RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCNF (Homo sapiens)

Ensembl gene IDs: ENSG00000162063

Ensembl transcript IDs: ENST00000293968.11, ENST00000397066.9, ENST00000564236.1, ENST00000564333.1, ENST00000569093.1

Found 562 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGGCTCCCGGCTGGTGCGGACCAGGGGTTTGGGTCCAGGGGTTaGAGGGATCTGGGTGTCCAGCGCCAGTGCCTGTGGGTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: PWLPAGADQGFGSRG*RDLGVQRQCLWVLG
Trigger: CCCCAGGACCCACAGGCACTGGCGCTGGACACCCAGATCCCTGCAACCCCTGGACCCAAACCCCTGGTCCGCACCAGCCGGGAGCCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 90 bp CTGCTGGCTCCCAGGCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTaGCCAGCAGGAAAGCCCAGGGGTCTGCCTCCCTCCCACGGGCCC +
Preference number: 1 (lower is better)
Translates to: LLAPRLPFHAGAESP*PAGKPRGLPPSHGP
Trigger: GGGCCCGTGGGAGGGAGGCAGACCCCTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGCCTGGGAGCCAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 90 bp GTCCACGGAGCTTGTGGGACTTGCGGTGCTGACGGAGGAGTACCCTaGGGTCGTGACGTCCTTCCCTGGCTCCCGGCTGGTGCGGACCAG +
Preference number: 1 (lower is better)
Translates to: VHGACGTCGADGGVP*GRDVLPWLPAGADQ
Trigger: CTGGTCCGCACCAGCCGGGAGCCAGGGAAGGACGTCACGACCTCAGGGTACTCCTCCGTCAGCACCGCAAGTCCCACAAGCTCCGTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 90 bp ATGGTGGCAGGGCTGTGTGTGCGAGTCACTGTCCAGGGACAGCACTaGGGTAGGTTGGGGCAGGGCCCCCAAGCCACCGTCCACGGAGCT +
Preference number: 1 (lower is better)
Translates to: MVAGLCVRVTVQGQH*GRLGQGPQATVHGA
Trigger: AGCTCCGTGGACGGTGGCTTGGGGGCCCTGCCCCAACCTACCTCAGTGCTGTCCCTGGACAGTGACTCGCACACACAGCCCTGCCACCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 90 bp CTGATAAACCGGGTGCAGATGACCATGCAGGCGATGCCCAGCAGCTaGAGCCTGTACCGCGGCACCAGCCTCCTCCGCAGGTACCGGTCC +
Preference number: 1 (lower is better)
Translates to: LINRVQMTMQAMPSS*SLYRGTSLLRRYRS
Trigger: GGACCGGTACCTGCGGAGGAGGCTGGTGCCGCGGTACAGGCTCCAGCTGCTGGGCATCGCCTGCATGGTCATCTGCACCCGGTTTATCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 90 bp GGCTGTGTGTGCGAGTCACTGTCCAGGGACAGCACTGAGGTAGGTTaGGGCAGGGCCCCCAAGCCACCGTCCACGGAGCTTGTGGGACTT +
Preference number: 1 (lower is better)
Translates to: GCVCESLSRDSTEVG*GRAPKPPSTELVGL
Trigger: AAGTCCCACAAGCTCCGTGGACGGTGGCTTGGGGGCCCTGCCCCAACCTACCTCAGTGCTGTCCCTGGACAGTGACTCGCACACACAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 90 bp AGGCTGGTGTGCAGCAGGGAGAGCTCGCAGAGGAAGCTGCACAGGTaGTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCC +
Preference number: 1 (lower is better)
Translates to: RLVCSRESSQRKLHR*WVLSSTGTSVSRTS
Trigger: GGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGCACCTGTGCAGCTTCCTCTGCGAGCTCTCCCTGCTGCACACCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
3UTR CCA 90 bp GGGGTTGCAGGGATCTGGGTGTCCAGCGCCAGTGCCTGTGGGTCCTaGGGTCCCTTGTCCTCTGGACAAGCCTCCTCATCACTGGATTCC +
Preference number: 1 (lower is better)
Translates to: GVAGIWVSSASACGS*GPLSSGQASSSLDS
Trigger: GGAATCCAGTGATGAGGAGGCTTGTCCAGAGGACAAGGGACCCCAGGACCCACAGGCACTGGCGCTGGACACCCAGATCCCTGCAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 90 bp CGCCTCTGGGACAGAGCTCTAAAACGAGTCACGTGTCGTAGGGAGTaGGCCTGTGGCCAAGGCAGTCCTCGCAGTGTGCAGGGACGCAGG +
Preference number: 1 (lower is better)
Translates to: RLWDRALKRVTCRRE*ACGQGSPRSVQGRR
Trigger: CCTGCGTCCCTGCACACTGCGAGGACTGCCTTGGCCACAGGCCCACTCCCTACGACACGTGACTCGTTTTAGAGCTCTGTCCCAGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 90 bp CTGGTGTGCAGCAGGGAGAGCTCGCAGAGGAAGCTGCACAGGTGCTaGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTG +
Preference number: 1 (lower is better)
Translates to: LVCSRESSQRKLHRC*VLSSTGTSVSRTSL
Trigger: CAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGCACCTGTGCAGCTTCCTCTGCGAGCTCTCCCTGCTGCACACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
3UTR CCA 90 bp TCCCGGCACGGGGCTCTGGTGGGGCTGGGAACACCAGGACACACATaGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGA +
Preference number: 1 (lower is better)
Translates to: SRHGALVGLGTPGHT*AEASRDSETRKGQR
Trigger: TCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 90 bp TCCGGGGGACTTGGGGGACGACACTGTAAACATGACTTCCTGGCCTaGTGGTGGCAGGGCTGTGTGTGCGAGTCACTGTCCAGGGACAGC +
Preference number: 1 (lower is better)
Translates to: SGGLGGRHCKHDFLA*WWQGCVCESLSRDS
Trigger: GCTGTCCCTGGACAGTGACTCGCACACACAGCCCTGCCACCATCAGGCCAGGAAGTCATGTTTACAGTGTCGTCCCCCAAGTCCCCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 90 bp TCCGCTCACCGACCACGGAGGGCGGATGAAGAGCCAGATGAAAGGTaGGGCACCCACATTCAGCCGCTCAGCGAGACTGAAGAAGCGAGA +
Preference number: 1 (lower is better)
Translates to: SAHRPRRADEEPDER*GTHIQPLSETEEAR
Trigger: TCTCGCTTCTTCAGTCTCGCTGAGCGGCTGAATGTGGGTGCCGCACCTTTCATCTGGCTCTTCATCCGCCCTCCGTGGTCGGTGAGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 90 bp ACCAGCCTCCTCCGCAGGTACCGGTCCACACACTCCACGGTCAGGTaGAGGCACAGGCTTGTGAAGTCCTTCATGGTGGCAACTTCCACC +
Preference number: 1 (lower is better)
Translates to: TSLLRRYRSTHSTVR*RHRLVKSFMVATST
Trigger: GGTGGAAGTTGCCACCATGAAGGACTTCACAAGCCTGTGCCTGCACCTGACCGTGGAGTGTGTGGACCGGTACCTGCGGAGGAGGCTGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 90 bp ATGTGGGCAGGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGTaGCTTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGT +
Preference number: 1 (lower is better)
Translates to: MWAGAQVVSDYPGHT*LKRESCQLPARGSG
Trigger: ACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAAGGCACGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTGCCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 90 bp TGCTCTCCGGGGGACTTGGGGGACGACACTGTAAACATGACTTCCTaGCCTGATGGTGGCAGGGCTGTGTGTGCGAGTCACTGTCCAGGG +
Preference number: 1 (lower is better)
Translates to: CSPGDLGDDTVNMTS*PDGGRAVCASHCPG
Trigger: CCCTGGACAGTGACTCGCACACACAGCCCTGCCACCATCAGGCCAGGAAGTCATGTTTACAGTGTCGTCCCCCAAGTCCCCCGGAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 90 bp GCAATATGGATGCTTTGTGAGTCCTCTGCAGCTGGCACTCTGCCCTaGGGCTCTCGTGAACCACGGCCTTGCAGCAGCTTCCGCTCACCG +
Preference number: 1 (lower is better)
Translates to: AIWMLCESSAAGTLP*GSREPRPCSSFRSP
Trigger: CGGTGAGCGGAAGCTGCTGCAAGGCCGTGGTTCACGAGAGCCTCAGGGCAGAGTGCCAGCTGCAGAGGACTCACAAAGCATCCATATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 90 bp GCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATaGAGCGTTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCC +
Preference number: 1 (lower is better)
Translates to: ASHPLCSLRKGLHGL*SVPMLCSHPSPPAP
Trigger: GGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 90 bp GGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCATaGTCTATGCAGCGTTCCTATGCTATGCTCCCACCCTTCGCCTCC +
Preference number: 1 (lower is better)
Translates to: GGRKSSSLLSAQRPP*SMQRSYAMLPPFAS
Trigger: GGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 90 bp TGGATTCCTGGCAGCAATGCTGTTCTGGGTTCAGGTAGACCACGGTaGCATCGAGGATGCCGCTGGGAGCTGTCACGTCGCCCTCCTTCT +
Preference number: 1 (lower is better)
Translates to: WIPGSNAVLGSGRPR*HRGCRWELSRRPPS
Trigger: AGAAGGAGGGCGACGTGACAGCTCCCAGCGGCATCCTCGATGTCACCGTGGTCTACCTGAACCCAGAACAGCATTGCTGCCAGGAATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 90 bp CTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTaGGGCAAATGTGCTGACACACTTACAGCCTCACAAGGCCCAGGT +
Preference number: 1 (lower is better)
Translates to: LCSHPSPPAPSVHIH*GKCADTLTASQGPG
Trigger: ACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 90 bp TCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTATaGTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGC +
Preference number: 1 (lower is better)
Translates to: SLRKGLHGLCSVPML*SHPSPPAPSVHIHC
Trigger: GCAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 90 bp TCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATaGTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCC +
Preference number: 1 (lower is better)
Translates to: SALCAKASMVYAAFL*YAPTLRLQPPQYTS
Trigger: GGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 90 bp CACAGCAGAGCTGCAGTTGGGATCAGCCAGGACACGGCCCCCGACTaGTCTGCTCTTCTGCCTCTTGGTCACCTCAGATGTTACAGAGGA +
Preference number: 1 (lower is better)
Translates to: HSRAAVGISQDTAPD*SALLPLGHLRCYRG
Trigger: TCCTCTGTAACATCTGAGGTGACCAAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGCAGCTCTGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 90 bp CATTCTGATGGCTTGCACGGGACTCCCGCGGAGACAGAAACTTGGTaGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCATG +
Preference number: 1 (lower is better)
Translates to: HSDGLHGTPAETETW*PQVILSALCAKASM
Trigger: CATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 90 bp CAACATTCTGATGGCTTGCACGGGACTCCCGCGGAGACAGAAACTTaGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCC +
Preference number: 1 (lower is better)
Translates to: QHSDGLHGTPAETET*WPQVILSALCAKAS
Trigger: GGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 90 bp ACCAGCACACATAAAAGCAGCAGCTCAGTGAGCATCTCCCATCCCTaGGTTTCCGGTTCAAGAGCATTTGGGGGCCAGGCGCCGTGGCTC +
Preference number: 1 (lower is better)
Translates to: TSTHKSSSSVSISHP*VSGSRAFGGQAPWL
Trigger: GAGCCACGGCGCCTGGCCCCCAAATGCTCTTGAACCGGAAACCCAGGGATGGGAGATGCTCACTGAGCTGCTGCTTTTATGTGTGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 90 bp GGTACCGGTCCACACACTCCACGGTCAGGTGCAGGCACAGGCTTGTaGAGTCCTTCATGGTGGCAACTTCCACCAGCCAGTCGATCAGAA +
Preference number: 1 (lower is better)
Translates to: GTGPHTPRSGAGTGL*SPSWWQLPPASRSE
Trigger: TTCTGATCGACTGGCTGGTGGAAGTTGCCACCATGAAGGACTTCACAAGCCTGTGCCTGCACCTGACCGTGGAGTGTGTGGACCGGTACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 90 bp TTCGCCTCCAGCCCCCTCAGTACACATCCACTGCGGCAAATGTGCTaGCACACTTACAGCCTCACAAGGCCCAGGTTCATGTCCTCCTCC +
Preference number: 1 (lower is better)
Translates to: FASSPLSTHPLRQMC*HTYSLTRPRFMSSS
Trigger: GGAGGAGGACATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAGGCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 90 bp GACTCCCGCGGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTaGTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATG +
Preference number: 1 (lower is better)
Translates to: DSRGDRNLVAASHPL*SLRKGLHGLCSVPM
Trigger: CATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGCGGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 90 bp TGGACAAGCCTCCTCATCACTGGATTCCTGGCAGCAATGCTGTTCTaGGTTCAGGTAGACCACGGTGACATCGAGGATGCCGCTGGGAGC +
Preference number: 1 (lower is better)
Translates to: WTSLLITGFLAAMLF*VQVDHGDIEDAAGS
Trigger: GCTCCCAGCGGCATCCTCGATGTCACCGTGGTCTACCTGAACCCAGAACAGCATTGCTGCCAGGAATCCAGTGATGAGGAGGCTTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 90 bp CTAAAGACAGCTGCGCTTCCCAGCAGCCTTTGGCAGCGTAGTCCCTaGGTTTTCGGAAGCTGTGGAGGCATCGCCCAGGATCTGACACAT +
Preference number: 1 (lower is better)
Translates to: LKTAALPSSLWQRSP*VFGSCGGIAQDLTH
Trigger: ATGTGTCAGATCCTGGGCGATGCCTCCACAGCTTCCGAAAACTCAGGGACTACGCTGCCAAAGGCTGCTGGGAAGCGCAGCTGTCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 90 bp GCGGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTaGGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTATGCT +
Preference number: 1 (lower is better)
Translates to: AETETWWPQVILSAL*AKASMVYAAFLCYA
Trigger: AGCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 90 bp GACACGGAAGGGACAGAGAGGTGCCCTCCACACAGTGTGGCCAACTaGTTCCAGGCTAAACTTTCCAAAGAGAGGGATCTGAGCTCTTCA +
Preference number: 1 (lower is better)
Translates to: DTEGTERCPPHSVAN*FQAKLSKERDLSSS
Trigger: TGAAGAGCTCAGATCCCTCTCTTTGGAAAGTTTAGCCTGGAAGCAGTTGGCCACACTGTGTGGAGGGCACCTCTCTGTCCCTTCCGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 90 bp AGCTGGCAGACGATCTCACTGGAAGCTCTCACCTCCAGTCCAAGCTaGTTTGCATTTGCACAGGCTTTGGCTAAAGACAGCTGCGCTTCC +
Preference number: 1 (lower is better)
Translates to: SWQTISLEALTSSPS*FAFAQALAKDSCAS
Trigger: GGAAGCGCAGCTGTCTTTAGCCAAAGCCTGTGCAAATGCAAACCAGCTTGGACTGGAGGTGAGAGCTTCCAGTGAGATCGTCTGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 90 bp TCCTCCTCACTGTGTATGCATAGGTTTATCCGCTTCACCTGTTGCTaGGGAACACTGCTCTCCGGGGGACTTGGGGGACGACACTGTAAA +
Preference number: 1 (lower is better)
Translates to: SSSLCMHRFIRFTCC*GTLLSGGLGGRHCK
Trigger: TTTACAGTGTCGTCCCCCAAGTCCCCCGGAGAGCAGTGTTCCCCAGCAACAGGTGAAGCGGATAAACCTATGCATACACAGTGAGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 90 bp TTCCAAAGAGAGGGATCTGAGCTCTTCACCCTCATTTCAACATTCTaGTGGCTTGCACGGGACTCCCGCGGAGACAGAAACTTGGTGGCC +
Preference number: 1 (lower is better)
Translates to: FQREGSELFTLISTF*WLARDSRGDRNLVA
Trigger: GGCCACCAAGTTTCTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAGAGCTCAGATCCCTCTCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 90 bp TTCTGCACGGAGAAGACTTGTTGTTTACTGACAGCCTGGGAAGCCTaGAATAGCTGGCAGACGATCTCACTGGAAGCTCTCACCTCCAGT +
Preference number: 1 (lower is better)
Translates to: FCTEKTCCLLTAWEA*NSWQTISLEALTSS
Trigger: ACTGGAGGTGAGAGCTTCCAGTGAGATCGTCTGCCAGCTATTTCAGGCTTCCCAGGCTGTCAGTAAACAACAAGTCTTCTCCGTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 90 bp GAAAAGAATGGCCCAGAAATTCAGCACAAAGAGAGGTGTTCACATTaGCGCCATCTGTGGGTCACATACGAACGCCTCTGGGACAGAGCT +
Preference number: 1 (lower is better)
Translates to: EKNGPEIQHKERCSH*RHLWVTYERLWDRA
Trigger: AGCTCTGTCCCAGAGGCGTTCGTATGTGACCCACAGATGGCGTCAATGTGAACACCTCTCTTTGTGCTGAATTTCTGGGCCATTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CAA 90 bp TCCCTGGCTCCCGGCTGGTGCGGACCAGGGGTTTGGGTCCAGGGGTaGCAGGGATCTGGGTGTCCAGCGCCAGTGCCTGTGGGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: SLAPGWCGPGVWVQG*QGSGCPAPVPVGPG
Trigger: CCCAGGACCCACAGGCACTGGCGCTGGACACCCAGATCCCTGCAACCCCTGGACCCAAACCCCTGGTCCGCACCAGCCGGGAGCCAGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CAA 90 bp GTCGTGACGTCCTTCCCTGGCTCCCGGCTGGTGCGGACCAGGGGTTaGGGTCCAGGGGTTGCAGGGATCTGGGTGTCCAGCGCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: VVTSFPGSRLVRTRG*GPGVAGIWVSSASA
Trigger: GGCACTGGCGCTGGACACCCAGATCCCTGCAACCCCTGGACCCAAACCCCTGGTCCGCACCAGCCGGGAGCCAGGGAAGGACGTCACGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp AAGCCCAGGGGTCTGCCTCCCTCCCACGGGCCCCCACAGCAGAGCTGCAGTTGGCGTGAACCACGGCCTTaGAGCAGCTTCCGCTCACCG +
Preference number: 2 (lower is better)
Translates to: KPRGLPPSHGPPQQSCSWREPRP*SSFRSP
Trigger: CGGTGAGCGGAAGCTGCTGCAAGGCCGTGGTTCACG...CCAACTGCAGCTCTGCTGTGGGGGCCCGTGGGAGGGAGGCAGACCCCTGGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGTCCCTGGCTCCCGGCTaGTGCGGACCAGGGGTTTGG +
Preference number: 2 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGSLAPG*CGPGVW
Trigger: CCAAACCCCTGGTCCGCACCAGCCGGGAGCCAGGGA...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR TCA 90 bp GGCACCAGCCTCCTCCGCAGGTACCGGTCCACACACTCCACGGTCAGGTGCAGGGCCGCTCAGCGAGACTaGAGAAGCGAGAGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: GTSLLRRYRSTHSTVRCRAAQRD*RSERPS
Trigger: TGAAGGCCTCTCGCTTCTTCAGTCTCGCTGAGCGGC...CCTGCACCTGACCGTGGAGTGTGTGGACCGGTACCTGCGGAGGAGGCTGGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp GGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAGTTGGCTAAAGACAGCTaGGCTTCCCAGCAGCCTTTG +
Preference number: 2 (lower is better)
Translates to: GSQAGWGVGGQAGVQQGELAKDS*ASQQPL
Trigger: CAAAGGCTGCTGGGAAGCGCAGCTGTCTTTAGCCAA...CTCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGGGCTGTGTCTGCCCGTaGGTCAGTCTGGCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGGCVCP*VSLARS
Trigger: GCTCCTGGCCAGACTGACGCACGGGCAGACACAGCC...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp ACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCACGTAGGCGGACAGGCTaGTGTGCAGCAGGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: TAEWSRAVSARASVWPGARRRTG*CAAGRA
Trigger: AGCTCTCCCTGCTGCACACCAGCCTGTCCGCCTACG...TGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
3UTR-3UTR CCA 90 bp GCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGGGGGGTCCCACAGCTGAGTaGTCCAGGGCTGTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: APFPCRSRVSVASRKAQGGPTAE*SRAVSA
Trigger: GGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC...CCCCTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGCCATGCAGGCCGAGGTaGATGAGGGGACAGTGGTGT +
Preference number: 2 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGPCRPR*MRGQWC
Trigger: ACACCACTGTCCCCTCATCCACCTCGGCCTGCATGG...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR TCA 90 bp CTGCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTGTAAGTGTTGTCCGTaGGCCATACGGCCTCCCGGA +
Preference number: 2 (lower is better)
Translates to: LQLGSARTRPPTALLFCLCKCCP*AIRPPG
Trigger: TCCGGGAGGCCGTATGGCTCACGGACAACACTTACA...GAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR TCA 90 bp CGGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGGCCCCGAGGGAGAGCTaGGGAAGGCGTGGATCTCCC +
Preference number: 2 (lower is better)
Translates to: RRQKLGGRKSSSLLSAQRAPRES*GRRGSP
Trigger: GGGAGATCCACGCCTTCCTCAGCTCTCCCTCGGGGC...CCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGGCCCTCCACACAGTGTaGCCAACTGCTTCCAGGCTA +
Preference number: 2 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGALHTV*PTASRL
Trigger: TAGCCTGGAAGCAGTTGGCCACACTGTGTGGAGGGC...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR CCA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGCCACCCAGAAGGAAGTaGGTGCCCCATGCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPPPRRK*VPHAGR
