCAGGCTCCCTaGACGGTGGGCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPREQAP*TVGLQG
Trigger: TCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCG...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GCCAAGGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTGTGCCGAGCCAGCCGTaGCCTCTGGTGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: AKAWLLTATASLRTLSYTVPSQP*PLVPAG
Trigger: GCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCAC...AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCGTGCCTGCCGGCGGTTaGACCCTCGTCCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPVPAGG*TLVRGA
Trigger: AGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCAC...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAGCTGCAGGGCAGAGCTaGCAGTGGCTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPAAGQS*QWLLSR
Trigger: CCTGCTGAGCAGCCACTGCCAGCTCTGCCCTGCAGC...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGGCTCAGTGGTGGTCCTTCTaGCTGACGGAGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HCPQPRPWRCQTHSWVWAQWWSF*LTEAKR
Trigger: CCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTG...AGCCCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCTGCCAGGGTGGTCGCTaGCTGGCCGAGGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPCQGGR*LAEGRV
Trigger: TACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCA...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCGGAACTGTGCCAGGGTaGTCGCTGGCTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIGTVPG*SLAGRG
Trigger: CCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCC...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGTGCTTCCATAGGTGGTaGCGAGGCAGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKCFHRW*RGSAWA
Trigger: AGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCA...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CAGGGTCAGGATGTCCACGAAGAACCGGCGGCTCTTCAGGAGTGGGGAGTGGGCGGTGGTCCTTCTGGCTaGCGGAGGCCAAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: QGQDVHEEPAALQEWGVGGGPSG*RRPRGS
Trigger: ACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACC...GCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR TCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTCGGGGTGTGGAGGGATaGGCCTGTACTCCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGRGVEG*ACTPRE
Trigger: CTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCG...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCTTCAGGAGTGGGGAGTGGGCTCGGAAGGTGGGCAGCTTCAGTTCCTTCTGGGGGGGTCTGGAACTGTaGCAGGGTGGTCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFRSGEWARKVGSFSSFWGGLEL*QGGRWL
Trigger: CAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCC...CCAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR GCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGGCTGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 4 (lower is better)
Translates to: HCPQPRPWRCQTHSWVWADSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...AGCCCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCTTCCTGGCGGCCCCTaGCACAGTCTCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: EVWRWPICQSSRWGTCGSLPGGP*HSLQDW
Trigger: CCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAG...GGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGGTGCCTGCCGGCGGTTaGACCCTCGTCCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGVPAGG*TLVRGA
Trigger: AGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCAC...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTGCACTTGAGTGGGGGTaGGGGGTGTGCCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFALEWG*GVCRAP
Trigger: TGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGC...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCGGAACTGTGCCAGGGTaGTCGCTGGCTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPGTVPG*SLAGRG
Trigger: CCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCC...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACCTGCTCCCAGCTGCGGAACTGTGCCAGGGTaGTCGCTGGCTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SNLGTWSSRSSNLPAPSCGTVPG*SLAGRG
Trigger: CCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCC...GCAGCTGGGAGCAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGGTTGGTACGGGGTGTaGAGGGATGAGCCTGTACTC +
Preference number: 4 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKGWYGV*RDEPVL
Trigger: GAGTACAGGCTCATCCCTCCACACCCCGTACCAACC...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGTGTCAAAGCAGCCGGTaGGGAACATGTGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKCQSSR*GTCGSH
Trigger: GTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACA...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGTCTGGAAACTGCCCGTaGCCTGAGGCAGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: DAGTGTGHISKGCSGWYGSGNCP*PEAGLK
Trigger: CTTGAGGCCTGCCTCAGGCCACGGGCAGTTTCCAGA...CCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp TCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACCTGCTCCCAGCTGCCGGGGTGTGGAGGGATaGGCCTGTACTCCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: SNLGTWSSRSSNLPAPSCRGVEG*ACTPRE
Trigger: CTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCG...GCAGCTGGGAGCAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp TCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTGAAGTAGCTGCTTCCATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SVKAAGGEHVAPTEVAASILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...GGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGGTGTGGTTCCTGGGGCCTGAATaGGCCCAATCTCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GTGTGHISKGCSGWYGVWFLGPE*AQSLLS
Trigger: GGAAAGCAGAGATTGGGCTCATTCAGGCCCCAGGAA...CCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGAGTGTTCCTGGGGCCTaGATGAGCCCAATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKSVPGA*MSPISA
Trigger: AGCAGAGATTGGGCTCATTCAGGCCCCAGGAACACT...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTCCTAGAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTTGAAAACCTCGTGCCGAGCCAGCCGTaGCCTCTGGTGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPREGSRSFCSLLRLENLVPSQP*PLVPAG
Trigger: GCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCAC...GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTCTAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAGTGCCGAGCCAGCCGTaGCCTCTGGTGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKEVPSQP*PLVPAG
Trigger: GCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCAC...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGCAGCAGACAGCTaGCTTCCTGGCGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GTATKPSFCTLATRGRRFSAADS*LPGGPC
Trigger: GCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGA...GAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAAGGTGCCTGCCGGCGGTTaGACCCTCGTCCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: MAICMLRDAGTGTGHISKVPAGG*TLVRGA
Trigger: AGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCAC...CTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCTCTCTGGGGTGGTTCTCCTGCTGGAAGCTGGGTAGGTAGAGGGCAAGACAGAGCTGCAGGGCAGAGCTaGCAGTGGCTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ALWGGSPAGSWVGRGQDRAAGQS*QWLLSR
Trigger: CCTGCTGAGCAGCCACTGCCAGCTCTGCCCTGCAGC...TCTGTCTTGCCCTCTACCTACCCAGCTTCCAGCAGGAGAACCACCCCAGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACGGTGGGCCTGCATCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: GGMSLYSPRAGSLNGGPASNLGT*SSRSSN
Trigger: GTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA...TGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGGTACGGGGTGTGGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACAGGTGTGGCAGTGGTaGTCCTTCTGGCTGACGGAG +
Preference number: 4 (lower is better)
Translates to: WYGVWRDEPVLPESRLPEQVWQW*SFWLTE
Trigger: CTCCGTCAGCCAGAAGGACCACCACTGCCACACCTG...TTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCGTACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGGCACTTGAGTGGGGGTaGGGGGTGTGCCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGALEWG*GVCRAP
Trigger: TGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGC...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGGGAACTGTGCCAGGGTaGTCGCTGGCTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGGTVPG*SLAGRG
Trigger: CCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCC...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCAGGCTCCCTGAACGGTaGGCCTGCAAGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIRLPER*ACKESR
Trigger: TCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCT...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGACCTCCCAGTTCTGCTaGGTGAACAATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: EHCPQPRPWRCQTHSWVWTSQFC*VNNVSP
Trigger: GGGGGACACATTGTTCACCCAGCAGAACTGGGAGGT...CCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGCTTTCCAGGCAATTCTaGGCCAGCTCCATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: DAGTGTGHISKGCSGWYGLSRQF*ASSIPS
Trigger: GCTGGGGATGGAGCTGGCCCAGAATTGCCTGGAAAG...CCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGGCTTACCAGGAGTCACCATaGCCCACTTTCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: HCPQPRPWRCQTHSWVWAYQESP*PTFPET
Trigger: GGTCTCAGGGAAAGTGGGCCATGGTGACTCCTGGTA...AGCCCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 72 bp GGGGGTGTGCCGGGCACCATTGCCAAGGCCTGGCTCTaGACGGCTACGGCATCCTTGAGGACGTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: GGVPGTIAKAWL*TATASLRTLSY
Trigger: GTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTGGTGGTCCTTCTGGCTaGCGGAGGCCAAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGGGPSG*RRPRGS
Trigger: ACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACC...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGGTGCCGAGCCAGCCGTaGCCTCTGGTGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGVPSQP*PLVPAG
Trigger: GCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCAC...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGGTGCCGAGCCAGCCGTaGCCTCTGGTGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: QAILLYPSHTWQTFLRGMVPSQP*PLVPAG
Trigger: GCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCAC...CATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AAGTGGGCAGGCGTGGGCAGGCAGAGGTTCCAGCTGAAGGCCTCCAGGAGCAGCAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KWAGVGRQRFQLKASRSSSSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...GCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACGGTGGGCCTGCATGCACCTCCCAGTTCTaGTGGGTGAACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: GGMSLYSPRAGSLNGGPACTSQF*WVNNVS
Trigger: GGACACATTGTTCACCCAGCAGAACTGGGAGGTGCA...TGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGCCTGAATGAGCCCAATCTCTGCTTTCCAGGCAATTCTGGGCCAGCTCCATCCTCAGCAGCAGACAGCTaGCTTCCTGGCGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLNEPNLCFPGNSGPAPSSAADS*LPGGPC
Trigger: GCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGA...GGATGGAGCTGGCCCAGAATTGCCTGGAAAGCAGAGATTGGGCTCATTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGCCAGCCGTGCCCTCTaGTGCCTGCCGGCGGTTGGA +
Preference number: 4 (lower is better)
Translates to: FKRSTDPPRSKALQGWPPASRAL*CLPAVG
Trigger: TCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGC...AGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTCCACATCCTCTCTGGGCGTaGGGGGCTGCGAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SSVVTCGSITSWVQTWVPHPLWA*GAASAG
Trigger: CCCGGCGCTCGCAGCCCCCCACGCCCAGAGAGGATG...TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGCATCCTCTCTGGGCGTaGGGGGCTGCGAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: VKFWLLRILVLFICSNLGHPLWA*GAASAG
Trigger: CCCGGCGCTCGCAGCCCCCCACGCCCAGAGAGGATG...CCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTGAAGTAGCTGCTTCCGCTGCAGGGCAGAGCTaGCAGTGGCTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SVKAAGGEHVAPTEVAASAAGQS*QWLLSR
Trigger: CCTGCTGAGCAGCCACTGCCAGCTCTGCCCTGCAGC...GGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCAGTGGTGGTCCTTCTaGCTGACGGAGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIQWWSF*LTEAKR
Trigger: CCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTG...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCCAGTGGTGGTCCTTCTaGCTGACGGAGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GPENTPGCPSFFSGVAAIQWWSF*LTEAKR
Trigger: CCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTG...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTCAGGTGTGGCAGTGGTaGTCCTTCTGGCTGACGGAG +
Preference number: 4 (lower is better)
Translates to: PRLFRDGLLLPHLAELSSQVWQW*SFWLTE
Trigger: CTCCGTCAGCCAGAAGGACCACCACTGCCACACCTG...AGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGTCTTGCGGGGGCAGGTaGTGGGCCAGGTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: HMHAKGCRDGHGTHIQGLSCGGR*WARCGS
Trigger: ACTGCCACACCTGGCCCACCACCTGCCCCCGCAAGA...CAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTGCACTTGAGTGGGGGTaGGGGGTGTGCCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGIALEWG*GVCRAP
Trigger: TGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGC...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGCACTTGAGTGGGGGTaGGGGGTGTGCCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: KANTQAYTPTQAPLHRARALEWG*GVCRAP
Trigger: TGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGC...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCCTGCACGGGGGTCTaGAACTGTGCCAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GTATKPSFCTLATRGRRFSCTGV*NCARVV
Trigger: GACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGA...GAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCTGCTTCCATAGGTGGTaGCGAGGCAGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GPENTPGCPSFFSGVAAICFHRW*RGSAWA
Trigger: AGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCA...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACGGTGGGCCTGCAACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 4 (lower is better)
Translates to: GGMSLYSPRAGSLNGGPATASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...TGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGCGGGGTGTGGAGGGATaGGCCTGTACTCCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLRGVEG*ACTPRE
Trigger: CTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCG...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGACATGTGGCTCCCACTaGAGTAGCTGCTTCCATAGG +
Preference number: 4 (lower is better)
Translates to: DAGTGTGHISKGCSGWYGTCGSH*SSCFHR
Trigger: CCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGT...CCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGGCTAACCAAAGAACATGCTaGGCACAAGCTGCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: HCPQPRPWRCQTHSWVWANQRTC*AQAASQ
Trigger: CTGACTCGCAGCTTGTGCTCAGCATGTTCTTTGGTT...AGCCCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCTGCAGCCTCAGGCCCTaGGCTCATCTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: GPENTPGCPSFFSGVAAICSLRP*AHLPIP
Trigger: AGGAATGGGAAGATGAGCTCAGGGCCTGAGGCTGCA...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GCTCTCTGGGGTGGTTCTCCTGCTGGAAGCTGGGTAGGTAGAGGGCAAGACAGATGTGCCGGGCACCATTaGCAAGGCCTGGCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ALWGGSPAGSWVGRGQDRCAGHH*QGLALD
Trigger: GTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACA...TCTGTCTTGCCCTCTACCTACCCAGCTTCCAGCAGGAGAACCACCCCAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTTGTGCCGGGCACCATTaGCAAGGCCTGGCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLCAGHH*QGLALD
Trigger: GTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACA...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTGTGCCGGGCACCATTaGCAAGGCCTGGCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPCAGHH*QGLALD
Trigger: GTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACA...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTGTGCCGGGCACCATTaGCAAGGCCTGGCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: GTATKPSFCTLATRGRRFCAGHH*QGLALD
Trigger: GTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACA...GAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTCACATATCCAAGGGCTaGAGCGGTTGGTACGGGGTG +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGHISKG*SGWYGV
Trigger: CACCCCGTACCAACCGCTGCAGCCCTTGGATATGTG...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCCACATATCCAAGGGCTaGAGCGGTTGGTACGGGGTG +
Preference number: 4 (lower is better)
Translates to: GPENTPGCPSFFSGVAAIHISKG*SGWYGV
Trigger: CACCCCGTACCAACCGCTGCAGCCCTTGGATATGTG...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGTGCACCTCCCAGTTCTaGTGGGTGAACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: DAGTGTGHISKGCSGWYGCTSQF*WVNNVS
Trigger: GGACACATTGTTCACCCAGCAGAACTGGGAGGTGCA...CCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTCCGAGGTCTTGCTGCTaGCCCCAATATTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGPRSCC*PQYSTL
Trigger: GAGGGTGGAATATTGGGGGCAGCAGCAAGACCTCGG...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGGCGGGTGGTGAGCACTaGCCTCAGCCCCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGAGGEH*PQPRPW
Trigger: CCAAGGGCGGGGCTGAGGGCAGTGCTCACCACCCGC...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGCGATGTCCCCCTCCATaGTGGTTCTCTGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: AAPATVSRTGKGLRNPRQRCPPP*WFSVTG
Trigger: ACCTGTGACAGAGAACCAGCATGGAGGGGGACATCG...CTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CCA 90 bp CAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGGTGCCTGCCGGCGGTTaGACCCTCGTCCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: QAILLYPSHTWQTFLRGMVPAGG*TLVRGA
Trigger: AGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCAC...CATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTAGGACAAGAGGTGAGAGATCAAGAGCAGGTGACGTGTTTATTGTGGGACGCCGCCAGCCGTGCCCTCTaGTGCCTGCCGGCGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LGQEVRDQEQVTCLLWDAASRAL*CLPAVG
Trigger: TCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGC...GGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCACCTCTTGTCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCCATCCTCTCTGGGCGTaGGGGGCTGCGAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASHPLWA*GAASAG
Trigger: CCCGGCGCTCGCAGCCCCCCACGCCCAGAGAGGATG...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGGGAAGTGGGCAGGCGTaGGCAGGCAGAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLGSGQA*AGRGSS
Trigger: GCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCC...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCTGCAATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATGTGGTGGGCCAGGTGTaGCAGTGGTGGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SCNGHMHAKGCRDGHGTHVVGQV*QWWSFW
Trigger: CCAGAAGGACCACCACTGCCACACCTGGCCCACCAC...ATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATTGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCAATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCGTGGTGGGCCAGGTGTaGCAGTGGTGGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AMAICMLRDAGTGTGHISVVGQV*QWWSFW
Trigger: CCAGAAGGACCACCACTGCCACACCTGGCCCACCAC...GGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGGCACTTGAGTGGGGGTaGGGGGTGTGCCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKALEWG*GVCRAP
Trigger: TGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGC...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAATGCCAGGGTGGTCGCTaGCTGGCCGAGGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQCQGGR*LAEGRV
Trigger: TACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCA...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGGGAACTGTGCCAGGGTaGTCGCTGGCTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVGTVPG*SLAGRG
Trigger: CCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCC...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTGGTTGGTACGGGGTGTaGAGGGATGAGCCTGTACTC +
Preference number: 4 (lower is better)
Translates to: PRLFRDGLLLPHLAELSSGWYGV*RDEPVL
Trigger: GAGTACAGGCTCATCCCTCCACACCCCGTACCAACC...AGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCTCTCTGGGGTGGTTCTCCTGCTGGAAGCTGGGTAGGTAGAGGGCAAGACAGAAGCTGCTTCCATAGGTaGTGGCGAGGCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALWGGSPAGSWVGRGQDRSCFHR*WRGSAW
Trigger: CCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCT...TCTGTCTTGCCCTCTACCTACCCAGCTTCCAGCAGGAGAACCACCCCAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCTGTCAAAGCAGCCGGTaGGGAACATGTGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GPENTPGCPSFFSGVAAICQSSR*GTCGSH
Trigger: GTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACA...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGGTACGGGGTGTGGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAATCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WYGVWRDEPVLPESRLPESCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...TTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCGTACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGGTGTGGTGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: GTGTGHISKGCSGWYGVWCPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...CCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACCTGCTCCCAGCTGCACCGGCTCTCTGGGGTaGTTCTCCTGCTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SNLGTWSSRSSNLPAPSCTGSLG*FSCWKL
Trigger: CAGCTTCCAGCAGGAGAACCACCCCAGAGAGCCGGT...GCAGCTGGGAGCAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGTGGGCAGGCGTGGGCAGGCAGAGGTTCCAGCTGAAGGCCTCCAGGAGCAGCCTGAGACCCTGTAGCTaGAAGAACCACCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: KWAGVGRQRFQLKASRSSLRPCS*KNHHKF
Trigger: GAACTTGTGGTGGTTCTTCCAGCTACAGGGTCTCAG...GCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp GCCAAGGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTGGTGGTCCTTCTGGCTaGCGGAGGCCAAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: AKAWLLTATASLRTLSYTGGPSG*RRPRGS
Trigger: ACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACC...AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGACATGTGGCTCCCACTaGAGTAGCTGCTTCCATAGG +
Preference number: 4 (lower is better)
Translates to: AAPATVSRTGKGLRNPRQTCGSH*SSCFHR
Trigger: CCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGT...CTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTGAAGTAGCTGCTTCCGTGGATCCCTCTGGCTaGAGGCCACAGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: SVKAAGGEHVAPTEVAASVDPSG*RPQRSQ
Trigger: CTGTGACCTCTGTGGCCTTCAGCCAGAGGGATCCAC...GGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp CGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTGTGCCCTCTGGTGCCTaGCGGCGGTTGGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: RAVYLLQLGDVVFPILELVPSGA*RRLDPR
Trigger: ACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCAC...AAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCCCTTCTCGCGCAGGGTaGAGTGGACGTCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SAALERFTTFRSDSAADSPSRAG*SGRPRR
Trigger: TCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGG...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAGGGGGTCTGGAACTGTaGCAGGGTGGTCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKEGGLEL*QGGRWL
Trigger: CAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCC...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGGGGGGTCTGGAACTGTaGCAGGGTGGTCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVGGLEL*QGGRWL
Trigger: CAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCC...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAGGGGGTCTGGAACTGTaGCAGGGTGGTCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPGGLEL*QGGRWL
Trigger: CAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCC...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GAGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: EHCPQPRPWRCQTHSWVWRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...CCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCATGCACCTCCCAGTTCTaGTGGGTGAACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPCTSQF*WVNNVS
Trigger: GGACACATTGTTCACCCAGCAGAACTGGGAGGTGCA...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTCTTCCTGGCGGCCCCTaGCACAGTCTCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: FKRSTDPPRSKALQGWPPLPGGP*HSLQDW
Trigger: CCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAG...AGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCCCGAGGTCTTGCTaGTGCCCCCAATATTCCACC +
Preference number: 4 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFLPRSC*CPQYST
Trigger: GGTGGAATATTGGGGGCAGCAGCAAGACCTCGGGAG...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCGAGCGAAACTCCGTTTaGAAGCAGGAGGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GPENTPGCPSFFSGVAAIERNSV*KQEAGD
Trigger: GTCTCCTGCCTCCTGCTTGCAAACGGAGTTTCGCTC...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR GCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGCCAGACTCTGGAAACTaGCCGTGGCCTGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLPDSGN*PWPEAG
Trigger: GCCTGCCTCAGGCCACGGGCAGTTTCCAGAGTCTGG...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCAGTGGGCTCGGAAGGTaGGCAGCTTCAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EVWRWPICQSSRWGTCGSSGLGR*AASVPS
Trigger: AGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACT...GGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: GPENTPGCPSFFSGVAAISNLGT*SSRSSN
Trigger: GTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: EVWRWPICQSSRWGTCGSSNLGT*SSRSSN
Trigger: GTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA...GGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCAGCGTGAGGGTGAAGTTCTaGCTGCTCAGGATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PENTPGCPSFFSGVAAISVRVKF*LLRILV
Trigger: CACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC...GCTGATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCGGAAGTGGGCAGGCGTaGGCAGGCAGAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SAALERFTTFRSDSAADSGSGQA*AGRGSS
Trigger: GCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCC...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCGGAAGTGGGCAGGCGTaGGCAGGCAGAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAGSGQA*AGRGSS
Trigger: GCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCC...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGTGGTGGTCCTTCTaGCTGACGGAGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HMHAKGCRDGHGTHIQGLQWWSF*LTEAKR
Trigger: CCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTG...CAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGTCTTGCGGGGGCAGGTaGTGGGCCAGGTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVSCGGR*WARCGS
Trigger: ACTGCCACACCTGGCCCACCACCTGCCCCCGCAAGA...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACTGCCAGGGTGGTCGCTaGCTGGCCGAGGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHCQGGR*LAEGRV
Trigger: TACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCA...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGAGCTGCTTCCATAGGTaGTGGCGAGGCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGSCFHR*WRGSAW
Trigger: CCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCT...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTCGTGAGGTCTGGAGGTaGCCTATCTGTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRLFRDGLLLPHLAELSSREVWR*PICQSS
Trigger: GCTGCTTTGACAGATAGGCCACCTCCAGACCTCACG...AGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTCGTGAGGTCTGGAGGTaGCCTATCTGTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGREVWR*PICQSS
Trigger: GCTGCTTTGACAGATAGGCCACCTCCAGACCTCACG...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCATACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGGCTCGAGAGCTGGGAAAATaGTTCTCTCCAACCATATGC +
Preference number: 4 (lower is better)
Translates to: HCPQPRPWRCQTHSWVWARELGK*FSPTIC
Trigger: GCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCG...AGCCCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTACCTCCCAGTTCTGCTaGGTGAACAATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PRLFRDGLLLPHLAELSSTSQFC*VNNVSP
Trigger: GGGGGACACATTGTTCACCCAGCAGAACTGGGAGGT...AGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCCACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: GPENTPGCPSFFSGVAAIHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTTCAGGAGTGGGGAGTGGGCTCGGAAGGTGGGCAGCTTCAGTTCCTTCTGGCACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LFRSGEWARKVGSFSSFWHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...CCAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CCA 90 bp CACCAGTCAGTCAGGCCAGCACCCAGGATACGCAGTGCCTGGCAGGTGGAAGGGCCTGACACAGAGCTCTaGTCTTTGATGCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: HQSVRPAPRIRSAWQVEGPDTEL*SLMQRS
Trigger: ACTCCTCTGCATCAAAGACCAGAGCTCTGTGTCAGG...CCCTTCCACCTGCCAGGCACTGCGTATCCTGGGTGCTGGCCTGACTGACTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp GCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGAATGGGCATACTCCTTaGGGCACTCTTTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: AAPATVSRTGKGLRNPRQNGHTP*GTLWSC
Trigger: GCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATT...CTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGGTACGGGGTGTGGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAAAATGGGCATACTCCTTaGGGCACTCTTTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: WYGVWRDEPVLPESRLPENGHTP*GTLWSC
Trigger: GCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATT...TTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCGGCTACGGCATCCTTaGGGACGTTGTCATACACTA +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIRLRHP*GRCHTL
Trigger: TAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCG...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000644313.1
CDS-3UTR TCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACGAGAGCAGGCTCCCTaGACGGTGGGCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQREQAP*TVGLQG
Trigger: TCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCG...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCACGAGAGCAGGCTCCCTaGACGGTGGGCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPREQAP*TVGLQG
Trigger: TCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCG...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGCGAGAGCAGGCTCCCTaGACGGTGGGCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSREQAP*TVGLQG
Trigger: TCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCG...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACGGGGTGTGGAGGGATaGGCCTGTACTCCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQRGVEG*ACTPRE
Trigger: CTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCG...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTCCTCCTATGCTAGTGTaGCACGGTGGCAGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGPPMLV*HGGRVL
Trigger: TAAGACTCTGCCACCGTGTCACACTAGCATAGGAGG...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGGTCTCAGCCCCACAGTaGCACCGGCTCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKVSAPQ*HRLSGV
Trigger: CACCCCAGAGAGCCGGTGTCACTGTGGGGCTGAGAC...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATGCGCGCACCACGCGTaGAACGTGCGGACAGGACGC +
