RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCNI (Homo sapiens)

Ensembl gene IDs: ENSG00000118816

Ensembl transcript IDs: ENST00000237654.9, ENST00000504697.1, ENST00000505609.5, ENST00000506614.1, ENST00000507788.2, ENST00000511943.5, ENST00000513774.1, ENST00000515468.1, ENST00000515790.1

Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTAGACTAATTGGAACTTaGGTCATGGCTGTCACACTG +
Preference number: 2 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIRLIGT*VMAVTL
Trigger: CAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCT...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
3UTR-3UTR TCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAATTCTACAGCCTTTCCTaGTTTTGCATGTTCTCATTC +
Preference number: 2 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEFYSLS*FCMFSF
Trigger: GAATGAGAACATGCAAAATCAGGAAAGGCTGTAGAA...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
3UTR CAA 90 bp AATCAGCCTGTTAAGGTATATTTCCTTCTACAGCCTTTCCTGATTTaGCATGTTCTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCA +
Preference number: 2 (lower is better)
Translates to: NQPVKVYFLLQPFLI*HVLIPKVVYLSLHS
Trigger: TGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAGAACATGCAAAATCAGGAAAGGCTGTAGAAGGAAATATACCTTAACAGGCTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237654.9
3UTR GCA 72 bp TACCAGAGGCTTTTATCATCAGTACACAGTTCTGACTaGAATACCTTTTTCAGACTGCAAAGGGAGCTCAGG +
Preference number: 3 (lower is better)
Translates to: YQRLLSSVHSSD*NTFFRLQRELR
Trigger: CCTGAGCTCCCTTTGCAGTCTGAAAAAGGTATTGCAGTCAGAACTGTGTACTGATGATAAAAGCCTCTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTGCGAGACAGAGGCGCTaGCGCGTCCGCTCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIARQRR*RVRSRG
Trigger: TCCCCGCGAGCGGACGCGGCAGCGCCTCTGTCTCGC...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAGACCGGCTCTGCCCCTaGCCGGGGAAAGCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEDRLCP*PGKAPP
Trigger: CGGAGGCGCTTTCCCCGGGCAGGGGCAGAGCCGGTC...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTCGCTCGAGCCCGGGTTaGGAGGGGGCTCCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIRSSPG*EGAPSR
Trigger: GCGAGAGGGAGCCCCCTCCCAACCCGGGCTCGAGCG...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAAGGCTGCTGTACCTCTaGCTGGCACTTCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTERLLYL*LALLAC
Trigger: GCAAGCCAGAAGTGCCAGTCAGAGGTACAGCAGCCT...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAGACGACTCGGCCAACTaGGGAGGGAGAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEDDSAN*GGRKGK
Trigger: CTTCCCCTTTCTCCCTCCTCAGTTGGCCGAGTCGTC...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp TGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAATAATTCTCTCCATTCTGACGACTCGGCCAACTaGGGAGGGAGAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CGCVKIPIQLIQNNSLHSDDSAN*GGRKGK
Trigger: CTTCCCCTTTCTCCCTCCTCAGTTGGCCGAGTCGTC...AGAATGGAGAGAATTATTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR GCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTGCCTGCTACCCAGCTTaGTGTAGCTACCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIACYPA*CSYLLL
Trigger: GAGGAGAAGGTAGCTACAGCAAGCTGGGTAGCAGGC...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAGTCCTTGGAGAAGTCTaGGCCTGGGACAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEVLGEV*AWDRGG
Trigger: CCCTCCTCTGTCCCAGGCCCAGACTTCTCCAAGGAC...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAGCACCCACTGGCAGCTaGGAGATGATGGTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEAPTGS*EMMVKG
Trigger: GCCTTTTACCATCATCTCCCAGCTGCCAGTGGGTGC...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAATCTGCTTGCACCCACTaGCAGCTGGGAGATGATGGT +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTESACTH*QLGDDG
Trigger: ACCATCATCTCCCAGCTGCCAGTGGGTGCAAGCAGA...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAAGGCTGCTGTACCTCTaGCTGGCACTTCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVERLLYL*LALLAC
Trigger: GCAAGCCAGAAGTGCCAGTCAGAGGTACAGCAGCCT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR GCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAATCCTTTGGATCTGCCTaGTACCCAGCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTESFGSA*YPACCS
Trigger: GCTACAGCAAGCTGGGTAGCAGGCAGATCCAAAGGA...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAAACAGGCTGCAAAGGTaGACAAGGGGAAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTENRLQR*TRGSMS
Trigger: GGACATGCTTCCCCTTGTCCACCTTTGCAGCCTGTT...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAAGGACTGCCAAATGTTaGGATGGGCTCAATTTGGGC +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTERTAKC*DGLNLG
Trigger: GCCCAAATTGAGCCCATCTCAACATTTGGCAGTCCT...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp TGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAATAATTCTCTCCATTCTGCCTGCTACCCAGCTTaGTGTAGCTACCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: CGCVKIPIQLIQNNSLHSACYPA*CSYLLL