Trigger: TCGGCCTGCATGGGGCACCCACTTCCTTCTGGGTGG...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR TCA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGTCAGGTAGACCACGGTaGCATCGAGGATGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPSGRPR*HRGCRW
Trigger: CCAGCGGCATCCTCGATGTCACCGTGGTCTACCTGA...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp TTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACAGAGCCAGATGAAAGGTaGGGCACCCACATTCAGCCG +
Preference number: 2 (lower is better)
Translates to: LSVKAVSSRHGALVGLGTEPDER*GTHIQP
Trigger: CGGCTGAATGTGGGTGCCGCACCTTTCATCTGGCTC...TGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp ACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCAAGGAAGCTGCACAGGTaGTGGGTTCTCAGCTCCACA +
Preference number: 2 (lower is better)
Translates to: TAEWSRAVSARASVWPGARKLHR*WVLSST
Trigger: TGTGGAGCTGAGAACCCAGCACCTGTGCAGCTTCCT...TGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
3UTR-3UTR CCA 90 bp GCGGCAAATGTGCTGACACACTTACAGCCTCACAAGGCCCAGGTTCATGTCCTCGCGTCTCCTCCTGGCTaGACAGCTCCGCAGTGGGGG +
Preference number: 2 (lower is better)
Translates to: AANVLTHLQPHKAQVHVLASPPG*TAPQWG
Trigger: CCCCCACTGCGGAGCTGTCCAGCCAGGAGGAGACGC...GAGGACATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR TCA 90 bp GGAACACCAGGACACACATGGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGCTGGCACTCTGCCCTaGGGCTCTCGTGAACCACGG +
Preference number: 2 (lower is better)
Translates to: GTPGHTWAEASRDSETRKAGTLP*GSREPR
Trigger: CCGTGGTTCACGAGAGCCTCAGGGCAGAGTGCCAGC...CTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR TCA 90 bp GCCCTCACTCTCCTGGTCGCCTTCATAGCCAGAGCAGCAGTCCAGGCTCCAGTCACAGCCTGGGAAGCCTaGAATAGCTGGCAGACGATC +
Preference number: 2 (lower is better)
Translates to: ALTLLVAFIARAAVQAPVTAWEA*NSWQTI
Trigger: GATCGTCTGCCAGCTATTTCAGGCTTCCCAGGCTGT...GACTGGAGCCTGGACTGCTGCTCTGGCTATGAAGGCGACCAGGAGAGTGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCCAGGCCATTCACTTCTaGGCGGGCCTCATCAGACAC +
Preference number: 2 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFQAIHF*AGLIRH
Trigger: GTGTCTGATGAGGCCCGCGCAGAAGTGAATGGCCTG...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp TTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACAAGCGTTCCTATGCTATaGTCCCACCCTTCGCCTCCA +
Preference number: 2 (lower is better)
Translates to: LSVKAVSSRHGALVGLGTSVPML*SHPSPP
Trigger: TGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCT...TGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR GCA 90 bp GCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTTAACATTCTGATGGCTTaGACGGGACTCCCGCGGAGA +
Preference number: 2 (lower is better)
Translates to: AVGISQDTAPDCSALLPLNILMA*TGLPRR
Trigger: TCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTT...AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR CCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCAAGCTGCACAGGTGCTaGGTTCTCAGCTCCACAGGG +
Preference number: 2 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFKLHRC*VLSSTG
Trigger: CCCTGTGGAGCTGAGAACCCAGCACCTGTGCAGCTT...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp AGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAAGAGCTGAGGAAGGCGTaGATCTCCCCTGTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: RLTHAQGHTVDRTGLQFQELRKA*ISPVLR
Trigger: CCTCAGCACAGGGGAGATCCACGCCTTCCTCAGCTC...TTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp TCCACTGCGGCAAATGTGCTGACACACTTACAGCCTCACAAGGCCCAGGTTCATGCGGACAGGCTGGTGTaGAGCAGGGAGAGCTCGCAG +
Preference number: 2 (lower is better)
Translates to: STAANVLTHLQPHKAQVHADRLV*SRESSQ
Trigger: CTGCGAGCTCTCCCTGCTGCACACCAGCCTGTCCGC...ATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGCAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp GGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCATCCTCTCTGCTCTCTaGGCAAAGGCCTCCATGGTC +
Preference number: 2 (lower is better)
Translates to: GLKLPETVRHGRDREVPSILSAL*AKASMV
Trigger: GACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGAT...GGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR CCA 90 bp AGACACGGAAGGGACAGAGAGGTGCCCTCCACACAGTGTGGCCAACTGCTTCCACTGCCTCTGTCTTCCTaGAGGCTGTTCTCCCGCTTC +
Preference number: 2 (lower is better)
Translates to: RHGRDREVPSTQCGQLLPLPLSS*RLFSRF
Trigger: GAAGCGGGAGAACAGCCTCCAGGAAGACAGAGGCAG...TGGAAGCAGTTGGCCACACTGTGTGGAGGGCACCTCTCTGTCCCTTCCGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp TCCACTGCGGCAAATGTGCTGACACACTTACAGCCTCACAAGGCCCAGGTTCATGGGGTTGCAGGGATCTaGGTGTCCAGCGCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: STAANVLTHLQPHKAQVHGVAGI*VSSASA
Trigger: GGCACTGGCGCTGGACACCCAGATCCCTGCAACCCC...ATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGCAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR TCA 90 bp ACGGGGCTCTGGTGGGGCTGGGAACACCAGGACACACATGGGCTGAAGCTTCCACTCATTTCAACATTCTaGTGGCTTGCACGGGACTCC +
Preference number: 2 (lower is better)
Translates to: TGLWWGWEHQDTHGLKLPLISTF*WLARDS
Trigger: GGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAG...TGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR GCA 90 bp CAAGACGCAGGGAATGAGGTCTTCATAGGAGAATCCGGTGAGGTCCCACAGCTGCTGCAGCTGGCACTCTaGCCTGAGGCTCTCGTGAAC +
Preference number: 2 (lower is better)
Translates to: QDAGNEVFIGESGEVPQLLQLAL*PEALVN
Trigger: GTTCACGAGAGCCTCAGGGCAGAGTGCCAGCTGCAG...CAGCTGTGGGACCTCACCGGATTCTCCTATGAAGACCTCATTCCCTGCGTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp GCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGGGGGCAGTGCAATATGGATaGTTTGTGAGTCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: APFPCRSRVSVASRKAQGAVQYG*FVSPLQ
Trigger: CTGCAGAGGACTCACAAAGCATCCATATTGCACTGC...CCCCTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp GCTGTTCTCCCGCTTCCGTTTGGTTCTCCGCCCCGAGGGAGAGCTGAGGAAGGCCATTTGCACAGGCTTTaGCTAAAGACAGCTGCGCTT +
Preference number: 2 (lower is better)
Translates to: AVLPLPFGSPPRGRAEEGHLHRL*LKTAAL
Trigger: AAGCGCAGCTGTCTTTAGCCAAAGCCTGTGCAAATG...GCCTTCCTCAGCTCTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp AGACTTGCCTGTAGTCCTTGGGGGCGTCATCATGGAAGCACTTCTTATGGAGGCCGTAGGCGGACAGGCTaGTGTGCAGCAGGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: RLACSPWGRHHGSTSYGGRRRTG*CAAGRA
Trigger: AGCTCTCCCTGCTGCACACCAGCCTGTCCGCCTACG...GCCTCCATAAGAAGTGCTTCCATGATGACGCCCCCAAGGACTACAGGCAAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGGTAAACATGACTTCCTaGCCTGATGGTGGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPVNMTS*PDGGRA
Trigger: AGCCCTGCCACCATCAGGCCAGGAAGTCATGTTTAC...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR TCA 90 bp GCGGCAAATGTGCTGACACACTTACAGCCTCACAAGGCCCAGGTTCATGTCCTCGCATCGCCCAGGATCTaGCACATCTGTCCTCCTGTC +
Preference number: 2 (lower is better)
Translates to: AANVLTHLQPHKAQVHVLASPRI*HICPPV
Trigger: GACAGGAGGACAGATGTGTCAGATCCTGGGCGATGC...GAGGACATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR TCA 90 bp CATCTCCCATCCCTGGGTTTCCGGTTCAAGAGCATTTGGGGGCCAGGCGCCGTGTCAAGACGCAGGGAATaGGGTCTTCATAGGAGAATC +
Preference number: 2 (lower is better)
Translates to: HLPSLGFRFKSIWGPGAVSRRRE*GLHRRI
Trigger: GATTCTCCTATGAAGACCTCATTCCCTGCGTCTTGA...CACGGCGCCTGGCCCCCAAATGCTCTTGAACCGGAAACCCAGGGATGGGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGTCATTGAGTCCCTTCTaGACGGAGAAGACTTGTTGT +
Preference number: 2 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGSLSPF*TEKTCC
Trigger: ACAACAAGTCTTCTCCGTGCAGAAGGGACTCAATGA...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp CTTCACCCTCATTTCAACATTCTGATGGCTTGCACGGGACTCCCGCGGAGACAGGGAGCTTGTGGGACTTaGGGTGCTGACGGAGGAGTA +
Preference number: 2 (lower is better)
Translates to: LHPHFNILMACTGLPRRQGACGT*GADGGV
Trigger: TACTCCTCCGTCAGCACCGCAAGTCCCACAAGCTCC...CTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp GGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCGAGACAGAAACTTGGTaGCCGCAAGTCATCCTCTCT +
Preference number: 2 (lower is better)
Translates to: GLKLPETVRHGRDREVPSETETW*PQVILS
Trigger: AGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTC...GGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CAA 90 bp GGCAGACGATCTCACTGGAAGCTCTCACCTCCAGTCCAAGCTGGTTaGCATTTGCACAGGCTTTGGCTAAAGACAGCTGCGCTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: GRRSHWKLSPPVQAG*HLHRLWLKTAALPS
Trigger: GCTGGGAAGCGCAGCTGTCTTTAGCCAAAGCCTGTGCAAATGCAAACCAGCTTGGACTGGAGGTGAGAGCTTCCAGTGAGATCGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CAA 90 bp GAGAGGGATCTGAGCTCTTCACCCTCATTTCAACATTCTGATGGCTaGCACGGGACTCCCGCGGAGACAGAAACTTGGTGGCCGCAAGTC +
Preference number: 2 (lower is better)
Translates to: ERDLSSSPSFQHSDG*HGTPAETETWWPQV
Trigger: GACTTGCGGCCACCAAGTTTCTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAGAGCTCAGATCCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR TCA 90 bp CTCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTATGCTGGCAGCGTAGTCCCTaGGTTTTCGGAAGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: LCSLRKGLHGLCSVPMLCWQRSP*VFGSCG
Trigger: TCCACAGCTTCCGAAAACTCAGGGACTACGCTGCCA...GCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp AGGCGGAGACGATCTCGCCCATCATTCTCACCAGGTCCTCGTACTTGTAAGTGTCACTCCACGGTCAGGTaGAGGCACAGGCTTGTGAAG +
Preference number: 2 (lower is better)
Translates to: RRRRSRPSFSPGPRTCKCHSTVR*RHRLVK
Trigger: CTTCACAAGCCTGTGCCTGCACCTGACCGTGGAGTG...ACACTTACAAGTACGAGGACCTGGTGAGAATGATGGGCGAGATCGTCTCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp CAGGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGTGCCTTAAGCGTGAAAATCCTCTCTGCTCTCTaGGCAAAGGCCTCCATGGTC +
Preference number: 2 (lower is better)
Translates to: QGLKWCLTTQVTRALSVKILSAL*AKASMV
Trigger: GACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGAT...TTTCACGCTTAAGGCACGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR GCA 90 bp AGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAATACCCAGGTCACACGTaGCTTAAGCGTGAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: RLTHAQGHTVDRTGLQFQYPGHT*LKRESC
Trigger: ACAGCTTTCACGCTTAAGGCACGTGTGACCTGGGTA...TTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR CCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTGTAATCCACCACAGTaGGGACTCGAATCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFCNPPQ*GLESSL
Trigger: AAGGGAAGATTCGAGTCCCCACTGTGGTGGATTACA...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CAA 90 bp ATAGCGCTTGTCCTCAAACCGCTGCTTCACGGCGGTCAGAGAGACTaGCCTGTAGTCCTTGGGGGCGTCATCATGGAAGCACTTCTTATG +
Preference number: 2 (lower is better)
Translates to: IALVLKPLLHGGQRD*PVVLGGVIMEALLM
Trigger: CATAAGAAGTGCTTCCATGATGACGCCCCCAAGGACTACAGGCAAGTCTCTCTGACCGCCGTGAAGCAGCGGTTTGAGGACAAGCGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCCCAAGCAGTGCAATATaGATGCTTTGTGAGTCCTCT +
Preference number: 2 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFPSSAI*MLCESS
Trigger: AGAGGACTCACAAAGCATCCATATTGCACTGCTTGG...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp CAAGACGCAGGGAATGAGGTCTTCATAGGAGAATCCGGTGAGGTCCCACAGCTGAGTTTTCGGAAGCTGTaGAGGCATCGCCCAGGATCT +
Preference number: 2 (lower is better)
Translates to: QDAGNEVFIGESGEVPQLSFRKL*RHRPGS
Trigger: AGATCCTGGGCGATGCCTCCACAGCTTCCGAAAACT...CAGCTGTGGGACCTCACCGGATTCTCCTATGAAGACCTCATTCCCTGCGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp TCCTCTCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTACCTCCAGTCCAAGCTaGTTTGCATTTGCACAGGCT +
Preference number: 2 (lower is better)
Translates to: SSLLSAQRPPWSMQRSYATSSPS*FAFAQA
Trigger: AGCCTGTGCAAATGCAAACCAGCTTGGACTGGAGGT...AGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CCA 90 bp GCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTTAAGACAGGAAAAGAATaGCCCAGAAATTCAGCACAA +
Preference number: 2 (lower is better)
Translates to: AVGISQDTAPDCSALLPLKTGKE*PRNSAQ
Trigger: TTGTGCTGAATTTCTGGGCCATTCTTTTCCTGTCTT...AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CAA 90 bp GGAAAAGAATGGCCCAGAAATTCAGCACAAAGAGAGGTGTTCACATaGACGCCATCTGTGGGTCACATACGAACGCCTCTGGGACAGAGC +
Preference number: 2 (lower is better)
Translates to: GKEWPRNSAQREVFT*TPSVGHIRTPLGQS
Trigger: GCTCTGTCCCAGAGGCGTTCGTATGTGACCCACAGATGGCGTCAATGTGAACACCTCTCTTTGTGCTGAATTTCTGGGCCATTCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR CCA 90 bp GGCTGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCGCGGAGACAGAAACTTaGTGGCCGCAAGTCATCCTC +
Preference number: 2 (lower is better)
Translates to: GWSKIFVLQVNLNNGGNLAETET*WPQVIL
Trigger: GAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGC...GAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR TCA 90 bp TGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCTTGAATATGGATGCTTTGTaGGTCCTCTGCAGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: WSKIFVLQVNLNNGGNLLNMDAL*VLCSWH
Trigger: GTGCCAGCTGCAGAGGACTCACAAAGCATCCATATT...CAAGAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR GCA 90 bp TGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCTTGTGTAGAGGTAGGCTATaGCCAGCTTCACAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: WSKIFVLQVNLNNGGNLLCRGRL*PASQQL
Trigger: AAGCTGCTGTGAAGCTGGGCATAGCCTACCTCTACA...CAAGAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 72 bp CGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTaGTGTGCAGCAGGGAGAGCTCGCAGAGGAAGCTGC +
Preference number: 3 (lower is better)
Translates to: RQPGGLGRRRTG*CAAGRARRGSC
Trigger: GCAGCTTCCTCTGCGAGCTCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
3UTR CCA 72 bp GAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTaGCCAGGAGCAGGGCTGCGGCAGCCAGGCGGGCTG +
Preference number: 3 (lower is better)
Translates to: EWSRAVSARASV*PGAGLRQPGGL
Trigger: CAGCCCGCCTGGCTGCCGCAGCCCTGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
3UTR GCA 72 bp CCGGCTGGTGCGGACCAGGGGTTTGGGTCCAGGGGTTaGAGGGATCTGGGTGTCCAGCGCCAGTGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: PAGADQGFGSRG*RDLGVQRQCLW
Trigger: CCACAGGCACTGGCGCTGGACACCCAGATCCCTGCAACCCCTGGACCCAAACCCCTGGTCCGCACCAGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 72 bp CGGGTGCAGATGACCATGCAGGCGATGCCCAGCAGCTaGAGCCTGTACCGCGGCACCAGCCTCCTCCGCAGG +
Preference number: 3 (lower is better)
Translates to: RVQMTMQAMPSS*SLYRGTSLLRR
Trigger: CCTGCGGAGGAGGCTGGTGCCGCGGTACAGGCTCCAGCTGCTGGGCATCGCCTGCATGGTCATCTGCACCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 72 bp GGGCTGTGTGTGCGAGTCACTGTCCAGGGACAGCACTaGGGTAGGTTGGGGCAGGGCCCCCAAGCCACCGTC +
Preference number: 3 (lower is better)
Translates to: GLCVRVTVQGQH*GRLGQGPQATV
Trigger: GACGGTGGCTTGGGGGCCCTGCCCCAACCTACCTCAGTGCTGTCCCTGGACAGTGACTCGCACACACAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CAA 90 bp CCAGAGCAGCAGTCCAGGCTCCAGTCGAGGAAGCTGCCCAGCAGCGTCTCCTCCTTCTCCCGCTTCCGTTaGGTTCTCCGCCCCGAGGGA +
Preference number: 3 (lower is better)
Translates to: PEQQSRLQSRKLPSSVSSFSRFR*VLRPEG
Trigger: TCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAA...GGAGGAGACGCTGCTGGGCAGCTTCCTCGACTGGAGCCTGGACTGCTGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 72 bp GCTTGTGGGACTTGCGGTGCTGACGGAGGAGTACCCTaGGGTCGTGACGTCCTTCCCTGGCTCCCGGCTGGT +
Preference number: 3 (lower is better)
Translates to: ACGTCGADGGVP*GRDVLPWLPAG
Trigger: ACCAGCCGGGAGCCAGGGAAGGACGTCACGACCTCAGGGTACTCCTCCGTCAGCACCGCAAGTCCCACAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 72 bp TGCGAGTCACTGTCCAGGGACAGCACTGAGGTAGGTTaGGGCAGGGCCCCCAAGCCACCGTCCACGGAGCTT +
Preference number: 3 (lower is better)
Translates to: CESLSRDSTEVG*GRAPKPPSTEL
Trigger: AAGCTCCGTGGACGGTGGCTTGGGGGCCCTGCCCCAACCTACCTCAGTGCTGTCCCTGGACAGTGACTCGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 72 bp CCCTTACCATGGAAGCCCCACCCAGAAGGAAGTGGGTaGCCCATGCAGGCCGAGGTGGATGAGGGGACAGTG +
Preference number: 3 (lower is better)
Translates to: PLPWKPHPEGSG*PMQAEVDEGTV
Trigger: CACTGTCCCCTCATCCACCTCGGCCTGCATGGGGCACCCACTTCCTTCTGGGTGGGGCTTCCATGGTAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 72 bp AAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTaGGAACACCAGGACACACATGGGCTGAAGCTTCCA +
Preference number: 3 (lower is better)
Translates to: KLSAPGTGLWWG*EHQDTHGLKLP
Trigger: TGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 72 bp TGCAGCAGGGAGAGCTCGCAGAGGAAGCTGCACAGGTaGTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGC +
Preference number: 3 (lower is better)
Translates to: CSRESSQRKLHR*WVLSSTGTSVS
Trigger: GCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGCACCTGTGCAGCTTCCTCTGCGAGCTCTCCCTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
3UTR CCA 72 bp AGCAGGGAGAGCTCGCAGAGGAAGCTGCACAGGTGCTaGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: SRESSQRKLHRC*VLSSTGTSVSR
Trigger: CCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGCACCTGTGCAGCTTCCTCTGCGAGCTCTCCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
3UTR CCA 72 bp ACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTaGGTTCTCACCCCGACCACACCCCACCCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: TQSTGRVYSSNA*VLTPTTPHPGW
Trigger: CCACCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR CAA 90 bp GAAACTGAGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGGCGGTCAGAGAGACTaGCCTGTAGTCCTTGGGGGC +
Preference number: 3 (lower is better)
Translates to: ETEAHTCPGAHSRQDGSTGGQRD*PVVLGG