Preference number: 4 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPCAHHA*NVRTGR
Trigger: GCGTCCTGTCCGCACGTTTCACGCGTGGTGCGCGCA...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS-3UTR GCA 90 bp GTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGCCTTCTCGCGCAGGGTaGAGTGGACGTCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: VKFWLLRILVLFICSNLGPSRAG*SGRPRR
Trigger: TCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGG...CCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAAGGGGGTCTGGAACTGTaGCAGGGTGGTCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQGGLEL*QGGRWL
Trigger: CAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCC...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCGCTGCAATGGCCATATaGATGCTAAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPENTPGCPSFFSGVAAIAAMAI*MLRDAG
Trigger: CCCTGCATCCCTTAGCATGCATATGGCCATTGCAGC...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCGCTGCAATGGCCATATaGATGCTAAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIAAMAI*MLRDAG
Trigger: CCCTGCATCCCTTAGCATGCATATGGCCATTGCAGC...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAGTGGTGGCGAGGCAGTaGCTGGGCTCAGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPVVARQ*LGSAAM
Trigger: CATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCAC...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCACTTCCTGGCGGCCCCTaGCACAGTCTCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPLPGGP*HSLQDW
Trigger: CCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAG...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGTCAGCAGCAGACAGCTaGCTTCCTGGCGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSSAADS*LPGGPC
Trigger: GCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGA...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AAGTGGGCAGGCGTGGGCAGGCAGAGGTTCCAGCTGAAGGCCTCCAGGAGCAGCGCTGAGATTTTCAGCTaGTCTGGAAAGATTCACCAC +
Preference number: 4 (lower is better)
Translates to: KWAGVGRQRFQLKASRSSAEIFS*SGKIHH
Trigger: GTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC...GCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAACCGCTGGCCTCTGTGTaGCCAGGGAGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TRGRRFSEECSRVRYVIEPLASV*PGRPSS
Trigger: GGAGCTGGGCCTCCCTGGGCACACAGAGGCCAGCGG...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCACCACGCGTGAAACGTaGGGACAGGACGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWATTRET*GQDAPR
Trigger: TCTGGGGGCGTCCTGTCCGCACGTTTCACGCGTGGT...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS-3UTR GCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGGCACCCCTCCGGCTTaGGCAGGGAGCAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: MLEISGLCPVPTLLASYQGTPPA*AGSKGT
Trigger: GGTCCCTTTGCTCCCTGCGCAAGCCGGAGGGGTGCC...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS-3UTR GCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGAGTGGAGGACTGGGGTaGCCCTCATCCTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKSGGLG*PSSSHA
Trigger: GGCGTGGGAGGATGAGGGGCACCCCAGTCCTCCACT...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATTCGCGCAGGGTGCAGTaGACGTCCGAGGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNSRRVQ*TSEATR
Trigger: GCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGA...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCATCGCGCAGGGTGCAGTaGACGTCCGAGGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSSRRVQ*TSEATR
Trigger: GCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGA...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGGCTGCAGGGCAGAGCTaGCAGTGGCTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSAAGQS*QWLLSR
Trigger: CCTGCTGAGCAGCCACTGCCAGCTCTGCCCTGCAGC...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCGTGAGGGTGAAGTTCTaGCTGCTCAGGATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPVRVKF*LLRILV
Trigger: CACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAGGAAGTGGGCAGGCGTaGGCAGGCAGAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSVVTCGSITSWVQTWVPGSGQA*AGRGSS
Trigger: GCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCC...TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGCAGGTGTGGCAGTGGTaGTCCTTCTGGCTGACGGAG +
Preference number: 4 (lower is better)
Translates to: KANTQAYTPTQAPLHRARQVWQW*SFWLTE
Trigger: CTCCGTCAGCCAGAAGGACCACCACTGCCACACCTG...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGGCCGGGTAGGCTGGTaGCTGGAACAGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: KANTQAYTPTQAPLHRARGRVGW*LEQHLS
Trigger: ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCC...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGAACTGTGCCAGGGTaGTCGCTGGCTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: EGEVLAAQDPRAVYLLQLGTVPG*SLAGRG
Trigger: CCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCC...AAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTTCCTGCACGGGGGTCTaGAACTGTGCCAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLSCTGV*NCARVV
Trigger: GACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGA...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCAGGCTCCCTGAACGGTaGGCCTGCAAGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: SAALERFTTFRSDSAADSRLPER*ACKESR
Trigger: TCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCT...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCTGGCGAGGCAGTGCCTaGGCTCAGCTGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACWRGSA*AQLQWP
Trigger: TGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCA...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAATGGCGAGGCAGTGCCTaGGCTCAGCTGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKEWRGSA*AQLQWP
Trigger: TGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCA...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCTGGCGAGGCAGTGCCTaGGCTCAGCTGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAWRGSA*AQLQWP
Trigger: TGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCA...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGTASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTACCTCCCAGTTCTGCTaGGTGAACAATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFTSQFC*VNNVSP
Trigger: GGGGGACACATTGTTCACCCAGCAGAACTGGGAGGT...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTGCACTGGAGTGTTCCTaGGGCCTGAATGAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFALECS*GLNEPN
Trigger: ATTGGGCTCATTCAGGCCCCAGGAACACTCCAGTGC...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTTGCCTTCCCATCCCCTaGCACTGGAGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGICLPIP*HWSVPG
Trigger: CCCAGGAACACTCCAGTGCCAGGGGATGGGAAGGCA...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCAGCGATCACTCTGTGGAGTaGCTCCAAAGCTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PENTPGCPSFFSGVAAISDHSVE*LQSSSL
Trigger: GAGGGAAGAGCTTTGGAGCCACTCCACAGAGTGATC...GCTGATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CCA 90 bp GCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGTGTGCCTACTGGGAATaGCTCTGTCCTGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: AAPATVSRTGKGLRNPRQCAYWE*LCPVCL
Trigger: AAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACA...CTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 72 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCAGTGTCCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: PRLFRDGLLLPH*AELSSSVSSSS
Trigger: AGAGGAAGAGGACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTAATGGGCATACTCCTTaGGGCACTCTTTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGNGHTP*GTLWSC
Trigger: GCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATT...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTTTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGC +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGFQYTC*GAPGNS
Trigger: GCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAA...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCGAGAGCAGGCTCCCTaGACGGTGGGCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHREQAP*TVGLQG
Trigger: TCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCG...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTACGGGGTGTGGAGGGATaGGCCTGTACTCCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLRGVEG*ACTPRE
Trigger: CTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCG...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCCGGGGTGTGGAGGGATaGGCCTGTACTCCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASRGVEG*ACTPRE
Trigger: CTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCG...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGCACACAGCGGGTGGTaGGCACTGCCCTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKAHSGW*ALPSAP
Trigger: CGGGGCTGAGGGCAGTGCTCACCACCCGCTGTGTGC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTTGGGTAACGACGACCTaGCACAGAGCTCTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFWVTTT*HRALVF
Trigger: AAAGACCAGAGCTCTGTGTCAGGTCGTCGTTACCCA...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGAAACTGCCCGTGGCCTaGGGCAGGCCTCAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSKLPVA*GRPQGK
Trigger: CTTGCCTTGAGGCCTGCCTCAGGCCACGGGCAGTTT...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACGTGCCCTCTGGTGCCTaGCGGCGGTTGGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYVPSGA*RRLDPR
Trigger: ACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCAC...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGTGCCCTCTGGTGCCTaGCGGCGGTTGGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLVPSGA*RRLDPR
Trigger: ACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCAC...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGCCTTCTCGCGCAGGGTaGAGTGGACGTCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLPSRAG*SGRPRR
Trigger: TCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGG...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTCCTTCTCGCGCAGGGTaGAGTGGACGTCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPPSRAG*SGRPRR
Trigger: TCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGG...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: PRLFRDGLLLPHLAELSSLVLFI*SNLGTW
Trigger: CCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAG...AGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCTGTGCCGGGCACCATTaGCAAGGCCTGGCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: AAQDPRAVYLLQLGDVVFCAGHH*QGLALD
Trigger: GTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACA...GAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTGGGGGTCTGGAACTGTaGCAGGGTGGTCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TTNERAASYASVTRWQSLGGLEL*QGGRWL
Trigger: CAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCC...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGGTGGTGGCGAGGCAGTaGCTGGGCTCAGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGVVARQ*LGSAAM
Trigger: CATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCAC...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPGMASC*LTWLSS
Trigger: AGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCC...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKGMASC*LTWLSS
Trigger: AGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCC...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GAGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: EHCPQPRPWRCQTHSWVWAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...CCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 4 (lower is better)
Translates to: AYTPTQAPLHRARERKAPDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTACTTCCTGGCGGCCCCTaGCACAGTCTCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLLPGGP*HSLQDW
Trigger: CCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAG...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCCTTCCTGGCGGCCCCTaGCACAGTCTCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASLPGGP*HSLQDW
Trigger: CCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAG...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGCGGGTGGTGAGCACTaGCCTCAGCCCCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAAGGEH*PQPRPW
Trigger: CCAAGGGCGGGGCTGAGGGCAGTGCTCACCACCCGC...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTGCTTGTGCTCACCAATaGCTTCCCATCCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGIACAHQ*LPIPWH
Trigger: GTGCCAGGGGATGGGAAGGCATTGGTGAGCACAAGC...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACTTGCAAGCAGGAGGCAGGAGGATGGCGCCTaGTTGTGCTCACCAATGCCT +
Preference number: 4 (lower is better)
Translates to: SNLGTWSSRSSNLLASRRQEDGA*LCSPMP
Trigger: AGGCATTGGTGAGCACAAGCAGGCGCCATCCTCCTG...CCTCCTGCTTGCAAGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR GCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAGCCTTCCGCGCGCACTaGTCTAGCCATCCTTACGTC +
Preference number: 4 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKEAFRAH*SSHPYV
Trigger: GACGTAAGGATGGCTAGAGCAGTGCGCGCGGAAGGC...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS-3UTR GCA 90 bp GAGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGCTCAAAAGACGTCACTaGAGAATGAATCAACCACGT +
Preference number: 4 (lower is better)
Translates to: EHCPQPRPWRCQTHSWVWLKRRH*RMNQPR
Trigger: ACGTGGTTGATTCATTCTGCAGTGACGTCTTTTGAG...CCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCGGCTTATGTAAGGCATaGACCGACACTCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPGLCKA*TDTQTR
Trigger: CCTGGTCTGAGTGTCGGTGCATGCCTTACATAAGCC...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGTGCCTGCCGGCGGTTaGACCCTCGTCCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKVPAGG*TLVRGA
Trigger: AGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCAC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATGCCAGCCGTGCCCTCTaGTGCCTGCCGGCGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNASRAL*CLPAVG
Trigger: TCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGC...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCGCGCAGGGTGCAGTaGACGTCCGAGGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTSRRVQ*TSEATR
Trigger: GCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGA...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGTCGCGCAGGGTGCAGTaGACGTCCGAGGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWSRRVQ*TSEATR
Trigger: GCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGA...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGAGTGGGCTCGGAAGGTaGGCAGCTTCAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGSGLGR*AASVPS
Trigger: AGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACT...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RVFLRALSLQIPKYWLLIFRSGE*ARKVGS
Trigger: GCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAA...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAATTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TQAYTPTQAPLHRARERKFRSGE*ARKVGS
Trigger: GCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAA...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTGCTGCAGGGCAGAGCTaGCAGTGGCTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCAAGQS*QWLLSR
Trigger: CCTGCTGAGCAGCCACTGCCAGCTCTGCCCTGCAGC...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTGGTGGGCCAGGTGTaGCAGTGGTGGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPVVGQV*QWWSFW
Trigger: CCAGAAGGACCACCACTGCCACACCTGGCCCACCAC...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACGTGGTGGGCCAGGTGTaGCAGTGGTGGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHVVGQV*QWWSFW
Trigger: CCAGAAGGACCACCACTGCCACACCTGGCCCACCAC...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGCACTTGAGTGGGGGTaGGGGGTGTGCCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTALEWG*GVCRAP
Trigger: TGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGC...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAGGCCGGGTAGGCTGGTaGCTGGAACAGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPGRVGW*LEQHLS
Trigger: ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCC...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATATCCTGCACGGGGGTCTaGAACTGTGCCAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPISCTGV*NCARVV
Trigger: GACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGA...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTTCCTGCACGGGGGTCTaGAACTGTGCCAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RAVYLLQLGDVVFPILELSCTGV*NCARVV
Trigger: GACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGA...AAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAAAGGCTCCCTGAACGGTaGGCCTGCAAGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQRLPER*ACKESR
Trigger: TCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCT...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTAGGACAAGAGGTGAGAGATCAAGAGCAGGTGACGTGTTTATTGTGGGACGCCTGGCGAGGCAGTGCCTaGGCTCAGCTGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: LGQEVRDQEQVTCLLWDAWRGSA*AQLQWP
Trigger: TGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCA...GGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCACCTCTTGTCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAATGCTTCCATAGGTGGTaGCGAGGCAGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKECFHRW*RGSAWA
Trigger: AGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCA...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTTGCTTCCATAGGTGGTaGCGAGGCAGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FKRSTDPPRSKALQGWPPCFHRW*RGSAWA
Trigger: AGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCA...AGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCACATCTCCAAGGCTTCCTCGTGAGGTCTGGAGGTGGCCTATCTGTCAAAGCATGTCAAAGCAGCCGGTaGGGAACATGTGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PHLQGFLVRSGGGLSVKACQSSR*GTCGSH
Trigger: GTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACA...TGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTCTGGCTACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GLALDGYGILEDVVIHSGYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...GCCAGAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGTGTGGTGGAGAGAGGTaGGAACTGTTTAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKCGGER*ELFKSL
Trigger: CAAAGATTTAAACAGTTCCCACCTCTCTCCACCACA...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGATTTTCAGCTGCTCTaGAAAGATTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GMQGRARDTYPRAAAVGTDFQLL*KDSPPS
Trigger: GGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATC...CGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACTGCTAACACAGAAATCATGCCTGAGTTTCCAGCCTGTGGGCCTGCCCTACAGGTGACACCGGCTCTCTaGGGTGGTTCTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TANTEIMPEFPACGPALQVTPAL*GGSPAG
Trigger: TCCAGCAGGAGAACCACCCCAGAGAGCCGGTGTCAC...CTGTAGGGCAGGCCCACAGGCTGGAAACTCAGGCATGATTTCTGTGTTAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GCAATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCTCTCCGCTTTCCTCCTaGATCACTCTGTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AMAICMLRDAGTGTGHISSPLSS*ITLWSG
Trigger: GCCACTCCACAGAGTGATCCAGGAGGAAAGCGGAGA...GGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR CAA 72 bp ATTGCCAAGGCCTGGCTCTTGACGGCTACGGCATCCTaGAGGACGTTGTCATACACTCTGGCTTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IAKAWLLTATAS*RTLSYTLASRR
Trigger: CCTCCTGGAAGCCAGAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAGGTGGTCCTTCTGGCTaGCGGAGGCCAAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIGGPSG*RRPRGS
Trigger: ACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACC...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTGTGATCTTGCAGGGTaGCCTCTAGGAAGTAATGGG +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPCDLAG*PLGSNG
Trigger: CCCATTACTTCCTAGAGGTCACCCTGCAAGATCACA...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTTTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGC +
Preference number: 4 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFFQYTC*GAPGNS
Trigger: GCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAA...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTCGGGGTGTGGAGGGATaGGCCTGTACTCCCCGAGAG +
Preference number: 4 (lower is better)
Translates to: RGRRFSEECSRVRYVIECRGVEG*ACTPRE
Trigger: CTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCG...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTCTGGCAACCAAAGAACATGCTaGGCACAAGCTGCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GLALDGYGILEDVVIHSGNQRTC*AQAASQ
Trigger: CTGACTCGCAGCTTGTGCTCAGCATGTTCTTTGGTT...GCCAGAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGCCCAGTTCTGCTGGGTaGACAATGTGTCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVPSSAG*TMCPPT
Trigger: GGTTGGGGGACACATTGTTCACCCAGCAGAACTGGG...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAHHLPI*LSSRQL
Trigger: CAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTG...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAACACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKEHHLPI*LSSRQL
Trigger: CAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTG...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCATCACCAGGGCTGATTTaGGAGAGGGAAGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPSPGLI*EREGGA
Trigger: GGCCCCTCCTTCCCTCTCTCAAATCAGCCCTGGTGA...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp CAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGTCACCAGGGCTGATTTaGGAGAGGGAAGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QAILLYPSHTWQTFLRGMSPGLI*EREGGA
Trigger: GGCCCCTCCTTCCCTCTCTCAAATCAGCCCTGGTGA...CATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGCCTCTGAATTTAACCTaGTGCCAGCCCTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGPLNLT*CQPWEE
Trigger: TTCCTCCCAGGGCTGGCATCAGGTTAAATTCAGAGG...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCGGCAGTCAGATTGCTTaGGCTCAGGAGTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: AYTPTQAPLHRARERKAPGSQIA*AQESET
Trigger: GGTCTCAGACTCCTGAGCTCAAGCAATCTGACTGCC...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp ATGGGAGTGCCCAAGGGTGGAAGAAATACAAGTGGATCCCTCTGGCTGAAGGCCCGGCTACGGCATCCTTaGGGACGTTGTCATACACTC +
Preference number: 4 (lower is better)
Translates to: MGVPKGGRNTSGSLWLKARLRHP*GRCHTL
Trigger: GAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCG...GGCCTTCAGCCAGAGGGATCCACTTGTATTTCTTCCACCCTTGGGCACTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATGTGCCCTCTGGTGCCTaGCGGCGGTTGGACCCTCGT +
Preference number: 4 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNVPSGA*RRLDPR
Trigger: ACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCAC...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCACCTTCTCGCGCAGGGTaGAGTGGACGTCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSPSRAG*SGRPRR
Trigger: TCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGG...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGCCTTCTCGCGCAGGGTaGAGTGGACGTCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKPSRAG*SGRPRR
Trigger: TCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGG...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: GTATKPSFCTLATRGRRFLVLFI*SNLGTW
Trigger: CCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAG...GAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTGTGCCGGGCACCATTaGCAAGGCCTGGCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHCAGHH*QGLALD
Trigger: GTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACA...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCAGGGGGTCTGGAACTGTaGCAGGGTGGTCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSGGLEL*QGGRWL
Trigger: CAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCC...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCATGCATGCTAAGGGATaGAGGGACGGGCACGGGACA +
Preference number: 4 (lower is better)
Translates to: SAALERFTTFRSDSAADSMHAKG*RDGHGT
Trigger: TGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGGCTGCAATGGCCATATaGATGCTAAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGAAMAI*MLRDAG
Trigger: CCCTGCATCCCTTAGCATGCATATGGCCATTGCAGC...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTGTGGTGGCGAGGCAGTaGCTGGGCTCAGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCVVARQ*LGSAAM
Trigger: CATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCAC...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RAVYLLQLGDVVFPILELGMASC*LTWLSS
Trigger: AGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCC...AAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTCCATCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSVVTCGSITSWVQTWVPSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAATCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGCTTCCTGGCGGCCCCTaGCACAGTCTCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLLPGGP*HSLQDW
Trigger: CCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAG...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGCGGCCCAAGAGGGGATaGCTAGGACAAGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVRPKRG*LGQEVR
Trigger: TCTCACCTCTTGTCCTAGGCATCCCCTCTTGGGCCG...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCCGAGGTCTTGCTGCTaGCCCCAATATTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKPRSCC*PQYSTL
Trigger: GAGGGTGGAATATTGGGGGCAGCAGCAAGACCTCGG...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACTTGCAAGCAGGAGGGATGGCGCCTGCTTGTaGTCACCAATGCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SNLGTWSSRSSNLLASRRDGACL*SPMPSH
Trigger: ATGGGAAGGCATTGGTGAGCACAAGCAGGCGCCATC...CCTCCTGCTTGCAAGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR GCA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCCCCAGAAAGTTCTaGCTTCCGCGCGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: DVESSGTESWENGSLQPYAPRKF*LPRALL
Trigger: GAGCAGTGCGCGCGGAAGGCAGAACTTTCTGGGGGC...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS-3UTR GCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGACCCAGGATACGCAGTaGCTGGCAGGTGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGTQDTQ*LAGGRG
Trigger: TCCCCTTCCACCTGCCAGGCACTGCGTATCCTGGGT...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCGCCAGCCGTGCCCTCTaGTGCCTGCCGGCGGTTGGA +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSASRAL*CLPAVG
Trigger: TCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGC...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGTCGCGCAGGGTGCAGTaGACGTCCGAGGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKSRRVQ*TSEATR
Trigger: GCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGA...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: EGEVLAAQDPRAVYLLQLFRSGE*ARKVGS
Trigger: GCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAA...AAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAATTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: MLEISGLCPVPTLLASYQFRSGE*ARKVGS
Trigger: GCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAA...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPFRSGE*ARKVGS
Trigger: GCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAA...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAGCTGCAGGGCAGAGCTaGCAGTGGCTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKAAGQS*QWLLSR
Trigger: CCTGCTGAGCAGCCACTGCCAGCTCTGCCCTGCAGC...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGCAGTGGTGGTCCTTCTaGCTGACGGAGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKQWWSF*LTEAKR
Trigger: CCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTG...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGTGGTGGGCCAGGTGTaGCAGTGGTGGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLVVGQV*QWWSFW
Trigger: CCAGAAGGACCACCACTGCCACACCTGGCCCACCAC...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAATCTTGCGGGGGCAGGTaGTGGGCCAGGTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKSCGGR*WARCGS
Trigger: ACTGCCACACCTGGCCCACCACCTGCCCCCGCAAGA...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGACCATTGCCAAGGCCTaGCTCTTGACGGCTACGGCA +
Preference number: 4 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKTIAKA*LLTATA
Trigger: TGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGT...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGACCATTGCCAAGGCCTaGCTCTTGACGGCTACGGCA +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVTIAKA*LLTATA
Trigger: TGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGT...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGCACTTGAGTGGGGGTaGGGGGTGTGCCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWALEWG*GVCRAP
Trigger: TGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGC...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGGGCCGGGTAGGCTGGTaGCTGGAACAGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGGRVGW*LEQHLS
Trigger: ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCC...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGTGCCAGGGTGGTCGCTaGCTGGCCGAGGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQCQGGR*LAEGRV
Trigger: TACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCA...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTGCCAGGGTGGTCGCTaGCTGGCCGAGGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: EECSRVRYVIECFALGQFCQGGR*LAEGRV
Trigger: TACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCA...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATGGAACTGTGCCAGGGTaGTCGCTGGCTGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNGTVPG*SLAGRG
Trigger: CCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCC...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAAGGCTCCCTGAACGGTaGGCCTGCAAGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: MLEISGLCPVPTLLASYQRLPER*ACKESR
Trigger: TCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCT...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCATGCTTCCATAGGTGGTaGCGAGGCAGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPCFHRW*RGSAWA
Trigger: AGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCA...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGAGCTGCTTCCATAGGTaGTGGCGAGGCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKSCFHR*WRGSAW
Trigger: CCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCT...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGTCAAAGCAGCCGGTaGGGAACATGTGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SAALERFTTFRSDSAADSCQSSR*GTCGSH
Trigger: GTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACA...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCCGTGAGGTCTGGAGGTaGCCTATCTGTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: AYTPTQAPLHRARERKAPREVWR*PICQSS
Trigger: GCTGCTTTGACAGATAGGCCACCTCCAGACCTCACG...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGTCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLSCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCTGCAATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATTACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SCNGHMHAKGCRDGHGTHYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...ATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCGAGAGCTGGGAAAATaGTTCTCTCCAACCATATGC +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIRELGK*FSPTIC