Trigger: GAGGAGAAGGTAGCTACAGCAAGCTGGGTAGCAGGC...AGAATGGAGAGAATTATTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR GCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAGATATCCTTTGGATCTaGCTGCTACCCAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEDILWI*LLPSLL
Trigger: CAGCAAGCTGGGTAGCAGGCAGATCCAAAGGATATC...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAACTGGCACTTCTGGCTTaGTGTTGTCCTTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTELALLA*CCPWRS
Trigger: ACTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAG...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAACAAGCTCCCGACAATaGATCAACTGGGAGCTATCC +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTETSSRQ*INWELS
Trigger: GGATAGCTCCCAGTTGATCCATTGTCGGGAGCTTGT...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAATGCTGTACCTCTGACTaGCACTTCTGGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTECCTSD*HFWLAV
Trigger: AACAGCAAGCCAGAAGTGCCAGTCAGAGGTACAGCA...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAGCACCCACTGGCAGCTaGGAGATGATGGTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEAPTGS*EMMVKG
Trigger: GCCTTTTACCATCATCTCCCAGCTGCCAGTGGGTGC...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAATCTGCTTGCACCCACTaGCAGCTGGGAGATGATGGT +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVESACTH*QLGDDG
Trigger: ACCATCATCTCCCAGCTGCCAGTGGGTGCAAGCAGA...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR TCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTGCCCTGGAAACTTCATaGTATCCTTTGGATCTGCCT +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIALETS*YPLDLP
Trigger: AGGCAGATCCAAAGGATATCATGAAGTTTCCAGGGC...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTTTGCAGGCCATACAGTaGAGTAGTTGCTTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLILQAIQ*SSCLVR
Trigger: CCTTACCAAGCAACTACTTCACTGTATGGCCTGCAA...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAACAAGCATGGATCCTCTaGATTGCAGAAGTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEQAWIL*IAEVGC
Trigger: GCAACCAACTTCTGCAATTCAGAGGATCCATGCTTG...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAATGCAGAGTAGAAAGGTaGTGTGCCACAAGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVECRVER*CATSSR
Trigger: TCGGGAGCTTGTGGCACATCACCTTTCTACTCTGCA...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR GCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTATGGATCCTCTGAATTaGAGAAGTTGGTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIMDPLN*RSWLQA
Trigger: GGCCTGCAACCAACTTCTGCAATTCAGAGGATCCAT...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTATGATGGTAAAAGGCTaGTGTACCTCTGACTGGCAC +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIMMVKG*CTSDWH
Trigger: GTGCCAGTCAGAGGTACAGCAGCCTTTTACCATCAT...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAACGTTTAGTAGAGGTCTaGTTGCACCCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVERLVEV*LHPLAA
Trigger: AGCTGCCAGTGGGTGCAAGCAGACCTCTACTAAACG...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTCTTCATGATATCCTTTaGATCTGCCTGCTACCCAGC +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLILHDIL*ICLLPS
Trigger: GCTGGGTAGCAGGCAGATCCAAAGGATATCATGAAG...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAAACAGGCTGCAAAGGTaGACAAGGGGAAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVENRLQR*TRGSMS
Trigger: GGACATGCTTCCCCTTGTCCACCTTTGCAGCCTGTT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR GCA 90 bp TGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAATAATTCTCTCCATTCTGATATCCTTTGGATCTaGCTGCTACCCAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CGCVKIPIQLIQNNSLHSDILWI*LLPSLL
Trigger: CAGCAAGCTGGGTAGCAGGCAGATCCAAAGGATATC...AGAATGGAGAGAATTATTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR GCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTCACTTTCCACATCTGTaGTTCCCTAGTGATTGCCTT +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIHFPHL*FPSDCL
Trigger: AAGGCAATCACTAGGGAAGCACAGATGTGGAAAGTG...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAATTGCTTGGTAAGGACTaGCAAATGTTGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTELLGKD*QMLRWA
Trigger: AGCCCATCTCAACATTTGGCAGTCCTTACCAAGCAA...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAACTGGCACTTCTGGCTTaGTGTTGTCCTTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVELALLA*CCPWRS
Trigger: ACTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAG...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CCA 90 bp GAAGAAAATCCAATGGTGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAACTTCATGATATCCTTTaGATCTGCCTGCTACCCAGC +
Preference number: 4 (lower is better)
Translates to: EENPMVWLCEDPNSTYPELHDIL*ICLLPS