Trigger: GCCCCCAAGGACTACAGGCAAGTCTCTCTGACCGCC...TGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCTCAGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 72 bp GCTGCGCTTCCCAGCAGCCTTTGGCAGCGTAGTCCCTaGGTTTTCGGAAGCTGTGGAGGCATCGCCCAGGAT +
Preference number: 3 (lower is better)
Translates to: AALPSSLWQRSP*VFGSCGGIAQD
Trigger: ATCCTGGGCGATGCCTCCACAGCTTCCGAAAACTCAGGGACTACGCTGCCAAAGGCTGCTGGGAAGCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 72 bp GGCAGCAATGCTGTTCTGGGTTCAGGTAGACCACGGTaGCATCGAGGATGCCGCTGGGAGCTGTCACGTCGC +
Preference number: 3 (lower is better)
Translates to: GSNAVLGSGRPR*HRGCRWELSRR
Trigger: GCGACGTGACAGCTCCCAGCGGCATCCTCGATGTCACCGTGGTCTACCTGAACCCAGAACAGCATTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 72 bp CGACCACGGAGGGCGGATGAAGAGCCAGATGAAAGGTaGGGCACCCACATTCAGCCGCTCAGCGAGACTGAA +
Preference number: 3 (lower is better)
Translates to: RPRRADEEPDER*GTHIQPLSETE
Trigger: TTCAGTCTCGCTGAGCGGCTGAATGTGGGTGCCGCACCTTTCATCTGGCTCTTCATCCGCCCTCCGTGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 72 bp CTCCGCAGGTACCGGTCCACACACTCCACGGTCAGGTaGAGGCACAGGCTTGTGAAGTCCTTCATGGTGGCA +
Preference number: 3 (lower is better)
Translates to: LRRYRSTHSTVR*RHRLVKSFMVA
Trigger: TGCCACCATGAAGGACTTCACAAGCCTGTGCCTGCACCTGACCGTGGAGTGTGTGGACCGGTACCTGCGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 72 bp TGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATaGTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAG +
Preference number: 3 (lower is better)
Translates to: CAKASMVYAAFL*YAPTLRLQPPQ
Trigger: CTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 72 bp GGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGTaGCTTAAGCGTGAAAGCTGTCAGCTCCCGGCACGG +
Preference number: 3 (lower is better)
Translates to: GAQVVSDYPGHT*LKRESCQLPAR
Trigger: CCGTGCCGGGAGCTGACAGCTTTCACGCTTAAGGCACGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 72 bp GCTGCAGTTGGGATCAGCCAGGACACGGCCCCCGACTaGTCTGCTCTTCTGCCTCTTGGTCACCTCAGATGT +
Preference number: 3 (lower is better)
Translates to: AAVGISQDTAPD*SALLPLGHLRC
Trigger: ACATCTGAGGTGACCAAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 72 bp GCAGTGGGGGTGGTAACGAAGCTGCCTCTGTCTTCCTaGAGGCTGTTCTCCCGCTTCCGTTTGGTTCTCCGC +
Preference number: 3 (lower is better)
Translates to: AVGVVTKLPLSS*RLFSRFRLVLR
Trigger: GCGGAGAACCAAACGGAAGCGGGAGAACAGCCTCCAGGAAGACAGAGGCAGCTTCGTTACCACCCCCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 72 bp GGCTTGCACGGGACTCCCGCGGAGACAGAAACTTGGTaGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAG +
Preference number: 3 (lower is better)
Translates to: GLHGTPAETETW*PQVILSALCAK
Trigger: CTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGCGGGAGTCCCGTGCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 72 bp GATGGCTTGCACGGGACTCCCGCGGAGACAGAAACTTaGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCA +
Preference number: 3 (lower is better)
Translates to: DGLHGTPAETET*WPQVILSALCA
Trigger: TGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGCGGGAGTCCCGTGCAAGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 72 bp GGGGCTCTGGTGGGGCTGGGAACACCAGGACACACATaGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAG +
Preference number: 3 (lower is better)
Translates to: GALVGLGTPGHT*AEASRDSETRK
Trigger: CTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 72 bp ATGCTTTGTGAGTCCTCTGCAGCTGGCACTCTGCCCTaGGGCTCTCGTGAACCACGGCCTTGCAGCAGCTTC +
Preference number: 3 (lower is better)
Translates to: MLCESSAAGTLP*GSREPRPCSSF
Trigger: GAAGCTGCTGCAAGGCCGTGGTTCACGAGAGCCTCAGGGCAGAGTGCCAGCTGCAGAGGACTCACAAAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 72 bp GGCAGGAGTATCCGGGAGGCGGAGGTTACAGTGAGTTaGGAGTTGAGATCATGCCACTGCACTCCAGCCGGG +
Preference number: 3 (lower is better)
Translates to: GRSIREAEVTVS*ELRSCHCTPAG
Trigger: CCCGGCTGGAGTGCAGTGGCATGATCTCAACTCTCAACTCACTGTAACCTCCGCCTCCCGGATACTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 72 bp TGGTTGGGTGCTTGTAATCCCAGCTACCCAGGAGGCTaGGGCAGGAGTATCCGGGAGGCGGAGGTTACAGTG +
Preference number: 3 (lower is better)
Translates to: WLGACNPSYPGG*GRSIREAEVTV
Trigger: CACTGTAACCTCCGCCTCCCGGATACTCCTGCCTCAGCCTCCTGGGTAGCTGGGATTACAAGCACCCAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 72 bp GACAGAGCTCTAAAACGAGTCACGTGTCGTAGGGAGTaGGCCTGTGGCCAAGGCAGTCCTCGCAGTGTGCAG +
Preference number: 3 (lower is better)
Translates to: DRALKRVTCRRE*ACGQGSPRSVQ
Trigger: CTGCACACTGCGAGGACTGCCTTGGCCACAGGCCCACTCCCTACGACACGTGACTCGTTTTAGAGCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR-3UTR CAA 90 bp CAGGCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGCTGCACGGAGAAGACTaGTTGTTTACTGACAGCCTG +
Preference number: 3 (lower is better)
Translates to: QAPFPCRSRVSVASRKAQLHGED*LFTDSL
Trigger: CAGGCTGTCAGTAAACAACAAGTCTTCTCCGTGCAG...CTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 72 bp CCACACACTCCACGGTCAGGTGCAGGCACAGGCTTGTaGAGTCCTTCATGGTGGCAACTTCCACCAGCCAGT +
Preference number: 3 (lower is better)
Translates to: PHTPRSGAGTGL*SPSWWQLPPAS
Trigger: ACTGGCTGGTGGAAGTTGCCACCATGAAGGACTTCACAAGCCTGTGCCTGCACCTGACCGTGGAGTGTGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 72 bp AAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTATaGTCCCACCCTTCGCCTCCAGCCCCCTCAGTACAC +
Preference number: 3 (lower is better)
Translates to: KGLHGLCSVPML*SHPSPPAPSVH
Trigger: GTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 72 bp CCTCTCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATaGAGCGTTCCTATGCTATGCTCCCACCCTTCGCCT +
Preference number: 3 (lower is better)
Translates to: PLCSLRKGLHGL*SVPMLCSHPSP
Trigger: AGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 72 bp TCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTaGCTCTTGGTCACCTCAGATGTTACAGAGGACTTG +
Preference number: 3 (lower is better)
Translates to: SARTRPPTALLF*LLVTSDVTEDL
Trigger: CAAGTCCTCTGTAACATCTGAGGTGACCAAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 72 bp AGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTaGTCTTCTGCCTCTTGGTCACCTCAGATGTTACAG +
Preference number: 3 (lower is better)
Translates to: SWDQPGHGPRLL*SSASWSPQMLQ
Trigger: CTGTAACATCTGAGGTGACCAAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 72 bp AAGCCCCAAACCAGCAGATGTGGGCAGGGGCTCAAGTaGTGTCTGACTACCCAGGTCACACGTGCCTTAAGC +
Preference number: 3 (lower is better)
Translates to: KPQTSRCGQGLK*CLTTQVTRALS
Trigger: GCTTAAGGCACGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTGCCCACATCTGCTGGTTTGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 72 bp GGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTaGTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGC +
Preference number: 3 (lower is better)
Translates to: GDRNLVAASHPL*SLRKGLHGLCS
Trigger: GCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 72 bp GCTTCACGGCGGTCAGAGAGACTTGCCTGTAGTCCTTaGGGGCGTCATCATGGAAGCACTTCTTATGGAGGC +
Preference number: 3 (lower is better)
Translates to: ASRRSERLACSP*GRHHGSTSYGG
Trigger: GCCTCCATAAGAAGTGCTTCCATGATGACGCCCCCAAGGACTACAGGCAAGTCTCTCTGACCGCCGTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 72 bp CTGTGTATGCATAGGTTTATCCGCTTCACCTGTTGCTaGGGAACACTGCTCTCCGGGGGACTTGGGGGACGA +
Preference number: 3 (lower is better)
Translates to: LCMHRFIRFTCC*GTLLSGGLGGR
Trigger: TCGTCCCCCAAGTCCCCCGGAGAGCAGTGTTCCCCAGCAACAGGTGAAGCGGATAAACCTATGCATACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 72 bp CATAAAAGCAGCAGCTCAGTGAGCATCTCCCATCCCTaGGTTTCCGGTTCAAGAGCATTTGGGGGCCAGGCG +
Preference number: 3 (lower is better)
Translates to: HKSSSSVSISHP*VSGSRAFGGQA
Trigger: CGCCTGGCCCCCAAATGCTCTTGAACCGGAAACCCAGGGATGGGAGATGCTCACTGAGCTGCTGCTTTTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 72 bp AGCCCCCTCAGTACACATCCACTGCGGCAAATGTGCTaGCACACTTACAGCCTCACAAGGCCCAGGTTCATG +
Preference number: 3 (lower is better)
Translates to: SPLSTHPLRQMC*HTYSLTRPRFM
Trigger: CATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGCAGTGGATGTGTACTGAGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR GCA 72 bp GAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTaGGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTA +
Preference number: 3 (lower is better)
Translates to: ETWWPQVILSAL*AKASMVYAAFL
Trigger: TAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 72 bp CTCCTCATCACTGGATTCCTGGCAGCAATGCTGTTCTaGGTTCAGGTAGACCACGGTGACATCGAGGATGCC +
Preference number: 3 (lower is better)
Translates to: LLITGFLAAMLF*VQVDHGDIEDA
Trigger: GGCATCCTCGATGTCACCGTGGTCTACCTGAACCCAGAACAGCATTGCTGCCAGGAATCCAGTGATGAGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 72 bp AAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCATaGTCTATGCAGCGTTCCTATGCTATGCTCCCACCC +
Preference number: 3 (lower is better)
Translates to: KSSSLLSAQRPP*SMQRSYAMLPP
Trigger: GGGTGGGAGCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 72 bp TTCTCACCAGGTCCTCGTACTTGTAAGTGTTGTCCGTaGGCCATACGGCCTCCCGGATGGTCAGGATCTCTT +
Preference number: 3 (lower is better)
Translates to: FSPGPRTCKCCP*AIRPPGWSGSL
Trigger: AAGAGATCCTGACCATCCGGGAGGCCGTATGGCTCACGGACAACACTTACAAGTACGAGGACCTGGTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 72 bp GAGGGATCTGAGCTCTTCACCCTCATTTCAACATTCTaGTGGCTTGCACGGGACTCCCGCGGAGACAGAAAC +
Preference number: 3 (lower is better)
Translates to: EGSELFTLISTF*WLARDSRGDRN
Trigger: GTTTCTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAGAGCTCAGATCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CCA 72 bp ACACGGAAGGGACAGAGAGGTGCCCTCCACACAGTGTaGCCAACTGCTTCCAGGCTAAACTTTCCAAAGAGA +
Preference number: 3 (lower is better)
Translates to: TRKGQRGALHTV*PTASRLNFPKR
Trigger: TCTCTTTGGAAAGTTTAGCCTGGAAGCAGTTGGCCACACTGTGTGGAGGGCACCTCTCTGTCCCTTCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 72 bp GGCCCAGAAATTCAGCACAAAGAGAGGTGTTCACATTaGCGCCATCTGTGGGTCACATACGAACGCCTCTGG +
Preference number: 3 (lower is better)
Translates to: GPEIQHKERCSH*RHLWVTYERLW
Trigger: CCAGAGGCGTTCGTATGTGACCCACAGATGGCGTCAATGTGAACACCTCTCTTTGTGCTGAATTTCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 72 bp CACATAGCACCAGCACACATAAAAGCAGCAGCTCAGTaGGCATCTCCCATCCCTGGGTTTCCGGTTCAAGAG +
Preference number: 3 (lower is better)
Translates to: HIAPAHIKAAAQ*ASPIPGFPVQE
Trigger: CTCTTGAACCGGAAACCCAGGGATGGGAGATGCTCACTGAGCTGCTGCTTTTATGTGTGCTGGTGCTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR GCA 72 bp GCTGCTTCTCCTCATCCTCGAACAGACTCAGCACTCTaGCCAAGCAGTGCAATATGGATGCTTTGTGAGTCC +
Preference number: 3 (lower is better)
Translates to: AASPHPRTDSAL*PSSAIWMLCES
Trigger: GGACTCACAAAGCATCCATATTGCACTGCTTGGGCAGAGTGCTGAGTCTGTTCGAGGATGAGGAGAAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR-3UTR CAA 90 bp GGCTGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCGTGCGGACCAGGGGTTaGGGTCCAGGGGTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GWSKIFVLQVNLNNGGNLVRTRG*GPGVAG
Trigger: CCCTGCAACCCCTGGACCCAAACCCCTGGTCCGCAC...GAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 72 bp ACGATCTCACTGGAAGCTCTCACCTCCAGTCCAAGCTaGTTTGCATTTGCACAGGCTTTGGCTAAAGACAGC +
Preference number: 3 (lower is better)
Translates to: TISLEALTSSPS*FAFAQALAKDS
Trigger: GCTGTCTTTAGCCAAAGCCTGTGCAAATGCAAACCAGCTTGGACTGGAGGTGAGAGCTTCCAGTGAGATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR TCA 72 bp GAGAAGACTTGTTGTTTACTGACAGCCTGGGAAGCCTaGAATAGCTGGCAGACGATCTCACTGGAAGCTCTC +
Preference number: 3 (lower is better)
Translates to: EKTCCLLTAWEA*NSWQTISLEAL
Trigger: GAGAGCTTCCAGTGAGATCGTCTGCCAGCTATTTCAGGCTTCCCAGGCTGTCAGTAAACAACAAGTCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CCA 72 bp TCTCTACCGAAAATACAAAAATTAGCTGGGCGTGGTTaGGTGCTTGTAATCCCAGCTACCCAGGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: SLPKIQKLAGRG*VLVIPATQEAE
Trigger: CTCAGCCTCCTGGGTAGCTGGGATTACAAGCACCCAACCACGCCCAGCTAATTTTTGTATTTTCGGTAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR TCA 72 bp TCCCTTATAGTAGCAAAAAGACAGCTGCCGCGGACATaGACACACATAGCACCAGCACACATAAAAGCAGCA +
Preference number: 3 (lower is better)
Translates to: SLIVAKRQLPRT*THIAPAHIKAA
Trigger: TGCTGCTTTTATGTGTGCTGGTGCTATGTGTGTTCATGTCCGCGGCAGCTGTCTTTTTGCTACTATAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAGTCCAGGGACAGCACTaGGGTAGGTTGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RQPGGLGRRRTGWCAAGRVQGQH*GRLGQG
Trigger: GCCCTGCCCCAACCTACCTCAGTGCTGTCCCTGGAC...TCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CTGCGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGCAGCGTCTCCTCCTaGCTGGACAGCTCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LRQPGGLGRRRTGWCAAGSSVSS*LDSSAV
Trigger: CACTGCGGAGCTGTCCAGCCAGGAGGAGACGCTGCT...CCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp GGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAGGCGCACCAGCGCAGATaGCGACGTGGTGCAACCGTG +
Preference number: 4 (lower is better)
Translates to: GSQAGWGVGGQAGVQQGEAHQRR*RRGATV
Trigger: CACGGTTGCACCACGTCGCCATCTGCGCTGGTGCGC...CTCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR TCA 90 bp CGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAGTGAGGTCCCACAGCTaGGTGGTCCAGGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RQPGGLGRRRTGWCAAGRVRSHS*VVQGCV
Trigger: GACACAGCCCTGGACCACTCAGCTGTGGGACCTCAC...TCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR CCA 90 bp GGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAGGGTCCCACAGCTGAGTaGTCCAGGGCTGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GSQAGWGVGGQAGVQQGEGPTAE*SRAVSA
Trigger: GGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC...CTCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR TCA 90 bp GGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAGTCAGGTAGACCACGGTaGCATCGAGGATGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GSQAGWGVGGQAGVQQGESGRPR*HRGCRW
Trigger: CCAGCGGCATCCTCGATGTCACCGTGGTCTACCTGA...CTCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp ACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCAGGCAGCCAGGCGGGCTaGGGCGTAGGCGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: TAEWSRAVSARASVWPGAGSQAG*GVGGQA
Trigger: AGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCC...TGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR CCA 90 bp AAGCCCAGGGGTCTGCCTCCCTCCCACGGGCCCCCACAGCAGAGCTGCAGTTGGGGGGTTGCAGGGATCTaGGTGTCCAGCGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KPRGLPPSHGPPQQSCSWGVAGI*VSSASA
Trigger: GGCACTGGCGCTGGACACCCAGATCCCTGCAACCCC...CCAACTGCAGCTCTGCTGTGGGGGCCCGTGGGAGGGAGGCAGACCCCTGGGCTT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAGGGGCTCTGGTGGGGCTaGGAACACCAGGACACACAT +
Preference number: 4 (lower is better)
Translates to: GSQAGWGVGGQAGVQQGEGLWWG*EHQDTH
Trigger: ATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCC...CTCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp ACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCAAGCCGGGACGGGGTGTaGGCTCTCAGCGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: TAEWSRAVSARASVWPGASRDGV*ALSARG
Trigger: CCCCCGAGCGCTGAGAGCCCACACCCCGTCCCGGCT...TGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564236.1
3UTR CAA 72 bp CCCGGCTGGTGCGGACCAGGGGTTTGGGTCCAGGGGTaGCAGGGATCTGGGTGTCCAGCGCCAGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PGWCGPGVWVQG*QGSGCPAPVPV
Trigger: CACAGGCACTGGCGCTGGACACCCAGATCCCTGCAACCCCTGGACCCAAACCCCTGGTCCGCACCAGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp CTGCGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGGCAGGCACAGGCTTGTaGAGTCCTTCATGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LRQPGGLGRRRTGWCAAGAGTGL*SPSWWQ
Trigger: TTGCCACCATGAAGGACTTCACAAGCCTGTGCCTGC...CCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR TCA 90 bp CGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGACATAGGAGAATCCGGTaGGGTCCCACAGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: RQPGGLGRRRTGWCAAGRHRRIR*GPTAEW
Trigger: CCACTCAGCTGTGGGACCTCACCGGATTCTCCTATG...TCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR GCA 90 bp GGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAGGCAACCGTGGCCTCCTaGTCCATGGTCGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: GSQAGWGVGGQAGVQQGEATVAS*SMVESS
Trigger: GGAAGATTCGACCATGGAGCAGGAGGCCACGGTTGC...CTCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR CCA 90 bp CGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAAAGCTGCACAGGTGCTaGGTTCTCAGCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: RQPGGLGRRRTGWCAAGRKLHRC*VLSSTG
Trigger: CCCTGTGGAGCTGAGAACCCAGCACCTGTGCAGCTT...TCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR CCA 90 bp GTAGACCACGGTGACATCGAGGATGCCGCTGGGAGCTGTCACGTCGCCCTCCTTGGCAGCCAGGCGGGCTaGGGCGTAGGCGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: VDHGDIEDAAGSCHVALLGSQAG*GVGGQA
Trigger: AGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCC...AAGGAGGGCGACGTGACAGCTCCCAGCGGCATCCTCGATGTCACCGTGGTCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CAA 72 bp TCCTTCCCTGGCTCCCGGCTGGTGCGGACCAGGGGTTaGGGTCCAGGGGTTGCAGGGATCTGGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SFPGSRLVRTRG*GPGVAGIWVSS
Trigger: GCTGGACACCCAGATCCCTGCAACCCCTGGACCCAAACCCCTGGTCCGCACCAGCCGGGAGCCAGGGAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp CGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAACAGCCTGGGAAGCCTaGAATAGCTGGCAGACGATC +