Trigger: GCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCG...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GTATKPSFCTLATRGRRFSGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...GAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGGGGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTA +
Preference number: 4 (lower is better)
Translates to: DAGTGTGHISKGCSGWYGELLPP*VVIKVL
Trigger: TAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC...CCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCACTTGCCTATCAATGGTaGTATCAAACGCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPLAYQW*YQTPMY
Trigger: GTACATGGGCGTTTGATACCACCATTGATAGGCAAG...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTCGCTTGCCTATCAATaGTGGTATCAAACGCCCATG +
Preference number: 4 (lower is better)
Translates to: PRLFRDGLLLPHLAELSSSLAYQ*WYQTPM
Trigger: CATGGGCGTTTGATACCACCATTGATAGGCAAGCGA...AGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGCACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: KANTQAYTPTQAPLHRARHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAATATACACCCCTCCGCTaGCCTCTGTGTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQYTPLR*PLCAQG
Trigger: TCCCTGGGCACACAGAGGCCAGCGGAGGGGTGTATA...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTGAAGTAGCTGCTTCCGGCTCAGAGAGAGGTTaGGTCAACTGCCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: SVKAAGGEHVAPTEVAASGSERG*VNCLPT
Trigger: TGTTGGAAGGCAGTTGACCCAACCTCTCTCTGAGCC...GGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCGGGAGTGCCCAAGGGTaGAAGAAATACAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPGSAQG*KKYKWI
Trigger: GATCCACTTGTATTTCTTCCACCCTTGGGCACTCCC...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTGGGAGTGCCCAAGGGTaGAAGAAATACAAGTGGATC +
Preference number: 4 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLGSAQG*KKYKWI
Trigger: GATCCACTTGTATTTCTTCCACCCTTGGGCACTCCC...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGTGGCTTCCAGGAGGATaGCGCCTGCTTGTGCTCACC +
Preference number: 4 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSWLPGG*RLLVLT
Trigger: GGTGAGCACAAGCAGGCGCCATCCTCCTGGAAGCCA...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTCTGGCCACAGGTCCAATTCTTaGATCTCTCCGCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLALDGYGILEDVVIHSGHRSNS*ISPLSS
Trigger: GGAGGAAAGCGGAGAGATCCAAGAATTGGACCTGTG...GCCAGAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCAGGATACGCAGTGCCTaGCAGGTGGAAGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACRIRSA*QVEGEL
Trigger: CAGTTCCCCTTCCACCTGCCAGGCACTGCGTATCCT...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTCGTTGTAGCGATCCATaGAGTGGTCCAGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGIRCSDP*SGPAGR
Trigger: TCTACCTGCTGGACCACTTCATGGATCGCTACAACG...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGTGTGATCTTGCAGGGTaGCCTCTAGGAAGTAATGGG +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGCDLAG*PLGSNG
Trigger: CCCATTACTTCCTAGAGGTCACCCTGCAAGATCACA...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTCTCCAGGGAATAGCTTaGGATCCTCTGCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGILQGIA*DPLQVS
Trigger: AGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAG...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp ATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAAGCTCCAGGGAATAGCTTaGGATCCTCTGCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: MAICMLRDAGTGTGHISKLQGIA*DPLQVS
Trigger: AGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAG...CTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGCGAGAGCAGGCTCCCTaGACGGTGGGCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAREQAP*TVGLQG
Trigger: TCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCG...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTACATGTGGCTCCCACTaGAGTAGCTGCTTCCATAGG +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGITCGSH*SSCFHR
Trigger: CCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGT...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGTCCAAGGCTTCCTCGTaGGGTCTGGAGGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSSKASS*GLEVAY
Trigger: ATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGA...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: TQAYTPTQAPLHRARERKAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCATCCTCCGGGGGTCCTaGGAACACGCCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSILRGS*EHARLP
Trigger: GGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGAT...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTAAATACTGGCTTTTaGTCCAACCAGTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFLNTGF*SNQSLA
Trigger: GGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAG...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCTAAATACTGGCTTTTaGTCCAACCAGTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPLNTGF*SNQSLA
Trigger: GGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAG...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCTTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACLQESS*GPSRCR
Trigger: TCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAA...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGCCCAGTTCTGCTGGGTaGACAATGTGTCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: VKFWLLRILVLFICSNLGPSSAG*TMCPPT
Trigger: GGTTGGGGGACACATTGTTCACCCAGCAGAACTGGG...CCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGCACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGHHLPI*LSSRQL
Trigger: CAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTG...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQHHLPI*LSSRQL
Trigger: CAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTG...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTCCTCCTATGCTAGTGTaGCACGGTGGCAGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGIPPMLV*HGGRVL
Trigger: TAAGACTCTGCCACCGTGTCACACTAGCATAGGAGG...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTGGGTCGTGCTGGCTGTaGGGGAACCCTCACAATCCC +
Preference number: 4 (lower is better)
Translates to: RGRRFSEECSRVRYVIECGSCWL*GNPHNP
Trigger: GGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCC...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAGGGTCGTGCTGGCTGTaGGGGAACCCTCACAATCCC +
Preference number: 4 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKGSCWL*GNPHNP
Trigger: GGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCC...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGTCTCAGCCCCACAGTaGCACCGGCTCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQVSAPQ*HRLSGV
Trigger: CACCCCAGAGAGCCGGTGTCACTGTGGGGCTGAGAC...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAGGTGGGAGGATCACTTaGGCCCAGAAGGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPGGRIT*AQKVEA
Trigger: AGCTTCAACCTTCTGGGCTCAAGTGATCCTCCCACC...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCAGTGTTCCTGGGGCCTaGATGAGCCCAATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWASVPGA*MSPISA
Trigger: AGCAGAGATTGGGCTCATTCAGGCCCCAGGAACACT...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GCTCTCTGGGGTGGTTCTCCTGCTGGAAGCTGGGTAGGTAGAGGGCAAGACAGAGATACAACACATTCCTaGGGACGGCTCAAAAGACGT +
Preference number: 4 (lower is better)
Translates to: ALWGGSPAGSWVGRGQDRDTTHS*GRLKRR
Trigger: ACGTCTTTTGAGCCGTCCTCAGGAATGTGTTGTATC...TCTGTCTTGCCCTCTACCTACCCAGCTTCCAGCAGGAGAACCACCCCAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGLVLFI*SNLGTW
Trigger: CCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAG...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTTGCTCAGGATCCTCGTaGTGTTTATTTGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGCSGSS*CLFAPT
Trigger: AGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCTGCTCAGGATCCTCGTaGTGTTTATTTGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: GPENTPGCPSFFSGVAAICSGSS*CLFAPT
Trigger: AGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTGCCAAGCATAGGTCCTaGACGGGGGTCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: RAVYLLQLGDVVFPILELAKHRS*TGVWNC
Trigger: ACAGTTCCAGACCCCCGTGCAGGACCTATGCTTGGC...AAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AAGGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTACCGCTGCAATGGCCATATaGATGCTAAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: KAWLLTATASLRTLSYTTAAMAI*MLRDAG
Trigger: CCCTGCATCCCTTAGCATGCATATGGCCATTGCAGC...GGTAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643539.1
CDS-3UTR GCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGTGGTGGCGAGGCAGTaGCTGGGCTCAGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTVVARQ*LGSAAM
Trigger: CATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCAC...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGTCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: QAILLYPSHTWQTFLRGMENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...CATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGTCAGCAGCAGACAGCTaGCTTCCTGGCGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWSAADS*LPGGPC
Trigger: GCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGA...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTCAGCAGCAGACAGCTaGCTTCCTGGCGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGSAADS*LPGGPC
Trigger: GCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGA...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACTCAGCAGCAGACAGCTaGCTTCCTGGCGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNSAADS*LPGGPC
Trigger: GCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGA...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTTCCAGCCTGCTGACATaGCCCACAAATTTTAGACCA +
Preference number: 4 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLSSLLT*PTNFRP
Trigger: TGGTCTAAAATTTGTGGGGCATGTCAGCAGGCTGGA...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCGGTCATTCTGCAGCTTaGTCAGGCTTGAAAACCTCT +
Preference number: 4 (lower is better)
Translates to: GTATKPSFCTLATRGRRFGHSAA*SGLKTS
Trigger: AGAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACC...GAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGCTTGTGCTCACCAATaGCTTCCCATCCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPACAHQ*LPIPWH
Trigger: GTGCCAGGGGATGGGAAGGCATTGGTGAGCACAAGC...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTGATGGCGCCTGCTTGTaGTCACCAATGCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLDGACL*SPMPSH
Trigger: ATGGGAAGGCATTGGTGAGCACAAGCAGGCGCCATC...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCTCCTAGAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTTGAAAACCTCAGTGGGCTCGGAAGGTaGGCAGCTTCAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PPREGSRSFCSLLRLENLSGLGR*AASVPS
Trigger: AGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACT...GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTCTAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTAGTGGGCTCGGAAGGTaGGCAGCTTCAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLSGLGR*AASVPS
Trigger: AGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACT...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: FKRSTDPPRSKALQGWPPSNLGT*SSRSSN
Trigger: GTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA...AGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLSNLGT*SSRSSN
Trigger: GTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACTGCTAACACAGAAATCATGCCTGAGTTTCCAGCCTGTGGGCCTGCCCTACAGGTGAGGGTGAAGTTCTaGCTGCTCAGGATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: TANTEIMPEFPACGPALQVRVKF*LLRILV
Trigger: CACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC...CTGTAGGGCAGGCCCACAGGCTGGAAACTCAGGCATGATTTCTGTGTTAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTGTGAGGGTGAAGTTCTaGCTGCTCAGGATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLVRVKF*LLRILV
Trigger: CACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGTGGGCAGGCGTaGGCAGGCAGAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FRNRELGKWFSPTICLQKGSGQA*AGRGSS
Trigger: GCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCC...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGCAGTGGTGGTCCTTCTaGCTGACGGAGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLQWWSF*LTEAKR
Trigger: CCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTG...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGTGGTGGGCCAGGTGTaGCAGTGGTGGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLVVGQV*QWWSFW
Trigger: CCAGAAGGACCACCACTGCCACACCTGGCCCACCAC...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTTCCTCTGCAGGTCTCTaGTCCAGTAGGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGISSAGL*SSREKA
Trigger: AGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGA...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGTCCTCTGCAGGTCTCTaGTCCAGTAGGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: KANTQAYTPTQAPLHRARSSAGL*SSREKA
Trigger: AGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGA...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTAGGCCGGGTAGGCTGGTaGCTGGAACAGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLGRVGW*LEQHLS
Trigger: ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCC...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTAGGCTCCCTGAACGGTaGGCCTGCAAGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKARLPER*ACKESR
Trigger: TCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCT...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCAAAGGGCTGCAGCGGTTaGTACGGGGTGTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPKGCSG*YGVWRD
Trigger: ATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTT...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAGCTGCTTCCATAGGTaGTGGCGAGGCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASSCFHR*WRGSAW
Trigger: CCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCT...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTAGCTGCTTCCATAGGTaGTGGCGAGGCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGEVLAAQDPRAVYLLQLSCFHR*WRGSAW
Trigger: CCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCT...AAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATATGTCAAAGCAGCCGGTaGGGAACATGTGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPICQSSR*GTCGSH
Trigger: GTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACA...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCTCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWASCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACCAGTGAGAAACTCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CSNLGTWSSRSSNLPVRNSCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...GTTTCTCACTGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643539.1
CDS-3UTR CCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGTACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGTTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTCTTGCCTATCAATGGTaGTATCAAACGCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: PRLFRDGLLLPHLAELSSLAYQW*YQTPMY
Trigger: GTACATGGGCGTTTGATACCACCATTGATAGGCAAG...AGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCGCTTGCCTATCAATaGTGGTATCAAACGCCCATG +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPSLAYQ*WYQTPM
Trigger: CATGGGCGTTTGATACCACCATTGATAGGCAAGCGA...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCACATCTCCAAGGCTTCCTCGTGAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCTAGTGTGACACGGTaGCAGAGTCTTATCCACACC +
Preference number: 4 (lower is better)
Translates to: PHLQGFLVRSGGGLSVKAASVTR*QSLIHT
Trigger: GGTGTGGATAAGACTCTGCCACCGTGTCACACTAGC...TGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGTATACACCCCTCCGCTaGCCTCTGTGTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLYTPLR*PLCAQG
Trigger: TCCCTGGGCACACAGAGGCCAGCGGAGGGGTGTATA...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGCACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGGCAACATATAATCAATaGTATCTTGCAAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: EHCPQPRPWRCQTHSWVWATYNQ*YLANCL
Trigger: GAGGCAGTTTGCAAGATACCATTGATTATATGTTGC...CCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTCTCCTGCTGGAAGCTaGGTAGGTAGAGGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: SAALERFTTFRSDSAADSSPAGS*VGRGQD
Trigger: GTCTTGCCCTCTACCTACCCAGCTTCCAGCAGGAGA...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCTGGAAGAAATACAAGTaGATCCCTCTGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPWKKYK*IPLAEG
Trigger: GCCTTCAGCCAGAGGGATCCACTTGTATTTCTTCCA...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCACTTTCCAGGCAATTCTaGGCCAGCTCCATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPLSRQF*ASSIPS
Trigger: GCTGGGGATGGAGCTGGCCCAGAATTGCCTGGAAAG...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGGCACTGGAGTGTTCCTaGGGCCTGAATGAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVALECS*GLNEPN
Trigger: ATTGGGCTCATTCAGGCCCCAGGAACACTCCAGTGC...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTAGTGGTAGCCTTCTaGGCACCCCTCCGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKALVVAF*APLRLA
Trigger: CGCAAGCCGGAGGGGTGCCCAGAAGGCTACCACTAG...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS-3UTR CCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTCTGGAGTGGAGGACTaGGGTGCCCCTCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: RGRRFSEECSRVRYVIECSGVED*GAPHPP
Trigger: GGGAGGATGAGGGGCACCCCAGTCCTCCACTCCAGA...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
3UTR CAA 72 bp GAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTC +
Preference number: 4 (lower is better)
Translates to: EVLAAQDPRAVY*LQLGDVVFPIL
Trigger: GAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCCGTTGTAGCGATCCATaGAGTGGTCCAGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AAQDPRAVYLLQLGDVVFRCSDP*SGPAGR
Trigger: TCTACCTGCTGGACCACTTCATGGATCGCTACAACG...GAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAGGTGGTCCTTCTGGCTaGCGGAGGCCAAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKGGPSG*RRPRGS
Trigger: ACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACC...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGTGTGATCTTGCAGGGTaGCCTCTAGGAAGTAATGGG +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLCDLAG*PLGSNG
Trigger: CCCATTACTTCCTAGAGGTCACCCTGCAAGATCACA...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCGGCTACGGCATCCTTaGGGACGTTGTCATACACTA +
Preference number: 4 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKRLRHP*GRCHTL
Trigger: TAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCG...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000644313.1
CDS-3UTR TCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTCGAGAGCAGGCTCCCTaGACGGTGGGCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCREQAP*TVGLQG
Trigger: TCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCG...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCCAAGGCTTCCTCGTaGGGTCTGGAGGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPSKASS*GLEVAY
Trigger: ATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGA...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCCAAGGCTTCCTCGTaGGGTCTGGAGGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLSKASS*GLEVAY
Trigger: ATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGA...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AGCTGCAATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SCNGHMHAKGCRDGHGTHKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...ATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGCTAAATACTGGCTTTTaGTCCAACCAGTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGLNTGF*SNQSLA
Trigger: GGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAG...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGTTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSLQESS*GPSRCR
Trigger: TCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAA...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTCCCAGTTCTGCTGGGTaGACAATGTGTCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: TTNERAASYASVTRWQSLPSSAG*TMCPPT
Trigger: GGTTGGGGGACACATTGTTCACCCAGCAGAACTGGG...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGCACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLHHLPI*LSSRQL
Trigger: CAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTG...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAACCTCCTATGCTAGTGTaGCACGGTGGCAGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: NGHMHAKGCRDGHGTHIQPPMLV*HGGRVL
Trigger: TAAGACTCTGCCACCGTGTCACACTAGCATAGGAGG...TTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCAAAAACAACAACAAATaGACGTGCAGCCTCCTATGC +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIKNNNK*TCSLLC
Trigger: GCATAGGAGGCTGCACGTTCATTTGTTGTTGTTTTT...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGGTCGTGCTGGCTGTaGGGGAACCCTCACAATCCC +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAGSCWL*GNPHNP
Trigger: GGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCC...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCGAATTTCCAGCCTGCTaGCATGCCCCACAAATTTTA +
Preference number: 4 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPEFPAC*HAPQIL
Trigger: TAAAATTTGTGGGGCATGTCAGCAGGCTGGAAATTC...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCGACAGAAGTCTTGAGTaGGACTCCCTTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AYTPTQAPLHRARERKAPDRSLE*DSLQGG
Trigger: TCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTC...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp CGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTGGCAGTCAGATTGCTTaGGCTCAGGAGTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: RAVYLLQLGDVVFPILELGSQIA*AQESET
Trigger: GGTCTCAGACTCCTGAGCTCAAGCAATCTGACTGCC...AAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp CTAGGACAAGAGGTGAGAGATCAAGAGCAGGTGACGTGTTTATTGTGGGACGCCTTCCTGGGGCCTGAATaGGCCCAATCTCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LGQEVRDQEQVTCLLWDAFLGPE*AQSLLS
Trigger: GGAAAGCAGAGATTGGGCTCATTCAGGCCCCAGGAA...GGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCACCTCTTGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTAGGTGGAGGTTGCAATaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLRWRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCATTGCAACCTCCACCT...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR TCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGCAGGAGAATTGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVSRRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCT...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR GCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTTGTGCCGGGCACCATTaGCAAGGCCTGGCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTCAGHH*QGLALD
Trigger: GTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACA...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTCACATATCCAAGGGCTaGAGCGGTTGGTACGGGGTG +
Preference number: 4 (lower is better)
Translates to: TTNERAASYASVTRWQSLHISKG*SGWYGV
Trigger: CACCCCGTACCAACCGCTGCAGCCCTTGGATATGTG...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTCACATATCCAAGGGCTaGAGCGGTTGGTACGGGGTG +
Preference number: 4 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCHISKG*SGWYGV
Trigger: CACCCCGTACCAACCGCTGCAGCCCTTGGATATGTG...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACCACATATCCAAGGGCTaGAGCGGTTGGTACGGGGTG +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHHISKG*SGWYGV
Trigger: CACCCCGTACCAACCGCTGCAGCCCTTGGATATGTG...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGCACATATCCAAGGGCTaGAGCGGTTGGTACGGGGTG +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLHISKG*SGWYGV
Trigger: CACCCCGTACCAACCGCTGCAGCCCTTGGATATGTG...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTATGCATGCTAAGGGATaGAGGGACGGGCACGGGACA +
Preference number: 4 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCMHAKG*RDGHGT
Trigger: TGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATATGCATGCTAAGGGATaGAGGGACGGGCACGGGACA +
Preference number: 4 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHMHAKG*RDGHGT
Trigger: TGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTATGCATGCTAAGGGATaGAGGGACGGGCACGGGACA +
Preference number: 4 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPMHAKG*RDGHGT
Trigger: TGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACATGCATGCTAAGGGATaGAGGGACGGGCACGGGACA +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHMHAKG*RDGHGT
Trigger: TGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCGCTGCAATGGCCATATaGATGCTAAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAAAMAI*MLRDAG
Trigger: CCCTGCATCCCTTAGCATGCATATGGCCATTGCAGC...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGTGGTGGCGAGGCAGTaGCTGGGCTCAGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKVVARQ*LGSAAM
Trigger: CATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCAC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTGMASC*LTWLSS
Trigger: AGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCC...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGGGATGGCCTCCTGCTaGCTCACTTGGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNGMASC*LTWLSS
Trigger: AGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCC...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PRLFRDGLLLPHLAELSSAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...AGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: EVWRWPICQSSRWGTCGSFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...GGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AGGACGTTGTCATACACTACCAGCAGGATTTCAATACACGTGCTGAGGTGCTCCGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 4 (lower is better)
Translates to: RTLSYTTSRISIHVLRCSDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...GGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTAGTGTATGACAACGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643539.1
CDS-3UTR GCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPSSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKESSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGTGCACCTCCCAGTTCTaGTGGGTGAACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVCTSQF*WVNNVS
Trigger: GGACACATTGTTCACCCAGCAGAACTGGGAGGTGCA...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCTCAGCAGCAGACAGCTaGCTTCCTGGCGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSSAADS*LPGGPC
Trigger: GCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGA...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACCTGCTCCCAGCTGCCTAACACAGAAATCATaGCTGAGTTTCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SNLGTWSSRSSNLPAPSCLTQKS*LSFQPV
Trigger: CACAGGCTGGAAACTCAGGCATGATTTCTGTGTTAG...GCAGCTGGGAGCAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGCTTCTCGGCAAGCCTTaGAGCAGCCCACTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQLLGKP*SSPLGG
Trigger: CCCACCGAGTGGGCTGCTGCAAGGCTTGCCGAGAAG...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAGCAAGCCAGGGTTaGTCCCTTCTCGGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPSASQG*SLLGKP
Trigger: AGGCTTGCCGAGAAGGGAGCAACCCTGGCTTGCTGA...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp CATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGGTAACCACCACAGGCTaGTCCACAGTAGATACAACA +
Preference number: 4 (lower is better)
Translates to: HMHAKGCRDGHGTHIQGLVTTTG*STVDTT
Trigger: TGTTGTATCTACTGTGGAGCAGCCTGTGGTGGTTAC...CAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCATCCTCGAACTTACCTaGTCCCAGCTGCAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAILELT*SQLQVP
Trigger: AGGCACTTGCAGCTGGGAGCAGGTAAGTTCGAGGAT...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGSNLGT*SSRSSN
Trigger: GTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGA...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGAAGTGGGCAGGCGTaGGCAGGCAGAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKGSGQA*AGRGSS
Trigger: GCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCC...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCAGTGGTGGTCCTTCTaGCTGACGGAGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKAQWWSF*LTEAKR
Trigger: CCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTG...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTCAGGTGTGGCAGTGGTaGTCCTTCTGGCTGACGGAG +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTQVWQW*SFWLTE
Trigger: CTCCGTCAGCCAGAAGGACCACCACTGCCACACCTG...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGTGGTGGGCCAGGTGTaGCAGTGGTGGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAVVGQV*QWWSFW
Trigger: CCAGAAGGACCACCACTGCCACACCTGGCCCACCAC...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCTCTTGCGGGGGCAGGTaGTGGGCCAGGTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSSCGGR*WARCGS
Trigger: ACTGCCACACCTGGCCCACCACCTGCCCCCGCAAGA...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTTCCTCTGCAGGTCTCTaGTCCAGTAGGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLSSAGL*SSREKA
Trigger: AGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGA...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGTCCTGCACGGGGGTCTaGAACTGTGCCAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWSCTGV*NCARVV
Trigger: GACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGA...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGAAGGGCTGCAGCGGTTaGTACGGGGTGTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKKGCSG*YGVWRD
Trigger: ATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTT...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTAAGGGCTGCAGCGGTTaGTACGGGGTGTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKAKGCSG*YGVWRD
Trigger: ATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTT...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACAAGGGCTGCAGCGGTTaGTACGGGGTGTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYKGCSG*YGVWRD
Trigger: ATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTT...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGTGGCGAGGCAGTGCCTaGGCTCAGCTGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWWRGSA*AQLQWP
Trigger: TGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCA...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAATACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKEYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACGGTGGGCCTGCATTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 4 (lower is better)
Translates to: GGMSLYSPRAGSLNGGPAFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...TGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGTTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 4 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTTTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGILTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGTTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCCAAGGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 4 (lower is better)