Trigger: GCTGGGTAGCAGGCAGATCCAAAGGATATCATGAAG...TTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACACCATTGGATTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR CCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTAGGAAAGACAATCTCTaGTTTTCCAAAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIRKDNL*FSKGPG
Trigger: TCCAGGGCCTTTGGAAAACCAGAGATTGTCTTTCCT...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAACAAGCTCCCGACAATaGATCAACTGGGAGCTATCC +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVETSSRQ*INWELS
Trigger: GGATAGCTCCCAGTTGATCCATTGTCGGGAGCTTGT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAATCTGACTGGCACTTCTaGCTTGCTGTTGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVESDWHF*LAVVLG
Trigger: TCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCAGA...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAATGCTGTACCTCTGACTaGCACTTCTGGCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVECCTSD*HFWLAV
Trigger: AACAGCAAGCCAGAAGTGCCAGTCAGAGGTACAGCA...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR TCA 90 bp TGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAATAATTCTCTCCATTCTGCCCTGGAAACTTCATaGTATCCTTTGGATCTGCCT +
Preference number: 4 (lower is better)
Translates to: CGCVKIPIQLIQNNSLHSALETS*YPLDLP
Trigger: AGGCAGATCCAAAGGATATCATGAAGTTTCCAGGGC...AGAATGGAGAGAATTATTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR TCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAGATGGAGAAACATTCTaGTTTGAAGGCATTTTCCGC +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEDGETF*FEGIFR
Trigger: GCGGAAAATGCCTTCAAATCAGAATGTTTCTCCATC...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTAATGGTGTGGCTGTGTaGAGATCCCAATTCAACTTA +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLINGVAV*RSQFNL
Trigger: TAAGTTGAATTGGGATCTTCACACAGCCACACCATT...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTAAACTGAAAAGTAACTaGGGCCTAGTTGACACTGCA +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIKLKSN*GLVDTA
Trigger: TGCAGTGTCAACTAGGCCTCAGTTACTTTTCAGTTT...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTAAAGCCAATCAGGAATaGGTTTCTCCATTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIKANQE*VSPFPD
Trigger: GTCTGGAAATGGAGAAACTCATTCCTGATTGGCTTT...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAAGGAGGGATGTAATCTaGACACTCCTTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVERRDVI*TLLCHR
Trigger: CCTGTGACAAAGGAGTGTTCAGATTACATCCCTCCT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR TCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTCTTGTTGAAACTACATaGCAGAAACAGGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLILVETT*QKQAAK
Trigger: CTTTGCAGCCTGTTTCTGTCATGTAGTTTCAACAAG...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTTGCTTCCCTAGTGATTaGCTTTTCCAACAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLICFPSD*LFQQER
Trigger: TCTTTCCTGTTGGAAAAGGCAATCACTAGGGAAGCA...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAGGAGCTATCCATCTGTaGTTTCTGAAGCAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEGAIHL*FLKQFN
Trigger: ATTGAACTGCTTCAGAAAGCACAGATGGATAGCTCC...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAAGTAGAAAGGTGATGTaGCACAAGCTCCCGACAATG +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVESRKVM*HKLPTM
Trigger: CATTGTCGGGAGCTTGTGGCACATCACCTTTCTACT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR GCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAATGATGGTAAAAGGCTaGTGTACCTCTGACTGGCAC +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEMMVKG*CTSDWH
Trigger: GTGCCAGTCAGAGGTACAGCAGCCTTTTACCATCAT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR GCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAATGACAGAAACAGGCTaGAAAGGTGGACAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEMTETG*KGGQGE
Trigger: TTCCCCTTGTCCACCTTTGCAGCCTGTTTCTGTCAT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CCA 90 bp GAAGAAAATCCAATGGTGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAAAGGAAAGACAATCTCTaGTTTTCCAAAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: EENPMVWLCEDPNSTYPERKDNL*FSKGPG
Trigger: TCCAGGGCCTTTGGAAAACCAGAGATTGTCTTTCCT...TTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACACCATTGGATTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR CCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAGAAAATCCAATGGTGTaGCTGTGTGAAGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEENPMV*LCEDPN
Trigger: ATTGGGATCTTCACACAGCCACACCATTGGATTTTC...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAAGTTTGGCCAGCCATTaGATTACTTCATCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVESLASH*ITSSLW
Trigger: CCAGAGAGATGAAGTAATTCAATGGCTGGCCAAACT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAAGACTAATTGGAACTTaGGTCATGGCTGTCACACTG +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVERLIGT*VMAVTL
Trigger: CAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAATCAGTACACAGTTCTaGCTGCAATACCTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEISTQF*LQYLFQ