Preference number: 4 (lower is better)
Translates to: RQPGGLGRRRTGWCAAGRTAWEA*NSWQTI
Trigger: GATCGTCTGCCAGCTATTTCAGGCTTCCCAGGCTGT...TCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR TCA 90 bp CTGCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCGCCCCGAGGGAGAGCTaGGGAAGGCGTGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LQLGSARTRPPTALLFCLAPRES*GRRGSP
Trigger: GGGAGATCCACGCCTTCCTCAGCTCTCCCTCGGGGC...GAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCAGGGCTGAGGGTCTGGCCCGGATaGTGTTCACGCCGATGCTGC +
Preference number: 4 (lower is better)
Translates to: EWSRAVSARASVWPGAGLRVWPG*CSRRCC
Trigger: GCAGCATCGGCGTGAACATCATCCGGGCCAGACCCT...CAGCCCTGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR GCA 90 bp GGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGCTGTGTCTGCCCGTaGGTCAGTCTGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GPTAEWSRAVSARASVWPGCVCP*VSLARS
Trigger: GCTCCTGGCCAGACTGACGCACGGGCAGACACAGCC...TGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR GCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGCTGGCTCCCGGCTGGTaGGGACCAGGGGTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGLAPGW*GPGVWV
Trigger: GACCCAAACCCCTGGTCCGCACCAGCCGGGAGCCAG...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CCGTCCACGGAGCTTGTGGGACTTGCGGTGCTGACGGAGGAGTACCCTGAGGTCTCCCCAGGCGTGGGCTaGTGGCTCCCAGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PSTELVGLAVLTEEYPEVSPGVG*WLPGSL
Trigger: AAGGGAGCCTGGGAGCCAGCAGCCCACGCCTGGGGA...GACCTCAGGGTACTCCTCCGTCAGCACCGCAAGTCCCACAAGCTCCGTGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp GGAGAATCCGGTGAGGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGGGCTCCTTGGTGCAGTaGCGCATGCAGGCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GESGEVPQLSGPGLCLPVGSLVQ*RMQAQR
Trigger: GCGCTGGGCCTGCATGCGGCACTGCACCAAGGAGCC...CACGGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACCTCACCGGATTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR CCA 90 bp GAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCAGGGCTGCGTAGGCGGACAGGCTaGTGTGCAGCAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: EWSRAVSARASVWPGAGLRRRTG*CAAGRA
Trigger: AGCTCTCCCTGCTGCACACCAGCCTGTCCGCCTACG...CAGCCCTGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR CCA 90 bp CTGCGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGACACCAGGACACACATaGGCTGAAGCTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LRQPGGLGRRRTGWCAAGTPGHT*AEASRD
Trigger: GTCTCTGGAAGCTTCAGCCCATGTGTGTCCTGGTGT...CCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGGGCACGGGGCTCTGGTaGGGCTGGGAACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGGTGLW*GWEHQD
Trigger: GTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGTGCC...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCAGGGTGTGTTGTGGTCAGCCCGTTCCCAGGGAGAGGCCACCCGGCACGGGGCTCTaGTGGGGCTGGGAACACCAG +
Preference number: 4 (lower is better)
Translates to: EVDGSRVCCGQPVPRERPPGTGL*WGWEHQ
Trigger: CTGGTGTTCCCAGCCCCACCAGAGCCCCGTGCCGGG...TGGCCTCTCCCTGGGAACGGGCTGACCACAACACACCCTGCTGCCATCCACTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AAGCCCAGGGGTCTGCCTCCCTCCCACGGGCCCCCACAGCAGAGCTGCAGTTGGGGGCAGGGGCTCAAGTaGTGTCTGACTACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KPRGLPPSHGPPQQSCSWGQGLK*CLTTQV
Trigger: GACCTGGGTAGTCAGACACCACTTGAGCCCCTGCCC...CCAACTGCAGCTCTGCTGTGGGGGCCCGTGGGAGGGAGGCAGACCCCTGGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp ACGGGGCTCTGGTGGGGCTGGGAACACCAGGACACACATGGGCTGAAGCTTCCACAGGCTCCCCAGGCGTaGGCTGCTGGCTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TGLWWGWEHQDTHGLKLPQAPQA*AAGSQA
Trigger: AGCCTGGGAGCCAGCAGCCCACGCCTGGGGAGCCTG...TGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTTGCCCCGAGGGAGAGCTaGGGAAGGCGTGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: AVGISQDTAPDCSALLPLAPRES*GRRGSP
Trigger: GGGAGATCCACGCCTTCCTCAGCTCTCCCTCGGGGC...AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CTGCGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGTGTAGAGGTAGGCTATaGCCAGCTTCACAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LRQPGGLGRRRTGWCAAGCRGRL*PASQQL
Trigger: AAGCTGCTGTGAAGCTGGGCATAGCCTACCTCTACA...CCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp GGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCACGTGAACCACGGCCTTaGAGCAGCTTCCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: GPTAEWSRAVSARASVWPREPRP*SSFRSP
Trigger: CGGTGAGCGGAAGCTGCTGCAAGGCCGTGGTTCACG...TGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp CTGCGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGACAGACTCAGCACTCTaGCCAAGCAGTGCAATATGG +
Preference number: 4 (lower is better)
Translates to: LRQPGGLGRRRTGWCAAGTDSAL*PSSAIW
Trigger: CCATATTGCACTGCTTGGGCAGAGTGCTGAGTCTGT...CCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp AAGCCCAGGGGTCTGCCTCCCTCCCACGGGCCCCCACAGCAGAGCTGCAGTTGGCACTCCACGGTCAGGTaGAGGCACAGGCTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: KPRGLPPSHGPPQQSCSWHSTVR*RHRLVK
Trigger: CTTCACAAGCCTGTGCCTGCACCTGACCGTGGAGTG...CCAACTGCAGCTCTGCTGTGGGGGCCCGTGGGAGGGAGGCAGACCCCTGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTTCTGGCTCCCGGCTGGTaGGGACCAGGGGTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: AVGISQDTAPDCSALLPLLAPGW*GPGVWV
Trigger: GACCCAAACCCCTGGTCCGCACCAGCCGGGAGCCAG...AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCAGGGCTGGAAGGGACAGAGAGGTaGCCTCCACACAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: EWSRAVSARASVWPGAGLEGTER*PPHSVA
Trigger: GGCCACACTGTGTGGAGGGCACCTCTCTGTCCCTTC...CAGCCCTGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp GGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCATGTTCACGCCGATGCTaGACGCGTAGCGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: GPTAEWSRAVSARASVWPCSRRC*TRSAPA
Trigger: CGCTGGTGCGCTACGCGTGCAGCATCGGCGTGAACA...TGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR CCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCGCCCGTGCGTCAGTCTaGCCAGGAGCAGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFARASV*PGAGLR
Trigger: CCGCAGCCCTGCTCCTGGCCAGACTGACGCACGGGC...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGTCCCACAGCTGAGTaGTCCAGGGCTGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GPTAEWSRAVSARASVWPGPTAE*SRAVSA
Trigger: GGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC...TGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR CCA 90 bp AAGCCCAGGGGTCTGCCTCCCTCCCACGGGCCCCCACAGCAGAGCTGCAGTTGGCTGCCTCTGTCTTCCTaGAGGCTGTTCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: KPRGLPPSHGPPQQSCSWLPLSS*RLFSRF
Trigger: GAAGCGGGAGAACAGCCTCCAGGAAGACAGAGGCAG...CCAACTGCAGCTCTGCTGTGGGGGCCCGTGGGAGGGAGGCAGACCCCTGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCCCTCACTCTCCTGGTCGCCTTCATAGCCAGAGCAGCAGTCCAGGCTCCAGTCGCGTCTCCTCCTGGCTaGACAGCTCCGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ALTLLVAFIARAAVQAPVASPPG*TAPQWG
Trigger: CCCCCACTGCGGAGCTGTCCAGCCAGGAGGAGACGC...GACTGGAGCCTGGACTGCTGCTCTGGCTATGAAGGCGACCAGGAGAGTGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGCAGCGCCAGTGCCTGTaGGTCCTGGGGTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGQRQCL*VLGSLV
Trigger: GACAAGGGACCCCAGGACCCACAGGCACTGGCGCTG...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCCCTCACTCTCCTGGTCGCCTTCATAGCCAGAGCAGCAGTCCAGGCTCCAGTCTCCCTGGCTCCCGGCTaGTGCGGACCAGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ALTLLVAFIARAAVQAPVSLAPG*CGPGVW
Trigger: CCAAACCCCTGGTCCGCACCAGCCGGGAGCCAGGGA...GACTGGAGCCTGGACTGCTGCTCTGGCTATGAAGGCGACCAGGAGAGTGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp GCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTTTCCCTGGCTCCCGGCTaGTGCGGACCAGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AVGISQDTAPDCSALLPLSLAPG*CGPGVW
Trigger: CCAAACCCCTGGTCCGCACCAGCCGGGAGCCAGGGA...AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CTGCGGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGGAGACAGAAACTTGGTaGCCGCAAGTCATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LRQPGGLGRRRTGWCAAGETETW*PQVILS
Trigger: AGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTC...CCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp ACGGGGCTCTGGTGGGGCTGGGAACACCAGGACACACATGGGCTGAAGCTTCCAGGCACGGGGCTCTGGTaGGGCTGGGAACACCAGGAC +
Preference number: 4 (lower is better)
Translates to: TGLWWGWEHQDTHGLKLPGTGLW*GWEHQD
Trigger: GTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGTGCC...TGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CCAGAGCAGCAGTCCAGGCTCCAGTCGAGGAAGCTGCCCAGCAGCGTCTCCTCCCCACCCAGAAGGAAGTaGGTGCCCCATGCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: PEQQSRLQSRKLPSSVSSPPRRK*VPHAGR
Trigger: TCGGCCTGCATGGGGCACCCACTTCCTTCTGGGTGG...GGAGGAGACGCTGCTGGGCAGCTTCCTCGACTGGAGCCTGGACTGCTGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp AAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACACCCCACCCAGAAGGAAGTaGGTGCCCCATGCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: KRESCQLPARGSGGAGNTPPRRK*VPHAGR
Trigger: TCGGCCTGCATGGGGCACCCACTTCCTTCTGGGTGG...GGTGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGCGGCAAACAGGCTCCCCAGGCGTaGGCTGCTGGCTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LCSHPSPPAPSVHIHCGKQAPQA*AAGSQA
Trigger: AGCCTGGGAGCCAGCAGCCCACGCCTGGGGAGCCTG...TTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGGGGGAGGCCATGGTCACATaGCCCCAGGCAGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: APFPCRSRVSVASRKAQGEAMVT*PQAGSP
Trigger: TGGGGAGCCTGCCTGGGGCCATGTGACCATGGCCTC...CCCCTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGTCACACGTGCCTTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGCTGGCACTCTGCCCTaGGGCTCTCGTGAACCACGG +
Preference number: 4 (lower is better)
Translates to: GHTCLKRESCQLPARGSGAGTLP*GSREPR
Trigger: CCGTGGTTCACGAGAGCCTCAGGGCAGAGTGCCAGC...ACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAAGGCACGTGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp AAGGAAGTGGGTGCCCCATGCAGGCCGAGGTGGATGAGGGGACAGTGGTGTGCTGCGGACAGGCTGGTGTaGAGCAGGGAGAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: KEVGAPCRPRWMRGQWCAADRLV*SRESSQ
Trigger: CTGCGAGCTCTCCCTGCTGCACACCAGCCTGTCCGC...AGCACACCACTGTCCCCTCATCCACCTCGGCCTGCATGGGGCACCCACTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GCTGTTCTCCCGCTTCCGTTTGGTTCTCCGCCCCGAGGGAGAGCTGAGGAAGGCGAAGTGGGTGCCCCATaGAGGCCGAGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: AVLPLPFGSPPRGRAEEGEVGAP*RPRWMR
Trigger: CCTCATCCACCTCGGCCTGCATGGGGCACCCACTTC...GCCTTCCTCAGCTCTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp ACGGGGCTCTGGTGGGGCTGGGAACACCAGGACACACATGGGCTGAAGCTTCCAGCAGTCCTCGCAGTGTaGAGGGACGCAGGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: TGLWWGWEHQDTHGLKLPAVLAV*RDAGPL
Trigger: AAGGGGGCCTGCGTCCCTGCACACTGCGAGGACTGC...TGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CATCTCCCATCCCTGGGTTTCCGGTTCAAGAGCATTTGGGGGCCAGGCGCCGTGGCAGTCCTCGCAGTGTaGAGGGACGCAGGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: HLPSLGFRFKSIWGPGAVAVLAV*RDAGPL
Trigger: AAGGGGGCCTGCGTCCCTGCACACTGCGAGGACTGC...CACGGCGCCTGGCCCCCAAATGCTCTTGAACCGGAAACCCAGGGATGGGAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCAGGGTGTGTTGTGGTCAGCCCGTTCCCAGGGAGAGGCCATTGGCACACCTACAGTaGACCACGCCGCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: EVDGSRVCCGQPVPRERPLAHLQ*TTPPLP
Trigger: GGGGAGCGGCGGCGTGGTCCACTGTAGGTGTGCCAA...TGGCCTCTCCCTGGGAACGGGCTGACCACAACACACCCTGCTGCCATCCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCGCGTCTCCTCCTGGCTaGACAGCTCCGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLKLPETVRHGRDREVPSASPPG*TAPQWG
Trigger: CCCCCACTGCGGAGCTGTCCAGCCAGGAGGAGACGC...GGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCTGTTCTCCCGCTTCCGTTTGGTTCTCCGCCCCGAGGGAGAGCTGAGGAAGGCCATCGAGGATGCCGCTaGGAGCTGTCACGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: AVLPLPFGSPPRGRAEEGHRGCR*ELSRRP
Trigger: AGGGCGACGTGACAGCTCCCAGCGGCATCCTCGATG...GCCTTCCTCAGCTCTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp AAGGAAGTGGGTGCCCCATGCAGGCCGAGGTGGATGAGGGGACAGTGGTGTGCTGGGGTTGCAGGGATCTaGGTGTCCAGCGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KEVGAPCRPRWMRGQWCAGVAGI*VSSASA
Trigger: GGCACTGGCGCTGGACACCCAGATCCCTGCAACCCC...AGCACACCACTGTCCCCTCATCCACCTCGGCCTGCATGGGGCACCCACTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGCCAGGCGTGGGCTGCTaGCTCCCAGGCTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPPGVGC*LPGSLS
Trigger: GGAAAGGGAGCCTGGGAGCCAGCAGCCCACGCCTGG...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCACAGCAGGGTGTGTTGTaGTCAGCCCGTTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GPTAEWSRAVSARASVWPQQGVL*SARSQG
Trigger: TCCCTGGGAACGGGCTGACCACAACACACCCTGCTG...TGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp CTGCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCGCCGCTCAGCGAGACTaGAGAAGCGAGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LQLGSARTRPPTALLFCLAAQRD*RSERPS
Trigger: TGAAGGCCTCTCGCTTCTTCAGTCTCGCTGAGCGGC...GAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGTCTATGCAGCGTTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGCTGGCACTCTGCCCTaGGGCTCTCGTGAACCACGG +
Preference number: 4 (lower is better)
Translates to: GLCSVPMLCSHPSPPAPSAGTLP*GSREPR
Trigger: CCGTGGTTCACGAGAGCCTCAGGGCAGAGTGCCAGC...TGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCATGTAAGTGTTGTCCGTaGGCCATACGGCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GPTAEWSRAVSARASVWPCKCCP*AIRPPG
Trigger: TCCGGGAGGCCGTATGGCTCACGGACAACACTTACA...TGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR TCA 90 bp AAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACACCCATAGGAGAATCCGGTaGGGTCCCACAGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: KRESCQLPARGSGGAGNTHRRIR*GPTAEW
Trigger: CCACTCAGCTGTGGGACCTCACCGGATTCTCCTATG...GGTGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACATGGGACTTGCGGTGCTaGCGGAGGAGTACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSVKAVSSRHGALVGLGTWDLRC*RRSTLR
Trigger: CCTCAGGGTACTCCTCCGTCAGCACCGCAAGTCCCA...TGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCGCAGGCCGAGGTGGATaGGGGGACAGTGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GLKLPETVRHGRDREVPSAGRGG*GDSGVL
Trigger: GAGCACACCACTGTCCCCTCATCCACCTCGGCCTGC...GGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp AAGCCCAGGGGTCTGCCTCCCTCCCACGGGCCCCCACAGCAGAGCTGCAGTTGGGAGAGGTGTTCACATTaGCGCCATCTGTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: KPRGLPPSHGPPQQSCSWERCSH*RHLWVT
Trigger: TGTGACCCACAGATGGCGTCAATGTGAACACCTCTC...CCAACTGCAGCTCTGCTGTGGGGGCCCGTGGGAGGGAGGCAGACCCCTGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCAGGGCTGTTGTCCTCAAACCGCTaGTTCACGGCGGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: EWSRAVSARASVWPGAGLLSSNR*FTAVRE
Trigger: CTCTCTGACCGCCGTGAAGCAGCGGTTTGAGGACAA...CAGCCCTGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp GCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTTGAAGTGGGTGCCCCATaGAGGCCGAGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: AVGISQDTAPDCSALLPLEVGAP*RPRWMR
Trigger: CCTCATCCACCTCGGCCTGCATGGGGCACCCACTTC...AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CTGCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCGACACGGCCCCCGACTaGTCTGCTCTTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LQLGSARTRPPTALLFCLDTAPD*SALLPL
Trigger: AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTC...GAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp ATAGGAGAATCCGGTGAGGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCTGGTGCAGTGCCGCATaGAGGCCCAGCGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: IGESGEVPQLSGPGLCLPWCSAA*RPSAGS
Trigger: AGACCCTGCGCTGGGCCTGCATGCGGCACTGCACCA...GGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACCTCACCGGATTCTCCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR CCA 90 bp ACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCACGGGGAGACTCAAGATaGTCAGGTTTCGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TAEWSRAVSARASVWPGARGDSR*SGFGAS
Trigger: GGAGGCCCCGAAACCTGACCATCTTGAGTCTCCCCG...TGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CTTCACCCTCATTTCAACATTCTGATGGCTTGCACGGGACTCCCGCGGAGACAGGGCAGCCAGGCGGGCTaGGGCGTAGGCGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LHPHFNILMACTGLPRRQGSQAG*GVGGQA
Trigger: AGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCC...CTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp ACTGAAGCCCCAAACCAGCAGATGTGGGCAGGGGCTCAAGTGGTGTCTGACTACGCCCGTGCGTCAGTCTaGCCAGGAGCAGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TEAPNQQMWAGAQVVSDYARASV*PGAGLR
Trigger: CCGCAGCCCTGCTCCTGGCCAGACTGACGCACGGGC...GTAGTCAGACACCACTTGAGCCCCTGCCCACATCTGCTGGTTTGGGGCTTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CATCTCCCATCCCTGGGTTTCCGGTTCAAGAGCATTTGGGGGCCAGGCGCCGTGTCTCCCGCTTCCGTTTaGTTCTCCGCCCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HLPSLGFRFKSIWGPGAVSPASV*FSAPRE
Trigger: CTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGA...CACGGCGCCTGGCCCCCAAATGCTCTTGAACCGGAAACCCAGGGATGGGAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp ATAGGAGAATCCGGTGAGGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCCAGCGCCAGTGCCTGTaGGTCCTGGGGTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: IGESGEVPQLSGPGLCLPQRQCL*VLGSLV