Translates to: AKAWLLTATASLRTLSYTKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGISGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGGTCCCGATGTCCCCCTCCATGCTGGTTCTCTGTCACAGGTCCAATTCTTGGATCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RSRCPPPCWFSVTGPILGSGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...TCCAAGAATTGGACCTGTGACAGAGAACCAGCATGGAGGGGGACATCGGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 4 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKETASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCTGTGGTGGAGAGAGGTaGGAACTGTTTAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTICGGER*ELFKSL
Trigger: CAAAGATTTAAACAGTTCCCACCTCTCTCCACCACA...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGTGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLCPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTGAAGTAGCTGCTTCCTCGCTTGCCTATCAATaGTGGTATCAAACGCCCATG +
Preference number: 4 (lower is better)
Translates to: SVKAAGGEHVAPTEVAASSLAYQ*WYQTPM
Trigger: CATGGGCGTTTGATACCACCATTGATAGGCAAGCGA...GGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCGATTTTCAGCTGCTCTaGAAAGATTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPDFQLL*KDSPPS
Trigger: GGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATC...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTGATTTTCAGCTGCTCTaGAAAGATTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFDFQLL*KDSPPS
Trigger: GGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATC...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACACCTCAGCCCCGCCCTTaGCGGTGTCAAACACACTCC +
Preference number: 4 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTPQPRP*RCQTHS
Trigger: GGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGG...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGGCTTCCAGGAGGATaGCGCCTGCTTGTGCTCACC +
Preference number: 4 (lower is better)
Translates to: TRGRRFSEECSRVRYVIEWLPGG*RLLVLT
Trigger: GGTGAGCACAAGCAGGCGCCATCCTCCTGGAAGCCA...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCATGTCCCCCTCCATGCTaGTTCTCTGTCACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPCPPPC*FSVTGP
Trigger: TGGACCTGTGACAGAGAACCAGCATGGAGGGGGACA...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CCA 90 bp CCACATCTCCAAGGCTTCCTCGTGAGGTCTGGAGGTGGCCTATCTGTCAAAGCAACAGTGTGTGCCTACTaGGAATGGCTCTGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PHLQGFLVRSGGGLSVKATVCAY*EWLCPV
Trigger: AACAGGACAGAGCCATTCCCAGTAGGCACACACTGT...TGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp CTAGGACAAGAGGTGAGAGATCAAGAGCAGGTGACGTGTTTATTGTGGGACGCCAGGTGGAAGGGGAACTaGACAGTGTGTGCCTACTGG +
Preference number: 4 (lower is better)
Translates to: LGQEVRDQEQVTCLLWDARWKGN*TVCAYW
Trigger: CCAGTAGGCACACACTGTCCAGTTCCCCTTCCACCT...GGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCACCTCTTGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 72 bp GTGAGGTGGGTGCTCTTGGTCAACCCAAGACTTGCCTaGTCTCTGAATCCCCAAAACTTAGAGCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VRWVLLVNPRLA*SLNPQNLELPA
Trigger: GGCAGGAAGCTCTAAGTTTTGGGGATTCAGAGACAAGGCAAGTCTTGGGTTGACCAAGAGCACCCACCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CAA 72 bp AGAGGGAGGGATTTGTCCAAAGTGAGGTGGGTGCTCTaGGTCAACCCAAGACTTGCCTTGTCTCTGAATCCC +
Preference number: 4 (lower is better)
Translates to: RGRDLSKVRWVL*VNPRLALSLNP
Trigger: GGGATTCAGAGACAAGGCAAGTCTTGGGTTGACCAAGAGCACCCACCTCACTTTGGACAAATCCCTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CAA 72 bp CTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGATCCTCGAACTTACCT +
Preference number: 4 (lower is better)
Translates to: LLRILVLFICSN*GTWSSRSSNLP
Trigger: AGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 72 bp TGTGTGCCTACTGGGAATGGCTCTGTCCTGTTTGCCTaGCTCCCTGCAGTAACTATGGGGCACATTTACCTC +
Preference number: 4 (lower is better)
Translates to: CVPTGNGSVLFA*LPAVTMGHIYL
Trigger: GAGGTAAATGTGCCCCATAGTTACTGCAGGGAGCAAGGCAAACAGGACAGAGCCATTCCCAGTAGGCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 72 bp CTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGATCCTCGAACTTACCA +
Preference number: 4 (lower is better)
Translates to: LLRILVLFICSN*GTWSSRSSNLP
Trigger: TGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR CAA 72 bp GCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTaGTCATACACTACCAGCAGGATTTCAATACACGTG +
Preference number: 4 (lower is better)
Translates to: AWLLTATASLRT*SYTTSRISIHV
Trigger: CACGTGTATTGAAATCCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643539.1
3UTR CAA 72 bp ATTGCCAAGGCCTGGCTCTTGACGGCTACGGCATCCTaGAGGACGTTGTCATACACTACCAGCAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: IAKAWLLTATAS*RTLSYTTSRIS
Trigger: TGAAATCCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643539.1
CDS-3UTR TCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACGGTGGTCCTTCTGGCTaGCGGAGGCCAAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNGGPSG*RRPRGS
Trigger: ACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACC...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGGTGGTCCTTCTGGCTaGCGGAGGCCAAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQGGPSG*RRPRGS
Trigger: ACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACC...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGTGTGATCTTGCAGGGTaGCCTCTAGGAAGTAATGGG +
Preference number: 4 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKCDLAG*PLGSNG
Trigger: CCCATTACTTCCTAGAGGTCACCCTGCAAGATCACA...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGCTCCAGGGAATAGCTTaGGATCCTCTGCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKLQGIA*DPLQVS
Trigger: AGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAG...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCATTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGC +
Preference number: 4 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPFQYTC*GAPGNS
Trigger: GCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAA...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATACGGCTACGGCATCCTTaGGGACGTTGTCATACACTA +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIRLRHP*GRCHTL
Trigger: TAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCG...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000644313.1
CDS-3UTR TCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTTCCAAGGCTTCCTCGTaGGGTCTGGAGGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTSKASS*GLEVAY
Trigger: ATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGA...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTCCAAGGCTTCCTCGTaGGGTCTGGAGGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: RGRRFSEECSRVRYVIECSKASS*GLEVAY
Trigger: ATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGA...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTCTAAATACTGGCTTTTaGTCCAACCAGTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGILNTGF*SNQSLA
Trigger: GGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAG...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTCCCAGTTCTGCTGGGTaGACAATGTGTCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: RGRRFSEECSRVRYVIECPSSAG*TMCPPT
Trigger: GGTTGGGGGACACATTGTTCACCCAGCAGAACTGGG...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTGGGTCGTGCTGGCTGTaGGGGAACCCTCACAATCCC +
Preference number: 4 (lower is better)
Translates to: RPLREAAAHDISKRLKMVGSCWL*GNPHNP
Trigger: GGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCC...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGGCAAGACAGAAGTCTTaGGTGAGACTCCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVARQKS*VRLPSR
Trigger: CCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGC...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGCACACAGCGGGTGGTaGGCACTGCCCTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKAHSGW*ALPSAP
Trigger: CGGGGCTGAGGGCAGTGCTCACCACCCGCTGTGTGC...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCAGCAGGAGAATTGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RVFLRALSLQIPKYWLLISRRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCT...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR TCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTAAGCACTTTGGGAAGCTaGGGTGGGTGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLSTLGS*GGWIMR
Trigger: CCTCATGATCCACCCACCTCAGCTTCCCAAAGTGCT...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTGCCAAGCATAGGTCCTaGACGGGGGTCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKAAKHRS*TGVWNC
Trigger: ACAGTTCCAGACCCCCGTGCAGGACCTATGCTTGGC...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTATGCATGCTAAGGGATaGAGGGACGGGCACGGGACA +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTMHAKG*RDGHGT
Trigger: TGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGGTGGTGGCGAGGCAGTaGCTGGGCTCAGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKVVARQ*LGSAAM
Trigger: CATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCAC...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACTCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAATCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FRNRELGKWFSPTICLQKSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGAGAACACGCCAGGCTaGCCCTCCTTTTTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNENTPG*PSFFSG
Trigger: ACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTC...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATACAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACCAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 4 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKSSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGSSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCTGCACCTCCCAGTTCTaGTGGGTGAACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: RVFLRALSLQIPKYWLLICTSQF*WVNNVS
Trigger: GGACACATTGTTCACCCAGCAGAACTGGGAGGTGCA...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCAGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGAGCGAAACTCCGTTTaGAAGCAGGAGGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: DVESSGTESWENGSLQPYERNSV*KQEAGD
Trigger: GTCTCCTGCCTCCTGCTTGCAAACGGAGTTTCGCTC...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR GCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATCACACCTCCAGCTCCTaGCCCCGATTTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNHTSSS*PRFPDS
Trigger: GGAATCTGGAAATCGGGGGCAGGAGCTGGAGGTGTG...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQFRSGE*ARKVGS
Trigger: GCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAA...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCTCTGCAGGTCTCTaGTCCAGTAGGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHSSAGL*SSREKA
Trigger: AGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGA...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGACCATTGCCAAGGCCTaGCTCTTGACGGCTACGGCA +
Preference number: 4 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLTIAKA*LLTATA
Trigger: TGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGT...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGCCGGGTAGGCTGGTaGCTGGAACAGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAGRVGW*LEQHLS
Trigger: ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCC...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGGCCGGGTAGGCTGGTaGCTGGAACAGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKGRVGW*LEQHLS
Trigger: ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTGGTTGGTACGGGGTGTaGAGGGATGAGCCTGTACTC +
Preference number: 4 (lower is better)
Translates to: RGRRFSEECSRVRYVIECGWYGV*RDEPVL
Trigger: GAGTACAGGCTCATCCCTCCACACCCCGTACCAACC...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGGGTTGGTACGGGGTGTaGAGGGATGAGCCTGTACTC +
Preference number: 4 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKGWYGV*RDEPVL
Trigger: GAGTACAGGCTCATCCCTCCACACCCCGTACCAACC...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAATGCTTCCATAGGTGGTaGCGAGGCAGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKCFHRW*RGSAWA
Trigger: AGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCA...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTACGTGAGGTCTGGAGGTaGCCTATCTGTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLREVWR*PICQSS
Trigger: GCTGCTTTGACAGATAGGCCACCTCCAGACCTCACG...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTCGTGAGGTCTGGAGGTaGCCTATCTGTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPREVWR*PICQSS
Trigger: GCTGCTTTGACAGATAGGCCACCTCCAGACCTCACG...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: MLEISGLCPVPTLLASYQEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: SAALERFTTFRSDSAADSLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWASGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPITASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 4 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGTASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 4 (lower is better)
Translates to: VKFWLLRILVLFICSNLGTASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...CCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCTCGCTTGCCTATCAATaGTGGTATCAAACGCCCATG +
Preference number: 4 (lower is better)
Translates to: AYTPTQAPLHRARERKAPSLAYQ*WYQTPM
Trigger: CATGGGCGTTTGATACCACCATTGATAGGCAAGCGA...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCTCTCTGGGGTGGTTCTCCTGCTGGAAGCTGGGTAGGTAGAGGGCAAGACAGACAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 4 (lower is better)
Translates to: ALWGGSPAGSWVGRGQDRQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...TCTGTCTTGCCCTCTACCTACCCAGCTTCCAGCAGGAGAACCACCCCAGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTCTGGCCAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 4 (lower is better)
Translates to: GLALDGYGILEDVVIHSGQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...GCCAGAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCACCTCCCAGTTCTGCTaGGTGAACAATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASTSQFC*VNNVSP
Trigger: GGGGGACACATTGTTCACCCAGCAGAACTGGGAGGT...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCAACCTCCCAGTTCTGCTaGGTGAACAATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPTSQFC*VNNVSP
Trigger: GGGGGACACATTGTTCACCCAGCAGAACTGGGAGGT...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATCACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: DVESSGTESWENGSLQPYHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCGCTAGTGTGACACGGTaGCAGAGTCTTATCCACACC +
Preference number: 4 (lower is better)
Translates to: RVFLRALSLQIPKYWLLIASVTR*QSLIHT
Trigger: GGTGTGGATAAGACTCTGCCACCGTGTCACACTAGC...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACTCTCCTGCTGGAAGCTaGGTAGGTAGAGGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHSPAGS*VGRGQD
Trigger: GTCTTGCCCTCTACCTACCCAGCTTCCAGCAGGAGA...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTCTCCATAGTAACAGATaGAGAAATGGAAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLLHSNR*RNGSPK
Trigger: CTTTGGGCTTCCATTTCTCCATCTGTTACTATGGAG...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGTGGGCTCGGAAGGTaGGCAGCTTCAGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVSGLGR*AASVLF
Trigger: AAAAAGAACTGAAGCTGCCCACCTTCCGAGCCCACT...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541762.5
CDS-3UTR CCA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGCCCTTGCAGAGGCTGTaGCGCTTAGGGGAGCTTACT +
Preference number: 4 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKPLQRL*RLGELT
Trigger: AGTAAGCTCCCCTAAGCGCCACAGCCTCTGCAAGGG...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAATGTGATCTTGCAGGGTaGCCTCTAGGAAGTAATGGG +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQCDLAG*PLGSNG
Trigger: CCCATTACTTCCTAGAGGTCACCCTGCAAGATCACA...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTACTCCAGGGAATAGCTTaGGATCCTCTGCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLLQGIA*DPLQVS
Trigger: AGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAG...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTACGGCTACGGCATCCTTaGGGACGTTGTCATACACTA +
Preference number: 4 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLRLRHP*GRCHTL
Trigger: TAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCG...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000644313.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGACATGTGGCTCCCACTaGAGTAGCTGCTTCCATAGG +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLTCGSH*SSCFHR
Trigger: CCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGT...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACACATGTGGCTCCCACTaGAGTAGCTGCTTCCATAGG +
Preference number: 4 (lower is better)
Translates to: GKTEVLSETPFKEEYESDTCGSH*SSCFHR
Trigger: CCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGT...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATTCCAAGGCTTCCTCGTaGGGTCTGGAGGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNSKASS*GLEVAY
Trigger: ATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGA...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGTTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLLQESS*GPSRCR
Trigger: TCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAA...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAACACCACCTTCCGATCTaGCTCAGCAGCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: FRNRELGKWFSPTICLQKHHLPI*LSSRQL
Trigger: CAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTG...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACCCTCCTATGCTAGTGTaGCACGGTGGCAGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHPPMLV*HGGRVL
Trigger: TAAGACTCTGCCACCGTGTCACACTAGCATAGGAGG...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTACAGATACAAGAACTTaGATCCAAACTGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLTDTRT*IQTACT
Trigger: TGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGT...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTAAAACCCTGAGACGGTaGTGGAGCTGGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKAKTLRR*WSWGVK
Trigger: CTTGACACCCCAGCTCCATCACCGTCTCAGGGTTTT...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTCACAGAAATCATGCCTaGGTTTCCAGCCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTHRNHA*VSSLWA
Trigger: GGCCCACAGGCTGGAAACTCAGGCATGATTTCTGTG...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAGACAGAAGTCTTGAGTaGGACTCCCTTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIDRSLE*DSLQGG
Trigger: TCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTC...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGGGATTTGTCCAAAGTaGGGTGGGTGCTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: DVESSGTESWENGSLQPYGICPK*GGCSWS
Trigger: TGACCAAGAGCACCCACCTCACTTTGGACAAATCCC...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCGGGATTTGTCCAAAGTaGGGTGGGTGCTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASGICPK*GGCSWS
Trigger: TGACCAAGAGCACCCACCTCACTTTGGACAAATCCC...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGTGGATCCCTCTGGCTaGAGGCCACAGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCVDPSG*RPQRSQ
Trigger: CTGTGACCTCTGTGGCCTTCAGCCAGAGGGATCCAC...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCCTCTGAATTTAACCTaGTGCCAGCCCTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHPLNLT*CQPWEE
Trigger: TTCCTCCCAGGGCTGGCATCAGGTTAAATTCAGAGG...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATCGGCTACGGCATCCTTaGGGACGTTGTCATACACTC +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNRLRHP*GRCHTL
Trigger: GAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCG...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGGAGGTTGCAATGAGCTaGGATCATGCCACTGCACTT +
Preference number: 4 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSEVAMS*DHATAL
Trigger: AAGTGCAGTGGCATGATCTCAGCTCATTGCAACCTC...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR GCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSLVLFI*SNLGTW
Trigger: CCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAG...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTGCCAAGCATAGGTCCTaGACGGGGGTCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGAKHRS*TGVWNC
Trigger: ACAGTTCCAGACCCCCGTGCAGGACCTATGCTTGGC...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACATGCATGCTAAGGGATaGAGGGACGGGCACGGGACA +
Preference number: 4 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNMHAKG*RDGHGT
Trigger: TGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGCTGCAATGGCCATATaGATGCTAAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: MLEISGLCPVPTLLASYQAAMAI*MLRDAG
Trigger: CCCTGCATCCCTTAGCATGCATATGGCCATTGCAGC...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: SAALERFTTFRSDSAADSRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACCAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: GKTEVLSETPFKEEYESDQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGCAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGCCACCCACTGTaGCTCGCAAGGCAAACACTC +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWDSHPL*LARQTL
Trigger: GAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTC...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ATGGGAGTGCCCAAGGGTGGAAGAAATACAAGTGGATCCCTCTGGCTGAAGGCCATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: MGVPKGGRNTSGSLWLKAIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...GGCCTTCAGCCAGAGGGATCCACTTGTATTTCTTCCACCCTTGGGCACTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: AYTPTQAPLHRARERKAPIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCTGCACCTCCCAGTTCTaGTGGGTGAACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASCTSQF*WVNNVS
Trigger: GGACACATTGTTCACCCAGCAGAACTGGGAGGTGCA...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: PRLFRDGLLLPHLAELSSKQNKN*FHGPLH
Trigger: GTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTT...AGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGCTCCCGAGGTCTTGCTaGTGCCCCCAATATTCCACC +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPALPRSC*CPQYST
Trigger: GGTGGAATATTGGGGGCAGCAGCAAGACCTCGGGAG...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAACAGCTCCCGAGGTCTTaGTGCTGCCCCCAATATTCC +
Preference number: 4 (lower is better)
Translates to: FRNRELGKWFSPTICLQKQLPRS*CCPQYS
Trigger: GGAATATTGGGGGCAGCAGCAAGACCTCGGGAGCTG...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAACAGCTCCCGAGGTCTTaGTGCTGCCCCCAATATTCC +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKQLPRS*CCPQYS
Trigger: GGAATATTGGGGGCAGCAGCAAGACCTCGGGAGCTG...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAAGAGGTTGGGTCAACTaGCTTCCAACAGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPRGWVN*LPTAGK
Trigger: CTTACCAGCTGTTGGAAGGCAGTTGACCCAACCTCT...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGAGAAGCTGGCTAAAGTaGAGATTCCAGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLRSWLK*RFQVPT
Trigger: GGTGGGGACCTGGAATCTGCACTTTAGCCAGCTTCT...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGAACTGGACAGTGTGTaGCTACTGGGAATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DVESSGTESWENGSLQPYELDSV*LLGMAL
Trigger: CAGAGCCATTCCCAGTAGGCACACACTGTCCAGTTC...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVFRSGE*ARKVGS
Trigger: GCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAA...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGAGGGTGAAGTTCTaGCTGCTCAGGATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNVRVKF*LLRILV
Trigger: CACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGAGGAAGTGGGCAGGCGTaGGCAGGCAGAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGGSGQA*AGRGSS
Trigger: GCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCC...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTCAGGTGTGGCAGTGGTaGTCCTTCTGGCTGACGGAG +
Preference number: 4 (lower is better)
Translates to: RPLREAAAHDISKRLKMVQVWQW*SFWLTE
Trigger: CTCCGTCAGCCAGAAGGACCACCACTGCCACACCTG...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTCAGGTGTGGCAGTGGTaGTCCTTCTGGCTGACGGAG +
Preference number: 4 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCQVWQW*SFWLTE
Trigger: CTCCGTCAGCCAGAAGGACCACCACTGCCACACCTG...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGACCATTGCCAAGGCCTaGCTCTTGACGGCTACGGCA +
Preference number: 4 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQTIAKA*LLTATA
Trigger: TGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGT...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGGGCCGGGTAGGCTGGTaGCTGGAACAGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKGRVGW*LEQHLS
Trigger: ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCC...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGTTGGTACGGGGTGTaGAGGGATGAGCCTGTACTC +
Preference number: 4 (lower is better)
Translates to: FRNRELGKWFSPTICLQKGWYGV*RDEPVL
Trigger: GAGTACAGGCTCATCCCTCCACACCCCGTACCAACC...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTTGGCGAGGCAGTGCCTaGGCTCAGCTGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVWRGSA*AQLQWP
Trigger: TGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCA...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAATGCTTCCATAGGTGGTaGCGAGGCAGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKCFHRW*RGSAWA
Trigger: AGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCA...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTAGCTGCTTCCATAGGTaGTGGCGAGGCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EECSRVRYVIECFALGQFSCFHR*WRGSAW
Trigger: CCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCT...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCAGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAATTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 4 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCTCCTAGAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTTGAAAACCTCAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 4 (lower is better)
Translates to: PPREGSRSFCSLLRLENLKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTCTAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTCTTGCCTATCAATGGTaGTATCAAACGCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGILAYQW*YQTPMY
Trigger: GTACATGGGCGTTTGATACCACCATTGATAGGCAAG...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGCTTGCCTATCAATGGTaGTATCAAACGCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLLAYQW*YQTPMY
Trigger: GTACATGGGCGTTTGATACCACCATTGATAGGCAAG...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTTCGCTTGCCTATCAATaGTGGTATCAAACGCCCATG +
Preference number: 4 (lower is better)
Translates to: FKRSTDPPRSKALQGWPPSLAYQ*WYQTPM
Trigger: CATGGGCGTTTGATACCACCATTGATAGGCAAGCGA...AGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAACCTCCCAGTTCTGCTaGGTGAACAATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKTSQFC*VNNVSP
Trigger: GGGGGACACATTGTTCACCCAGCAGAACTGGGAGGT...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTACCTCCCAGTTCTGCTaGGTGAACAATGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTTSQFC*VNNVSP
Trigger: GGGGGACACATTGTTCACCCAGCAGAACTGGGAGGT...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKAHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACGCTAGTGTGACACGGTaGCAGAGTCTTATCCACACC +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHASVTR*QSLIHT
Trigger: GGTGTGGATAAGACTCTGCCACCGTGTCACACTAGC...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGTCCTACTGGTTTCTTTaGAAAAACCCTGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLSYWFL*KNPETV
Trigger: CACCGTCTCAGGGTTTTTCCAAAGAAACCAGTAGGA...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCACCATATATATCCTACTaGTTTCTTTGGAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPPYISY*FLWKNP
Trigger: AGGGTTTTTCCAAAGAAACCAGTAGGATATATATGG...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGACCGGCTCTCTGGGGTaGTTCTCCTGCTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQTGSLG*FSCWKL
Trigger: CAGCTTCCAGCAGGAGAACCACCCCAGAGAGCCGGT...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCCCTGTGTGGGGGAGCTGTCCTCCAGCATaGGAATTAACACAATCTTAC +
Preference number: 4 (lower is better)
Translates to: LSWPLIKSFSIHWAPVWGSCPPA*ELTQSY
Trigger: GTAAGATTGTGTTAATTCCCATGCTGGAGGACAGCT...CCCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTTGCCTTCCCATCCCCTaGCACTGGAGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RPLREAAAHDISKRLKMVCLPIP*HWSVPG
Trigger: CCCAGGAACACTCCAGTGCCAGGGGATGGGAAGGCA...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAACGTTGTCATACACTCTaGCTTCCAGGAGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKRCHTL*LPGGWR
Trigger: GCGCCATCCTCCTGGAAGCCAGAGTGTATGACAACG...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
3UTR CAA 72 bp GGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCCCTCATGTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GYLRVHHKLGSN*GSKLTALMWDR
Trigger: CCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CAA 72 bp AGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGCCTATCAATGGTGGTA +
Preference number: 4 (lower is better)
Translates to: RALSLQIPKYWL*IQPVACLSMVV
Trigger: TACCACCATTGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CAA 72 bp GAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTaGAAAACCTCTGAATTTAACCTGATGCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: EKAPGHSAACSG*KTSEFNLMPAL
Trigger: CAGGGCTGGCATCAGGTTAAATTCAGAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
3UTR CAA 72 bp CTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGATCCTCGAACTTACTT +
Preference number: 4 (lower is better)
Translates to: LLRILVLFICSN*GTWSSRSSNLL
Trigger: AAGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR TCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTCGTTGTAGCGATCCATaGAGTGGTCCAGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RGRRFSEECSRVRYVIECRCSDP*SGPAGR
Trigger: TCTACCTGCTGGACCACTTCATGGATCGCTACAACG...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCACGTTGTAGCGATCCATaGAGTGGTCCAGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSRCSDP*SGPAGR
Trigger: TCTACCTGCTGGACCACTTCATGGATCGCTACAACG...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATAATGGGCATACTCCTTaGGGCACTCTTTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHNGHTP*GTLWSC
Trigger: GCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATT...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAATGGGCATACTCCTTaGGGCACTCTTTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASNGHTP*GTLWSC
Trigger: GCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATT...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCTTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGC +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASFQYTC*GAPGNS
Trigger: GCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAA...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: TQAYTPTQAPLHRARERKKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
50% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACTTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNLQESS*GPSRCR