Trigger: CTGAAAAAGGTATTGCAGTCAGAACTGTGTACTGAT...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp CAATGGTGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAATAATTCTCTCTGCTTCCCTAGTGATTaGCTTTTCCAACAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QWCGCVKIPIQLIQNNSLCFPSD*LFQQER
Trigger: TCTTTCCTGTTGGAAAAGGCAATCACTAGGGAAGCA...GAGAGAATTATTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACACCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR GCA 90 bp GGAAAATATGAAGAAAATCCAATGGTGTGGCTGTGTGAAGATCCCAATTCAACTCACTTTCCACATCTGTaGTTCCCTAGTGATTGCCTT +
Preference number: 4 (lower is better)
Translates to: GKYEENPMVWLCEDPNSTHFPHL*FPSDCL
Trigger: AAGGCAATCACTAGGGAAGCACAGATGTGGAAAGTG...AGTTGAATTGGGATCTTCACACAGCCACACCATTGGATTTTCTTCATATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR CCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAACAACTCAAGTATTTTaGATGAGCCTTTACGGTAGC +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTETTQVF*MSLYGS
Trigger: GCTACCGTAAAGGCTCATCCAAAATACTTGAGTTGT...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp GAAGAAAATCCAATGGTGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAAGAAAATCCAATGGTGTaGCTGTGTGAAGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: EENPMVWLCEDPNSTYPEENPMV*LCEDPN
Trigger: ATTGGGATCTTCACACAGCCACACCATTGGATTTTC...TTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACACCATTGGATTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR CCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTATGAAGAAAATCCAATaGTGTGGCTGTGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIMKKIQ*CGCVKI
Trigger: GATCTTCACACAGCCACACCATTGGATTTTCTTCAT...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAATCTCAAAATTTCAGATaGGGAACATCCACAGAAACT +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTESQNFR*GTSTET
Trigger: AGTTTCTGTGGATGTTCCTCATCTGAAATTTTGAGA...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp TGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAATAATTCTCTCCATTCTAATGGTGTGGCTGTGTaGAGATCCCAATTCAACTTA +
Preference number: 4 (lower is better)
Translates to: CGCVKIPIQLIQNNSLHSNGVAV*RSQFNL
Trigger: TAAGTTGAATTGGGATCTTCACACAGCCACACCATT...AGAATGGAGAGAATTATTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAAATGGTGTGGCTGTGTaGAGATCCCAATTCAACTTA +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVENGVAV*RSQFNL
Trigger: TAAGTTGAATTGGGATCTTCACACAGCCACACCATT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR TCA 90 bp GGAAAATATGAAGAAAATCCAATGGTGTGGCTGTGTGAAGATCCCAATTCAACTAAACTGAAAAGTAACTaGGGCCTAGTTGACACTGCA +
Preference number: 4 (lower is better)
Translates to: GKYEENPMVWLCEDPNSTKLKSN*GLVDTA
Trigger: TGCAGTGTCAACTAGGCCTCAGTTACTTTTCAGTTT...AGTTGAATTGGGATCTTCACACAGCCACACCATTGGATTTTCTTCATATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR TCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAACATTATAGAGCCGTTTaGTTCCATCATAGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEHYRAV*FHHRSH
Trigger: ATGACTTCTATGATGGAATCAAACGGCTCTATAATG...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAACTTGTTGAAACTACATaGCAGAAACAGGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVELVETT*QKQAAK
Trigger: CTTTGCAGCCTGTTTCTGTCATGTAGTTTCAACAAG...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR TCA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAATTCTTTTGCCATCTCTaGTTAATATGGGACAATTCC +
Preference number: 4 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEFFCHL*LIWDNS
Trigger: GGAATTGTCCCATATTAATCAGAGATGGCAAAAGAA...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CAATGGTGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAATAATTCTCTCACTGGAATTCTGATTTaGAGGCATTTTCCGCACATT +
Preference number: 4 (lower is better)
Translates to: QWCGCVKIPIQLIQNNSLTGILI*RHFPHI
Trigger: AATGTGCGGAAAATGCCTTCAAATCAGAATTCCAGT...GAGAGAATTATTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACACCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR CCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTCAGAGCAAATGTTTCTaGGTAAAGGTTGAATTGGTA +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIQSKCF*VKVELV
Trigger: TACCAATTCAACCTTTACCCAGAAACATTTGCTCTG...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAGAAAATCCAATGGTGTaGCTGTGTGAAGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEENPMV*LCEDPN
Trigger: ATTGGGATCTTCACACAGCCACACCATTGGATTTTC...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAATGCCAAATGTTGAGATaGGCTCAATTTGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVECQMLR*AQFGQT
Trigger: AGTTTGCCCAAATTGAGCCCATCTCAACATTTGGCA...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp GAAGAAAATCCAATGGTGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAATCTCAAAATTTCAGATaGGGAACATCCACAGAAACT +
Preference number: 4 (lower is better)
Translates to: EENPMVWLCEDPNSTYPESQNFR*GTSTET