Trigger: GACAAGGGACCCCAGGACCCACAGGCACTGGCGCTG...GGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACCTCACCGGATTCTCCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp AGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGTGACGTCCTTCCCTaGCTCCCGGCTGGTGCGGAC +
Preference number: 4 (lower is better)
Translates to: RLTHAQGHTVDRTGLQFQRDVLP*LPAGAD
Trigger: GTCCGCACCAGCCGGGAGCCAGGGAAGGACGTCACG...TTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AAGCCCAGGGGTCTGCCTCCCTCCCACGGGCCCCCACAGCAGAGCTGCAGTTGGGTAAACATGACTTCCTaGCCTGATGGTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KPRGLPPSHGPPQQSCSWVNMTS*PDGGRA
Trigger: AGCCCTGCCACCATCAGGCCAGGAAGTCATGTTTAC...CCAACTGCAGCTCTGCTGTGGGGGCCCGTGGGAGGGAGGCAGACCCCTGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CCGTCCACGGAGCTTGTGGGACTTGCGGTGCTGACGGAGGAGTACCCTGAGGTCCCATGCAGGCCGAGGTaGATGAGGGGACAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PSTELVGLAVLTEEYPEVPCRPR*MRGQWC
Trigger: ACACCACTGTCCCCTCATCCACCTCGGCCTGCATGG...GACCTCAGGGTACTCCTCCGTCAGCACCGCAAGTCCCACAAGCTCCGTGGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp ATAGGAGAATCCGGTGAGGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGCGCAGATGGCGACGTaGTGCAACCGTGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IGESGEVPQLSGPGLCLPAQMAT*CNRGLL
Trigger: CAGGAGGCCACGGTTGCACCACGTCGCCATCTGCGC...GGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACCTCACCGGATTCTCCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR CCA 90 bp GCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGTGGGGACGCTCGGGGGCTCCTTaGTGCAGTGCCGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: APQGLASAGPPCNPPQWGRSGAP*CSAACR
Trigger: CCTGCATGCGGCACTGCACCAAGGAGCCCCCGAGCG...TCCCCACTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR TCA 90 bp ACGGGGCTCTGGTGGGGCTGGGAACACCAGGACACACATGGGCTGAAGCTTCCAGCCGCTCAGCGAGACTaGAGAAGCGAGAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TGLWWGWEHQDTHGLKLPAAQRD*RSERPS
Trigger: TGAAGGCCTCTCGCTTCTTCAGTCTCGCTGAGCGGC...TGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGGTGAGGTCCCACAGCTaGGTGGTCCAGGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPVRSHS*VVQGCV
Trigger: GACACAGCCCTGGACCACTCAGCTGTGGGACCTCAC...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACATCAGGTAGACCACGGTaGCATCGAGGATGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LSVKAVSSRHGALVGLGTSGRPR*HRGCRW
Trigger: CCAGCGGCATCCTCGATGTCACCGTGGTCTACCTGA...TGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCGACGGAGGAGTACCCTaGGGTCGTGACGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFDGGVP*GRDVLP
Trigger: GGGAAGGACGTCACGACCTCAGGGTACTCCTCCGTC...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp AAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACACCGCCTGGCCAACATGGTaGAATCCCGTCTCTACCGAA +
Preference number: 4 (lower is better)
Translates to: KRESCQLPARGSGGAGNTAWPTW*NPVSTE
Trigger: TTCGGTAGAGACGGGATTTCACCATGTTGGCCAGGC...GGTGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp ACGGGGCTCTGGTGGGGCTGGGAACACCAGGACACACATGGGCTGAAGCTTCCACTGCAGCTGGCACTCTaGCCTGAGGCTCTCGTGAAC +
Preference number: 4 (lower is better)
Translates to: TGLWWGWEHQDTHGLKLPLQLAL*PEALVN
Trigger: GTTCACGAGAGCCTCAGGGCAGAGTGCCAGCTGCAG...TGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GAAACTGAGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGCGGACAGGCTGGTGTaGAGCAGGGAGAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: ETEAHTCPGAHSRQDGSTADRLV*SRESSQ
Trigger: CTGCGAGCTCTCCCTGCTGCACACCAGCCTGTCCGC...TGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCTCAGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGTGGGGAGCGGACAGGCTGGTGTaGAGCAGGGAGAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: APQGLASAGPPCNPPQWGADRLV*SRESSQ
Trigger: CTGCGAGCTCTCCCTGCTGCACACCAGCCTGTCCGC...TCCCCACTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR GCA 90 bp GGTCACACGTGCCTTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTTCCAGTCGAGGAAGCTaGCCAGCAGCGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GHTCLKRESCQLPARGSGSSRGS*PAASPP
Trigger: AGGAGGAGACGCTGCTGGGCAGCTTCCTCGACTGGA...ACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAAGGCACGTGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGGGGGGAGCTTGTGGGACTTaGGGTGCTGACGGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: APFPCRSRVSVASRKAQGGACGT*GADGGV
Trigger: TACTCCTCCGTCAGCACCGCAAGTCCCACAAGCTCC...CCCCTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCAGGGTGTGTTGTGGTCAGCCCGTTCCCAGGGAGAGGCCAGAGGGGACAGTGGTGTaGTCACAGCTGTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EVDGSRVCCGQPVPRERPEGTVV*SQLSAP
Trigger: GGGAGCTGACAGCTGTGAGCACACCACTGTCCCCTC...TGGCCTCTCCCTGGGAACGGGCTGACCACAACACACCCTGCTGCCATCCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GGTCTATGCAGCGTTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCACCAGAAGGAAGTGGGTaGCCCATGCAGGCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: GLCSVPMLCSHPSPPAPSPEGSG*PMQAEV
Trigger: CACCTCGGCCTGCATGGGGCACCCACTTCCTTCTGG...TGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CATCTCCCATCCCTGGGTTTCCGGTTCAAGAGCATTTGGGGGCCAGGCGCCGTGGACACGGCCCCCGACTaGTCTGCTCTTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HLPSLGFRFKSIWGPGAVDTAPD*SALLPL
Trigger: AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTC...CACGGCGCCTGGCCCCCAAATGCTCTTGAACCGGAAACCCAGGGATGGGAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp ACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCACAGGCTCCCTTTCCATaGAGGAGCAGAGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TAEWSRAVSARASVWPGAQAPFP*RSRVSV
Trigger: CACGGAGACTCTGCTCCTGCATGGAAAGGGAGCCTG...TGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp CTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCACACAGTGTTCCCCAGGCGTGGGCTaGTGGCTCCCAGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LPETVRHGRDREVPSTQCSPGVG*WLPGSL
Trigger: AAGGGAGCCTGGGAGCCAGCAGCCCACGCCTGGGGA...ACACTGTGTGGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp TTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGGCCCGTGCGTCAGTCTaGCCAGGAGCAGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: FSAPQGLASAGPPCNPPQARASV*PGAGLR
Trigger: CCGCAGCCCTGCTCCTGGCCAGACTGACGCACGGGC...CTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR CCA 90 bp CGGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCGTGACGTCCTTCCCTaGCTCCCGGCTGGTGCGGAC +
Preference number: 4 (lower is better)
Translates to: RRQKLGGRKSSSLLSAQRRDVLP*LPAGAD
Trigger: GTCCGCACCAGCCGGGAGCCAGGGAAGGACGTCACG...CCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGTCTATGCAGCGTTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAAGCACTGAGGTAGGTTaGGGCAGGGCCCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: GLCSVPMLCSHPSPPAPSSTEVG*GRAPKP
Trigger: TGGCTTGGGGGCCCTGCCCCAACCTACCTCAGTGCT...TGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGACAAGCCTCCTCATCACTGGATTCCTGGCAGCAATGCTGTTCTGGGTTCAGGCCCGGCACGGGGCTCTaGTGGGGCTGGGAACACCAG +
Preference number: 4 (lower is better)
Translates to: GQASSSLDSWQQCCSGFRPGTGL*WGWEHQ
Trigger: CTGGTGTTCCCAGCCCCACCAGAGCCCCGTGCCGGG...CCTGAACCCAGAACAGCATTGCTGCCAGGAATCCAGTGATGAGGAGGCTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGCCAAACCAGCAGATGTaGGCAGGGGCTCAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGPNQQM*AGAQVV
Trigger: CACCACTTGAGCCCCTGCCCACATCTGCTGGTTTGG...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCGGAGCAGAGTCTCCGTaGCCAGCAGGAAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFGAESP*PAGKPR
Trigger: CCTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCC...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGTGGGGAGAGGCCATGGTCACATaGCCCCAGGCAGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: APQGLASAGPPCNPPQWGEAMVT*PQAGSP
Trigger: TGGGGAGCCTGCCTGGGGCCATGTGACCATGGCCTC...TCCCCACTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp GCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTTCAGCAGGGTGTGTTGTaGTCAGCCCGTTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: AVGISQDTAPDCSALLPLQQGVL*SARSQG
Trigger: TCCCTGGGAACGGGCTGACCACAACACACCCTGCTG...AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp ATAGGAGAATCCGGTGAGGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGACGTGGTGCAACCGTaGCCTCCTGCTCCATGGTCG +
Preference number: 4 (lower is better)
Translates to: IGESGEVPQLSGPGLCLPDVVQP*PPAPWS
Trigger: CGACCATGGAGCAGGAGGCCACGGTTGCACCACGTC...GGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACCTCACCGGATTCTCCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
3UTR CAA 72 bp CACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTaGGGTTCTCACCCCGACCACACCCCACCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: HTVDRTGLQFQR*GSHPDHTPPRV
Trigger: CACCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GCTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCAGCCCTGAGGCTCTCGTaGACCACGGCCTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGFSAPQGLASAGPPCNPALRLS*TTALQQ
Trigger: CTGCTGCAAGGCCGTGGTTCACGAGAGCCTCAGGGC...TGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp CCGTCCACGGAGCTTGTGGGACTTGCGGTGCTGACGGAGGAGTACCCTGAGGTCTGGCAGCGTAGTCCCTaGGTTTTCGGAAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PSTELVGLAVLTEEYPEVWQRSP*VFGSCG
Trigger: TCCACAGCTTCCGAAAACTCAGGGACTACGCTGCCA...GACCTCAGGGTACTCCTCCGTCAGCACCGCAAGTCCCACAAGCTCCGTGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp AAGCCCAGGGGTCTGCCTCCCTCCCACGGGCCCCCACAGCAGAGCTGCAGTTGGAGACTTGTTGTTTACTaGCAGCCTGGGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KPRGLPPSHGPPQQSCSWRLVVY*QPGKPE
Trigger: TTCAGGCTTCCCAGGCTGTCAGTAAACAACAAGTCT...CCAACTGCAGCTCTGCTGTGGGGGCCCGTGGGAGGGAGGCAGACCCCTGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp AGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAAGTGAGGTCCCACAGCTaGGTGGTCCAGGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RLTHAQGHTVDRTGLQFQVRSHS*VVQGCV
Trigger: GACACAGCCCTGGACCACTCAGCTGTGGGACCTCAC...TTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp AGACACGGAAGGGACAGAGAGGTGCCCTCCACACAGTGTGGCCAACTGCTTCCATGGGACTTGCGGTGCTaGCGGAGGAGTACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RHGRDREVPSTQCGQLLPWDLRC*RRSTLR
Trigger: CCTCAGGGTACTCCTCCGTCAGCACCGCAAGTCCCA...TGGAAGCAGTTGGCCACACTGTGTGGAGGGCACCTCTCTGTCCCTTCCGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGCACCAGCCTCCTCCGCAGGTACCGGTCCACACACTCCACGGTCAGGTGCAGGCTCATTTCAACATTCTaGTGGCTTGCACGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GTSLLRRYRSTHSTVRCRLISTF*WLARDS
Trigger: GGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAG...CCTGCACCTGACCGTGGAGTGTGTGGACCGGTACCTGCGGAGGAGGCTGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp ACTGAAGCCCCAAACCAGCAGATGTGGGCAGGGGCTCAAGTGGTGTCTGACTACGCAGGCCGAGGTGGATaGGGGGACAGTGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TEAPNQQMWAGAQVVSDYAGRGG*GDSGVL
Trigger: GAGCACACCACTGTCCCCTCATCCACCTCGGCCTGC...GTAGTCAGACACCACTTGAGCCCCTGCCCACATCTGCTGGTTTGGGGCTTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGCACCAGCCTCCTCCGCAGGTACCGGTCCACACACTCCACGGTCAGGTGCAGGGTGTCAGGATGGCATTaGGGGGCTGGAGTAAGATTT +
Preference number: 4 (lower is better)
Translates to: GTSLLRRYRSTHSTVRCRVSGWH*GAGVRF
Trigger: AAATCTTACTCCAGCCCCTCAATGCCATCCTGACAC...CCTGCACCTGACCGTGGAGTGTGTGGACCGGTACCTGCGGAGGAGGCTGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp AACCAGCAGATGTGGGCAGGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGAGCTACCCAGGAGGCTaGGGCAGGAGTATCCGGGAG +
Preference number: 4 (lower is better)
Translates to: NQQMWAGAQVVSDYPGHTSYPGG*GRSIRE
Trigger: CTCCCGGATACTCCTGCCTCAGCCTCCTGGGTAGCT...CGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTGCCCACATCTGCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GAAACTGAGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAAGCTACCCAGGAGGCTaGGGCAGGAGTATCCGGGAG +
Preference number: 4 (lower is better)
Translates to: ETEAHTCPGAHSRQDGSTSYPGG*GRSIRE
Trigger: CTCCCGGATACTCCTGCCTCAGCCTCCTGGGTAGCT...TGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCTCAGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CATCTCCCATCCCTGGGTTTCCGGTTCAAGAGCATTTGGGGGCCAGGCGCCGTGAAAGCAGCAGCTCAGTaGGCATCTCCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HLPSLGFRFKSIWGPGAVKAAAQ*ASPIPG
Trigger: CCCAGGGATGGGAGATGCTCACTGAGCTGCTGCTTT...CACGGCGCCTGGCCCCCAAATGCTCTTGAACCGGAAACCCAGGGATGGGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp AAGGAAGTGGGTGCCCCATGCAGGCCGAGGTGGATGAGGGGACAGTGGTGTGCTCAGCTGCCGCGGACATaGACACACATAGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: KEVGAPCRPRWMRGQWCAQLPRT*THIAPA
Trigger: TGCTGGTGCTATGTGTGTTCATGTCCGCGGCAGCTG...AGCACACCACTGTCCCCTCATCCACCTCGGCCTGCATGGGGCACCCACTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCATTGGCTAAAGACAGCTaGGCTTCCCAGCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: GPTAEWSRAVSARASVWPLAKDS*ASQQPL
Trigger: CAAAGGCTGCTGGGAAGCGCAGCTGTCTTTAGCCAA...TGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp GCTGTTCTCCCGCTTCCGTTTGGTTCTCCGCCCCGAGGGAGAGCTGAGGAAGGCAGGAAGCTGCACAGGTaGTGGGTTCTCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: AVLPLPFGSPPRGRAEEGRKLHR*WVLSST
Trigger: TGTGGAGCTGAGAACCCAGCACCTGTGCAGCTTCCT...GCCTTCCTCAGCTCTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp TTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGGCTGTGTCTGCCCGTaGGTCAGTCTGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FLCYAPTLRLQPPQYTSTGCVCP*VSLARS
Trigger: GCTCCTGGCCAGACTGACGCACGGGCAGACACAGCC...AGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GGTCTATGCAGCGTTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCATCCAGTCGAGGAAGCTaGCCAGCAGCGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLCSVPMLCSHPSPPAPSSSRGS*PAASPP
Trigger: AGGAGGAGACGCTGCTGGGCAGCTTCCTCGACTGGA...TGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp AGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAAGTTGCTGGGGAACACTaGTCTCCGGGGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: RLTHAQGHTVDRTGLQFQVAGEH*SPGDLG
Trigger: CCCCAAGTCCCCCGGAGAGCAGTGTTCCCCAGCAAC...TTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CCAGAGCAGCAGTCCAGGCTCCAGTCGAGGAAGCTGCCCAGCAGCGTCTCCTCCTATGCAGCGTTCCTATaGTATGCTCCCACCCTTCGC +
Preference number: 4 (lower is better)
Translates to: PEQQSRLQSRKLPSSVSSYAAFL*YAPTLR
Trigger: GCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATA...GGAGGAGACGCTGCTGGGCAGCTTCCTCGACTGGAGCCTGGACTGCTGCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCGAGGGGACAGTGGTGTaGTCACAGCTGTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFEGTVV*SQLSAP
Trigger: GGGAGCTGACAGCTGTGAGCACACCACTGTCCCCTC...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp TTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGTCGGGGGCTCCTTGGTaGAGTGCCGCATGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FSAPQGLASAGPPCNPPQSGAPW*SAACRP
Trigger: GGGCCTGCATGCGGCACTGCACCAAGGAGCCCCCGA...CTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR CCA 90 bp CTGCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCCTTGCCTGTAGTCCTTaGGGGCGTCATCATGGAAGC +
Preference number: 4 (lower is better)
Translates to: LQLGSARTRPPTALLFCLLACSP*GRHHGS
Trigger: GCTTCCATGATGACGCCCCCAAGGACTACAGGCAAG...GAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp TCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGAGCAGCGTCTCCTCCTaGCTGGACAGCTCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: SYAMLPPFASSPLSTHPLSSVSS*LDSSAV
Trigger: CACTGCGGAGCTGTCCAGCCAGGAGGAGACGCTGCT...CAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGGGGTCCCTTGTCCTCTaGACAAGCCTCCTCATCACT +
Preference number: 4 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGGSLVL*TSLLIT
Trigger: AGTGATGAGGAGGCTTGTCCAGAGGACAAGGGACCC...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGAGTGCCTGTGGGTCCTaGGGTCCCTTGTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPSACGS*GPLSSG
Trigger: TCCAGAGGACAAGGGACCCCAGGACCCACAGGCACT...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGTAAACATGACTTCCTaGCCTGATGGTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GPTAEWSRAVSARASVWPVNMTS*PDGGRA
Trigger: AGCCCTGCCACCATCAGGCCAGGAAGTCATGTTTAC...TGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp GCTGTTCTCCCGCTTCCGTTTGGTTCTCCGCCCCGAGGGAGAGCTGAGGAAGGCGCGGAGACAGAAACTTaGTGGCCGCAAGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: AVLPLPFGSPPRGRAEEGAETET*WPQVIL
Trigger: GAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGC...GCCTTCCTCAGCTCTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGTGGATGAGGGGACAGTaGTGTGCTCACAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGWMRGQ*CAHSCQ
Trigger: CTGACAGCTGTGAGCACACCACTGTCCCCTCATCCA...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCACGTGTCGTAGGGAGTaGGCCTGTGGCCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GLKLPETVRHGRDREVPSTCRRE*ACGQGS
Trigger: ACTGCCTTGGCCACAGGCCCACTCCCTACGACACGT...GGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCGCCCACACACTGGCGTaGTTGTCCACCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PRGTQSTGRVYSSNAWVLAHTLA*LSTRSF