Trigger: TCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAA...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCCCAGTTCTGCTGGGTaGACAATGTGTCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQPSSAG*TMCPPT
Trigger: GGTTGGGGGACACATTGTTCACCCAGCAGAACTGGG...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACGAGATCAAGAGCAGGTaGCGTGTTTATTGTGGGACG +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHEIKSR*RVYCGT
Trigger: CGTCCCACAATAAACACGTCACCTGCTCTTGATCTC...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000644926.1
CDS-3UTR TCA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGAATCATATGCCTGAATaGCCAAGAAGCTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: KANTQAYTPTQAPLHRARNHMPE*PRSWLK
Trigger: CTTTAGCCAGCTTCTTGGTCATTCAGGCATATGATT...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCCAGAGCTCTGGTCTTTaGTGCAGAGGAGTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASQSSGL*CRGVCK
Trigger: CTTGCAAACTCCTCTGCATCAAAGACCAGAGCTCTG...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp GCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCTCTTCTCTGACACACTaGACATTTCCTCCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: AAQDPRAVYLLQLGDVVFSSLTH*TFPPQD
Trigger: ATCTTGGGGAGGAAATGTTCAGTGTGTCAGAGAAGA...GAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHLVLFI*SNLGTW
Trigger: CCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAG...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCTGCTCAGGATCCTCGTaGTGTTTATTTGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACCSGSS*CLFAPT
Trigger: AGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGGCCAAGCATAGGTCCTaGACGGGGGTCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQAKHRS*TGVWNC
Trigger: ACAGTTCCAGACCCCCGTGCAGGACCTATGCTTGGC...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACCGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: KANTQAYTPTQAPLHRARFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKAQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLSSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTCCTAGAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTTGAAAACCTCACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PPREGSRSFCSLLRLENLTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTCTAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SAALERFTTFRSDSAADSTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTCCAAGACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: PPRRGIFRNRELGKWFSPIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...TGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTCTTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCGCTGAGATTTTCAGCTaGTCTGGAAAGATTCACCAC +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAAEIFS*SGKIHH
Trigger: GTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTCGGCCCAAGAGGGGATaGCTAGGACAAGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: RPLREAAAHDISKRLKMVRPKRG*LGQEVR
Trigger: TCTCACCTCTTGTCCTAGGCATCCCCTCTTGGGCCG...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGAATCTTACATGGGAGTaGCCAAGGGTGGAAGAAATA +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLNLTWE*PRVEEI
Trigger: TATTTCTTCCACCCTTGGGCACTCCCATGTAAGATT...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCGGTCATTCTGCAGCTTaGTCAGGCTTGAAAACCTCT +
Preference number: 4 (lower is better)
Translates to: RVFLRALSLQIPKYWLLIGHSAA*SGLKTS
Trigger: AGAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACC...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTCAGGAGGATGGCGCCTaGTTGTGCTCACCAATGCCT +
Preference number: 4 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCQEDGA*LCSPMP
Trigger: AGGCATTGGTGAGCACAAGCAGGCGCCATCCTCCTG...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTAGCCCGCTTCTCCCTTaGTGCCTGACTTTAAAGATG +
Preference number: 4 (lower is better)
Translates to: EGEVLAAQDPRAVYLLQLSPLLP*CLTLKM
Trigger: CATCTTTAAAGTCAGGCAGCAAGGGAGAAGCGGGCT...AAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACAAGTGGGCTCGGAAGGTaGGCAGCTTCAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTSGLGR*AASVPS
Trigger: AGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACT...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACAGTGGGCTCGGAAGGTaGGCAGCTTCAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNSGLGR*AASVPS
Trigger: AGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACT...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAATTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQLFAPT*GRGLPD
Trigger: ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAA...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGTGAGGGTGAAGTTCTaGCTGCTCAGGATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAVRVKF*LLRILV
Trigger: CACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGTGAGGGTGAAGTTCTaGCTGCTCAGGATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWVRVKF*LLRILV
Trigger: CACGAGGATCCTGAGCAGCCAGAACTTCACCCTCAC...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTCAGGTGTGGCAGTGGTaGTCCTTCTGGCTGACGGAG +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVQVWQW*SFWLTE
Trigger: CTCCGTCAGCCAGAAGGACCACCACTGCCACACCTG...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCATCCTCTGCAGGTCTCTaGTCCAGTAGGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSSSAGL*SSREKA
Trigger: AGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGA...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTACCATTGCCAAGGCCTaGCTCTTGACGGCTACGGCA +
Preference number: 4 (lower is better)
Translates to: EECSRVRYVIECFALGQFTIAKA*LLTATA
Trigger: TGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGT...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTGGAATCTTAAGGGCTGCAGCGGTTaGTACGGGGTGTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: WVVIKVLVVNTASKTWNLKGCSG*YGVWRD
Trigger: ATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTT...AAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTAAGGGCTGCAGCGGTTaGTACGGGGTGTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVKGCSG*YGVWRD
Trigger: ATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTT...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGTGTCAAAGCAGCCGGTaGGGAACATGTGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQCQSSR*GTCGSH
Trigger: GTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACA...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGCGTGAGGTCTGGAGGTaGCCTATCTGTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWREVWR*PICQSS
Trigger: GCTGCTTTGACAGATAGGCCACCTCCAGACCTCACG...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGTCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWSCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTAGGACAAGAGGTGAGAGATCAAGAGCAGGTGACGTGTTTATTGTGGGACGCCGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LGQEVRDQEQVTCLLWDAGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...GGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCACCTCTTGTCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATACGAGAGCTGGGAAAATaGTTCTCTCCAACCATATGC +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIRELGK*FSPTIC
Trigger: GCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCG...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGTGTGGTGGAGAGAGGTaGGAACTGTTTAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: KANTQAYTPTQAPLHRARCGGER*ELFKSL
Trigger: CAAAGATTTAAACAGTTCCCACCTCTCTCCACCACA...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATTGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHCPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLTQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATCACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCGATTTTCAGCTGCTCTaGAAAGATTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWADFQLL*KDSPPS
Trigger: GGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATC...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTGCTAGTGTGACACGGTaGCAGAGTCTTATCCACACC +
Preference number: 4 (lower is better)
Translates to: RGRRFSEECSRVRYVIECASVTR*QSLIHT
Trigger: GGTGTGGATAAGACTCTGCCACCGTGTCACACTAGC...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCAGTTTATGTGGCAGCTTaGCTAGGCTACAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPVYVAA*LGYSAC
Trigger: ACAGGCACTGTAGCCTAGCCAAGCTGCCACATAAAC...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTCAAAATAGGAAGAACTaGTTCTCGAAACCCCACTTC +
Preference number: 4 (lower is better)
Translates to: PCHSLQDWQGAKESKTGIQNRKN*FSKPHF
Trigger: GAAGTGGGGTTTCGAGAACCAGTTCTTCCTATTTTG...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAACTTAGGGGAGCTTACTaGCTAAGAGGTCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: TQAYTPTQAPLHRARERKLRGAY*LRGQLC
Trigger: ACAAAGCTGACCTCTTAGCCAGTAAGCTCCCCTAAG...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 72 bp AGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RKLCGYLRVHHK*GSNLGSKLTAL
Trigger: GAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATCTCCAGGGAATAGCTTaGGATCCTCTGCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNLQGIA*DPLQVS
Trigger: AGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAG...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACTTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGC +
Preference number: 4 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYFQYTC*GAPGNS
Trigger: GCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAA...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTGGAATCTTTCCAAGGCTTCCTCGTaGGGTCTGGAGGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: WVVIKVLVVNTASKTWNLSKASS*GLEVAY
Trigger: ATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGA...AAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GKTEVLSETPFKEEYESDKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: MLEISGLCPVPTLLASYQKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTTTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RPLREAAAHDISKRLKMVLQESS*GPSRCR
Trigger: TCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAA...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGTTACAAGAGTCTTCCTaGGGGCCCTCTCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQLQESS*GPSRCR
Trigger: TCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAA...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGAACCAAAGAACATGCTaGGCACAAGCTGCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLNQRTC*AQAASQ
Trigger: CTGACTCGCAGCTTGTGCTCAGCATGTTCTTTGGTT...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTAACCAAAGAACATGCTaGGCACAAGCTGCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTNQRTC*AQAASQ
Trigger: CTGACTCGCAGCTTGTGCTCAGCATGTTCTTTGGTT...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACAACCAAAGAACATGCTaGGCACAAGCTGCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYNQRTC*AQAASQ
Trigger: CTGACTCGCAGCTTGTGCTCAGCATGTTCTTTGGTT...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTGGAATCTTCCCAGTTCTGCTGGGTaGACAATGTGTCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: WVVIKVLVVNTASKTWNLPSSAG*TMCPPT
Trigger: GGTTGGGGGACACATTGTTCACCCAGCAGAACTGGG...AAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTCCCAGTTCTGCTGGGTaGACAATGTGTCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVPSSAG*TMCPPT
Trigger: GGTTGGGGGACACATTGTTCACCCAGCAGAACTGGG...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAAAAACAACAACAAATaGACGTGCAGCCTCCTATGC +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVKNNNK*TCSLLC
Trigger: GCATAGGAGGCTGCACGTTCATTTGTTGTTGTTTTT...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCAAAAACAACAACAAATaGACGTGCAGCCTCCTATGC +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAKNNNK*TCSLLC
Trigger: GCATAGGAGGCTGCACGTTCATTTGTTGTTGTTTTT...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTAGGGTCGTGCTGGCTGTaGGGGAACCCTCACAATCCC +
Preference number: 4 (lower is better)
Translates to: CSRVRYVIECFALGQFYLGSCWL*GNPHNP
Trigger: GGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCC...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTAAAACCCTGAGACGGTaGTGGAGCTGGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCKTLRR*WSWGVK
Trigger: CTTGACACCCCAGCTCCATCACCGTCTCAGGGTTTT...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGCTGCCCTACAGATTTTaGACTCTACTGCAACATCAG +
Preference number: 4 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSLPYRF*TLLQHQ
Trigger: CTGATGTTGCAGTAGAGTTCAAAATCTGTAGGGCAG...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCAATCATATGCCTGAATaGCCAAGAAGCTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWANHMPE*PRSWLK
Trigger: CTTTAGCCAGCTTCTTGGTCATTCAGGCATATGATT...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGGGTGGGAGGATCACTTaGGCCCAGAAGGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKGGRIT*AQKVEA
Trigger: AGCTTCAACCTTCTGGGCTCAAGTGATCCTCCCACC...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAATGGCCCACTTTCCCTaGGACCCTGTAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKMAHFP*DPVAGR
Trigger: TCTTCCAGCTACAGGGTCTCAGGGAAAGTGGGCCAT...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNLVLFI*SNLGTW
Trigger: CCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAG...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAATGCTCAGGATCCTCGTaGTGTTTATTTGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: TQAYTPTQAPLHRARERKCSGSS*CLFAPT
Trigger: AGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATATGCTCAGGATCCTCGTaGTGTTTATTTGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPICSGSS*CLFAPT
Trigger: AGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTGGAATCTTGCCAAGCATAGGTCCTaGACGGGGGTCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: WVVIKVLVVNTASKTWNLAKHRS*TGVWNC
Trigger: ACAGTTCCAGACCCCCGTGCAGGACCTATGCTTGGC...AAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACGCTGCAATGGCCATATaGATGCTAAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNAAMAI*MLRDAG
Trigger: CCCTGCATCCCTTAGCATGCATATGGCCATTGCAGC...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAACAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: FRNRELGKWFSPTICLQKQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGCAACTCAGGCCCCTCTaGATAGAGCCAGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWQLRPL*IEPGKE
Trigger: TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTG...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QAILLYPSHTWQTFLRGMTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...CATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTAACTTGAATCCAAACTaGTTGCACATAAATAGAACG +
Preference number: 4 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLNLNPN*LHINRT
Trigger: CGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTT...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCACTAACACAGAAATCATaGCTGAGTTTCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPLTQKS*LSFQPV
Trigger: CACAGGCTGGAAACTCAGGCATGATTTCTGTGTTAG...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGAGGTTGGGTCAACTaGCTTCCAACAGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKRGWVN*LPTAGK
Trigger: CTTACCAGCTGTTGGAAGGCAGTTGACCCAACCTCT...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACAATGAGCTGAGATCATaGCACTGCACTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYNELRS*HCTSAW
Trigger: CCAGGCTGAAGTGCAGTGGCATGATCTCAGCTCATT...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR GCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTGAAGCAGGAGAATTaGTTGAACCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKALKQEN*LNLGGG
Trigger: TCCACCTCCCAGGTTCAAGCAATTCTCCTGCTTCAG...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR GCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGTGGCTCTGTCCTGTTTaGCTTGCTCCCTGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQWLCPV*LAPCSN
Trigger: GTTACTGCAGGGAGCAAGGCAAACAGGACAGAGCCA...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAATCCTCTGCAGGTCTCTaGTCCAGTAGGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKSSAGL*SSREKA
Trigger: AGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGA...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTACCATTGCCAAGGCCTaGCTCTTGACGGCTACGGCA +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVTIAKA*LLTATA
Trigger: TGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGT...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTATCCTGCACGGGGGTCTaGAACTGTGCCAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: CSRVRYVIECFALGQFYLSCTGV*NCARVV
Trigger: GACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGA...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTGGTTGGTACGGGGTGTaGAGGGATGAGCCTGTACTC +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVGWYGV*RDEPVL
Trigger: GAGTACAGGCTCATCCCTCCACACCCCGTACCAACC...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAATGGCGAGGCAGTGCCTaGGCTCAGCTGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKWRGSA*AQLQWP
Trigger: TGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCA...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGAAGCTGCTTCCATAGGTaGTGGCGAGGCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGSCFHR*WRGSAW
Trigger: CCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCT...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCTCCTGCTGCCTCACTTaGCTGAGCTCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSSCCLT*LSSPLQ
Trigger: CTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGA...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAATACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGAAAAGCACCCAATATaGGATCCTCCGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCEKHPI*DPPGVL
Trigger: CAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTC...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 4 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTACGAGAGCTGGGAAAATaGTTCTCTCCAACCATATGC +
Preference number: 4 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLRELGK*FSPTIC
Trigger: GCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCG...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKSGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTA +
Preference number: 4 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACELLPP*VVIKVL
Trigger: TAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPITQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCGCTTGCCTATCAATaGTGGTATCAAACGCCCATG +
Preference number: 4 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPSLAYQ*WYQTPM
Trigger: CATGGGCGTTTGATACCACCATTGATAGGCAAGCGA...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTCAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 4 (lower is better)
Translates to: FKRSTDPPRSKALQGWPPQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...AGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAACAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 4 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKEQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAACACAGTCTCCAGGACTaGCAAGGGGCTAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKHSLQD*QGAKES
Trigger: GGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTG...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATGCTAGTGTGACACGGTaGCAGAGTCTTATCCACACC +
Preference number: 4 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNASVTR*QSLIHT
Trigger: GGTGTGGATAAGACTCTGCCACCGTGTCACACTAGC...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCAAGATTGAGGTTTCCTaGAGAATAAATTTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPKIEVS*RINFAS
Trigger: TGAGGCAAAATTTATTCTCCAGGAAACCTCAATCTT...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTAAAGCCTCCATAATGTaGGTGGGCCTCATCCAACTG +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKAKASIM*VGLIQL
Trigger: CAGTTGGATGAGGCCCACCCACATTATGGAGGCTTT...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGTTTATGTGGCAGCTTaGCTAGGCTACAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLVYVAA*LGYSAC
Trigger: ACAGGCACTGTAGCCTAGCCAAGCTGCCACATAAAC...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACTGGAAGAAATACAAGTaGATCCCTCTGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GKTEVLSETPFKEEYESDWKKYK*IPLAEG
Trigger: GCCTTCAGCCAGAGGGATCCACTTGTATTTCTTCCA...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAACGTTGTCATACACTCTaGCTTCCAGGAGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKRCHTL*LPGGWR
Trigger: GCGCCATCCTCCTGGAAGCCAGAGTGTATGACAACG...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTACTCAGACCAGGCTTTaGGGACCTTCTCAAAAACAC +
Preference number: 4 (lower is better)
Translates to: EGEVLAAQDPRAVYLLQLTQTRL*GPSQKH
Trigger: GTGTTTTTGAGAAGGTCCCCAAAGCCTGGTCTGAGT...AAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644926.1
3UTR CAA 72 bp GTATGTGGTGGAGAGAGGTGGGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VCGGERWELFKS*SSFQRASPSLG
Trigger: ACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTCCCACCTCTCTCCACCACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCGTTGTAGCGATCCATaGAGTGGTCCAGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKRCSDP*SGPAGR
Trigger: TCTACCTGCTGGACCACTTCATGGATCGCTACAACG...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACAATGGGCATACTCCTTaGGGCACTCTTTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNNGHTP*GTLWSC
Trigger: GCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATT...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTAATGGGCATACTCCTTaGGGCACTCTTTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGNGHTP*GTLWSC
Trigger: GCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATT...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGGCAGTGTGGCAATTAAATTGTGATCTTGCAGGGTaGCCTCTAGGAAGTAATGGG +
Preference number: 4 (lower is better)
Translates to: LGFQINSPHVGQAVWQLNCDLAG*PLGSNG
Trigger: CCCATTACTTCCTAGAGGTCACCCTGCAAGATCACA...ATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAACATGTGGCTCCCACTaGAGTAGCTGCTTCCATAGG +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKTCGSH*SSCFHR
Trigger: CCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGT...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGAGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: RGRRFSEECSRVRYVIECKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACAAACCAAAGAACATGCTaGGCACAAGCTGCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTNQRTC*AQAASQ
Trigger: CTGACTCGCAGCTTGTGCTCAGCATGTTCTTTGGTT...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCCCTCCTATGCTAGTGTaGCACGGTGGCAGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSPPMLV*HGGRVL
Trigger: TAAGACTCTGCCACCGTGTCACACTAGCATAGGAGG...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CCTCCTAGAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTTGAAAACCTCACAGATACAAGAACTTaGATCCAAACTGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: PPREGSRSFCSLLRLENLTDTRT*IQTACT
Trigger: TGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGT...GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTCTAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCACAGATACAAGAACTTaGATCCAAACTGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: AAQDPRAVYLLQLGDVVFTDTRT*IQTACT
Trigger: TGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGT...GAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GCCTTGATGTACATTATGTTATTTAATCCTCTTAAGAACCCTATGAGGCAAGGTGGGTCGTGCTGGCTGTaGGGGAACCCTCACAATCCC +
Preference number: 4 (lower is better)
Translates to: ALMYIMLFNPLKNPMRQGGSCWL*GNPHNP
Trigger: GGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCC...ACCTTGCCTCATAGGGTTCTTAAGAGGATTAAATAACATAATGTACATCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGAGATCAAGAGCAGGTaGCGTGTTTATTGTGGGACG +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAEIKSR*RVYCGT
Trigger: CGTCCCACAATAAACACGTCACCTGCTCTTGATCTC...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000644926.1
CDS-3UTR TCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTCACAGAAATCATGCCTaGGTTTCCAGCCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVHRNHA*VSSLWA
Trigger: GGCCCACAGGCTGGAAACTCAGGCATGATTTCTGTG...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGCAAGACAGAAGTCTTaGGTGAGACTCCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKARQKS*VRLPSR
Trigger: CCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTCAGCTTGCTCAGGCTTaGAAACCTCTGAATTTAACC +
Preference number: 4 (lower is better)
Translates to: TTNERAASYASVTRWQSLQLAQA*KPLNLT
Trigger: GGTTAAATTCAGAGGTTTTCAAGCCTGAGCAAGCTG...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTAGGATTTTTCATCTaGAAAGGGGGACCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKALGFFI*KGGPAG
Trigger: TCCTGCTGGTCCCCCTTTTCAGATGAAAAATCCTAG...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR TCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTAGGTGGAGGTTGCAATaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: EECSRVRYVIECFALGQFRWRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCATTGCAACCTCCACCT...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR TCA 90 bp CAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGAAGAGGTCAGCTTTGTaGCCATGTCTGAGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: QAILLYPSHTWQTFLRGMKRSAL*PCLRKV
Trigger: TACTTTTCTCAGACATGGTCACAAAGCTGACCTCTT...CATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATTGCTCAGGATCCTCGTaGTGTTTATTTGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHCSGSS*CLFAPT
Trigger: AGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTTGCTCAGGATCCTCGTaGTGTTTATTTGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: TTNERAASYASVTRWQSLCSGSS*CLFAPT
Trigger: AGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCA...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAATCAGGGATGGCCTCCTaGTGCCTCACTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKSGMAS*CLTWLS
Trigger: GCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGA...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAAGCTCTGTGGTTACCTaGGGGTCCATCACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKSSVVT*GSITSW
Trigger: CCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCAACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 4 (lower is better)
Translates to: SSVVTCGSITSWVQTWVPANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCGCTGAGATTTTCAGCTaGTCTGGAAAGATTCACCAC +
Preference number: 4 (lower is better)
Translates to: ELLPPWVVIKVLVVNTASAEIFS*SGKIHH
Trigger: GTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC...GGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACGCTGAGATTTTCAGCTaGTCTGGAAAGATTCACCAC +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHAEIFS*SGKIHH
Trigger: GTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGAACTTGAATCCAAACTaGTTGCACATAAATAGAACG +
Preference number: 4 (lower is better)
Translates to: HMHAKGCRDGHGTHIQGLNLNPN*LHINRT
Trigger: CGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTT...CAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTCCAGCCTGCTGACATaGCCCACAAATTTTAGACCA +
Preference number: 4 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKSSLLT*PTNFRP
Trigger: TGGTCTAAAATTTGTGGGGCATGTCAGCAGGCTGGA...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATAAATCTTACATGGGAGTaGCCAAGGGTGGAAGAAATA +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPINLTWE*PRVEEI
Trigger: TATTTCTTCCACCCTTGGGCACTCCCATGTAAGATT...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGAGAAGCTGGCTAAAGTaGAGATTCCAGGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQRSWLK*RFQVPT
Trigger: GGTGGGGACCTGGAATCTGCACTTTAGCCAGCTTCT...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGAGGTCAGCTCATTTaGTCCCATTTGAACCATGCT +
Preference number: 4 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTGGQLI*SHLNHA
Trigger: AGCATGGTTCAAATGGGAGCAAATGAGCTGACCTCC...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACAAATGAGCTGAGATCATaGCACTGCACTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTNELRS*HCTSAW
Trigger: CCAGGCTGAAGTGCAGTGGCATGATCTCAGCTCATT...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR GCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTCTGAAGCAGGAGAATTaGTTGAACCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGLKQEN*LNLGGG
Trigger: TCCACCTCCCAGGTTCAAGCAATTCTCCTGCTTCAG...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR CCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: TRGRRFSEECSRVRYVIELFAPT*GRGLPD
Trigger: ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAA...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GCCTTGATGTACATTATGTTATTTAATCCTCTTAAGAACCCTATGAGGCAAGGTAGGCTCCCTGAACGGTaGGCCTGCAAGGAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: ALMYIMLFNPLKNPMRQGRLPER*ACKESR
Trigger: TCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCT...ACCTTGCCTCATAGGGTTCTTAAGAGGATTAAATAACATAATGTACATCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTGGAATCTTCGTGAGGTCTGGAGGTaGCCTATCTGTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: WVVIKVLVVNTASKTWNLREVWR*PICQSS
Trigger: GCTGCTTTGACAGATAGGCCACCTCCAGACCTCACG...AAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGTACCCTAGCCACACGTaGCAGACGTTTCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQYPSHT*QTFLRG
Trigger: TCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTA...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 4 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAATCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKSGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTCCGGAACCGAGAGCTaGGAAAATGGTTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGSGTES*ENGSLQ
Trigger: TTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGA...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTA +
Preference number: 4 (lower is better)
Translates to: RAVYLLQLGDVVFPILELELLPP*VVIKVL
Trigger: TAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC...AAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLTQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHTQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAACTTGCCTATCAATGGTaGTATCAAACGCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: MLEISGLCPVPTLLASYQLAYQW*YQTPMY
Trigger: GTACATGGGCGTTTGATACCACCATTGATAGGCAAG...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAACAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 4 (lower is better)
Translates to: TQAYTPTQAPLHRARERKQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGAGTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 4 (lower is better)
Translates to: RVFLRALSLQIPKYWLLIQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...GATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATACAGATCCCTAAATACTaGCTTTTGATCCAACCAGTC +
Preference number: 4 (lower is better)
Translates to: THQLRPLCIEPGKEKHPIQIPKY*LLIQPV
Trigger: GACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTG...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACAAAAGCCTCCATAATGTaGGTGGGCCTCATCCAACTG +