Trigger: AGTTTCTGTGGATGTTCCTCATCTGAAATTTTGAGA...TTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACACCATTGGATTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAATCCATCTGTGCTTTCTaGAGCAGTTCAATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVESICAF*SSSIVR
Trigger: TCTTACAATTGAACTGCTTCAGAAAGCACAGATGGA...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAATTCTACAGCCTTTCCTaGTTTTGCATGTTCTCATTC +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEFYSLS*FCMFSF
Trigger: GAATGAGAACATGCAAAATCAGGAAAGGCTGTAGAA...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR TCA 90 bp GGAAAATATGAAGAAAATCCAATGGTGTGGCTGTGTGAAGATCCCAATTCAACTTTAGTACTGGAATTCTaGTTTGAAGGCATTTTCCGC +
Preference number: 4 (lower is better)
Translates to: GKYEENPMVWLCEDPNSTLVLEF*FEGIFR
Trigger: GCGGAAAATGCCTTCAAATCAGAATTCCAGTACTAA...AGTTGAATTGGGATCTTCACACAGCCACACCATTGGATTTTCTTCATATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR GCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAGTACACAGTTCTGACTaGAATACCTTTTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEVHSSD*NTFFRL
Trigger: CAGTCTGAAAAAGGTATTGCAGTCAGAACTGTGTAC...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR GCA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTAGGACAACTTTTTATTaGTACCAGAGGCTTTTATCA +
Preference number: 4 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIRTTFY*YQRLLS
Trigger: TGATAAAAGCCTCTGGTAGCAATAAAAAGTTGTCCT...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CCA 90 bp TGTGGCTGTGTGAAGATCCCAATTCAACTTATCCAGAATAATTCTCTCCATTCTATGAAGAAAATCCAATaGTGTGGCTGTGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: CGCVKIPIQLIQNNSLHSMKKIQ*CGCVKI
Trigger: GATCTTCACACAGCCACACCATTGGATTTTCTTCAT...AGAATGGAGAGAATTATTCTGGATAAGTTGAATTGGGATCTTCACACAGCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511943.5
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAATGAAGAAAATCCAATaGTGTGGCTGTGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEMKKIQ*CGCVKI
Trigger: GATCTTCACACAGCCACACCATTGGATTTTCTTCAT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAACCTTTTCAGACTAATTaGAACTTGAGTCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEPFQTN*NLSHGC
Trigger: ACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGG...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAACATTATAGAGCCGTTTaGTTCCATCATAGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEHYRAV*FHHRSH
Trigger: ATGACTTCTATGATGGAATCAAACGGCTCTATAATG...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR TCA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAGAGCTATCCATAATATaGAGAAAATCCAATGGTGTG +
Preference number: 4 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEELSII*RKSNGV
Trigger: CACACCATTGGATTTTCTTCATATTATGGATAGCTC...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515468.1
CDS TCA 90 bp ACCCACTGGCAGCTGGGAGATGATGGTAAAAGGCTGCTGTACCTCTaGCTGGCACTTCTGGCTTGCTGTTGTCCTTGGAGAAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: THWQLGDDGKRLLYL*LALLACCCPWRSLG
Trigger: GCCCAGACTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCAGAGGTACAGCAGCCTTTTACCATCATCTCCCAGCTGCCAGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS TCA 90 bp TTCTCGTGGCTAAGAAAAGCCGAAGGTCCGTGGACTCATTTTCCTTaGAGGAGCGGAAGGGTTGCTTGCAGACCGCACGGTGACGTCAGC +
Preference number: 5 (lower is better)
Translates to: FSWLRKAEGPWTHFP*RSGRVACRPHGDVS
Trigger: GCTGACGTCACCGTGCGGTCTGCAAGCAACCCTTCCGCTCCTTCAAGGAAAATGAGTCCACGGACCTTCGGCTTTTCTTAGCCACGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507788.2
CDS CCA 90 bp ACTGGCAGCTGGGAGATGATGGTAAAAGGCTGCTGTACCTCTGACTaGCACTTCTGGCTTGCTGTTGTCCTTGGAGAAGTCTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TGSWEMMVKGCCTSD*HFWLAVVLGEVWAW
Trigger: CCAGGCCCAGACTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCAGAGGTACAGCAGCCTTTTACCATCATCTCCCAGCTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS GCA 90 bp CCTGGAAACTTCATGATATCCTTTGGATCTGCCTGCTACCCAGCTTaGTGTAGCTACCTTCTCCTCCTCTTCCTCCTCCTCCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: PGNFMISFGSACYPA*CSYLLLLFLLLLLP
Trigger: GGGGAGGAGGAGGAGGAGGAAGAGGAGGAGAAGGTAGCTACAGCAAGCTGGGTAGCAGGCAGATCCAAAGGATATCATGAAGTTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237654.9
ENST00000511943.5
ENST00000515790.1
CDS CCA 90 bp TGGGAGATGATGGTAAAAGGCTGCTGTACCTCTGACTGGCACTTCTaGCTTGCTGTTGTCCTTGGAGAAGTCTGGGCCTGGGACAGAGGA +
Preference number: 5 (lower is better)
Translates to: WEMMVKGCCTSDWHF*LAVVLGEVWAWDRG
Trigger: TCCTCTGTCCCAGGCCCAGACTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCAGAGGTACAGCAGCCTTTTACCATCATCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CAA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAACCGCTCGAGCCCGGGTaGGGAGGGGGCTCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEPLEPG*GGGSLS