Trigger: GAAGGACCTGGTGGACAACCACGCCAGTGTGTGGGC...GAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397066.9
CDS-3UTR CCA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGGAGCTTCAGGTTCCCTaGAGACGGCCACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPELQVP*RRPQLL
Trigger: CAGGAGCTGTGGCCGTCTCCAGGGAACCTGAAGCTC...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397066.9
CDS-3UTR TCA 90 bp GGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCGCATCGCCCAGGATCTaGCACATCTGTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GLKLPETVRHGRDREVPSASPRI*HICPPV
Trigger: GACAGGAGGACAGATGTGTCAGATCCTGGGCGATGC...GGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGGCATCGCCCAGGATCTaGCACATCTGTCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPASPRI*HICPPV
Trigger: GACAGGAGGACAGATGTGTCAGATCCTGGGCGATGC...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCAGGGCTGAGACTTGTTGTTTACTaGCAGCCTGGGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: EWSRAVSARASVWPGAGLRLVVY*QPGKPE
Trigger: TTCAGGCTTCCCAGGCTGTCAGTAAACAACAAGTCT...CAGCCCTGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR TCA 90 bp CTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGCGGCAAATGTAAGTGTTGTCCGTaGGCCATACGGCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LCSHPSPPAPSVHIHCGKCKCCP*AIRPPG
Trigger: TCCGGGAGGCCGTATGGCTCACGGACAACACTTACA...TTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp AGAGCTCTAAAACGAGTCACGTGTCGTAGGGAGTGGGCCTGTGGCCAAGGCAGTAGTACCCTGAGGTCGTaGCGTCCTTCCCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RALKRVTCRREWACGQGSSTLRS*RPSLAP
Trigger: GGGAGCCAGGGAAGGACGTCACGACCTCAGGGTACT...ACTGCCTTGGCCACAGGCCCACTCCCTACGACACGTGACTCGTTTTAGAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GCTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCAGACGGAGGAGTACCCTaGGGTCGTGACGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: AGFSAPQGLASAGPPCNPDGGVP*GRDVLP
Trigger: GGGAAGGACGTCACGACCTCAGGGTACTCCTCCGTC...TGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp GGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCGGCTCAAGTGGTGTCTaGCTACCCAGGTCACACGTG +
Preference number: 4 (lower is better)
Translates to: GLKLPETVRHGRDREVPSGSSGV*LPRSHV
Trigger: CACGTGTGACCTGGGTAGTCAGACACCACTTGAGCC...GGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGGGCTCAAGTGGTGTCTaGCTACCCAGGTCACACGTG +
Preference number: 4 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPGSSGV*LPRSHV
Trigger: CACGTGTGACCTGGGTAGTCAGACACCACTTGAGCC...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCAAAGCAGCAGCTCAGTaGGCATCTCCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRGTQSTGRVYSSNAWVLKAAAQ*ASPIPG
Trigger: CCCAGGGATGGGAGATGCTCACTGAGCTGCTGCTTT...GAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CAGGCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGCTCACAACACCCCTGTaGGGTAGGTATCATTGCCCC +
Preference number: 4 (lower is better)
Translates to: QAPFPCRSRVSVASRKAQLTTPL*GRYHCP
Trigger: GGGGCAATGATACCTACCTCACAGGGGTGTTGTGAG...CTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp AAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACACCTGTAGAGGTAGGCTATaGCCAGCTTCACAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KRESCQLPARGSGGAGNTCRGRL*PASQQL
Trigger: AAGCTGCTGTGAAGCTGGGCATAGCCTACCTCTACA...GGTGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCGAGCCAGATGAAAGGTaGGGCACCCACATTCAGCCG +
Preference number: 4 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFEPDER*GTHIQP
Trigger: CGGCTGAATGTGGGTGCCGCACCTTTCATCTGGCTC...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGTTGGCTAAAGACAGCTaGGCTTCCCAGCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGLAKDS*ASQQPL
Trigger: CAAAGGCTGCTGGGAAGCGCAGCTGTCTTTAGCCAA...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp ATAGGAGAATCCGGTGAGGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCCACTCCACGGTCAGGTaGAGGCACAGGCTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: IGESGEVPQLSGPGLCLPHSTVR*RHRLVK
Trigger: CTTCACAAGCCTGTGCCTGCACCTGACCGTGGAGTG...GGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACCTCACCGGATTCTCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR GCA 90 bp TTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGGGCTGTGTCTGCCCGTaGGTCAGTCTGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FSAPQGLASAGPPCNPPQGCVCP*VSLARS
Trigger: GCTCCTGGCCAGACTGACGCACGGGCAGACACAGCC...CTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR GCA 90 bp AAGGAAGTGGGTGCCCCATGCAGGCCGAGGTGGATGAGGGGACAGTGGTGTGCTTTGTCCTCAAACCGCTaGTTCACGGCGGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: KEVGAPCRPRWMRGQWCALSSNR*FTAVRE
Trigger: CTCTCTGACCGCCGTGAAGCAGCGGTTTGAGGACAA...AGCACACCACTGTCCCCTCATCCACCTCGGCCTGCATGGGGCACCCACTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CGGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGGTTGCTGGGGAACACTaGTCTCCGGGGGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: RRQKLGGRKSSSLLSAQRVAGEH*SPGDLG
Trigger: CCCCAAGTCCCCCGGAGAGCAGTGTTCCCCAGCAAC...CCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp ACGGGGCTCTGGTGGGGCTGGGAACACCAGGACACACATGGGCTGAAGCTTCCAATCCGCTTCACCTGTTaGTGGGGAACACTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TGLWWGWEHQDTHGLKLPIRFTC*WGTLLS
Trigger: GGAGAGCAGTGTTCCCCAGCAACAGGTGAAGCGGAT...TGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GAGTGGTCCAGGGCTGTGTCTGCCCGTGCGTCAGTCTGGCCAGGAGCAGGGCTGTCAGTACACATCCACTaGGGCAAATGTGCTGACACA +
Preference number: 4 (lower is better)
Translates to: EWSRAVSARASVWPGAGLSVHIH*GKCADT
Trigger: TGTGTCAGCACATTTGCCGCAGTGGATGTGTACTGA...CAGCCCTGCTCCTGGCCAGACTGACGCACGGGCAGACACAGCCCTGGACCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp GCCCTCACTCTCCTGGTCGCCTTCATAGCCAGAGCAGCAGTCCAGGCTCCAGTCAACATTCTGATGGCTTaGACGGGACTCCCGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ALTLLVAFIARAAVQAPVNILMA*TGLPRR
Trigger: TCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTT...GACTGGAGCCTGGACTGCTGCTCTGGCTATGAAGGCGACCAGGAGAGTGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp GAAACTGAGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGAAGGGACAGAGAGGTaGCCTCCACACAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: ETEAHTCPGAHSRQDGSTEGTER*PPHSVA
Trigger: GGCCACACTGTGTGGAGGGCACCTCTCTGTCCCTTC...TGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCTCAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CGGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCAGAAGGAAGTGGGTaGCCCATGCAGGCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: RRQKLGGRKSSSLLSAQRPEGSG*PMQAEV
Trigger: CACCTCGGCCTGCATGGGGCACCCACTTCCTTCTGG...CCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GGTCTATGCAGCGTTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAACTGAGGCTCACACATaGCCAGGGGCACACAGTCGA +
Preference number: 4 (lower is better)
Translates to: GLCSVPMLCSHPSPPAPSTEAHT*PGAHSR
Trigger: TCGACTGTGTGCCCCTGGGCATGTGTGAGCCTCAGT...TGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GCTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACAGATGGCGACGTGGTaGAACCGTGGCCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGFSAPQGLASAGPPCNPQMATW*NRGLLL
Trigger: GAGCAGGAGGCCACGGTTGCACCACGTCGCCATCTG...TGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR CCA 90 bp CAGGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGTGCCTTAAGCGTGAAATTGGCACACCTACAGTaGACCACGCCGCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: QGLKWCLTTQVTRALSVKLAHLQ*TTPPLP
Trigger: GGGGAGCGGCGGCGTGGTCCACTGTAGGTGTGCCAA...TTTCACGCTTAAGGCACGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CGGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCGTAGGCGGACAGGCTaGTGTGCAGCAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RRQKLGGRKSSSLLSAQRRRRTG*CAAGRA
Trigger: AGCTCTCCCTGCTGCACACCAGCCTGTCCGCCTACG...CCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCATGTCTCCCGCTTCCGTTTaGTTCTCCGCCCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ETWWPQVILSALCAKASMSPASV*FSAPRE
Trigger: CTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGA...CATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCTGTTCTCCCGCTTCCGTTTGGTTCTCCGCCCCGAGGGAGAGCTGAGGAAGGCGCAGCAATGCTGTTCTaGGTTCAGGTAGACCACGGT +
Preference number: 4 (lower is better)
Translates to: AVLPLPFGSPPRGRAEEGAAMLF*VQVDHG
Trigger: ACCGTGGTCTACCTGAACCCAGAACAGCATTGCTGC...GCCTTCCTCAGCTCTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CATCTCCCATCCCTGGGTTTCCGGTTCAAGAGCATTTGGGGGCCAGGCGCCGTGGGGTCCCTTGTCCTCTaGACAAGCCTCCTCATCACT +
Preference number: 4 (lower is better)
Translates to: HLPSLGFRFKSIWGPGAVGSLVL*TSLLIT
Trigger: AGTGATGAGGAGGCTTGTCCAGAGGACAAGGGACCC...CACGGCGCCTGGCCCCCAAATGCTCTTGAACCGGAAACCCAGGGATGGGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CAGGCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGGCGGAGACAGAAACTTaGTGGCCGCAAGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QAPFPCRSRVSVASRKAQAETET*WPQVIL
Trigger: GAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGC...CTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGTCTATGCAGCGTTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGCCCTCCACACAGTGTaGCCAACTGCTTCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: GLCSVPMLCSHPSPPAPSALHTV*PTASRL
Trigger: TAGCCTGGAAGCAGTTGGCCACACTGTGTGGAGGGC...TGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCGGAGCAGAGTCTCCGTaGCCAGCAGGAAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DRNLVAASHPLCSLRKGLGAESP*PAGKPR
Trigger: CCTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCC...GAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCAGGGTGTGTTGTGGTCAGCCCGTTCCCAGGGAGAGGCCAGTAATCCCAGCACTTTaGGAGACCGAAGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: EVDGSRVCCGQPVPRERPVIPAL*ETEVGG
Trigger: TCCGCCCACTTCGGTCTCCCAAAGTGCTGGGATTAC...TGGCCTCTCCCTGGGAACGGGCTGACCACAACACACCCTGCTGCCATCCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CGGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCGGTTCAAGAGCATTTaGGGGCCAGGCGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: RRQKLGGRKSSSLLSAQRRFKSI*GPGAVA
Trigger: AGCCACGGCGCCTGGCCCCCAAATGCTCTTGAACCG...CCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGGGGAGCATCTCCCATCCCTaGGTTTCCGGTTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: APFPCRSRVSVASRKAQGSISHP*VSGSRA
Trigger: TGCTCTTGAACCGGAAACCCAGGGATGGGAGATGCT...CCCCTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCTGTTCTCCCGCTTCCGTTTGGTTCTCCGCCCCGAGGGAGAGCTGAGGAAGGCTACAGTTCCAACGCTTaGGTTCTCACCCCGACCACA +
Preference number: 4 (lower is better)
Translates to: AVLPLPFGSPPRGRAEEGYSSNA*VLTPTT
Trigger: TGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTA...GCCTTCCTCAGCTCTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CTGCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTACAGTTCCAACGCTTaGGTTCTCACCCCGACCACA +
Preference number: 4 (lower is better)
Translates to: LQLGSARTRPPTALLFCLYSSNA*VLTPTT
Trigger: TGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTA...GAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGCGGCAAAACCAGGTCCTTCAGCTaGGAGTGTACAGCTCGGACG +
Preference number: 4 (lower is better)
Translates to: LCSHPSPPAPSVHIHCGKTRSFS*ECTART
Trigger: CGTCCGAGCTGTACACTCCCAGCTGAAGGACCTGGT...TTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397066.9
CDS-3UTR CCA 90 bp TTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGACGGCCACAGCTCCTaGAAGCTGGCACATGCCCAC +
Preference number: 4 (lower is better)
Translates to: FLCYAPTLRLQPPQYTSTDGHSS*KLAHAH
Trigger: GTGGGCATGTGCCAGCTTCCAGGAGCTGTGGCCGTC...AGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397066.9
CDS-3UTR TCA 90 bp CTTCACCCTCATTTCAACATTCTGATGGCTTGCACGGGACTCCCGCGGAGACAGAGTACCCTGAGGTCGTaGCGTCCTTCCCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LHPHFNILMACTGLPRRQSTLRS*RPSLAP
Trigger: GGGAGCCAGGGAAGGACGTCACGACCTCAGGGTACT...CTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CATCTCCCATCCCTGGGTTTCCGGTTCAAGAGCATTTGGGGGCCAGGCGCCGTGCTGCGGCAAATGTGCTaGCACACTTACAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: HLPSLGFRFKSIWGPGAVLRQMC*HTYSLT
Trigger: TGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGCAG...CACGGCGCCTGGCCCCCAAATGCTCTTGAACCGGAAACCCAGGGATGGGAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGCCAAAGAGAGGGATCTaGGCTCTTCACCCTCATTTC +
Preference number: 4 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGPKRGI*ALHPHF
Trigger: GAAATGAGGGTGAAGAGCTCAGATCCCTCTCTTTGG...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGCGGCAAAGCCTGGCCAACATGGTaGAATCCCGTCTCTACCGAA +
Preference number: 4 (lower is better)
Translates to: LCSHPSPPAPSVHIHCGKAWPTW*NPVSTE
Trigger: TTCGGTAGAGACGGGATTTCACCATGTTGGCCAGGC...TTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCCTCACAACACCCCTGTaGGGTAGGTATCATTGCCCC +
Preference number: 4 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFLTTPL*GRYHCP
Trigger: GGGGCAATGATACCTACCTCACAGGGGTGTTGTGAG...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp AGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACAGGCCATTCACTTCTaGGCGGGCCTCATCAGACAC +
Preference number: 4 (lower is better)
Translates to: RLTHAQGHTVDRTGLQFQQAIHF*AGLIRH
Trigger: GTGTCTGATGAGGCCCGCGCAGAAGTGAATGGCCTG...TTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CTTCACCCTCATTTCAACATTCTGATGGCTTGCACGGGACTCCCGCGGAGACAGCGTGAACCACGGCCTTaGAGCAGCTTCCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: LHPHFNILMACTGLPRRQREPRP*SSFRSP
Trigger: CGGTGAGCGGAAGCTGCTGCAAGGCCGTGGTTCACG...CTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GGCACCAGCCTCCTCCGCAGGTACCGGTCCACACACTCCACGGTCAGGTGCAGGTCATTGAGTCCCTTCTaGACGGAGAAGACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GTSLLRRYRSTHSTVRCRSLSPF*TEKTCC
Trigger: ACAACAAGTCTTCTCCGTGCAGAAGGGACTCAATGA...CCTGCACCTGACCGTGGAGTGTGTGGACCGGTACCTGCGGAGGAGGCTGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp CACAGGTGCTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGAGGAAGCTGCACAGGTaGTGGGTTCTCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: HRCWVLSSTGTSVSRTSLRKLHR*WVLSST
Trigger: TGTGGAGCTGAGAACCCAGCACCTGTGCAGCTTCCT...CAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGCACCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR GCA 90 bp GCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGGGGCACAGTGTGGCCAACTaGTTCCAGGCTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: APFPCRSRVSVASRKAQGHSVAN*FQAKLS
Trigger: GGAAAGTTTAGCCTGGAAGCAGTTGGCCACACTGTG...CCCCTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp AGAGCTCTAAAACGAGTCACGTGTCGTAGGGAGTGGGCCTGTGGCCAAGGCAGTCCCCCACAGCAGAGCTaGAGTTGGGATCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RALKRVTCRREWACGQGSPPQQS*SWDQPG
Trigger: TCCTGGCTGATCCCAACTGCAGCTCTGCTGTGGGGG...ACTGCCTTGGCCACAGGCCCACTCCCTACGACACGTGACTCGTTTTAGAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CAGGCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGAGAGGAGGTAGGAGCTaGTCAGACATCCCTGATGAG +
Preference number: 4 (lower is better)
Translates to: QAPFPCRSRVSVASRKAQRGGRS*SDIPDE
Trigger: CTCATCAGGGATGTCTGACCAGCTCCTACCTCCTCT...CTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CGCCATCTGTGGGTCACATACGAACGCCTCTGGGACAGAGCTCTAAAACGAGTCGGTCCCACAGCTGAGTaGTCCAGGGCTGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RHLWVTYERLWDRALKRVGPTAE*SRAVSA
Trigger: GGCAGACACAGCCCTGGACCACTCAGCTGTGGGACC...GACTCGTTTTAGAGCTCTGTCCCAGAGGCGTTCGTATGTGACCCACAGATGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCTGTTCTCCCGCTTCCGTTTGGTTCTCCGCCCCGAGGGAGAGCTGAGGAAGGCTGGAAGCACTTCTTATaGAGGCTCAAGACGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AVLPLPFGSPPRGRAEEGWKHFL*RLKTQG
Trigger: TCCCTGCGTCTTGAGCCTCCATAAGAAGTGCTTCCA...GCCTTCCTCAGCTCTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp GAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCATGAGTGCCTGTGGGTCCTaGGGTCCCTTGTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ETWWPQVILSALCAKASMSACGS*GPLSSG
Trigger: TCCAGAGGACAAGGGACCCCAGGACCCACAGGCACT...CATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AGAGCTCTAAAACGAGTCACGTGTCGTAGGGAGTGGGCCTGTGGCCAAGGCAGTCGCTTCACCTGTTGCTaGGGAACACTGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RALKRVTCRREWACGQGSRFTCC*GTLLSG
Trigger: CCCGGAGAGCAGTGTTCCCCAGCAACAGGTGAAGCG...ACTGCCTTGGCCACAGGCCCACTCCCTACGACACGTGACTCGTTTTAGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CCACGGAGGGCGGATGAAGAGCCAGATGAAAGGTGCGGCACCCACATTCAGCCGGCGCAAAGGCCTCCATaGTCTATGCAGCGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: PRRADEEPDERCGTHIQPAQRPP*SMQRSY
Trigger: ATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGC...CGGCTGAATGTGGGTGCCGCACCTTTCATCTGGCTCTTCATCCGCCCTCCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CAGGCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGGCGCAAAGGCCTCCATaGTCTATGCAGCGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: QAPFPCRSRVSVASRKAQAQRPP*SMQRSY
Trigger: ATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGC...CTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AAGGAAGTGGGTGCCCCATGCAGGCCGAGGTGGATGAGGGGACAGTGGTGTGCTACACCAGGACACACATaGGCTGAAGCTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KEVGAPCRPRWMRGQWCATPGHT*AEASRD