Preference number: 4 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTKASIM*VGLIQL
Trigger: CAGTTGGATGAGGCCCACCCACATTATGGAGGCTTT...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTGGCTCAGAGAGAGGTTaGGTCAACTGCCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: RPLREAAAHDISKRLKMVGSERG*VNCLPT
Trigger: TGTTGGAAGGCAGTTGACCCAACCTCTCTCTGAGCC...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGTTTTGTGGATTCTCCTaGGAGCTTCGACCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQFCGFS*ELRPFS
Trigger: CGAGAAGGGTCGAAGCTCCCAGGAGAATCCACAAAA...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR TCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTTGTGATCTTGCAGGGTaGCCTCTAGGAAGTAATGGG +
Preference number: 4 (lower is better)
Translates to: RPLREAAAHDISKRLKMVCDLAG*PLGSNG
Trigger: CCCATTACTTCCTAGAGGTCACCCTGCAAGATCACA...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTACATGTGGCTCCCACTaGAGTAGCTGCTTCCATAGG +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVTCGSH*SSCFHR
Trigger: CCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGT...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTAGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: CSRVRYVIECFALGQFYLAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: DVESSGTESWENGSLQPYGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LCPVPTLLASYQVFLDSLGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...CAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAAAAACTGGACATGCTTaGGATCAGTGGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: STLLSFAISHTQSLDWVKKTGHA*DQWSVS
Trigger: GGACACAGACCACTGATCTCAAGCATGTCCAGTTTT...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGCTAAATACTGGCTTTTaGTCCAACCAGTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPALNTGF*SNQSLA
Trigger: GGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAG...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTCCTCCTATGCTAGTGTaGCACGGTGGCAGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVPPMLV*HGGRVL
Trigger: TAAGACTCTGCCACCGTGTCACACTAGCATAGGAGG...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACAAAAACAACAACAAATaGACGTGCAGCCTCCTATGC +
Preference number: 4 (lower is better)
Translates to: GKTEVLSETPFKEEYESDKNNNK*TCSLLC
Trigger: GCATAGGAGGCTGCACGTTCATTTGTTGTTGTTTTT...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGACAGATACAAGAACTTaGATCCAAACTGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGTDTRT*IQTACT
Trigger: TGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGT...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCATTTTAACAGGTaGCAAGATGGAGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTSHFNR*QDGGSE
Trigger: CTCTGAGCCTCCATCTTGTCACCTGTTAAAATGGGA...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAATGCAGCCTCAGGCCCTaGGCTCATCTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKCSLRP*AHLPIP
Trigger: AGGAATGGGAAGATGAGCTCAGGGCCTGAGGCTGCA...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAACACATATCCAAGGGCTaGAGCGGTTGGTACGGGGTG +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKHISKG*SGWYGV
Trigger: CACCCCGTACCAACCGCTGCAGCCCTTGGATATGTG...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAACTGTGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: DWVKLMPCKYVVERGGNCAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...ACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTAGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSLQIPKYWLLIQPVACLAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...TAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCAGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 4 (lower is better)
Translates to: SLQPYAFKKEALWLPAGPANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...TGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 4 (lower is better)
Translates to: TTNERAASYASVTRWQSLANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTAGCTTCCACGGTCCTTTaGACCTCCCAGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSRVRYVIECFALGQFYLASTVL*TSQFCW
Trigger: CCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: FKRSTDPPRSKALQGWPPKQNKN*FHGPLH
Trigger: GTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTT...AGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAKQNKN*FHGPLH
Trigger: GTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTT...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: FCTLATRGRRFSEECSRVKQNKN*FHGPLH
Trigger: GTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTT...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTGCTGAGATTTTCAGCTaGTCTGGAAAGATTCACCAC +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKAAEIFS*SGKIHH
Trigger: GTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGCTGAGATTTTCAGCTaGTCTGGAAAGATTCACCAC +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNAEIFS*SGKIHH
Trigger: GTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGAACTTGAATCCAAACTaGTTGCACATAAATAGAACG +
Preference number: 4 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLNLNPN*LHINRT
Trigger: CGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTT...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGATTTTGAACTCTACTaGAACATCAGCTCTTACCTG +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPDFELY*NISSYL
Trigger: CAGGTAAGAGCTGATGTTGCAGTAGAGTTCAAAATC...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQLFAPT*GRGLPD
Trigger: ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAA...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGLFAPT*GRGLPD
Trigger: ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAA...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPALFAPT*GRGLPD
Trigger: ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAA...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAACCATTGCCAAGGCCTaGCTCTTGACGGCTACGGCA +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKTIAKA*LLTATA
Trigger: TGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGT...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGTTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 4 (lower is better)
Translates to: KANTQAYTPTQAPLHRARFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAATTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAACGAGAGCTGGGAAAATaGTTCTCTCCAACCATATGC +
Preference number: 4 (lower is better)
Translates to: FRNRELGKWFSPTICLQKRELGK*FSPTIC
Trigger: GCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCG...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACACGAGAGCTGGGAAAATaGTTCTCTCCAACCATATGC +
Preference number: 4 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTRELGK*FSPTIC
Trigger: GCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCG...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTA +
Preference number: 4 (lower is better)
Translates to: DVESSGTESWENGSLQPYELLPP*VVIKVL
Trigger: TAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATTGTGGTGGAGAGAGGTaGGAACTGTTTAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHCGGER*ELFKSL
Trigger: CAAAGATTTAAACAGTTCCCACCTCTCTCCACCACA...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCTGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSCPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKTQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAACTTGCCTATCAATGGTaGTATCAAACGCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKLAYQW*YQTPMY
Trigger: GTACATGGGCGTTTGATACCACCATTGATAGGCAAG...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GGCAAGACAGAAGTCTTGAGTGAGACTCCCTTCAAGGAGGAGTACGAATCTGACCTCCATAGTAACAGATaGAGAAATGGAAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GKTEVLSETPFKEEYESDLHSNR*RNGSPK
Trigger: CTTTGGGCTTCCATTTCTCCATCTGTTACTATGGAG...GTCAGATTCGTACTCCTCCTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTAGCTGTCCTCCAGCATaGGAATTAACACAATCTTAC +
Preference number: 4 (lower is better)
Translates to: EGEVLAAQDPRAVYLLQLSCPPA*ELTQSY
Trigger: GTAAGATTGTGTTAATTCCCATGCTGGAGGACAGCT...AAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTTTTCAATACACGTGCTaGGGTGCTCCAGGGAATAGC +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVFQYTC*GAPGNS
Trigger: GCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAA...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGACGGCTACGGCATCCTTaGGGACGTTGTCATACACTA +
Preference number: 4 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGRLRHP*GRCHTL
Trigger: TAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCG...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000644313.1
CDS-3UTR TCA 90 bp GCCTTGATGTACATTATGTTATTTAATCCTCTTAAGAACCCTATGAGGCAAGGTGCTGCCTCACTTGGCTaGGCTCTCCTCTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ALMYIMLFNPLKNPMRQGAASLG*ALLFSV
Trigger: GACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGC...ACCTTGCCTCATAGGGTTCTTAAGAGGATTAAATAACATAATGTACATCAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp TGCTCTGGGTCAGTTTTATTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CSGSVLFKRSTDPPRSKAGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAACTAAATACTGGCTTTTaGTCCAACCAGTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKLNTGF*SNQSLA
Trigger: GGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAG...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTCTAAATACTGGCTTTTaGTCCAACCAGTCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: RPLREAAAHDISKRLKMVLNTGF*SNQSLA
Trigger: GGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAG...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAAAAACAACAACAAATaGACGTGCAGCCTCCTATGC +
Preference number: 4 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKKNNNK*TCSLLC
Trigger: GCATAGGAGGCTGCACGTTCATTTGTTGTTGTTTTT...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
46% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATACAGATACAAGAACTTaGATCCAAACTGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: DVESSGTESWENGSLQPYTDTRT*IQTACT
Trigger: TGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGT...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTGGAATCTTCTCGTGCTGTTTATTTaGTCCAACTTGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: WVVIKVLVVNTASKTWNLLVLFI*SNLGTW
Trigger: CCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAG...AAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GCCTTGATGTACATTATGTTATTTAATCCTCTTAAGAACCCTATGAGGCAAGGTGCCAAGCATAGGTCCTaGACGGGGGTCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: ALMYIMLFNPLKNPMRQGAKHRS*TGVWNC
Trigger: ACAGTTCCAGACCCCCGTGCAGGACCTATGCTTGGC...ACCTTGCCTCATAGGGTTCTTAAGAGGATTAAATAACATAATGTACATCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAAGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TRGRRFSEECSRVRYVIEAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp CGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: RGRRFSEECSRVRYVIECFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...ACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FRNRELGKWFSPTICLQKTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GCTACGGCATCCTTGAGGACGTTGTCATACACTACCAGCAGGATTTCAATACACGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 4 (lower is better)
Translates to: ATASLRTLSYTTSRISIHANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...GTGTATTGAAATCCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGCCGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643539.1
CDS-3UTR GCA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKKQNKN*FHGPLH
Trigger: GTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTT...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: TQAYTPTQAPLHRARERKKQNKN*FHGPLH
Trigger: GTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTT...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGCTGAGATTTTCAGCTaGTCTGGAAAGATTCACCAC +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWAEIFS*SGKIHH
Trigger: GTGGTGAATCTTTCCAGAGCAGCTGAAAATCTCAGC...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSLFAPT*GRGLPD
Trigger: ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAA...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGATCCTCTGCAGGTCTCTaGTCCAGTAGGGAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGSSAGL*SSREKA
Trigger: AGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGA...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGTTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 4 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RPLREAAAHDISKRLKMVGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGGCTGAAAATGGTTAAAAAGGAAGCTCTGTaGTTACCTGCGGGTCCATCA +
Preference number: 4 (lower is better)
Translates to: RPLREAAAHDISKRLKMVKKEAL*LPAGPS
Trigger: TGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTT...AACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTA +
Preference number: 4 (lower is better)
Translates to: KRKLCGYLRVHHKLGSNLELLPP*VVIKVL
Trigger: TAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC...CAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATTGTGGTGGAGAGAGGTaGGAACTGTTTAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNCGGER*ELFKSL
Trigger: CAAAGATTTAAACAGTTCCCACCTCTCTCCACCACA...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTTGCCCTGTAAGTATGTaGTGGAGAGAGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVCPVSM*WREVGT
Trigger: AGTTCCCACCTCTCTCCACCACATACTTACAGGGCA...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACAGATTTTCAGCTGCTCTaGAAAGATTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTDFQLL*KDSPPS
Trigger: GGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATC...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGATTTTCAGCTGCTCTaGAAAGATTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPADFQLL*KDSPPS
Trigger: GGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATC...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACGCAACATATAATCAATaGTATCTTGCAAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHATYNQ*YLANCL
Trigger: GAGGCAGTTTGCAAGATACCATTGATTATATGTTGC...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTCCAGATTCCTTTTGTaGATTCTCCTGGGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: EECSRVRYVIECFALGQFSRFLL*ILLGAS
Trigger: CGAAGCTCCCAGGAGAATCCACAAAAGGAATCTGGA...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CCA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTTCTATAAGATTACACTaGGACTTAGATCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: ALERFTTFRSDSAADSCLSIRLH*DLDQIA
Trigger: GGCTATTTGATCTAAGTCCCAGTGTAATCTTATAGA...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAACTCCAGGGAATAGCTTaGGATCCTCTGCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKLQGIA*DPLQVS
Trigger: AGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAG...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAACAGATACAAGAACTTaGATCCAAACTGCTTGCACA +
Preference number: 4 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKTDTRT*IQTACT
Trigger: TGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGT...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTGGAATCTTTCCCATTTTAACAGGTaGCAAGATGGAGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: WVVIKVLVVNTASKTWNLSHFNR*QDGGSE
Trigger: CTCTGAGCCTCCATCTTGTCACCTGTTAAAATGGGA...AAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCAGCTTGCTCAGGCTTaGAAACCTCTGAATTTAACC +
Preference number: 4 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKQLAQA*KPLNLT
Trigger: GGTTAAATTCAGAGGTTTTCAAGCCTGAGCAAGCTG...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTTTTAAGTATCTTCTCTaGCACACTGAACATTTCCTC +
Preference number: 4 (lower is better)
Translates to: TTNERAASYASVTRWQSLFKYLL*HTEHFL
Trigger: GAGGAAATGTTCAGTGTGTCAGAGAAGATACTTAAA...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCACTGGGTTAAACTCATaGCCTGTAAGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSTGLNS*PVSMWW
Trigger: CCACCACATACTTACAGGGCATGAGTTTAACCCAGT...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGCAAATTTTCCACATTaGTATCCTTCGCTATCAGCC +
Preference number: 4 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWANFPH*YPSLSA
Trigger: GGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGC...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTATCCAACCAGTCGCTTaGCTATCAATGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: EECSRVRYVIECFALGQFIQPVA*LSMVVS
Trigger: TGATACCACCATTGATAGGCAAGCGACTGGTTGGAT...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAACTTGAATCCAAACTaGTTGCACATAAATAGAACG +
Preference number: 4 (lower is better)
Translates to: SSVVTCGSITSWVQTWVPNLNPN*LHINRT
Trigger: CGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTT...TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAAACAAAGAAATCATATaGCTGAATGACCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPNKEII*LNDQEA
Trigger: AGCTTCTTGGTCATTCAGGCATATGATTTCTTTGTT...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVLFAPT*GRGLPD
Trigger: ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAA...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGATTAACAGCCCTCATGTaGGACAGGCAGTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGLTALM*DRQCGN
Trigger: ATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAA...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTAACAGCCTCCAAGACGTaGAATCTTCCGGAACCGAGA +
Preference number: 4 (lower is better)
Translates to: CSRVRYVIECFALGQFYLTASKT*NLPEPR
Trigger: TCTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGT...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGAGCTTCTCCCTCCCTaGGTAGTTATTAAAGTTCTA +
Preference number: 4 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAELLPP*VVIKVL
Trigger: TAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTC...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTGTGGTGGAGAGAGGTaGGAACTGTTTAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGCGGER*ELFKSL
Trigger: CAAAGATTTAAACAGTTCCCACCTCTCTCCACCACA...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAACTCAAAGCCTAGACTaGGTTAAACTCATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKTQSLD*VKLMPC
Trigger: ACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGT...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAACTTGCCTATCAATGGTaGTATCAAACGCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKLAYQW*YQTPMY
Trigger: GTACATGGGCGTTTGATACCACCATTGATAGGCAAG...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTGATTTTCAGCTGCTCTaGAAAGATTCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: EECSRVRYVIECFALGQFDFQLL*KDSPPS
Trigger: GGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATC...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp GTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGCCATATATATCCTACTaGTTTCTTTGGAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: VKFWLLRILVLFICSNLGPYISY*FLWKNP
Trigger: AGGGTTTTTCCAAAGAAACCAGTAGGATATATATGG...CCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR TCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGGGTGAGGTATGTTATTaGATGTTTTGCTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKGEVCY*MFCSGS
Trigger: TGACCCAGAGCAAAACATTCAATAACATACCTCACC...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR TCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTGAATTTCCAGCCTGCTaGCATGCCCCACAAATTTTA +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVEFPAC*HAPQIL
Trigger: TAAAATTTGTGGGGCATGTCAGCAGGCTGGAAATTC...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGAGGTTGCAATGAGCTaGGATCATGCCACTGCACTT +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKEVAMS*DHATAL
Trigger: AAGTGCAGTGGCATGATCTCAGCTCATTGCAACCTC...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR TCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGACGTCACTGCAGAATaGATCAACCACGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKDVTAE*INHVSA
Trigger: TGCTGAGACGTGGTTGATTCATTCTGCAGTGACGTC...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR GCA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGTTTCAGCGGTGTAGCTaGCATCAGCAAAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKFQRCS*HQQRIE
Trigger: TTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 4 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTTTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 4 (lower is better)
Translates to: TTNERAASYASVTRWQSLFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCTGTGGTGGAGAGAGGTaGGAACTGTTTAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: CVNKTSYETESKTTSGSSCGGER*ELFKSL
Trigger: CAAAGATTTAAACAGTTCCCACCTCTCTCCACCACA...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGATTGAGGTTTCCTaGAGAATAAATTTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHKIEVS*RINFAS
Trigger: TGAGGCAAAATTTATTCTCCAGGAAACCTCAATCTT...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAACGTTTCTCAGAGGAATaGTCTCGGGTGAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKRFSEE*SRVRYV
Trigger: AACATACCTCACCCGAGAGCATTCCTCTGAGAAACG...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCAAACAAAGAAATCATATaGCTGAATGACCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSNKEII*LNDQEA
Trigger: AGCTTCTTGGTCATTCAGGCATATGATTTCTTTGTT...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTAAGTTCCCATCTCTCATaGTGCTTAGGGGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: CSRVRYVIECFALGQFYLSSHLS*CLGEIR
Trigger: CCTTATCTCCCCTAAGCAGCATGAGAGATGGGAACT...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CCA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATTTTAATGCTAAAAACTaGACATGCTTGAGATCAGTG +
Preference number: 4 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNFNAKN*TCLRSV
Trigger: CACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAA...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGGTCCATCACAAGTTaGGTTCAAACTTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKGSITS*VQTWVP
Trigger: TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCC...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CAA 72 bp AATAGAAAAGTCTTTAATGCTAAAAACTGGACATGCTaGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: NRKVFNAKNWTC*RSVVCVQFPLS
Trigger: GGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGCATTAAAGACTTTTCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGAGCTAAAAACTGGACATaGTTGAGATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGAKNWT*LRSVVC
Trigger: ACAGACCACTGATCTCAAGCATGTCCAGTTTTTAGC...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGAACTTGAATCCAAACTaGTTGCACATAAATAGAACG +
Preference number: 4 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQNLNPN*LHINRT
Trigger: CGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTT...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTATCCTACTGGTTTCTTTaGAAAAACCCTGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: CSRVRYVIECFALGQFYLSYWFL*KNPETV
Trigger: CACCGTCTCAGGGTTTTTCCAAAGAAACCAGTAGGA...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR TCA 90 bp GCCTTGATGTACATTATGTTATTTAATCCTCTTAAGAACCCTATGAGGCAAGGTCTGCCCTACAGATTTTaGACTCTACTGCAACATCAG +
Preference number: 4 (lower is better)
Translates to: ALMYIMLFNPLKNPMRQGLPYRF*TLLQHQ
Trigger: CTGATGTTGCAGTAGAGTTCAAAATCTGTAGGGCAG...ACCTTGCCTCATAGGGTTCTTAAGAGGATTAAATAACATAATGTACATCAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR GCA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTAACTTGAATCCAAACTaGTTGCACATAAATAGAACG +
Preference number: 4 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVNLNPN*LHINRT
Trigger: CGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTT...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
3UTR CAA 72 bp AGAACAGACAGATACAAGAACTTGAATCCAAACTGCTaGCACATAAATAGAACGGAGGTTGGCAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RTDRYKNLNPNC*HINRTEVGKGK
Trigger: TTTTCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTCTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTAAAACAAAACAAAAATTaGTTCCACGGTCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: CSRVRYVIECFALGQFYLKQNKN*FHGPLH
Trigger: GTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTT...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGAAACTTGAATCCAAACTaGTTGCACATAAATAGAACG +
Preference number: 4 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGNLNPN*LHINRT
Trigger: CGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTT...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR GCA 90 bp GCCTTGATGTACATTATGTTATTTAATCCTCTTAAGAACCCTATGAGGCAAGGTGATTTTGAACTCTACTaGAACATCAGCTCTTACCTG +
Preference number: 4 (lower is better)
Translates to: ALMYIMLFNPLKNPMRQGDFELY*NISSYL
Trigger: CAGGTAAGAGCTGATGTTGCAGTAGAGTTCAAAATC...ACCTTGCCTCATAGGGTTCTTAAGAGGATTAAATAACATAATGTACATCAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS GCA 90 bp CGCCGGGCCCCTCCCAGTGCCGAGCCAGCCGTGCCCTCTGGTGCCTaGCGGCGGTTGGACCCTCGTCCGAGGCGCTCCGCACTCCCGACG +
Preference number: 5 (lower is better)
Translates to: RRAPPSAEPAVPSGA*RRLDPRPRRSALPT
Trigger: CGTCGGGAGTGCGGAGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCACTGGGAGGGGCCCGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000520748.1
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS GCA 90 bp CGAGCGCCGGGCCCCTCCCAGTGCCGAGCCAGCCGTGCCCTCTGGTaGCTGCCGGCGGTTGGACCCTCGTCCGAGGCGCTCCGCACTCCC +
Preference number: 5 (lower is better)
Translates to: RAPGPSQCRASRALW*LPAVGPSSEALRTP
Trigger: GGGAGTGCGGAGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCACTGGGAGGGGCCCGGCGCTCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000520748.1
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS CCA 90 bp CTCCCAGTGCCGAGCCAGCCGTGCCCTCTGGTGCCTGCCGGCGGTTaGACCCTCGTCCGAGGCGCTCCGCACTCCCGACGGCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: LPVPSQPCPLVPAGG*TLVRGAPHSRRPPP
Trigger: CGGAGGCGGCCGTCGGGAGTGCGGAGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCACTGGGAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000520748.1
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS GCA 90 bp CCCTTCGCTGAGGCTAGTGGTAGCCTTCTGGGCACCCCTCCGGCTTaGGCAGGGAGCAAAGGGACCGCGGCGCCACCTGCGCGCACCACG +
Preference number: 5 (lower is better)
Translates to: PFAEASGSLLGTPPA*AGSKGTAAPPARTT
Trigger: CGTGGTGCGCGCAGGTGGCGCCGCGGTCCCTTTGCTCCCTGCGCAAGCCGGAGGGGTGCCCAGAAGGCTACCACTAGCCTCAGCGAAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS CCA 90 bp CCGGCTCTCAGGGCGCACCCTTCGCTGAGGCTAGTGGTAGCCTTCTaGGCACCCCTCCGGCTTGCGCAGGGAGCAAAGGGACCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: PALRAHPSLRLVVAF*APLRLAQGAKGPRR
Trigger: GCGCCGCGGTCCCTTTGCTCCCTGCGCAAGCCGGAGGGGTGCCCAGAAGGCTACCACTAGCCTCAGCGAAGGGTGCGCCCTGAGAGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS TCA 90 bp CGCAGGGAGCAAAGGGACCGCGGCGCCACCTGCGCGCACCACGCGTaGAACGTGCGGACAGGACGCCCCCAGAAAGTTCTGCCTTCCGCG +
Preference number: 5 (lower is better)
Translates to: RREQRDRGATCAHHA*NVRTGRPQKVLPSA
Trigger: CGCGGAAGGCAGAACTTTCTGGGGGCGTCCTGTCCGCACGTTTCACGCGTGGTGCGCGCAGGTGGCGCCGCGGTCCCTTTGCTCCCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS GCA 90 bp AGCAAAGGGACCGCGGCGCCACCTGCGCGCACCACGCGTGAAACGTaGGGACAGGACGCCCCCAGAAAGTTCTGCCTTCCGCGCGCACTG +
Preference number: 5 (lower is better)
Translates to: SKGTAAPPARTTRET*GQDAPRKFCLPRAL
Trigger: CAGTGCGCGCGGAAGGCAGAACTTTCTGGGGGCGTCCTGTCCGCACGTTTCACGCGTGGTGCGCGCAGGTGGCGCCGCGGTCCCTTTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS-3UTR CAA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGAGGCACTCTTTGGTCTaGCGGGGGCAGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKRHSLV*RGQVVG
Trigger: GCCCACCACCTGCCCCCGCAAGACCAAAGAGTGCCT...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGCCTTCTCGGCAAGCCTaGCAGCAGCCCACTCGGTGG +
Preference number: 5 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKPSRQA*QQPTRW
Trigger: CCACCGAGTGGGCTGCTGCAAGGCTTGCCGAGAAGG...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS TCA 90 bp CTTCCCGATCCTCGAACTTACCAGGGGCTGCCTCTGGCCCAGGTCTaGCGGCACTGCTGCGCTGAACGTGTGGGCACTGGGGACCCTGAT +
Preference number: 5 (lower is better)
Translates to: LPDPRTYQGLPLAQV*RHCCAERVGTGDPD
Trigger: ATCAGGGTCCCCAGTGCCCACACGTTCAGCGCAGCAGTGCCGTCAGACCTGGGCCAGAGGCAGCCCCTGGTAAGTTCGAGGATCGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377503.6
CDS CCA 90 bp GTCAGGATGTCCACGAAGAACCGGCGGCTCTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGCTTCAGTTCCTTCTCGCGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: VRMSTKNRRLFRSGE*ARKVGSFSSFSRRV
Trigger: CACCCTGCGCGAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000519673.1
ENST00000643539.1
ENST00000644313.1
ENST00000644926.1
CDS CCA 90 bp CAGCAGGGTCAGGATGTCCACGAAGAACCGGCGGCTCTTCAGGAGTaGGGAGTGGGCTCGGAAGGTGGGCAGCTTCAGTTCCTTCTCGCG +
Preference number: 5 (lower is better)
Translates to: QQGQDVHEEPAALQE*GVGSEGGQLQFLLA
Trigger: CGCGAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGACCCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000519673.1
ENST00000643539.1
ENST00000644313.1
ENST00000644926.1
CDS CCA 90 bp GGCTGCCTCTGGCCCAGGTCTGACGGCACTGCTGCGCTGAACGTGTaGGCACTGGGGACCCTGATCCTTTGTTCCGACTTGCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GCLWPRSDGTAALNV*ALGTLILCSDLQAG
Trigger: TCCTGCTTGCAAGTCGGAACAAAGGATCAGGGTCCCCAGTGCCCACACGTTCAGCGCAGCAGTGCCGTCAGACCTGGGCCAGAGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377503.6
CDS CCA 90 bp CAGCAGGGTCAGGATGTCCACGAAGAACCGGCGGCTCTTCAGGAGTaGGGAGTGGGCTCGGAAGGTGGGCAGCTTCAGTTCCTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: QQGQDVHEEPAALQE*GVGSEGGQLQFLED
Trigger: GTCCTCCAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGACCCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520748.1
CDS-3UTR CAA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTGGTGCCTGCCGGCGGTaGGACCCTCGTCCGAGGCGC +
Preference number: 5 (lower is better)
Translates to: ALERFTTFRSDSAADSCLGACRR*DPRPRR
Trigger: GCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACC...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTGGTCTTCGGTGCCTGCCGGCGGTaGGACCCTCGTCCGAGGCGC +
Preference number: 5 (lower is better)
Translates to: AAQDPRAVYLLQLGDVVFGACRR*DPRPRR
Trigger: GCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACC...GAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCATCCTTGAGGCACTCTTaGGTCTTGCGGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPSLRHS*VLRGQV
Trigger: CACCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGA...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACGGTGGGCCTGCAGCTCCAGGGAATAGCTaGAGATCCTCTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: GGMSLYSPRAGSLNGGPAAPGNS*RSSAGL
Trigger: GAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGC...TGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGCTGCCTTCCTGGCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGAGAGCGAAACTCCGTTaGCAAGCAGGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SCLPGGPCHSLQDWQGAKRAKLR*QAGGRR
Trigger: TCTCCTGCCTCCTGCTTGCAAACGGAGTTTCGCTCT...CTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS CCA 90 bp GGCAGGGTGCGGAGATACAGCCCTGAAGACTCTGCTCTCCCTGACTaGCCACGGGAGCTGACACAGTATTACCAAGGTCCCTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: GRVRRYSPEDSALPD*PRELTQYYQGPSGS