Trigger: CGAGAGGGAGCCCCCTCCCAACCCGGGCTCGAGCGG...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS CCA 90 bp GTACTTGAGTTTGGCCAGCCATTGAATTACTTCATCTCTCTGGGATaGAGAAACATTCTTCTCCTCCTCTTCCTCCTCCTCCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: VLEFGQPLNYFISLG*RNILLLLFLLLLLP
Trigger: GGGGAGGAGGAGGAGGAGGAAGAGGAGGAGAAGAATGTTTCTCCATCCCAGAGAGATGAAGTAATTCAATGGCTGGCCAAACTCAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507788.2
CDS-3UTR CAA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAGGCTTGCTGTTGTCCTaGGAGAAGTCTGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEGLLLS*EKSGPG
Trigger: CCCAGGCCCAGACTTCTCCAAGGACAACAGCAAGCC...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CAA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAACTTCTGGCTTGCTGTaGTCCTTGGAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTETSGLL*SLEKSG
Trigger: CCCAGACTTCTCCAAGGACAACAGCAAGCCAGAAGT...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CAA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAATTAGTAGAGGTCTGCTaGCACCCACTGGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LIPKVVYLSLHSKVALVELVEVC*HPLAAG
Trigger: CCCAGCTGCCAGTGGGTGCAAGCAGACCTCTACTAA...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS TCA 90 bp GTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAACTACATaGCAGAAACAGGCTGCAAAGGTGGACAAGGGGAAGCATGTCCCT +
Preference number: 5 (lower is better)
Translates to: VYLSLHSKVALVETT*QKQAAKVDKGKHVP
Trigger: AGGGACATGCTTCCCCTTGTCCACCTTTGCAGCCTGTTTCTGTCATGTAGTTTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CAA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTAAGGACTGCCAAATGTaGAGATGGGCTCAATTTGGG +
Preference number: 5 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIKDCQM*RWAQFG
Trigger: CCCAAATTGAGCCCATCTCAACATTTGGCAGTCCTT...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CAA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAATCTGAATTGCAGAAGTaGGTTGCAGGCCATACAGTG +
Preference number: 5 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTESELQK*VAGHTV
Trigger: CACTGTATGGCCTGCAACCAACTTCTGCAATTCAGA...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CAA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAACTTCTGGCTTGCTGTaGTCCTTGGAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LIPKVVYLSLHSKVALVETSGLL*SLEKSG
Trigger: CCCAGACTTCTCCAAGGACAACAGCAAGCCAGAAGT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CAA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAACTGGCACTTCTGGCTaGCTGTTGTCCTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LIPKVVYLSLHSKVALVETGTSG*LLSLEK
Trigger: CTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CAA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTTGGGTAAAGGTTGAATaGGTACTTGAGTTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIWVKVE*VLEFGQ
Trigger: CTGGCCAAACTCAAGTACCAATTCAACCTTTACCCA...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CAA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAACATGGATCCTCTGAATaGCAGAAGTTGGTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEHGSSE*QKLVAG
Trigger: GCCTGCAACCAACTTCTGCAATTCAGAGGATCCATG...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CAA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAAATCTGAACACTCCTTaGTCACAGGTCACCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LIPKVVYLSLHSKVALVENLNTP*SQVTRV
Trigger: CACCCTGGTGACCTGTGACAAAGGAGTGTTCAGATT...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CAA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTTCCATTTCCTCTACTTaGCGTTTAGTAGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLISISST*RLVEVC
Trigger: GCAGACCTCTACTAAACGCAAAGTAGAGGAAATGGA...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CAA 90 bp ACAGACTTAAATCATAGAGCTGCCCCAACATCTAGACAGTCTCTCCTACTGATTCAGACTAATTGGAACTaGAGTCATGGCTGTCACACT +
Preference number: 5 (lower is better)
Translates to: TDLNHRAAPTSRQSLLLIQTNWN*SHGCHT
Trigger: AGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTG...AATCAGTAGGAGAGACTGTCTAGATGTTGGGGCAGCTCTATGATTTAAGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS GCA 90 bp AAGGTGGACAAGGGGAAGCATGTCCCTCTTGTCTTGATAAATCAGTaGCACACACAGAACCCACATTTTCTGAGACATTATCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: KVDKGKHVPLVLINQ*HTQNPHFLRHYLHY
Trigger: ATAATGAAGATAATGTCTCAGAAAATGTGGGTTCTGTGTGTGGCACTGATTTATCAAGACAAGAGGGACATGCTTCCCCTTGTCCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CAA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAGAGTTTGGCCAGCCATaGAATTACTTCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEEFGQP*NYFISL
Trigger: CAGAGAGATGAAGTAATTCAATGGCTGGCCAAACTC...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS-3UTR CAA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAATCCATTTCCTCTACTTaGCGTTTAGTAGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: LIPKVVYLSLHSKVALVESISST*RLVEVC