Trigger: GTCTCTGGAAGCTTCAGCCCATGTGTGTCCTGGTGT...AGCACACCACTGTCCCCTCATCCACCTCGGCCTGCATGGGGCACCCACTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACACCTCTGGGGGACACTTCTaGCCAAGTGGTTCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: KRESCQLPARGSGGAGNTSGGHF*PSGSFL
Trigger: TAAGAAAGAACCACTTGGCCAGAAGTGTCCCCCAGA...GGTGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CTCTTTACTGATAAACCGGGTGCAGATGACCATGCAGGCGATGCCCAGCAGCTGCGGTTCAAGAGCATTTaGGGGCCAGGCGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LFTDKPGADDHAGDAQQLRFKSI*GPGAVA
Trigger: AGCCACGGCGCCTGGCCCCCAAATGCTCTTGAACCG...CAGCTGCTGGGCATCGCCTGCATGGTCATCTGCACCCGGTTTATCAGTAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp ACGGGGCTCTGGTGGGGCTGGGAACACCAGGACACACATGGGCTGAAGCTTCCAAGCCATTTCAGGATGTaGAAGAGCACATCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: TGLWWGWEHQDTHGLKLPSHFRM*KSTSSG
Trigger: CCCCGAAGATGTGCTCTTTCACATCCTGAAATGGCT...TGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp AGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAAACAGCCTGGGAAGCCTaGAATAGCTGGCAGACGATC +
Preference number: 4 (lower is better)
Translates to: RLTHAQGHTVDRTGLQFQTAWEA*NSWQTI
Trigger: GATCGTCTGCCAGCTATTTCAGGCTTCCCAGGCTGT...TTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGGCAGGCACAGGCTTGTaGAGTCCTTCATGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SYAMLPPFASSPLSTHPLAGTGL*SPSWWQ
Trigger: TTGCCACCATGAAGGACTTCACAAGCCTGTGCCTGC...CAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCATGTGTAAGTGTTGTCCGTaGGCCATACGGCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: ETWWPQVILSALCAKASMCKCCP*AIRPPG
Trigger: TCCGGGAGGCCGTATGGCTCACGGACAACACTTACA...CATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CGGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCATAGGAGAATCCGGTaGGGTCCCACAGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: RRQKLGGRKSSSLLSAQRHRRIR*GPTAEW
Trigger: CCACTCAGCTGTGGGACCTCACCGGATTCTCCTATG...CCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCAGTGGGCGGATCACTTaGGGTCATGAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFSGRIT*GHEFET
Trigger: AGTCTCGAACTCATGACCTCAAGTGATCCGCCCACT...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CTCTTTACTGATAAACCGGGTGCAGATGACCATGCAGGCGATGCCCAGCAGCTGCTGCAGCTGGCACTCTaGCCTGAGGCTCTCGTGAAC +
Preference number: 4 (lower is better)
Translates to: LFTDKPGADDHAGDAQQLLQLAL*PEALVN
Trigger: GTTCACGAGAGCCTCAGGGCAGAGTGCCAGCTGCAG...CAGCTGCTGGGCATCGCCTGCATGGTCATCTGCACCCGGTTTATCAGTAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp TCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGAACAGGTCATGGGCCTaGTGCTGCTTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SYAMLPPFASSPLSTHPLNRSWA*CCFSSS
Trigger: GGATGAGGAGAAGCAGCAGCAGGCCCATGACCTGTT...CAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GCTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACACTCCACGGTCAGGTaGAGGCACAGGCTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGFSAPQGLASAGPPCNPHSTVR*RHRLVK
Trigger: CTTCACAAGCCTGTGCCTGCACCTGACCGTGGAGTG...TGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCAGGGTGTGTTGTGGTCAGCCCGTTCCCAGGGAGAGGCCATACCCAGGTCACACGTaGCTTAAGCGTGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: EVDGSRVCCGQPVPRERPYPGHT*LKRESC
Trigger: ACAGCTTTCACGCTTAAGGCACGTGTGACCTGGGTA...TGGCCTCTCCCTGGGAACGGGCTGACCACAACACACCCTGCTGCCATCCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GCGGCAAATGTGCTGACACACTTACAGCCTCACAAGGCCCAGGTTCATGTCCTCCCCCCACAGCAGAGCTaGAGTTGGGATCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AANVLTHLQPHKAQVHVLPPQQS*SWDQPG
Trigger: TCCTGGCTGATCCCAACTGCAGCTCTGCTGTGGGGG...GAGGACATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp AGAGCTCTAAAACGAGTCACGTGTCGTAGGGAGTGGGCCTGTGGCCAAGGCAGTCAGGCTCCCTTTCCATaGAGGAGCAGAGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RALKRVTCRREWACGQGSQAPFP*RSRVSV
Trigger: CACGGAGACTCTGCTCCTGCATGGAAAGGGAGCCTG...ACTGCCTTGGCCACAGGCCCACTCCCTACGACACGTGACTCGTTTTAGAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCTGGAAGCTGGCACATaGCCACACACTGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: DRNLVAASHPLCSLRKGLLEAGT*PHTGVV
Trigger: AACCACGCCAGTGTGTGGGCATGTGCCAGCTTCCAG...GAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397066.9
CDS-3UTR CCA 90 bp GGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCAGAGGAGGTAGGAGCTaGTCAGACATCCCTGATGAG +
Preference number: 4 (lower is better)
Translates to: GLKLPETVRHGRDREVPSRGGRS*SDIPDE
Trigger: CTCATCAGGGATGTCTGACCAGCTCCTACCTCCTCT...GGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp TTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACAACCTCCAGTCCAAGCTaGTTTGCATTTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LSVKAVSSRHGALVGLGTTSSPS*FAFAQA
Trigger: AGCCTGTGCAAATGCAAACCAGCTTGGACTGGAGGT...TGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGTGTAATCCACCACAGTaGGGACTCGAATCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGCNPPQ*GLESSL
Trigger: AAGGGAAGATTCGAGTCCCCACTGTGGTGGATTACA...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp TTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTAAGCTGCACAGGTGCTaGGTTCTCAGCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: FLCYAPTLRLQPPQYTSTKLHRC*VLSSTG
Trigger: CCCTGTGGAGCTGAGAACCCAGCACCTGTGCAGCTT...AGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGTCACACGTGCCTTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTTGGAAGCACTTCTTATaGAGGCTCAAGACGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GHTCLKRESCQLPARGSGWKHFL*RLKTQG
Trigger: TCCCTGCGTCTTGAGCCTCCATAAGAAGTGCTTCCA...ACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAAGGCACGTGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCGGCAAATGTGCTGACACACTTACAGCCTCACAAGGCCCAGGTTCATGTCCTCGAGCTGAGGAAGGCGTaGATCTCCCCTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AANVLTHLQPHKAQVHVLELRKA*ISPVLR
Trigger: CCTCAGCACAGGGGAGATCCACGCCTTCCTCAGCTC...GAGGACATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CTCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTATGCGAGCTGAGGAAGGCGTaGATCTCCCCTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LCSLRKGLHGLCSVPMLCELRKA*ISPVLR
Trigger: CCTCAGCACAGGGGAGATCCACGCCTTCCTCAGCTC...GCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCACACAGTGTCTGCCTCTGTCTTCCTaGAGGCTGTTCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: LPETVRHGRDREVPSTQCLPLSS*RLFSRF
Trigger: GAAGCGGGAGAACAGCCTCCAGGAAGACAGAGGCAG...ACACTGTGTGGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGGCAGCAATGCTGTTCTaGGTTCAGGTAGACCACGGT +
Preference number: 4 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPAAMLF*VQVDHG
Trigger: ACCGTGGTCTACCTGAACCCAGAACAGCATTGCTGC...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCAGGGTGTGTTGTGGTCAGCCCGTTCCCAGGGAGAGGCCAAAGCCTCCTCATCACTaGATTCCTGGCAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: EVDGSRVCCGQPVPRERPKPPHH*IPGSNA
Trigger: AGCATTGCTGCCAGGAATCCAGTGATGAGGAGGCTT...TGGCCTCTCCCTGGGAACGGGCTGACCACAACACACCCTGCTGCCATCCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CTTCACCCTCATTTCAACATTCTGATGGCTTGCACGGGACTCCCGCGGAGACAGCGCTTCACCTGTTGCTaGGGAACACTGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LHPHFNILMACTGLPRRQRFTCC*GTLLSG
Trigger: CCCGGAGAGCAGTGTTCCCCAGCAACAGGTGAAGCG...CTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CTCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTATGCGGGCTCTGGTGGGGCTaGGAACACCAGGACACACAT +
Preference number: 4 (lower is better)
Translates to: LCSLRKGLHGLCSVPMLCGLWWG*EHQDTH
Trigger: ATGTGTGTCCTGGTGTTCCCAGCCCCACCAGAGCCC...GCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AACCAGCAGATGTGGGCAGGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGTGGATGAGGGGACAGTaGTGTGCTCACAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: NQQMWAGAQVVSDYPGHTWMRGQ*CAHSCQ
Trigger: CTGACAGCTGTGAGCACACCACTGTCCCCTCATCCA...CGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTGCCCACATCTGCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGAACACCAGGACACACATGGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGCCATGCAGGCCGAGGTaGATGAGGGGACAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GTPGHTWAEASRDSETRKPCRPR*MRGQWC
Trigger: ACACCACTGTCCCCTCATCCACCTCGGCCTGCATGG...CTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCTGTTCTCCCGCTTCCGTTTGGTTCTCCGCCCCGAGGGAGAGCTGAGGAAGGCACATACGAACGCCTCTaGGACAGAGCTCTAAAACGA +
Preference number: 4 (lower is better)
Translates to: AVLPLPFGSPPRGRAEEGTYERL*DRALKR
Trigger: TCGTTTTAGAGCTCTGTCCCAGAGGCGTTCGTATGT...GCCTTCCTCAGCTCTCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGTGCTCTTCTGCCTCTTaGTCACCTCAGATGTTACAG +
Preference number: 4 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGCSSAS*SPQMLQ
Trigger: CTGTAACATCTGAGGTGACCAAGAGGCAGAAGAGCA...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCATGACAGCTCCTGGAAGCTaGCACATGCCCACACACTGG +
Preference number: 4 (lower is better)
Translates to: ETWWPQVILSALCAKASMTAPGS*HMPTHW
Trigger: CCAGTGTGTGGGCATGTGCCAGCTTCCAGGAGCTGT...CATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397066.9
3UTR CAA 72 bp GTCCTCAAACCGCTGCTTCACGGCGGTCAGAGAGACTaGCCTGTAGTCCTTGGGGGCGTCATCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VLKPLLHGGQRD*PVVLGGVIMEA
Trigger: TGCTTCCATGATGACGCCCCCAAGGACTACAGGCAAGTCTCTCTGACCGCCGTGAAGCAGCGGTTTGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CAA 72 bp AGGCAGGAGTATCCGGGAGGCGGAGGTTACAGTGAGTaGAGAGTTGAGATCATGCCACTGCACTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RQEYPGGGGYSE*RVEIMPLHSSR
Trigger: CCGGCTGGAGTGCAGTGGCATGATCTCAACTCTCAACTCACTGTAACCTCCGCCTCCCGGATACTCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCAATATGGATGCTTTGTaGGTCCTCTGCAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PRGTQSTGRVYSSNAWVLNMDAL*VLCSWH
Trigger: GTGCCAGCTGCAGAGGACTCACAAAGCATCCATATT...GAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp ACTGAAGCCCCAAACCAGCAGATGTGGGCAGGGGCTCAAGTGGTGTCTGACTACTGGCAGCGTAGTCCCTaGGTTTTCGGAAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TEAPNQQMWAGAQVVSDYWQRSP*VFGSCG
Trigger: TCCACAGCTTCCGAAAACTCAGGGACTACGCTGCCA...GTAGTCAGACACCACTTGAGCCCCTGCCCACATCTGCTGGTTTGGGGCTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGGCACCTCTTCCTGGCTaGTTTCTCCATAGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: SYAMLPPFASSPLSTHPLAPLPG*FLHSAC
Trigger: ACAAGCGCTATGGAGAAATCAGCCAGGAAGAGGTGC...CAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCCTCATTTCAACATTCTaGTGGCTTGCACGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GLKLPETVRHGRDREVPSLISTF*WLARDS
Trigger: GGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAG...GGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGGAGAGGTGTTCACATTaGCGCCATCTGTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: SYAMLPPFASSPLSTHPLERCSH*RHLWVT
Trigger: TGTGACCCACAGATGGCGTCAATGTGAACACCTCTC...CAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGCGGCAAAGTGTCAGGATGGCATTaGGGGGCTGGAGTAAGATTT +
Preference number: 4 (lower is better)
Translates to: LCSHPSPPAPSVHIHCGKVSGWH*GAGVRF
Trigger: AAATCTTACTCCAGCCCCTCAATGCCATCCTGACAC...TTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GGACAAGCCTCCTCATCACTGGATTCCTGGCAGCAATGCTGTTCTGGGTTCAGGCAGCTGCCGCGGACATaGACACACATAGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GQASSSLDSWQQCCSGFRQLPRT*THIAPA
Trigger: TGCTGGTGCTATGTGTGTTCATGTCCGCGGCAGCTG...CCTGAACCCAGAACAGCATTGCTGCCAGGAATCCAGTGATGAGGAGGCTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp CTTCACCCTCATTTCAACATTCTGATGGCTTGCACGGGACTCCCGCGGAGACAGCAGGCCATTCACTTCTaGGCGGGCCTCATCAGACAC +
Preference number: 4 (lower is better)
Translates to: LHPHFNILMACTGLPRRQQAIHF*AGLIRH
Trigger: GTGTCTGATGAGGCCCGCGCAGAAGTGAATGGCCTG...CTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCCAGTCCAAGCTGGTTTaGATTTGCACAGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFQSKLV*ICTGFG
Trigger: GCCAAAGCCTGTGCAAATGCAAACCAGCTTGGACTG...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCAGGAAGCTGCACAGGTaGTGGGTTCTCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: DRNLVAASHPLCSLRKGLRKLHR*WVLSST
Trigger: TGTGGAGCTGAGAACCCAGCACCTGTGCAGCTTCCT...GAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp AGAGCTCTAAAACGAGTCACGTGTCGTAGGGAGTGGGCCTGTGGCCAAGGCAGTAGCGTTCCTATGCTATaGTCCCACCCTTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RALKRVTCRREWACGQGSSVPML*SHPSPP
Trigger: TGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCT...ACTGCCTTGGCCACAGGCCCACTCCCTACGACACGTGACTCGTTTTAGAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCACACAGTGTATCCTCTCTGCTCTCTaGGCAAAGGCCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LPETVRHGRDREVPSTQCILSAL*AKASMV
Trigger: GACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGAT...ACACTGTGTGGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CACAGGTGCTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGACTGCTCTGCTCTTCTaGCTCTTGGTCACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: HRCWVLSSTGTSVSRTSLTALLF*LLVTSD
Trigger: ATCTGAGGTGACCAAGAGGCAGAAGAGCAGAGCAGT...CAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGCACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp CTCTTTACTGATAAACCGGGTGCAGATGACCATGCAGGCGATGCCCAGCAGCTGACTGAGGCTCACACATaGCCAGGGGCACACAGTCGA +
Preference number: 4 (lower is better)
Translates to: LFTDKPGADDHAGDAQQLTEAHT*PGAHSR
Trigger: TCGACTGTGTGCCCCTGGGCATGTGTGAGCCTCAGT...CAGCTGCTGGGCATCGCCTGCATGGTCATCTGCACCCGGTTTATCAGTAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CCGTCCACGGAGCTTGTGGGACTTGCGGTGCTGACGGAGGAGTACCCTGAGGTCCCAAGCAGTGCAATATaGATGCTTTGTGAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PSTELVGLAVLTEEYPEVPSSAI*MLCESS
Trigger: AGAGGACTCACAAAGCATCCATATTGCACTGCTTGG...GACCTCAGGGTACTCCTCCGTCAGCACCGCAAGTCCCACAAGCTCCGTGGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp GAAACTGAGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAAGTTTTCGGAAGCTGTaGAGGCATCGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ETEAHTCPGAHSRQDGSTSFRKL*RHRPGS
Trigger: AGATCCTGGGCGATGCCTCCACAGCTTCCGAAAACT...TGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCTCAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCCCTCACTCTCCTGGTCGCCTTCATAGCCAGAGCAGCAGTCCAGGCTCCAGTCCATTTGCACAGGCTTTaGCTAAAGACAGCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: ALTLLVAFIARAAVQAPVHLHRL*LKTAAL
Trigger: AAGCGCAGCTGTCTTTAGCCAAAGCCTGTGCAAATG...GACTGGAGCCTGGACTGCTGCTCTGGCTATGAAGGCGACCAGGAGAGTGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CCTCCACACAGTGTGGCCAACTGCTTCCAGGCTAAACTTTCCAAAGAGAGGGATAGCACTGAGGTAGGTTaGGGCAGGGCCCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: PPHSVANCFQAKLSKERDSTEVG*GRAPKP
Trigger: TGGCTTGGGGGCCCTGCCCCAACCTACCTCAGTGCT...ATCCCTCTCTTTGGAAAGTTTAGCCTGGAAGCAGTTGGCCACACTGTGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AGGCGGAGACGATCTCGCCCATCATTCTCACCAGGTCCTCGTACTTGTAAGTGTACGTGTCGTAGGGAGTaGGCCTGTGGCCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RRRRSRPSFSPGPRTCKCTCRRE*ACGQGS
Trigger: ACTGCCTTGGCCACAGGCCCACTCCCTACGACACGT...ACACTTACAAGTACGAGGACCTGGTGAGAATGATGGGCGAGATCGTCTCCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCAGGGTGTGTTGTGGTCAGCCCGTTCCCAGGGAGAGGCCATGCTCTTCTGCCTCTTaGTCACCTCAGATGTTACAG +
Preference number: 4 (lower is better)
Translates to: EVDGSRVCCGQPVPRERPCSSAS*SPQMLQ
Trigger: CTGTAACATCTGAGGTGACCAAGAGGCAGAAGAGCA...TGGCCTCTCCCTGGGAACGGGCTGACCACAACACACCCTGCTGCCATCCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGAACACCAGGACACACATGGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGCACATGCCCACACACTaGCGTGGTTGTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GTPGHTWAEASRDSETRKHMPTH*RGCPPG
Trigger: ACCTGGTGGACAACCACGCCAGTGTGTGGGCATGTG...CTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397066.9
CDS-3UTR CCA 90 bp GCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGTGGGGATGGCCTCCTGCTCCATaGTCGAATCTTCCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: APQGLASAGPPCNPPQWGWPPAP*SNLPFQ
Trigger: TTGGAAGGGAAGATTCGACCATGGAGCAGGAGGCCA...TCCCCACTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR TCA 90 bp GACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCGCACCTCTTCCTGGCTaGTTTCTCCATAGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: DRNLVAASHPLCSLRKGLAPLPG*FLHSAC
Trigger: ACAAGCGCTATGGAGAAATCAGCCAGGAAGAGGTGC...GAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTAGTGGGCGGATCACTTaGGGTCATGAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: FLCYAPTLRLQPPQYTSTSGRIT*GHEFET
Trigger: AGTCTCGAACTCATGACCTCAAGTGATCCGCCCACT...AGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CACAGGTGCTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGGCAGTGCAATATGGATaGTTTGTGAGTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HRCWVLSSTGTSVSRTSLAVQYG*FVSPLQ
Trigger: CTGCAGAGGACTCACAAAGCATCCATATTGCACTGC...CAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGCACCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp AGGCGGAGACGATCTCGCCCATCATTCTCACCAGGTCCTCGTACTTGTAAGTGTGGAGCTTGTGGGACTTaGGGTGCTGACGGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: RRRRSRPSFSPGPRTCKCGACGT*GADGGV