Trigger: GGAGCCTGAGGGACCTTGGTAATACTGTGTCAGCTCCCGTGGCCAGTCAGGGAGAGCAGAGTCTTCAGGGCTGTATCTCCGCACCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518764.1
ENST00000521643.1
CDS CCA 90 bp CCTCTCACTGGTCTGCAGGCTTGGTCTGCGTCAGAGGGAAGATGGTaGGCAGGGTGCGGAGATACAGCCCTGAAGACTCTGCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PLTGLQAWSASEGRW*AGCGDTALKTLLSL
Trigger: CAGGGAGAGCAGAGTCTTCAGGGCTGTATCTCCGCACCCTGCCCACCATCTTCCCTCTGACGCAGACCAAGCCTGCAGACCAGTGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518764.1
ENST00000521643.1
CDS-3UTR CAA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGGTGCCTGCCGGCGGTaGGACCCTCGTCCGAGGCGC +
Preference number: 5 (lower is better)
Translates to: MLEISGLCPVPTLLASYQGACRR*DPRPRR
Trigger: GCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACC...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAACGGTGGGCCTGCAACGGCTACGGCATCCTaGAGGACGTTGTCATACACT +
Preference number: 5 (lower is better)
Translates to: GGMSLYSPRAGSLNGGPATATAS*RTLSYT
Trigger: AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGT...TGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTGCCAAGGCCTGGCTCTaGACGGCTACGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFAKAWL*TATASL
Trigger: CAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGC...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CACTGCCCTCAGCCCCGCCCTTGGCGGTGTCAAACACACTCCTGGGTCTGGGCTCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: HCPQPRPWRCQTHSWVWARVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...AGCCCAGACCCAGGAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAGCCGAGGCAGTCAGATaGCTTGAGCTCAGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPAEAVR*LELRSL
Trigger: CAGACTCCTGAGCTCAAGCAATCTGACTGCCTCGGC...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS CCA 90 bp GTCAGGATGTCCACGAAGAACCGGCGGCTCTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGCTTCAGTTCCTGTAGTCTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: VRMSTKNRRLFRSGE*ARKVGSFSSCSLSC
Trigger: GCAGCTAAGACTACAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377503.6
ENST00000518764.1
CDS-3UTR CAA 90 bp CACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCTCCTTGAGGCACTCTTaGGTCTTGCGGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: HGPLHLPVLLGEQCVPQPSLRHS*VLRGQV
Trigger: CACCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGA...GGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTTCCTTGAGGCACTCTTaGGTCTTGCGGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLSLRHS*VLRGQV
Trigger: CACCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGA...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ATGGGAGTGCCCAAGGGTGGAAGAAATACAAGTGGATCCCTCTGGCTGAAGGCCCCCTCAGCCCCGCCCTaGGCGGTGTCAAACACACTC +
Preference number: 5 (lower is better)
Translates to: MGVPKGGRNTSGSLWLKAPSAPP*AVSNTL
Trigger: GAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGG...GGCCTTCAGCCAGAGGGATCCACTTGTATTTCTTCCACCCTTGGGCACTCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS CCA 90 bp CAGCAGGGTCAGGATGTCCACGAAGAACCGGCGGCTCTTCAGGAGTaGGGAGTGGGCTCGGAAGGTGGGCAGCTTCAGTTCTTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QQGQDVHEEPAALQE*GVGSEGGQLQFFFS
Trigger: AGAGAAAAAGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGACCCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541762.5
CDS-3UTR CAA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGTGCCTGCCGGCGGTaGGACCCTCGTCCGAGGCGC +
Preference number: 5 (lower is better)
Translates to: FRNRELGKWFSPTICLQKGACRR*DPRPRR
Trigger: GCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACC...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGGTGCCTGCCGGCGGTaGGACCCTCGTCCGAGGCGC +
Preference number: 5 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWGACRR*DPRPRR
Trigger: GCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACC...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCAGGCACTCTTTGGTCTaGCGGGGGCAGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWARHSLV*RGQVVG
Trigger: GCCCACCACCTGCCCCCGCAAGACCAAAGAGTGCCT...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTGCTCCAGGGAATAGCTaGAGATCCTCTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGAPGNS*RSSAGL
Trigger: GAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGC...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TGGTACGGGGTGTGGAGGGATGAGCCTGTACTCCCCGAGAGCAGGCTCCCTGAAACGGCTACGGCATCCTaGAGGACGTTGTCATACACT +
Preference number: 5 (lower is better)
Translates to: WYGVWRDEPVLPESRLPETATAS*RTLSYT
Trigger: AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGT...TTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACCCCGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFLLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 5 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS TCA 90 bp TCTCGGCAAGCCTTGCAGCAGCCCACTCGGTGGGTAACGACGACCTaGCACAGAGCTCTGGTCTTTGATGCAGAGGAGTTTGCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: SRQALQQPTRWVTTT*HRALVFDAEEFASR
Trigger: CCTGCTTGCAAACTCCTCTGCATCAAAGACCAGAGCTCTGTGTCAGGTCGTCGTTACCCACCGAGTGGGCTGCTGCAAGGCTTGCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS GCA 90 bp CCAACTGTGGGTCAGCTGACTTCATTTCTTCTCCTCTCACTGGTCTaGAGGCTTGGTCTGCGTCAGAGGGAAGATGGTGGGCAGGGTGCG +
Preference number: 5 (lower is better)
Translates to: PTVGQLTSFLLLSLV*RLGLRQREDGGQGA
Trigger: CGCACCCTGCCCACCATCTTCCCTCTGACGCAGACCAAGCCTGCAGACCAGTGAGAGGAGAAGAAATGAAGTCAGCTGACCCACAGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518764.1
ENST00000521643.1
CDS CCA 90 bp CGAAGAACCGGCGGCTCTTCAGGAGTGGGGAGTGGGCTCGGAAGGTaGGCAGCTTCAGTTCCTGTAGTCTTAGCTGCTCAGAAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: RRTGGSSGVGSGLGR*AASVPVVLAAQKAE
Trigger: TTCAGCTTTCTGAGCAGCTAAGACTACAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377503.6
ENST00000518764.1
CDS CCA 90 bp CCTCTTCCACAGCTCCTGACACTCTCAAAGGAGTGGATCAGATCCTaGCCAACAGCCAGCAGCATCCAGTCCTGGCAGTGCCAACTGTGG +
Preference number: 5 (lower is better)
Translates to: PLPQLLTLSKEWIRS*PTASSIQSWQCQLW
Trigger: CCACAGTTGGCACTGCCAGGACTGGATGCTGCTGGCTGTTGGCCAGGATCTGATCCACTCCTTTGAGAGTGTCAGGAGCTGTGGAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518764.1
CDS-3UTR CAA 90 bp GCGGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: AAPATVSRTGKGLRNPRQFICSN*GTWSSR
Trigger: TCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAA...CTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGGTCCCGATGTCCCCCTCCATGCTGGTTCTCTGTCACAGGTCCAATTCTTGGATCCTTGAGGCACTCTTaGGTCTTGCGGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RSRCPPPCWFSVTGPILGSLRHS*VLRGQV
Trigger: CACCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGA...TCCAAGAATTGGACCTGTGACAGAGAACCAGCATGGAGGGGGACATCGGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CAA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTGCATCCTTGAGGACGTaGTCATACACTACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGASLRT*SYTTSR
Trigger: CCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGC...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000644313.1
CDS-3UTR CAA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCGCCAAGGCCTGGCTCTaGACGGCTACGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACAKAWL*TATASL
Trigger: CAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGC...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: EVWRWPICQSSRWGTCGSRVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...GGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGCCCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: GPCHSLQDWQGAKESKTGRVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...ACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CAAGGCTCTTCAGGGATGGCCTCCTGCTGCCTCACTTGGCTGAGCTCTCCTCTTAGGCTCAGAGAGAGGTaGGGTCAACTGCCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: QGSSGMASCCLTWLSSPLRLRER*GQLPSN
Trigger: GTTGGAAGGCAGTTGACCCAACCTCTCTCTGAGCCT...AAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAATGTAGTCTCAGCTACTaGGGGCGGTGTGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKECSLSY*GRCGWG
Trigger: CCCCCACCCACACCGCCCCAAGTAGCTGAGACTACA...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR CAA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATGGGCACCCCTCCGGCTaGCGCAGGGAGCAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNGHPSG*RREQRD
Trigger: GTCCCTTTGCTCCCTGCGCAAGCCGGAGGGGTGCCC...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS-3UTR CAA 90 bp AATGGCCATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAACTCAGCAAGCCAGGGTaGCTCCCTTCTCGGCAAGCC +
Preference number: 5 (lower is better)
Translates to: NGHMHAKGCRDGHGTHIQLSKPG*LPSRQA
Trigger: GGCTTGCCGAGAAGGGAGCAACCCTGGCTTGCTGAG...TTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS TCA 90 bp GATACAGCCCTGAAGACTCTGCTCTCCCTGACTGGCCACGGGAGCTaGCACAGTATTACCAAGGTCCCTCAGGCTCCATCTGTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: DTALKTLLSLTGHGS*HSITKVPQAPSVSS
Trigger: GGAACTGACAGATGGAGCCTGAGGGACCTTGGTAATACTGTGTCAGCTCCCGTGGCCAGTCAGGGAGAGCAGAGTCTTCAGGGCTGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518764.1
ENST00000521643.1
CDS CCA 90 bp TACCTTCCACAGCTCCTGACACTCTCAAAGGAGTGGATCAGATCCTaGCCAACAGCCAGCAGCATCCAGTCCTGGCAGTGCCAACTGTGG +
Preference number: 5 (lower is better)
Translates to: YLPQLLTLSKEWIRS*PTASSIQSWQCQLW
Trigger: CCACAGTTGGCACTGCCAGGACTGGATGCTGCTGGCTGTTGGCCAGGATCTGATCCACTCCTTTGAGAGTGTCAGGAGCTGTGGAAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521643.1
CDS-3UTR CAA 90 bp TGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: CGTPLSGGRAGCEGTLTIFICSN*GTWSSR
Trigger: TCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAA...GATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: EVWRWPICQSSRWGTCGSFICSN*GTWSSR
Trigger: TCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAA...GGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCCCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: GTATKPSFCTLATRGRRFPRAVY*LQLGDV
Trigger: CACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGG...GAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTCTGGCCCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: GLALDGYGILEDVVIHSGPRAVY*LQLGDV
Trigger: CACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGG...GCCAGAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTAGGCACTCTTTGGTCTaGCGGGGGCAGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPRHSLV*RGQVVG
Trigger: GCCCACCACCTGCCCCCGCAAGACCAAAGAGTGCCT...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGGCCAAGGCCTGGCTCTaGACGGCTACGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKAKAWL*TATASL
Trigger: CAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGC...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAGCCAAGGCCTGGCTCTaGACGGCTACGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: SSVVTCGSITSWVQTWVPAKAWL*TATASL
Trigger: CAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGC...TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACGCCAAGGCCTGGCTCTaGACGGCTACGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHAKAWL*TATASL
Trigger: CAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGC...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTCTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PCHSLQDWQGAKESKTGILLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFRVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ATGGGAGTGCCCAAGGGTGGAAGAAATACAAGTGGATCCCTCTGGCTGAAGGCCTCAGCTCCCGAGGTCTaGCTGCTGCCCCCAATATTC +
Preference number: 5 (lower is better)
Translates to: MGVPKGGRNTSGSLWLKASAPEV*LLPPIF
Trigger: GAATATTGGGGGCAGCAGCAAGACCTCGGGAGCTGA...GGCCTTCAGCCAGAGGGATCCACTTGTATTTCTTCCACCCTTGGGCACTCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGTCAGCTCCCGAGGTCTaGCTGCTGCCCCCAATATTC +
Preference number: 5 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLSAPEV*LLPPIF
Trigger: GAATATTGGGGGCAGCAGCAAGACCTCGGGAGCTGA...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp GGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCCAAAGAGGGAGGGATTaGTCCAAAGTGAGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: GTATKPSFCTLATRGRRFQRGRD*SKVRWV
Trigger: CACCCACCTCACTTTGGACAAATCCCTCCCTCTTTG...GAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS TCA 90 bp CCTCCTGAGAGTCTCGGCTGTCCCAGGAAATGGGACCTCAGGGCCTaGATGGGAGGCAACGATTCCCTCCATACCCTTCTTAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: PPESLGCPRKWDLRA*MGGNDSLHTLLSFP
Trigger: AGGAAAACTAAGAAGGGTATGGAGGGAATCGTTGCCTCCCATTCAGGCCCTGAGGTCCCATTTCCTGGGACAGCCGAGACTCTCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520748.1
CDS CCA 90 bp AGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTaGGGACGTGGTCTTCCCGATCCTCGAACTTACCAGGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SSGCSGSSCCLFAPT*GRGLPDPRTYQGLP
Trigger: AGGCAGCCCCTGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377503.6
CDS CCA 90 bp AGGTCCCTCAGGCTCCATCTGTCAGTTCCAGAAATTCAGTCACCTTaGAGAAAGCCTTCTGGCAGCAGAACTGGTTTGGGGACCCCGGGT +
Preference number: 5 (lower is better)
Translates to: RSLRLHLSVPEIQSP*RKPSGSRTGLGTPG
Trigger: ACCCGGGGTCCCCAAACCAGTTCTGCTGCCAGAAGGCTTTCTCCAAGGTGACTGAATTTCTGGAACTGACAGATGGAGCCTGAGGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521643.1
CDS-3UTR CAA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPFICSN*GTWSSR
Trigger: TCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAA...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTAGGCACTCTTTGGTCTaGCGGGGGCAGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTRHSLV*RGQVVG
Trigger: GCCCACCACCTGCCCCCGCAAGACCAAAGAGTGCCT...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATGCCAAGGCCTGGCTCTaGACGGCTACGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHAKAWL*TATASL
Trigger: CAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGC...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTCTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: ALERFTTFRSDSAADSCLLLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AAGGCAAACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 5 (lower is better)
Translates to: KANTQAYTPTQAPLHRARHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...CCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGCAGCGGTTGGTACGAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 5 (lower is better)
Translates to: GMQGRARDTYPRAAAVGTKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...CGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCTGCCTTTGCTTCCACGGTCCTTaGCACCTCCCAGTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: ALERFTTFRSDSAADSCLCFHGP*HLPVLL
Trigger: CAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCA...AAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACCCCTCAGCCCCGCCCTaGGCGGTGTCAAACACACTC +
Preference number: 5 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYPSAPP*AVSNTL
Trigger: GAGTGTGTTTGACACCGCCAAGGGCGGGGCTGAGGG...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp ATGCTTGAGATCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAATGTAGTCTCAGCTACTaGGGGCGGTGTGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: MLEISGLCPVPTLLASYQCSLSY*GRCGWG
Trigger: CCCCCACCCACACCGCCCCAAGTAGCTGAGACTACA...TTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR CAA 90 bp GTGTTTATTGTGGGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCCACTCAGACCAGGCTTaGGGGACCTTCTCAAAAACA +
Preference number: 5 (lower is better)
Translates to: VFIVGRLFLGVVLAVREPHSDQA*GTFSKT
Trigger: TGTTTTTGAGAAGGTCCCCAAAGCCTGGTCTGAGTG...GGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS CCA 90 bp ACGATTCCCTCCATACCCTTCTTAGTTTTCCTGCAAGTCCCAGGATaGCAGCCCCGCCTGGGCTATCTCCCATCTGCTTTCACTAAGCAC +
Preference number: 5 (lower is better)
Translates to: TIPSIPFLVFLQVPG*QPRLGYLPSAFTKH
Trigger: GTGCTTAGTGAAAGCAGATGGGAGATAGCCCAGGCGGGGCTGCCATCCTGGGACTTGCAGGAAAACTAAGAAGGGTATGGAGGGAATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520748.1
CDS CCA 90 bp CTGAGAGTCTCGGCTGTCCCAGGAAATGGGACCTCAGGGCCTGAATaGGAGGCAACGATTCCCTCCATACCCTTCTTAGTTTTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LRVSAVPGNGTSGPE*EATIPSIPFLVFLQ
Trigger: TTGCAGGAAAACTAAGAAGGGTATGGAGGGAATCGTTGCCTCCCATTCAGGCCCTGAGGTCCCATTTCCTGGGACAGCCGAGACTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520748.1
CDS-3UTR CAA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGCCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLPRAVY*LQLGDV
Trigger: CACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGG...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CCTCCTAGAGAAGGCTCCAGGTCATTCTGCAGCTTGCTCAGGCTTGAAAACCTCGCTCCAGGGAATAGCTaGAGATCCTCTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: PPREGSRSFCSLLRLENLAPGNS*RSSAGL
Trigger: GAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGC...GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCTGGAGCCTTCTCTAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp TGCTCCAACTTGGGGACGTGGTCTTCCCGATCCTCGAACTTACCAGTGAGAAACGCTCCAGGGAATAGCTaGAGATCCTCTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: CSNLGTWSSRSSNLPVRNAPGNS*RSSAGL
Trigger: GAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGC...GTTTCTCACTGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643539.1
CDS-3UTR CAA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGACGGCTACGGCATCCTaGAGGACGTTGTCATACACT +
Preference number: 5 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLTATAS*RTLSYT
Trigger: AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGT...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 5 (lower is better)
Translates to: LRHTHQLRPLCIEPGKEKHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...CTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 5 (lower is better)
Translates to: SAALERFTTFRSDSAADSHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CATATGCATGCTAAGGGATGCAGGGACGGGCACGGGACACATATCCAAGGGCTGGATCCAACCAGTCGCTaGCCTATCAATGGTGGTATC +
Preference number: 5 (lower is better)
Translates to: HMHAKGCRDGHGTHIQGLDPTSR*PINGGI
Trigger: GATACCACCATTGATAGGCAAGCGACTGGTTGGATC...CAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCAATATGCTTCCACGGTCCTTaGCACCTCCCAGTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: THQLRPLCIEPGKEKHPICFHGP*HLPVLL
Trigger: CAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCA...TATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGACGCCTCTTTCTGGGGGTCGTGCTGGCTGTGAGGGAACCCTCACAATCCCCAGACAGATACAAGAACTaGAATCCAAACTGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: GRLFLGVVLAVREPSQSPDRYKN*NPNCLH
Trigger: GTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTC...TGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAAAGAGGCGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCAACCCAAGACTTGCCTaGTCTCTGAATCCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: GTATKPSFCTLATRGRRFNPRLA*SLNPQN
Trigger: GTTTTGGGGATTCAGAGACAAGGCAAGTCTTGGGTT...GAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTGAGGATGGCGCCTGCTaGTGCTCACCAATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPEDGAC*CSPMPS
Trigger: GGAAGGCATTGGTGAGCACAAGCAGGCGCCATCCTC...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS CCA 90 bp GTTCTCTGTCACAGGTCCAATTCTTGGATCTCTCCGCTTTCCTCCTaGATCACTCTGTGGAGTGGCTCCAAAGCTCTTCCCTCCACACCT +
Preference number: 5 (lower is better)
Translates to: VLCHRSNSWISPLSS*ITLWSGSKALPSTP
Trigger: AGGTGTGGAGGGAAGAGCTTTGGAGCCACTCCACAGAGTGATCCAGGAGGAAAGCGGAGAGATCCAAGAATTGGACCTGTGACAGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CAA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCATCCTTGAGGCACTCTTaGGTCTTGCGGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSSLRHS*VLRGQV
Trigger: CACCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGA...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TCAGCTGCTCTGGAAAGATTCACCACCTTCCGATCTGACTCAGCAGCAGACAGCGCATCCTTGAGGACGTaGTCATACACTACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SAALERFTTFRSDSAADSASLRT*SYTTSR
Trigger: CCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGC...GCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000644313.1
CDS-3UTR CAA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 5 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGTCCTGAGAACACGCCAGGCTGCCCCTCCTTTTTCAGCGGTGTAGCTGCCATCAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 5 (lower is better)
Translates to: GPENTPGCPSFFSGVAAISKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...GATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTTCTCAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGGGCAAGACAGAAGTCTaGAGTGAGACTCCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLGKTEV*SETPFK
Trigger: CTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp GGCCTGGCTCTTGACGGCTACGGCATCCTTGAGGACGTTGTCATACACTCTGGCGCAGCTTGCTCAGGCTaGAAAACCTCTGAATTTAAC +
Preference number: 5 (lower is better)
Translates to: GLALDGYGILEDVVIHSGAACSG*KTSEFN
Trigger: GTTAAATTCAGAGGTTTTCAAGCCTGAGCAAGCTGC...GCCAGAGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CAA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACAGGGACAGGCTCAGGTaGCAAGCAGGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYRDRLR*QAGGRR
Trigger: TCTCCTGCCTCCTGCTTGCAACCTGAGCCTGTCCCT...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643539.1
CDS TCA 90 bp ATACAACACATTCCTGAGGACGGCTCAAAAGACGTCACTGCAGAATaGATCAACCACGTCTCAGCAAGCCAGGGTTGCTCCCTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: IQHIPEDGSKDVTAE*INHVSASQGCSLLG
Trigger: GCCGAGAAGGGAGCAACCCTGGCTTGCTGAGACGTGGTTGATTCATTCTGCAGTGACGTCTTTTGAGCCGTCCTCAGGAATGTGTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS CCA 90 bp CTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAACTTACCTGTAGTCTCAGCTACTTGG +
Preference number: 5 (lower is better)
Translates to: LLRILVLFICSNLGT*SSRSSNLPVVSATW
Trigger: CCAAGTAGCTGAGACTACAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR CAA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAFICSN*GTWSSR
Trigger: TCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAA...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGCCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGPRAVY*LQLGDV
Trigger: CACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGG...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCATCCTTGAGGACGTaGTCATACACTACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TQAYTPTQAPLHRARERKASLRT*SYTTSR
Trigger: CCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGC...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000644313.1
CDS-3UTR CAA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACACGGCTACGGCATCCTaGAGGACGTTGTCATACACT +
Preference number: 5 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHTATAS*RTLSYT
Trigger: AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGT...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGGACTAAGCAAATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGGCCAAGGCCTGGCTCTaGACGGCTACGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: GTKQIFHIAILRYQPHSKAKAWL*TATASL
Trigger: CAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGC...CTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACTCCCCAAATACCTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LAYQWWYQTPMYIPLPKYLLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...GTATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 5 (lower is better)
Translates to: GTATKPSFCTLATRGRRFKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...GAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTCCCAGTTCTGCTGGGTGAACAATGTGTCCCCCAACCCCAAACTAAACCAAAGCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: LPVLLGEQCVPQPQTKPKRVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAGATCCAACCAGTCGCTaGCCTATCAATGGTGGTATC +
Preference number: 5 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKEDPTSR*PINGGI
Trigger: GATACCACCATTGATAGGCAAGCGACTGGTTGGATC...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGCTTCCACGGTCCTTaGCACCTCCCAGTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: TRGRRFSEECSRVRYVIECFHGP*HLPVLL
Trigger: CAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCA...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GAGGTCTGGAGGTGGCCTATCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCTTGAATCCAAACTGCTaGCACATAAATAGAACGGAG +
Preference number: 5 (lower is better)
Translates to: EVWRWPICQSSRWGTCGSLNPNC*HINRTE
Trigger: CTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAA...GGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATAGGCTCAGAGAGAGGTaGGGTCAACTGCCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHRLRER*GQLPSN
Trigger: GTTGGAAGGCAGTTGACCCAACCTCTCTCTGAGCCT...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGGCCGAGGCAGTCAGATaGCTTGAGCTCAGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKAEAVR*LELRSL
Trigger: CAGACTCCTGAGCTCAAGCAATCTGACTGCCTCGGC...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAAGCATCCTTGAGGACGTaGTCATACACTCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQASLRT*SYTLAS
Trigger: GGAAGCCAGAGTGTATGACAACGTCCTCAAGGATGC...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTACAGAGCTCTGGTCTTaGATGCAGAGGAGTTTGCAA +
Preference number: 5 (lower is better)
Translates to: PCHSLQDWQGAKESKTGITELWS*MQRSLQ
Trigger: TTGCAAACTCCTCTGCATCAAAGACCAGAGCTCTGT...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CAA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTCTAAGGGCTTCCGCTTaGCCCACACAGCCCACCAGT +
Preference number: 5 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGLRASA*PTQPTS
Trigger: ACTGGTGGGCTGTGTGGGCAAAGCGGAAGCCCTTAG...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CAA 90 bp GTCTTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAATTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: VFLRALSLQIPKYWLLIQFICSN*GTWSSR
Trigger: TCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAA...TTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGAAGGCACTCTTTGGTCTaGCGGGGGCAGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGRHSLV*RGQVVG
Trigger: GCCCACCACCTGCCCCCGCAAGACCAAAGAGTGCCT...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACACTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTLLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAACTCCTGCTGCCTCACTaGGCTGAGCTCTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: STLLSFAISHTQSLDWVKLLLPH*AELSSS
Trigger: TGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAG...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TCTGTCAAAGCAGCCGGTGGGGAACATGTGGCTCCCACTGAAGTAGCTGCTTCCAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 5 (lower is better)
Translates to: SVKAAGGEHVAPTEVAASKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...GGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGGATCCAACCAGTCGCTaGCCTATCAATGGTGGTATC +
Preference number: 5 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGDPTSR*PINGGI
Trigger: GATACCACCATTGATAGGCAAGCGACTGGTTGGATC...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 5 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CATCTGAAAAGGGGGACCAGCAGGATTTCAATACACGTGCTGAGGTGCTCCAGGCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 5 (lower is better)
Translates to: HLKRGTSRISIHVLRCSRPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...CCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTCCCCCTTTTCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CAA 90 bp TCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGACAGTGCTTCCACGGTCCTTaGCACCTCCCAGTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SQVGFKLGFQINSPHVGQCFHGP*HLPVLL
Trigger: CAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCA...CTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATGCTTCCACGGTCCTTaGCACCTCCCAGTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTCFHGP*HLPVLL
Trigger: CAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCA...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GGGGACGGCCACCAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: GDGHQAILLYPSHTWQTFQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...AAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGCCTAGACTGGGTTAAACTCATGCCCTGTAAGTATGTGGTGGAGAGAGGTGGGAGGTCATTCTGCAGCTaGCTCAGGCTTGAAAACCTC +
Preference number: 5 (lower is better)
Translates to: SLDWVKLMPCKYVVERGGRSFCS*LRLENL
Trigger: GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCT...CCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp AGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAGGTCATTCTGCAGCTaGCTCAGGCTTGAAAACCTC +
Preference number: 5 (lower is better)
Translates to: SSVVTCGSITSWVQTWVPRSFCS*LRLENL
Trigger: GAGGTTTTCAAGCCTGAGCAAGCTGCAGAATGACCT...TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGGAGGATGGCGCCTGCTaGTGCTCACCAATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQEDGAC*CSPMPS
Trigger: GGAAGGCATTGGTGAGCACAAGCAGGCGCCATCCTC...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAAGGCACTCTTTGGTCTaGCGGGGGCAGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKRHSLV*RGQVVG
Trigger: GCCCACCACCTGCCCCCGCAAGACCAAAGAGTGCCT...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTTCCTTGAGGCACTCTTaGGTCTTGCGGGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVSLRHS*VLRGQV
Trigger: CACCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGA...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAATTAACAGCCCTCATGTGGGCTCCAGGGAATAGCTaGAGATCCTCTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: VHHKLGSNLGSKLTALMWAPGNS*RSSAGL
Trigger: GAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGC...CCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGCTCCAGGGAATAGCTaGAGATCCTCTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: FRNRELGKWFSPTICLQKAPGNS*RSSAGL
Trigger: GAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGC...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAGCATCCTTGAGGACGTaGTCATACACTACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKASLRT*SYTTSR
Trigger: CCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGC...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000644313.1
CDS-3UTR CAA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCAACGGCTACGGCATCCTaGAGGACGTTGTCATACACT +
Preference number: 5 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSTATAS*RTLSYT
Trigger: AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGT...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 5 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: SVSSSHSPGLLSSLSRFTRVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...AGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACGATCCAACCAGTCGCTaGCCTATCAATGGTGGTATC +
Preference number: 5 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHDPTSR*PINGGI