Trigger: GCAGACCTCTACTAAACGCAAAGTAGAGGAAATGGA...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CAA 90 bp CCAAAGTACCCTTTTCAGACTAATTGGAACTTGAGTCATGGCTGTCACACTGAAAAGGACAACTTTTTATaGCTACCAGAGGCTTTTATC +
Preference number: 5 (lower is better)
Translates to: PKYPFQTNWNLSHGCHTEKDNFL*LPEAFI
Trigger: GATAAAAGCCTCTGGTAGCAATAAAAAGTTGTCCTT...TTCAGTGTGACAGCCATGACTCAAGTTCCAATTAGTCTGAAAAGGGTACTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS TCA 90 bp CAGAACCCACATTTTCTGAGACATTATCTTCATTATAGAGCCGTTTaGTTCCATCATAGAAGTCATCCACTTCCATTTCCTCTACTTTGC +
Preference number: 5 (lower is better)
Translates to: QNPHFLRHYLHYRAV*FHHRSHPLPFPLLC
Trigger: GCAAAGTAGAGGAAATGGAAGTGGATGACTTCTATGATGGAATCAAACGGCTCTATAATGAAGATAATGTCTCAGAAAATGTGGGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS-3UTR CAA 90 bp CTCATTCCCAAAGTAGTCTACCTTAGTTTACACTCAAAGGTAGCACTTGTTGAAGAGAAACATTCTGATTaGAAGGCATTTTCCGCACAT +
Preference number: 5 (lower is better)
Translates to: LIPKVVYLSLHSKVALVEEKHSD*KAFSAH
Trigger: ATGTGCGGAAAATGCCTTCAAATCAGAATGTTTCTC...TTCAACAAGTGCTACCTTTGAGTGTAAACTAAGGTAGACTACTTTGGGAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237654.9
CDS CCA 72 bp CGCTGGCGCTCGAGCGGGACGCACGGCTGCGGCCGCTaGGTCGGTCAGCGAATTAGTTCCATGATGACCCCC +
Preference number: 6 (lower is better)
Translates to: RWRSSGTHGCGR*VGQRISSMMTP
Trigger: GGGGGTCATCATGGAACTAATTCGCTGACCGACCCAGCGGCCGCAGCCGTGCGTCCCGCTCGAGCGCCAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000507788.2
CDS GCA 72 bp GGGAGGGAGGGGAAGAGAGGGGAAGGGAGGAAGAAGTaGCGGCTTCCTCGGCTCCGCCCTCGCGGACCGATT +
Preference number: 6 (lower is better)
Translates to: GREGKRGEGRKK*RLPRLRPRGPI
Trigger: AATCGGTCCGCGAGGGCGGAGCCGAGGAAGCCGGCACTTCTTCCTCCCTTCCCCTCTCTTCCCCTCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507788.2
CDS CCA 72 bp AGTGCCGTTTTCAAGTGGGCAGGTGACGGGTCTGTCTaGGCCGGAGAGGACGAAGAGGGCGGCCCCGAGGTT +
Preference number: 6 (lower is better)
Translates to: SAVFKWAGDGSV*AGEDEEGGPEV
Trigger: AACCTCGGGGCCGCCCTCTTCGTCCTCTCCGGCCCAGACAGACCCGTCACCTGCCCACTTGAAAACGGCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513774.1
CDS GCA 72 bp CCGCCGCCTTCCCGGTCCAACGAAAGTACAGAGAAGTaGGGCCGAAAGGAGACGGGCTGGGGAAGTCGTTGG +
Preference number: 6 (lower is better)
Translates to: PPPSRSNESTEK*GRKETGWGSRW
Trigger: CCAACGACTTCCCCAGCCCGTCTCCTTTCGGCCGCACTTCTCTGTACTTTCGTTGGACCGGGAAGGCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507788.2
CDS CCA 72 bp TGGCCCGAAAAGGAACACAGTAGTGCCGTTTTCAAGTaGGCAGGTGACGGGTCTGTCTGGGCCGGAGAGGAC +
Preference number: 6 (lower is better)
Translates to: WPEKEHSSAVFK*AGDGSVWAGED
Trigger: GTCCTCTCCGGCCCAGACAGACCCGTCACCTGCCCACTTGAAAACGGCACTACTGTGTTCCTTTTCGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513774.1
CDS CAA 90 bp AAGTACAGAGAAGTGCGGCCGAAAGGAGACGGGCTGGGGAAGTCGTaGGCACTAGGATGGAAGGAGGGAGGACGTTTTCTCGTGGCTAAG +
Preference number: 6 (lower is better)
Translates to: KYREVRPKGDGLGKS*ALGWKEGGRFLVAK
Trigger: CTTAGCCACGAGAAAACGTCCTCCCTCCTTCCATCCTAGTGCCAACGACTTCCCCAGCCCGTCTCCTTTCGGCCGCACTTCTCTGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507788.2
CDS CAA 72 bp CCTGGGACAGAGGAGGGATGTAATCTGAACACTCCTTaGTCACAGGTCACCAGGGTGTGCTTGAGGGGACGG +
Preference number: 6 (lower is better)
Translates to: PGTEEGCNLNTP*SQVTRVCLRGR
Trigger: CCGTCCCCTCAAGCACACCCTGGTGACCTGTGACAAAGGAGTGTTCAGATTACATCCCTCCTCTGTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS GCA 72 bp GGCCCTGGAAACTTCATGATATCCTTTGGATCTGCCTaGTACCCAGCTTGCTGTAGCTACCTGAGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: GPGNFMISFGSA*YPACCSYLRVG
Trigger: CCCCACCCTCAGGTAGCTACAGCAAGCTGGGTAGCAGGCAGATCCAAAGGATATCATGAAGTTTCCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513774.1
CDS CAA 72 bp GCTAAGAAAAGCCGAAGGTCCGTGGACTCATTTTCCTaGAAGGAGCGGAAGGGTTGCTTGCAGACCGCACGG +
Preference number: 6 (lower is better)
Translates to: AKKSRRSVDSFS*KERKGCLQTAR
Trigger: CCGTGCGGTCTGCAAGCAACCCTTCCGCTCCTTCAAGGAAAATGAGTCCACGGACCTTCGGCTTTTCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507788.2
CDS TCA 72 bp CTAAGAAAAGCCGAAGGTCCGTGGACTCATTTTCCTTaGAGGAGCGGAAGGGTTGCTTGCAGACCGCACGGT +
Preference number: 6 (lower is better)
Translates to: LRKAEGPWTHFP*RSGRVACRPHG
Trigger: ACCGTGCGGTCTGCAAGCAACCCTTCCGCTCCTTCAAGGAAAATGAGTCCACGGACCTTCGGCTTTTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507788.2
CDS CCA 72 bp ATGGTAAAAGGCTGCTGTACCTCTGACTGGCACTTCTaGCTTGCTGTTGTCCTTGGAGAAGTCTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: MVKGCCTSDWHF*LAVVLGEVWAW
Trigger: CCAGGCCCAGACTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCAGAGGTACAGCAGCCTTTTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS CCA 72 bp AAAGGAGACGGGCTGGGGAAGTCGTTGGCACTAGGATaGAAGGAGGGAGGACGTTTTCTCGTGGCTAAGAAA +
Preference number: 6 (lower is better)
Translates to: KGDGLGKSLALG*KEGGRFLVAKK