Trigger: GATACCACCATTGATAGGCAAGCGACTGGTTGGATC...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GAGGGTGAAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTTGATCCAACCAGTCGCTaGCCTATCAATGGTGGTATC +
Preference number: 5 (lower is better)
Translates to: EGEVLAAQDPRAVYLLQLDPTSR*PINGGI
Trigger: GATACCACCATTGATAGGCAAGCGACTGGTTGGATC...AAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 5 (lower is better)
Translates to: QAILLYPSHTWQTFLRGMPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...CATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCGCAGCTTGCTCAGGCTaGAAAACCTCTGAATTTAAC +
Preference number: 5 (lower is better)
Translates to: ALSLQIPKYWLLIQPVACAACSG*KTSEFN
Trigger: GTTAAATTCAGAGGTTTTCAAGCCTGAGCAAGCTGC...GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATTCTGTCCTGTTTGCCTaGCTCCCTGCAGTAACTATG +
Preference number: 5 (lower is better)
Translates to: DVESSGTESWENGSLQPYSVLFA*LPAVTM
Trigger: CATAGTTACTGCAGGGAGCAAGGCAAACAGGACAGA...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS TCA 90 bp GAAGTAACCACCACAGGCTGCTCCACAGTAGATACAACACATTCCTaGGGACGGCTCAAAAGACGTCACTGCAGAATGAATCAACCACGT +
Preference number: 5 (lower is better)
Translates to: EVTTTGCSTVDTTHS*GRLKRRHCRMNQPR
Trigger: ACGTGGTTGATTCATTCTGCAGTGACGTCTTTTGAGCCGTCCTCAGGAATGTGTTGTATCTACTGTGGAGCAGCCTGTGGTGGTTACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CAA 90 bp TCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCAGTCGCTTGCCTATCATTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: SLQIPKYWLLIQPVACLSFICSN*GTWSSR
Trigger: TCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAA...TGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGCCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAPRAVY*LQLGDV
Trigger: CACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGG...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACACCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTPRAVY*LQLGDV
Trigger: CACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGG...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTACGGCTACGGCATCCTaGAGGACGTTGTCATACACT +
Preference number: 5 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGTATAS*RTLSYT
Trigger: AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGT...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTCACCAAGCCATCCTTTaGTACCCTAGCCACACGTGG +
Preference number: 5 (lower is better)
Translates to: EECSRVRYVIECFALGQFHQAIL*YPSHTW
Trigger: CCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTG...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTCGGGTCCATCACAAGTaGGGTTCAAACTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGRVHHK*GSNLGS
Trigger: GGAACCCAAGTTTGAACCCAACTTGTGATGGACCCG...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGCACCCTTGAATCCAAACTGCTaGCACATAAATAGAACGGAG +
Preference number: 5 (lower is better)
Translates to: AYTPTQAPLHRARERKAPLNPNC*HINRTE
Trigger: CTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAA...GGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ACACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAGACAGATACAAGAACTaGAATCCAAACTGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: TLRHTHQLRPLCIEPGKEDRYKN*NPNCLH
Trigger: GTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTC...TTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGACAGATACAAGAACTaGAATCCAAACTGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: FKRSTDPPRSKALQGWPPDRYKN*NPNCLH
Trigger: GTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTC...AGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGGACAGATACAAGAACTaGAATCCAAACTGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: FCTLATRGRRFSEECSRVDRYKN*NPNCLH
Trigger: GTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTC...CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATAACCCAAGACTTGCCTaGTCTCTGAATCCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHNPRLA*SLNPQN
Trigger: GTTTTGGGGATTCAGAGACAAGGCAAGTCTTGGGTT...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACACAAAGAGGGAGGGATTaGTCCAAAGTGAGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTQRGRD*SKVRWV
Trigger: CACCCACCTCACTTTGGACAAATCCCTCCCTCTTTG...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp ATTTTCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTGCATCCTTGAGGACGTaGTCATACACTCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: IFHIAILRYQPHSKPRLGASLRT*SYTLAS
Trigger: GGAAGCCAGAGTGTATGACAACGTCCTCAAGGATGC...ACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643836.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACAAAGCAGGAGAATTGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTKQENC*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCTT...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR CAA 90 bp TTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAACAGCCCGCTTCTCCCTaGCTGCCTGACTTTAAAGAT +
Preference number: 5 (lower is better)
Translates to: FRNRELGKWFSPTICLQKQPASP*LPDFKD
Trigger: ATCTTTAAAGTCAGGCAGCAAGGGAGAAGCGGGCTG...TTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS-3UTR CAA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCCCTCGTGCTGTTTATTaGCTCCAACTTGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: CVNKTSYETESKTTSGSSPRAVY*LQLGDV
Trigger: CACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGG...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTACGGCTACGGCATCCTaGAGGACGTTGTCATACACT +
Preference number: 5 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCTATAS*RTLSYT
Trigger: AGTGTATGACAACGTCCTCAAGGATGCCGTAGCCGT...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTAAAAGGAGCACAGACCCTCCACGTTCCAAGGCTCTTCAGGGATGGCCTCCTGGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 5 (lower is better)
Translates to: LKGAQTLHVPRLFRDGLLELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...CAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CCCTGCCACAGTCTCCAGGACTGGCAAGGGGCTAAGGAATCCAAGACAGGTATTGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 5 (lower is better)
Translates to: PCHSLQDWQGAKESKTGIELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...AATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTCCAAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 5 (lower is better)
Translates to: SSVVTCGSITSWVQTWVPSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 5 (lower is better)
Translates to: QAILLYPSHTWQTFLRGMSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...CATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 5 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ACACGTGGCAGACGTTTCTCAGAGGAATGCTCTCGGGTGAGGTATGTTATTGAACCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 5 (lower is better)
Translates to: TRGRRFSEECSRVRYVIEPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...TTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TCAGTGGTCTGTGTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGGACAGATACAAGAACTaGAATCCAAACTGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: SVVCVQFPLSWPLIKSFSDRYKN*NPNCLH
Trigger: GTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTC...CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ACAAAAATTGCTTCCACGGTCCTTTGCACCTCCCAGTTCTGCTGGGTGAACAATCTCATTTGCTCCCATTaGAACCATGCTGCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: TKIASTVLCTSQFCWVNNLICSH*NHAASE
Trigger: TTCAGAGGCAGCATGGTTCAAATGGGAGCAAATGAG...ATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCAATTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTAGAGCGAAACTCCGTTaGCAAGCAGGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVRAKLR*QAGGRR
Trigger: TCTCCTGCCTCCTGCTTGCAAACGGAGTTTCGCTCT...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR CAA 90 bp GTGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGAAGCAGGAGAATTGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: VCKQDILRNRKQDHFGKQKQENC*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCTT...CTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS-3UTR CAA 90 bp TGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTATTTCCAGATTCCTTTaGTGGATTCTCCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: WNLPEPRAGKMVLSNHMPISRFL*WILLGA
Trigger: AGCTCCCAGGAGAATCCACAAAAGGAATCTGGAAAT...AGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS-3UTR CAA 90 bp GACGTGGAATCTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 5 (lower is better)
Translates to: DVESSGTESWENGSLQPYKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...ATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GTCCAGTTCCCACTCTCCTGGCCTCTTATCAAGTCTTTCTCGATTCACTGGGCCGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 5 (lower is better)
Translates to: VQFPLSWPLIKSFSIHWAELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...GGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCGATCCAACCAGTCGCTaGCCTATCAATGGTGGTATC +
Preference number: 5 (lower is better)
Translates to: CVNKTSYETESKTTSGSSDPTSR*PINGGI
Trigger: GATACCACCATTGATAGGCAAGCGACTGGTTGGATC...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTATGCTTCCACGGTCCTTaGCACCTCCCAGTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: CSRVRYVIECFALGQFYLCFHGP*HLPVLL
Trigger: CAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGCA...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACATCCCACCAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: PTSRLPINGGIKRPCTSHQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...GTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TTCCTGAGGGCCCTCTCGCTGCAGATCCCTAAATACTGGCTTTTGATCCAACCACAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: FLRALSLQIPKYWLLIQPQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...TGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGCTCTGTGGTTACCTGCGGGTCCATCACAAGTTGGGTTCAAACTTGGGTTCCACAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SSVVTCGSITSWVQTWVPQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...TGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCACAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CAAGCCATCCTTTTGTACCCTAGCCACACGTGGCAGACGTTTCTCAGAGGAATGTTGAATCCAAACTGCTaGCACATAAATAGAACGGAG +
Preference number: 5 (lower is better)
Translates to: QAILLYPSHTWQTFLRGMLNPNC*HINRTE
Trigger: CTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAA...CATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTAGGACAAGAGGTGAGAGATCAAGAGCAGGTGACGTGTTTATTGTGGGACGCCATCCAGAAAGGACACTaGCATGCTAGTTTATCTATG +
Preference number: 5 (lower is better)
Translates to: LGQEVRDQEQVTCLLWDAIQKGH*HASLSM
Trigger: CATAGATAAACTAGCATGCAAGTGTCCTTTCTGGAT...GGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCACCTCTTGTCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp ACTCAGGCATACACACCAACTCAGGCCCCTCTGCATAGAGCCAGGGAAAGAAAAGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 5 (lower is better)
Translates to: TQAYTPTQAPLHRARERKELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...TTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTTCCGGAACCGAGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 5 (lower is better)
Translates to: LPEPRAGKMVLSNHMPSKSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...TTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TGGGTAGTTATTAAAGTTCTAGTGGTGAACACAGCCTCCAAGACGTGGAATCTTGATCCAACCAGTCGCTaGCCTATCAATGGTGGTATC +
Preference number: 5 (lower is better)
Translates to: WVVIKVLVVNTASKTWNLDPTSR*PINGGI
Trigger: GATACCACCATTGATAGGCAAGCGACTGGTTGGATC...AAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACTTGAATCCAAACTGCTaGCACATAAATAGAACGGAG +
Preference number: 5 (lower is better)
Translates to: SNHMPSKRKLCGYLRVHHLNPNC*HINRTE
Trigger: CTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAA...GTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp ACAACAAATGAACGTGCAGCCTCCTATGCTAGTGTGACACGGTGGCAGAGTCTTTTGAATCCAAACTGCTaGCACATAAATAGAACGGAG +
Preference number: 5 (lower is better)
Translates to: TTNERAASYASVTRWQSLLNPNC*HINRTE
Trigger: CTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAA...AAGACTCTGCCACCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TGTGTAAACAAGACATCTTACGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCCTCATTTGCTCCCATTaGAACCATGCTGCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: CVNKTSYETESKTTSGSSLICSH*NHAASE
Trigger: TTCAGAGGCAGCATGGTTCAAATGGGAGCAAATGAG...GCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGTTTACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp TTTGATCCAACCAGTCGCTTGCCTATCAATGGTGGTATCAAACGCCCATGTACAAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 5 (lower is better)
Translates to: FDPTSRLPINGGIKRPCTKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...TGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTATTAAAGTTCTAGTGGTGAACAAGTTGGGTTCAAACTaGGGTTCCAAATTAACAGCC +
Preference number: 5 (lower is better)
Translates to: PFNELLPPWVVIKVLVVNKLGSN*GSKLTA
Trigger: GGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTT...GTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 5 (lower is better)
Translates to: LSNHMPSKRKLCGYLRVHELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...ATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTCCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 5 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGGGTCCATCACAAGCAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: NHMPSKRKLCGYLRVHHKQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...CTTGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TCCACATTGCTATCCTTCGCTATCAGCCACACTCAAAGCCTAGACTGGGTTAAAGACAGATACAAGAACTaGAATCCAAACTGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: STLLSFAISHTQSLDWVKDRYKN*NPNCLH
Trigger: GTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTC...TTTAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GCCTTGATGTACATTATGTTATTTAATCCTCTTAAGAACCCTATGAGGCAAGGTGCATCCTTGAGGACGTaGTCATACACTACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ALMYIMLFNPLKNPMRQGASLRT*SYTTSR
Trigger: CCTGCTGGTAGTGTATGACAACGTCCTCAAGGATGC...ACCTTGCCTCATAGGGTTCTTAAGAGGATTAAATAACATAATGTACATCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257536.13
CDS-3UTR CAA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 5 (lower is better)
Translates to: EECSRVRYVIECFALGQFSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 5 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGCAAGACAGAAGTCTaGAGTGAGACTCCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKGKTEV*SETPFK
Trigger: CTTGAAGGGAGTCTCACTCAAGACTTCTGTCTTGCC...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp AATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTGGTTACCTGCGATCCAGAAAGGACACTaGCATGCTAGTTTATCTATG +
Preference number: 5 (lower is better)
Translates to: NGSLQPYAFKKEALWLPAIQKGH*HASLSM
Trigger: CATAGATAAACTAGCATGCAAGTGTCCTTTCTGGAT...CGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257536.13
ENST00000644926.1
CDS-3UTR CAA 90 bp TACAAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAACCTAAATACTGGCTTTaGATCCAACCAGTCGCTTGC +
Preference number: 5 (lower is better)
Translates to: YKNLNPNCLHINRTEVGKPKYWL*IQPVAC
Trigger: GCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGG...TTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAACAAACAAAACAAAAATaGCTTCCACGGTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKQTKQK*LPRSFA
Trigger: TGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTG...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp GAGGAATGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTTGAATCCAAACTGCTaGCACATAAATAGAACGGAG +
Preference number: 5 (lower is better)
Translates to: EECSRVRYVIECFALGQFLNPNC*HINRTE
Trigger: CTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAA...AAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AGAGCTGGGAAAATGGTTCTCTCCAACCATATGCCTTCAAAAAGGAAGCTCTGTTTGAATCCAAACTGCTaGCACATAAATAGAACGGAG +
Preference number: 5 (lower is better)
Translates to: RAGKMVLSNHMPSKRKLCLNPNC*HINRTE
Trigger: CTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAA...ACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AACTGTTTAAATCTTTGTCTTCCTTTCAACGAGCTTCTCCCTCCCTGGGTAGTTGACAGATACAAGAACTaGAATCCAAACTGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: NCLNLCLPFNELLPPWVVDRYKN*NPNCLH
Trigger: GTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTC...AACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp CGAAACAGAAAGCAAGACCACTTCGGGAAGCAGCAGCACATGACATATCTAAAAGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 5 (lower is better)
Translates to: RNRKQDHFGKQQHMTYLKELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...TTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp TGCTCTCGGGTGAGGTATGTTATTGAATGTTTTGCTCTGGGTCAGTTTTATTTAAGCAAATTTTCCACATaGCTATCCTTCGCTATCAGC +
Preference number: 5 (lower is better)
Translates to: CSRVRYVIECFALGQFYLSKFST*LSFAIS
Trigger: GCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCT...TAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS-3UTR CAA 90 bp AAGAACTTGAATCCAAACTGCTTGCACATAAATAGAACGGAGGTTGGCAAAGGAGAACTGTTTAAATCTTaGTCTTCCTTTCAACGAGCT +
Preference number: 5 (lower is better)
Translates to: KNLNPNCLHINRTEVGKGELFKS*SSFQRA
Trigger: AGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTC...TCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATTCAAGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000541762.5
ENST00000643539.1
ENST00000643836.1
ENST00000644313.1
ENST00000644926.1
CDS CCA 72 bp CCCGGCTCTCAGGGCGCACCGCATCCTCTCTGGGCGTaGGGGGCTGCGAGCGCCGGGCCCCTCCCAGTGCCG +
Preference number: 6 (lower is better)
Translates to: PGSQGAPHPLWA*GAASAGPLPVP
Trigger: CGGCACTGGGAGGGGCCCGGCGCTCGCAGCCCCCCACGCCCAGAGAGGATGCGGTGCGCCCTGAGAGCCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000519673.1
ENST00000520748.1
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS GCA 72 bp GCGAGCGCCGGGCCCCTCCCAGTGCCGAGCCAGCCGTaGCCTCTGGTGCCTGCCGGCGGTTGGACCCTCGTC +
Preference number: 6 (lower is better)
Translates to: ASAGPLPVPSQP*PLVPAGGWTLV
Trigger: GACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCACTGGGAGGGGCCCGGCGCTCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000519673.1
ENST00000520748.1
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS CCA 72 bp CCGGGCCCCTCCCAGTGCCGAGCCAGCCGTGCCCTCTaGTGCCTGCCGGCGGTTGGACCCTCGTCCGAGGCG +
Preference number: 6 (lower is better)
Translates to: PGPSQCRASRAL*CLPAVGPSSEA
Trigger: CGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCACTGGGAGGGGCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000519673.1
ENST00000520748.1
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS CAA 90 bp CCTCCCAGTGCCGAGCCAGCCGTGCCCTCTGGTGCCTGCCGGCGGTaGGACCCTCGTCCGAGGCGCTCCGCACTCCCGACGGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: PPSAEPAVPSGACRR*DPRPRRSALPTAAS
Trigger: GGAGGCGGCCGTCGGGAGTGCGGAGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCACTGGGAGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000520748.1
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS CCA 72 bp CCGAGCCAGCCGTGCCCTCTGGTGCCTGCCGGCGGTTaGACCCTCGTCCGAGGCGCTCCGCACTCCCGACGG +
Preference number: 6 (lower is better)
Translates to: PSQPCPLVPAGG*TLVRGAPHSRR
Trigger: CCGTCGGGAGTGCGGAGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000520748.1
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS CAA 72 bp GCCGAGCCAGCCGTGCCCTCTGGTGCCTGCCGGCGGTaGGACCCTCGTCCGAGGCGCTCCGCACTCCCGACG +
Preference number: 6 (lower is better)
Translates to: AEPAVPSGACRR*DPRPRRSALPT
Trigger: CGTCGGGAGTGCGGAGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000520748.1
ENST00000643539.1
ENST00000643836.1
ENST00000644926.1
CDS CCA 72 bp TCCTGGGAGCTTCGACCCTTCTCGCGCAGGGTGCAGTaGACGTCCGAGGCGACGCGCCCTTCCCACCACGGC +
Preference number: 6 (lower is better)
Translates to: SWELRPFSRRVQ*TSEATRPSHHG
Trigger: GCCGTGGTGGGAAGGGCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGGGTCGAAGCTCCCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS GCA 72 bp ACCGCGGCGCCACCTGCGCGCACCACGCGTGAAACGTaGGGACAGGACGCCCCCAGAAAGTTCTGCCTTCCG +
Preference number: 6 (lower is better)
Translates to: TAAPPARTTRET*GQDAPRKFCLP
Trigger: CGGAAGGCAGAACTTTCTGGGGGCGTCCTGTCCGCACGTTTCACGCGTGGTGCGCGCAGGTGGCGCCGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS CCA 72 bp GTGGGCAGCTTCAGTTCCTTCTCGCGCAGGGTGCAGTaGACGTCCGAGGCGACGCGCCCTTCCCACCACGGC +
Preference number: 6 (lower is better)
Translates to: VGSFSSFSRRVQ*TSEATRPSHHG
Trigger: GCCGTGGTGGGAAGGGCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGGAACTGAAGCTGCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000519673.1
ENST00000643539.1
ENST00000644313.1
ENST00000644926.1
CDS TCA 72 bp CAAAGGGACCGCGGCGCCACCTGCGCGCACCACGCGTaGAACGTGCGGACAGGACGCCCCCAGAAAGTTCTG +
Preference number: 6 (lower is better)
Translates to: QRDRGATCAHHA*NVRTGRPQKVL
Trigger: CAGAACTTTCTGGGGGCGTCCTGTCCGCACGTTTCACGCGTGGTGCGCGCAGGTGGCGCCGCGGTCCCTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS GCA 72 bp GGAAGGTGGGCAGCTTCAGTTCCTTCTCGCGCAGGGTaGAGTGGACGTCCGAGGCGACGCGCCCTTCCCACC +
Preference number: 6 (lower is better)
Translates to: GRWAASVPSRAG*SGRPRRRALPT
Trigger: GGTGGGAAGGGCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGGAACTGAAGCTGCCCACCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000519673.1
ENST00000643539.1
ENST00000644313.1
ENST00000644926.1
CDS GCA 72 bp GATTCTCCTGGGAGCTTCGACCCTTCTCGCGCAGGGTaGAGTGGACGTCCGAGGCGACGCGCCCTTCCCACC +
Preference number: 6 (lower is better)
Translates to: DSPGSFDPSRAG*SGRPRRRALPT
Trigger: GGTGGGAAGGGCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGGGTCGAAGCTCCCAGGAGAATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS TCA 72 bp CCTCGAACTTACCAGGGGCTGCCTCTGGCCCAGGTCTaGCGGCACTGCTGCGCTGAACGTGTGGGCACTGGG +
Preference number: 6 (lower is better)
Translates to: PRTYQGLPLAQV*RHCCAERVGTG
Trigger: CCCAGTGCCCACACGTTCAGCGCAGCAGTGCCGTCAGACCTGGGCCAGAGGCAGCCCCTGGTAAGTTCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377503.6
CDS CCA 72 bp AGGGCGCACCCTTCGCTGAGGCTAGTGGTAGCCTTCTaGGCACCCCTCCGGCTTGCGCAGGGAGCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: RAHPSLRLVVAF*APLRLAQGAKG
Trigger: TCCCTTTGCTCCCTGCGCAAGCCGGAGGGGTGCCCAGAAGGCTACCACTAGCCTCAGCGAAGGGTGCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS CCA 72 bp GGCGGCTCTTCAGGAGTGGGGAGTGGGCTCGGAAGGTaGGCAGCTTCAGTTCCTTCTCGCGCAGGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: GGSSGVGSGLGR*AASVPSRAGCS
Trigger: ACTGCACCCTGCGCGAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000519673.1
ENST00000643539.1
ENST00000644313.1
ENST00000644926.1
CDS CCA 72 bp CATAAAGTATCAAGGACCTTCTCGCGCAGGGTGCAGTaGACGTCCGAGGCGACGCGCCCTTCCCACCACGGC +
Preference number: 6 (lower is better)
Translates to: HKVSRTFSRRVQ*TSEATRPSHHG
Trigger: GCCGTGGTGGGAAGGGCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGGTCCTTGATACTTTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520748.1
CDS CCA 72 bp TCCACGAAGAACCGGCGGCTCTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGCTTCAGTTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: STKNRRLFRSGE*ARKVGSFSSWR
Trigger: CCTCCAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520748.1
CDS GCA 72 bp AGGCTCATAAAGTATCAAGGACCTTCTCGCGCAGGGTaGAGTGGACGTCCGAGGCGACGCGCCCTTCCCACC +
Preference number: 6 (lower is better)
Translates to: RLIKYQGPSRAG*SGRPRRRALPT
Trigger: GGTGGGAAGGGCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGGTCCTTGATACTTTATGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520748.1
CDS CCA 72 bp TCCACGAAGAACCGGCGGCTCTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGCTTCAGTTCCTTCTCG +
Preference number: 6 (lower is better)
Translates to: STKNRRLFRSGE*ARKVGSFSSFS
Trigger: CGAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257536.13
ENST00000393977.7
ENST00000519673.1
ENST00000643539.1
ENST00000644313.1
ENST00000644926.1
CDS CCA 72 bp TGGCCCAGGTCTGACGGCACTGCTGCGCTGAACGTGTaGGCACTGGGGACCCTGATCCTTTGTTCCGACTTG +
Preference number: 6 (lower is better)
Translates to: WPRSDGTAALNV*ALGTLILCSDL
Trigger: CAAGTCGGAACAAAGGATCAGGGTCCCCAGTGCCCACACGTTCAGCGCAGCAGTGCCGTCAGACCTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377503.6
CDS CCA 72 bp GGCGGCTCTTCAGGAGTGGGGAGTGGGCTCGGAAGGTaGGCAGCTTCAGTTCCTGTAGTCTTAGCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: GGSSGVGSGLGR*AASVPVVLAAQ
Trigger: CTGAGCAGCTAAGACTACAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377503.6
ENST00000518764.1
CDS CCA 72 bp TCCACGAAGAACCGGCGGCTCTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGCTTCAGTTCCTGTAGT +
Preference number: 6 (lower is better)
Translates to: STKNRRLFRSGE*ARKVGSFSSCS
Trigger: ACTACAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377503.6
ENST00000518764.1
CDS CAA 90 bp AGACGTCACTGCAGAATGAATCAACCACGTCTCAGCAAGCCAGGGTaGCTCCCTTCTCGGCAAGCCTTGCAGCAGCCCACTCGGTGGGTA +
Preference number: 6 (lower is better)
Translates to: RRHCRMNQPRLSKPG*LPSRQALQQPTRWV
Trigger: TACCCACCGAGTGGGCTGCTGCAAGGCTTGCCGAGAAGGGAGCAACCCTGGCTTGCTGAGACGTGGTTGATTCATTCTGCAGTGACGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS GCA 72 bp AGGACGCCCCCAGAAAGTTCTGCCTTCCGCGCGCACTaGTCTAGCCATCCTTACGTCGGTTCCACCTGTTTT +
Preference number: 6 (lower is better)
Translates to: RTPPESSAFRAH*SSHPYVGSTCF
Trigger: AAAACAGGTGGAACCGACGTAAGGATGGCTAGAGCAGTGCGCGCGGAAGGCAGAACTTTCTGGGGGCGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644313.1
CDS CCA 72 bp CGGAGATACAGCCCTGAAGACTCTGCTCTCCCTGACTaGCCACGGGAGCTGACACAGTATTACCAAGGTCCC +
Preference number: 6 (lower is better)
Translates to: RRYSPEDSALPD*PRELTQYYQGP
Trigger: GGGACCTTGGTAATACTGTGTCAGCTCCCGTGGCCAGTCAGGGAGAGCAGAGTCTTCAGGGCTGTATCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518764.1
ENST00000521643.1
CDS CCA 72 bp TCCACGAAGAACCGGCGGCTCTTCAGGAGTGGGGAGTaGGCTCGGAAGGTGGGCAGCTTCAGTTCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: STKNRRLFRSGE*ARKVGSFSSFS
Trigger: AGAAAAAGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541762.5
CDS CCA 72 bp TGCCCCCGATTTCCAGATTCCTTTTGTGGATTCTCCTaGGAGCTTCGACCCTTCTCGCGCAGGGTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: CPRFPDSFCGFS*ELRPFSRRVQW
Trigger: CCACTGCACCCTGCGCGAGAAGGGTCGAAGCTCCCAGGAGAATCCACAAAAGGAATCTGGAAATCGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS CAA 90 bp CCCGATGTCCCCCTCCATGCTGGTTCTCTGTCACAGGTCCAATTCTaGGATCTCTCCGCTTTCCTCCTGGATCACTCTGTGGAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: PDVPLHAGSLSQVQF*DLSAFLLDHSVEWL
Trigger: GAGCCACTCCACAGAGTGATCCAGGAGGAAAGCGGAGAGATCCAAGAATTGGACCTGTGACAGAGAACCAGCATGGAGGGGGACATCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643836.1
CDS TCA 72 bp CTGAAGACTCTGCTCTCCCTGACTGGCCACGGGAGCTaGCACAGTATTACCAAGGTCCCTCAGGCTCCATCT +
Preference number: 6 (lower is better)
Translates to: LKTLLSLTGHGS*HSITKVPQAPS
Trigger: AGATGGAGCCTGAGGGACCTTGGTAATACTGTGTCAGCTCCCGTGGCCAGTCAGGGAGAGCAGAGTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518764.1
ENST00000521643.1
CDS TCA 72 bp AGTCTCGGCTGTCCCAGGAAATGGGACCTCAGGGCCTaGATGGGAGGCAACGATTCCCTCCATACCCTTCTT +
Preference number: 6 (lower is better)
Translates to: SLGCPRKWDLRA*MGGNDSLHTLL
Trigger: AAGAAGGGTATGGAGGGAATCGTTGCCTCCCATTCAGGCCCTGAGGTCCCATTTCCTGGGACAGCCGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520748.1
CDS TCA 72 bp GCCTTGCAGCAGCCCACTCGGTGGGTAACGACGACCTaGCACAGAGCTCTGGTCTTTGATGCAGAGGAGTTT +
Preference number: 6 (lower is better)
Translates to: ALQQPTRWVTTT*HRALVFDAEEF
Trigger: AAACTCCTCTGCATCAAAGACCAGAGCTCTGTGTCAGGTCGTCGTTACCCACCGAGTGGGCTGCTGCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS CAA 72 bp TGCAGAATGAATCAACCACGTCTCAGCAAGCCAGGGTaGCTCCCTTCTCGGCAAGCCTTGCAGCAGCCCACT +
Preference number: 6 (lower is better)
Translates to: CRMNQPRLSKPG*LPSRQALQQPT
Trigger: AGTGGGCTGCTGCAAGGCTTGCCGAGAAGGGAGCAACCCTGGCTTGCTGAGACGTGGTTGATTCATTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS CAA 90 bp AAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGATCCTCGAACTTACCAGGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: KFWLLRILVLFICSN*GTWSSRSSNLPGAA
Trigger: GGCAGCCCCTGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377503.6
CDS CAA 90 bp AAGGTCCCTCAGGCTCCATCTGTCAGTTCCAGAAATTCAGTCACCTaGGAGAAAGCCTTCTGGCAGCAGAACTGGTTTGGGGACCCCGGG +
Preference number: 6 (lower is better)
Translates to: KVPQAPSVSSRNSVT*EKAFWQQNWFGDPG
Trigger: CCCGGGGTCCCCAAACCAGTTCTGCTGCCAGAAGGCTTTCTCCAAGGTGACTGAATTTCTGGAACTGACAGATGGAGCCTGAGGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521643.1
CDS TCA 72 bp GTGGGTAACGACGACCTGACACAGAGCTCTGGTCTTTaGTGCAGAGGAGTTTGCAAGCAGGAGGCAGGAGAC +
Preference number: 6 (lower is better)
Translates to: VGNDDLTQSSGL*CRGVCKQEAGD
Trigger: GTCTCCTGCCTCCTGCTTGCAAACTCCTCTGCATCAAAGACCAGAGCTCTGTGTCAGGTCGTCGTTACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS CCA 72 bp TCGGCTGTCCCAGGAAATGGGACCTCAGGGCCTGAATaGGAGGCAACGATTCCCTCCATACCCTTCTTAGTT +
Preference number: 6 (lower is better)
Translates to: SAVPGNGTSGPE*EATIPSIPFLV
Trigger: AACTAAGAAGGGTATGGAGGGAATCGTTGCCTCCCATTCAGGCCCTGAGGTCCCATTTCCTGGGACAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520748.1
CDS TCA 72 bp ATTCCTGAGGACGGCTCAAAAGACGTCACTGCAGAATaGATCAACCACGTCTCAGCAAGCCAGGGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: IPEDGSKDVTAE*INHVSASQGCS
Trigger: GGAGCAACCCTGGCTTGCTGAGACGTGGTTGATTCATTCTGCAGTGACGTCTTTTGAGCCGTCCTCAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS CAA 90 bp AAGTTCTGGCTGCTCAGGATCCTCGTGCTGTTTATTTGCTCCAACTaGGGGACGTGGTCTTCCCGATCCTCGAACTTACCTGTAGTCTCA +
Preference number: 6 (lower is better)
Translates to: KFWLLRILVLFICSN*GTWSSRSSNLPVVS
Trigger: TGAGACTACAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS CCA 72 bp AGGCTCCATCTGTCAGTTCCAGAAATTCAGTCACCTTaGAGAAAGCCTTCTGGCAGCAGAACTGGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: RLHLSVPEIQSP*RKPSGSRTGLG
Trigger: CCCCAAACCAGTTCTGCTGCCAGAAGGCTTTCTCCAAGGTGACTGAATTTCTGGAACTGACAGATGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521643.1
CDS CCA 72 bp ATCCTCGTGCTGTTTATTTGCTCCAACTTGGGGACGTaGTCTTCCCGATCCTCGAACTTACCTGTAGTCTCA +
Preference number: 6 (lower is better)
Translates to: ILVLFICSNLGT*SSRSSNLPVVS
Trigger: TGAGACTACAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393977.7
ENST00000541762.5
CDS TCA 72 bp ACCACAGGCTGCTCCACAGTAGATACAACACATTCCTaGGGACGGCTCAAAAGACGTCACTGCAGAATGAAT +
Preference number: 6 (lower is better)
Translates to: TTGCSTVDTTHS*GRLKRRHCRMN
Trigger: ATTCATTCTGCAGTGACGTCTTTTGAGCCGTCCTCAGGAATGTGTTGTATCTACTGTGGAGCAGCCTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644926.1
CDS CCA 72 bp AGGCTCCATCTGTCAGTTCCAGAAATTCAGTCACCTTaGAGAAAGCCTTCTGGCAGCAGAACTGGTGAATCA +
Preference number: 6 (lower is better)
Translates to: RLHLSVPEIQSP*RKPSGSRTGES
Trigger: TGATTCACCAGTTCTGCTGCCAGAAGGCTTTCTCCAAGGTGACTGAATTTCTGGAACTGACAGATGGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518764.1