Trigger: TTTCTTAGCCACGAGAAAACGTCCTCCCTCCTTCCATCCTAGTGCCAACGACTTCCCCAGCCCGTCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507788.2
CDS GCA 72 bp GGCCCTGGAAACTTCATGATATCCTTTGGATCTGCCTaGTACCCAGCTTGCTGTAGCTACCTTCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GPGNFMISFGSA*YPACCSYLLLL
Trigger: GAGGAGGAGAAGGTAGCTACAGCAAGCTGGGTAGCAGGCAGATCCAAAGGATATCATGAAGTTTCCAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237654.9
ENST00000511943.5
ENST00000515790.1
CDS GCA 72 bp GGCCCTGGAAACTTCATGATATCCTTTGGATCTGCCTaGTACCCAGCTTGCTGTAGCTACCTCCCGAAACAC +
Preference number: 6 (lower is better)
Translates to: GPGNFMISFGSA*YPACCSYLPKH
Trigger: GTGTTTCGGGAGGTAGCTACAGCAAGCTGGGTAGCAGGCAGATCCAAAGGATATCATGAAGTTTCCAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505609.5
CDS CCA 72 bp TTTGGCCAGCCATTGAATTACTTCATCTCTCTGGGATaGAGAAACATTCCTGTCGTTCAGGCTGGAGTGCAG +
Preference number: 6 (lower is better)
Translates to: FGQPLNYFISLG*RNIPVVQAGVQ
Trigger: CTGCACTCCAGCCTGAACGACAGGAATGTTTCTCCATCCCAGAGAGATGAAGTAATTCAATGGCTGGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504697.1
CDS CAA 90 bp AAACAGGCTGCAAAGGTGGACAAGGGGAAGCATGTCCCTCTTGTCTaGATAAATCAGTGCCACACACAGAACCCACATTTTCTGAGACAT +
Preference number: 6 (lower is better)
Translates to: KQAAKVDKGKHVPLV*INQCHTQNPHFLRH
Trigger: ATGTCTCAGAAAATGTGGGTTCTGTGTGTGGCACTGATTTATCAAGACAAGAGGGACATGCTTCCCCTTGTCCACCTTTGCAGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS TCA 72 bp ACAATCTCTGGTTTTCCAAAGGCCCTGGAAACTTCATaGTATCCTTTGGATCTGCCTGCTACCCAGCTTGCT +
Preference number: 6 (lower is better)
Translates to: TISGFPKALETS*YPLDLPATQLA
Trigger: AGCAAGCTGGGTAGCAGGCAGATCCAAAGGATATCATGAAGTTTCCAGGGCCTTTGGAAAACCAGAGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000237654.9
ENST00000505609.5
ENST00000511943.5
ENST00000513774.1
ENST00000515790.1
CDS CAA 72 bp GCAAAGGTGGACAAGGGGAAGCATGTCCCTCTTGTCTaGATAAATCAGTGCCACACACAGAACCCACATTTT +
Preference number: 6 (lower is better)
Translates to: AKVDKGKHVPLV*INQCHTQNPHF
Trigger: AAAATGTGGGTTCTGTGTGTGGCACTGATTTATCAAGACAAGAGGGACATGCTTCCCCTTGTCCACCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS TCA 72 bp AGTTTACACTCAAAGGTAGCACTTGTTGAAACTACATaGCAGAAACAGGCTGCAAAGGTGGACAAGGGGAAG +
Preference number: 6 (lower is better)
Translates to: SLHSKVALVETT*QKQAAKVDKGK
Trigger: CTTCCCCTTGTCCACCTTTGCAGCCTGTTTCTGTCATGTAGTTTCAACAAGTGCTACCTTTGAGTGTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS CCA 72 bp CCTATCCAAAAGACTGCTAGCCAGAGCAAATGTTTCTaGGTAAAGGTTGAATTGGTACTTGAGTTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: PIQKTASQSKCF*VKVELVLEFGQ
Trigger: CTGGCCAAACTCAAGTACCAATTCAACCTTTACCCAGAAACATTTGCTCTGGCTAGCAGTCTTTTGGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237654.9
ENST00000504697.1
ENST00000505609.5
ENST00000513774.1
CDS GCA 72 bp AAGGGGAAGCATGTCCCTCTTGTCTTGATAAATCAGTaGCACACACAGAACCCACATTTTCTGAGACATTAT +
Preference number: 6 (lower is better)
Translates to: KGKHVPLVLINQ*HTQNPHFLRHY
Trigger: ATAATGTCTCAGAAAATGTGGGTTCTGTGTGTGGCACTGATTTATCAAGACAAGAGGGACATGCTTCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1
CDS CAA 90 bp CAAAAGACTGCTAGCCAGAGCAAATGTTTCTGGGTAAAGGTTGAATaGGTACTTGAGTTTGGCCAGCCATTGAATTACTTCATCTCTCTG +
Preference number: 6 (lower is better)
Translates to: QKTASQSKCFWVKVE*VLEFGQPLNYFISL
Trigger: CAGAGAGATGAAGTAATTCAATGGCTGGCCAAACTCAAGTACCAATTCAACCTTTACCCAGAAACATTTGCTCTGGCTAGCAGTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237654.9
ENST00000504697.1
ENST00000505609.5
ENST00000513774.1
CDS CAA 90 bp CCATTCTCAAAATTTCAGATGAGGAACATCCACAGAAACTGTCTCTaGCCAATACCTTTAGTACTGGAATTCTCTCATCTTCCTCAACAG +
Preference number: 6 (lower is better)
Translates to: PFSKFQMRNIHRNCL*PIPLVLEFSHLPQQ
Trigger: CTGTTGAGGAAGATGAGAGAATTCCAGTACTAAAGGTATTGGCAAGAGACAGTTTCTGTGGATGTTCCTCATCTGAAATTTTGAGAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000506614.1
CDS CCA 72 bp CAACTGGGAGCTATCCATAATATGAAGAAAATCCAATaGTGTGGCTGTGTGAAGATCCCAATTCAACTTATC +
Preference number: 6 (lower is better)
Translates to: QLGAIHNMKKIQ*CGCVKIPIQLI
Trigger: GATAAGTTGAATTGGGATCTTCACACAGCCACACCATTGGATTTTCTTCATATTATGGATAGCTCCCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515468.1
CDS CAA 72 bp GTAAAGGTTGAATTGGTACTTGAGTTTGGCCAGCCATaGAATTACTTCATCTCTCTGGGATGGAGAAACATT +
Preference number: 6 (lower is better)
Translates to: VKVELVLEFGQP*NYFISLGWRNI
Trigger: AATGTTTCTCCATCCCAGAGAGATGAAGTAATTCAATGGCTGGCCAAACTCAAGTACCAATTCAACCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237654.9
ENST00000504697.1
ENST00000505609.5
ENST00000507788.2
ENST00000513774.1
CDS TCA 72 bp CATTTTCTGAGACATTATCTTCATTATAGAGCCGTTTaGTTCCATCATAGAAGTCATCCACTTCCATTTCCT +
Preference number: 6 (lower is better)
Translates to: HFLRHYLHYRAV*FHHRSHPLPFP
Trigger: AGGAAATGGAAGTGGATGACTTCTATGATGGAATCAAACGGCTCTATAATGAAGATAATGTCTCAGAAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237654.9
ENST00000515468.1