Trigger: TACTCCTCCGTCAGCACCGCAAGTCCCACAAGCTCC...ACACTTACAAGTACGAGGACCTGGTGAGAATGATGGGCGAGATCGTCTCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp CTCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTATGCATCCGCTTCACCTGTTaGTGGGGAACACTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LCSLRKGLHGLCSVPMLCIRFTC*WGTLLS
Trigger: GGAGAGCAGTGTTCCCCAGCAACAGGTGAAGCGGAT...GCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp AAGGAAGTGGGTGCCCCATGCAGGCCGAGGTGGATGAGGGGACAGTGGTGTGCTCCTCCTCACTGTGTATaGATAGGTTTATCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: KEVGAPCRPRWMRGQWCAPPHCV*IGLSAS
Trigger: TGAAGCGGATAAACCTATGCATACACAGTGAGGAGG...AGCACACCACTGTCCCCTCATCCACCTCGGCCTGCATGGGGCACCCACTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GGTCTATGCAGCGTTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCATCAGTACACATCCACTaGGGCAAATGTGCTGACACA +
Preference number: 4 (lower is better)
Translates to: GLCSVPMLCSHPSPPAPSSVHIH*GKCADT
Trigger: TGTGTCAGCACATTTGCCGCAGTGGATGTGTACTGA...TGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp TTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGGCCTCCATGGTCTATaGAGCGTTCCTATGCTATGC +
Preference number: 4 (lower is better)
Translates to: FLCYAPTLRLQPPQYTSTGLHGL*SVPMLC
Trigger: GCATAGCATAGGAACGCTGCATAGACCATGGAGGCC...AGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CTTCACCCTCATTTCAACATTCTGATGGCTTGCACGGGACTCCCGCGGAGACAGTTGAGATCATGCCACTaGACTCCAGCCGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: LHPHFNILMACTGLPRRQLRSCH*TPAGET
Trigger: TGTCTCCCCGGCTGGAGTGCAGTGGCATGATCTCAA...CTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTTGATAACAGAAACACTTaGCACACCTACAGTGGACCA +
Preference number: 4 (lower is better)
Translates to: AVGISQDTAPDCSALLPLDNRNT*HTYSGP
Trigger: TGGTCCACTGTAGGTGTGCCAAGTGTTTCTGTTATC...AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGACAAGCCTCCTCATCACTGGATTCCTGGCAGCAATGCTGTTCTGGGTTCAGGCTTGCCTGTAGTCCTTaGGGGCGTCATCATGGAAGC +
Preference number: 4 (lower is better)
Translates to: GQASSSLDSWQQCCSGFRLACSP*GRHHGS
Trigger: GCTTCCATGATGACGCCCCCAAGGACTACAGGCAAG...CCTGAACCCAGAACAGCATTGCTGCCAGGAATCCAGTGATGAGGAGGCTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CCTCCACACAGTGTGGCCAACTGCTTCCAGGCTAAACTTTCCAAAGAGAGGGATGGGCAGGGGCTCAAGTaGTGTCTGACTACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PPHSVANCFQAKLSKERDGQGLK*CLTTQV
Trigger: GACCTGGGTAGTCAGACACCACTTGAGCCCCTGCCC...ATCCCTCTCTTTGGAAAGTTTAGCCTGGAAGCAGTTGGCCACACTGTGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp GAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCATGAATATGGATGCTTTGTaGGTCCTCTGCAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ETWWPQVILSALCAKASMNMDAL*VLCSWH
Trigger: GTGCCAGCTGCAGAGGACTCACAAAGCATCCATATT...CATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp AGGCGGAGACGATCTCGCCCATCATTCTCACCAGGTCCTCGTACTTGTAAGTGTGCAGGCACAGGCTTGTaGAGTCCTTCATGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RRRRSRPSFSPGPRTCKCAGTGL*SPSWWQ
Trigger: TTGCCACCATGAAGGACTTCACAAGCCTGTGCCTGC...ACACTTACAAGTACGAGGACCTGGTGAGAATGATGGGCGAGATCGTCTCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp CTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCACACAGTGTACAGACTCAGCACTCTaGCCAAGCAGTGCAATATGG +
Preference number: 4 (lower is better)
Translates to: LPETVRHGRDREVPSTQCTDSAL*PSSAIW
Trigger: CCATATTGCACTGCTTGGGCAGAGTGCTGAGTCTGT...ACACTGTGTGGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CGGAGACAGAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCAGTCCAAGCTGGTTTaGATTTGCACAGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RRQKLGGRKSSSLLSAQRQSKLV*ICTGFG
Trigger: GCCAAAGCCTGTGCAAATGCAAACCAGCTTGGACTG...CCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CAGGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGTGCCTTAAGCGTGAAATATGCAGCGTTCCTATaGTATGCTCCCACCCTTCGC +
Preference number: 4 (lower is better)
Translates to: QGLKWCLTTQVTRALSVKYAAFL*YAPTLR
Trigger: GCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATA...TTTCACGCTTAAGGCACGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CTCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTATGCGGCCTCCATGGTCTATaGAGCGTTCCTATGCTATGC +
Preference number: 4 (lower is better)
Translates to: LCSLRKGLHGLCSVPMLCGLHGL*SVPMLC
Trigger: GCATAGCATAGGAACGCTGCATAGACCATGGAGGCC...GCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CAGCACTCTGCCCAAGCAGTGCAATATGGATGCTTTGTGAGTCCTCTGCAGCTGATCCTCTCTGCTCTCTaGGCAAAGGCCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: QHSAQAVQYGCFVSPLQLILSAL*AKASMV
Trigger: GACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGAT...CAGCTGCAGAGGACTCACAAAGCATCCATATTGCACTGCTTGGGCAGAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp TTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTCACAGTGTGGCCAACTaGTTCCAGGCTAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: FLCYAPTLRLQPPQYTSTHSVAN*FQAKLS
Trigger: GGAAAGTTTAGCCTGGAAGCAGTTGGCCACACTGTG...AGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp TTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTTACCCAGGTCACACGTaGCTTAAGCGTGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: FLCYAPTLRLQPPQYTSTYPGHT*LKRESC
Trigger: ACAGCTTTCACGCTTAAGGCACGTGTGACCTGGGTA...AGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp AGAGCTCTAAAACGAGTCACGTGTCGTAGGGAGTGGGCCTGTGGCCAAGGCAGTACTGCTCTGCTCTTCTaGCTCTTGGTCACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RALKRVTCRREWACGQGSTALLF*LLVTSD
Trigger: ATCTGAGGTGACCAAGAGGCAGAAGAGCAGAGCAGT...ACTGCCTTGGCCACAGGCCCACTCCCTACGACACGTGACTCGTTTTAGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGCGGCAAACCAAGCAGTGCAATATaGATGCTTTGTGAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LCSHPSPPAPSVHIHCGKPSSAI*MLCESS
Trigger: AGAGGACTCACAAAGCATCCATATTGCACTGCTTGG...TTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CAGGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGTGCCTTAAGCGTGAAAAGTTTTCGGAAGCTGTaGAGGCATCGCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: QGLKWCLTTQVTRALSVKSFRKL*RHRPGS
Trigger: AGATCCTGGGCGATGCCTCCACAGCTTCCGAAAACT...TTTCACGCTTAAGGCACGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp ACTGAAGCCCCAAACCAGCAGATGTGGGCAGGGGCTCAAGTGGTGTCTGACTACACCTCCAGTCCAAGCTaGTTTGCATTTGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: TEAPNQQMWAGAQVVSDYTSSPS*FAFAQA
Trigger: AGCCTGTGCAAATGCAAACCAGCTTGGACTGGAGGT...GTAGTCAGACACCACTTGAGCCCCTGCCCACATCTGCTGGTTTGGGGCTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AACCAGCAGATGTGGGCAGGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGTGTAATCCACCACAGTaGGGACTCGAATCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: NQQMWAGAQVVSDYPGHTCNPPQ*GLESSL
Trigger: AAGGGAAGATTCGAGTCCCCACTGTGGTGGATTACA...CGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTGCCCACATCTGCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp TTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTTTGGGGGCGTCATCATaGAAGCACTTCTTATGGAGG +
Preference number: 4 (lower is better)
Translates to: FLCYAPTLRLQPPQYTSTLGASS*KHFLWR
Trigger: CCTCCATAAGAAGTGCTTCCATGATGACGCCCCCAA...AGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp TTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACAAATACAAAAATTAGCTaGGCGTGGTTGGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LSVKAVSSRHGALVGLGTNTKIS*AWLGAC
Trigger: ACAAGCACCCAACCACGCCCAGCTAATTTTTGTATT...TGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AGGCGGAGACGATCTCGCCCATCATTCTCACCAGGTCCTCGTACTTGTAAGTGTGTAATCCCAGCACTTTaGGAGACCGAAGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: RRRRSRPSFSPGPRTCKCVIPAL*ETEVGG
Trigger: TCCGCCCACTTCGGTCTCCCAAAGTGCTGGGATTAC...ACACTTACAAGTACGAGGACCTGGTGAGAATGATGGGCGAGATCGTCTCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp TTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGAGCATCTCCCATCCCTaGGTTTCCGGTTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FSAPQGLASAGPPCNPPQSISHP*VSGSRA
Trigger: TGCTCTTGAACCGGAAACCCAGGGATGGGAGATGCT...CTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
3UTR CAA 72 bp CTGAGCTCTTCACCCTCATTTCAACATTCTGATGGCTaGCACGGGACTCCCGCGGAGACAGAAACTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSSSPSFQHSDG*HGTPAETETWW
Trigger: CCACCAAGTTTCTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAGAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp CTCCAGCCCCCTCAGTACACATCCACTGCGGCAAATGTGCTGACACACTTACAGAGCCATTTCAGGATGTaGAAGAGCACATCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: LQPPQYTSTAANVLTHLQSHFRM*KSTSSG
Trigger: CCCCGAAGATGTGCTCTTTCACATCCTGAAATGGCT...CTGTAAGTGTGTCAGCACATTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp GCTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCAAGACTTGTTGTTTACTaGCAGCCTGGGAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: AGFSAPQGLASAGPPCNPRLVVY*QPGKPE
Trigger: TTCAGGCTTCCCAGGCTGTCAGTAAACAACAAGTCT...TGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR TCA 90 bp AAAGAATGGCCCAGAAATTCAGCACAAAGAGAGGTGTTCACATTGACGCCATCTGTCCAGGGACAGCACTaGGGTAGGTTGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KEWPRNSAQREVFTLTPSVQGQH*GRLGQG
Trigger: GCCCTGCCCCAACCTACCTCAGTGCTGTCCCTGGAC...AGATGGCGTCAATGTGAACACCTCTCTTTGTGCTGAATTTCTGGGCCATTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp AGGCGGAGACGATCTCGCCCATCATTCTCACCAGGTCCTCGTACTTGTAAGTGTCTGCGGCAAATGTGCTaGCACACTTACAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: RRRRSRPSFSPGPRTCKCLRQMC*HTYSLT
Trigger: TGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGCAG...ACACTTACAAGTACGAGGACCTGGTGAGAATGATGGGCGAGATCGTCTCCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp GCGGCAAATGTGCTGACACACTTACAGCCTCACAAGGCCCAGGTTCATGTCCTCCCAAAGAGAGGGATCTaGGCTCTTCACCCTCATTTC +
Preference number: 4 (lower is better)
Translates to: AANVLTHLQPHKAQVHVLPKRGI*ALHPHF
Trigger: GAAATGAGGGTGAAGAGCTCAGATCCCTCTCTTTGG...GAGGACATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp CCTCCACACAGTGTGGCCAACTGCTTCCAGGCTAAACTTTCCAAAGAGAGGGATAACAGGTCATGGGCCTaGTGCTGCTTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: PPHSVANCFQAKLSKERDNRSWA*CCFSSS
Trigger: GGATGAGGAGAAGCAGCAGCAGGCCCATGACCTGTT...ATCCCTCTCTTTGGAAAGTTTAGCCTGGAAGCAGTTGGCCACACTGTGTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp AGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACCTCCTCACTGTGTATaGATAGGTTTATCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: RLTHAQGHTVDRTGLQFQPPHCV*IGLSAS
Trigger: TGAAGCGGATAAACCTATGCATACACAGTGAGGAGG...TTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp CCTCCACACAGTGTGGCCAACTGCTTCCAGGCTAAACTTTCCAAAGAGAGGGATTTGAGATCATGCCACTaGACTCCAGCCGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: PPHSVANCFQAKLSKERDLRSCH*TPAGET
Trigger: TGTCTCCCCGGCTGGAGTGCAGTGGCATGATCTCAA...ATCCCTCTCTTTGGAAAGTTTAGCCTGGAAGCAGTTGGCCACACTGTGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp TTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTCATTTGCACAGGCTTTaGCTAAAGACAGCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: FLCYAPTLRLQPPQYTSTHLHRL*LKTAAL
Trigger: AAGCGCAGCTGTCTTTAGCCAAAGCCTGTGCAAATG...AGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CTCTTTACTGATAAACCGGGTGCAGATGACCATGCAGGCGATGCCCAGCAGCTGTTGGGGGCGTCATCATaGAAGCACTTCTTATGGAGG +
Preference number: 4 (lower is better)
Translates to: LFTDKPGADDHAGDAQQLLGASS*KHFLWR
Trigger: CCTCCATAAGAAGTGCTTCCATGATGACGCCCCCAA...CAGCTGCTGGGCATCGCCTGCATGGTCATCTGCACCCGGTTTATCAGTAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp CAGGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGTGCCTTAAGCGTGAAAAAGCCTCCTCATCACTaGATTCCTGGCAGCAATGCT +
Preference number: 4 (lower is better)
Translates to: QGLKWCLTTQVTRALSVKKPPHH*IPGSNA
Trigger: AGCATTGCTGCCAGGAATCCAGTGATGAGGAGGCTT...TTTCACGCTTAAGGCACGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AGAGCTCTAAAACGAGTCACGTGTCGTAGGGAGTGGGCCTGTGGCCAAGGCAGTACATACGAACGCCTCTaGGACAGAGCTCTAAAACGA +
Preference number: 4 (lower is better)
Translates to: RALKRVTCRREWACGQGSTYERL*DRALKR
Trigger: TCGTTTTAGAGCTCTGTCCCAGAGGCGTTCGTATGT...ACTGCCTTGGCCACAGGCCCACTCCCTACGACACGTGACTCGTTTTAGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGTCACACGTGCCTTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTAAGACAGGAAAAGAATaGCCCAGAAATTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: GHTCLKRESCQLPARGSGKTGKE*PRNSAQ
Trigger: TTGTGCTGAATTTCTGGGCCATTCTTTTCCTGTCTT...ACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAAGGCACGTGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GAAACTTGGTGGCCGCAAGTCATCCTCTCTGCTCTCTGCGCAAAGGCCTCCATGTCTGGGGGACACTTCTaGCCAAGTGGTTCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: ETWWPQVILSALCAKASMSGGHF*PSGSFL
Trigger: TAAGAAAGAACCACTTGGCCAGAAGTGTCCCCCAGA...CATGGAGGCCTTTGCGCAGAGAGCAGAGAGGATGACTTGCGGCCACCAAGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGTCTATGCAGCGTTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAAATACAAAAATTAGCTaGGCGTGGTTGGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GLCSVPMLCSHPSPPAPSNTKIS*AWLGAC
Trigger: ACAAGCACCCAACCACGCCCAGCTAATTTTTGTATT...TGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAACGCTGCATAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TCCTCTCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTTCAAGACGCAGGGAATaGGGTCTTCATAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: SSLLSAQRPPWSMQRSYASRRRE*GLHRRI
Trigger: GATTCTCCTATGAAGACCTCATTCCCTGCGTCTTGA...AGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp CACAGGTGCTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGAAGACAGGAAAAGAATaGCCCAGAAATTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: HRCWVLSSTGTSVSRTSLKTGKE*PRNSAQ
Trigger: TTGTGCTGAATTTCTGGGCCATTCTTTTCCTGTCTT...CAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGCACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR TCA 90 bp AGACTTGCCTGTAGTCCTTGGGGGCGTCATCATGGAAGCACTTCTTATGGAGGCTCAAGACGCAGGGAATaGGGTCTTCATAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: RLACSPWGRHHGSTSYGGSRRRE*GLHRRI
Trigger: GATTCTCCTATGAAGACCTCATTCCCTGCGTCTTGA...GCCTCCATAAGAAGTGCTTCCATGATGACGCCCCCAAGGACTACAGGCAAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR GCA 90 bp CTCTGCTCTCTGCGCAAAGGCCTCCATGGTCTATGCAGCGTTCCTATGCTATGCTCATTGAGTCCCTTCTaGACGGAGAAGACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LCSLRKGLHGLCSVPMLCSLSPF*TEKTCC
Trigger: ACAACAAGTCTTCTCCGTGCAGAAGGGACTCAATGA...GCATAGCATAGGAACGCTGCATAGACCATGGAGGCCTTTGCGCAGAGAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp TTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGTCATTGAGTCCCTTCTaGACGGAGAAGACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: FSAPQGLASAGPPCNPPQSLSPF*TEKTCC
Trigger: ACAACAAGTCTTCTCCGTGCAGAAGGGACTCAATGA...CTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR GCA 90 bp GCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTTGTTCTTTCTTACATTTaGAGAGTAAACAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: AVGISQDTAPDCSALLPLVLSYI*RVNRSG
Trigger: TCCACTTCTGTTTACTCTGCAAATGTAAGAAAGAAC...AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
3UTR CAA 72 bp TGGCCCAGAAATTCAGCACAAAGAGAGGTGTTCACATaGACGCCATCTGTGGGTCACATACGAACGCCTCTG +
Preference number: 4 (lower is better)
Translates to: WPRNSAQREVFT*TPSVGHIRTPL
Trigger: CAGAGGCGTTCGTATGTGACCCACAGATGGCGTCAATGTGAACACCTCTCTTTGTGCTGAATTTCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AAAGAATGGCCCAGAAATTCAGCACAAAGAGAGGTGTTCACATTGACGCCATCTAAGCTGCACAGGTGCTaGGTTCTCAGCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: KEWPRNSAQREVFTLTPSKLHRC*VLSSTG
Trigger: CCCTGTGGAGCTGAGAACCCAGCACCTGTGCAGCTT...AGATGGCGTCAATGTGAACACCTCTCTTTGTGCTGAATTTCTGGGCCATTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGCTGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCCGTAGGCGGACAGGCTaGTGTGCAGCAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GWSKIFVLQVNLNNGGNLRRRTG*CAAGRA
Trigger: AGCTCTCCCTGCTGCACACCAGCCTGTCCGCCTACG...GAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGTGGGGAGTTCTTTCTTACATTTaGAGAGTAAACAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: APQGLASAGPPCNPPQWGVLSYI*RVNRSG
Trigger: TCCACTTCTGTTTACTCTGCAAATGTAAGAAAGAAC...TCCCCACTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CCA 90 bp TGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCTTGCATCGAGGATGCCGCTaGGAGCTGTCACGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: WSKIFVLQVNLNNGGNLLHRGCR*ELSRRP
Trigger: AGGGCGACGTGACAGCTCCCAGCGGCATCCTCGATG...CAAGAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGCTGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCCCAAACCAGCAGATGTaGGCAGGGGCTCAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GWSKIFVLQVNLNNGGNLPNQQM*AGAQVV
Trigger: CACCACTTGAGCCCCTGCCCACATCTGCTGGTTTGG...GAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp GGCTGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCAACATTCTGATGGCTTaGACGGGACTCCCGCGGAGA +
Preference number: 4 (lower is better)
Translates to: GWSKIFVLQVNLNNGGNLNILMA*TGLPRR
Trigger: TCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTT...GAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp AAAGAATGGCCCAGAAATTCAGCACAAAGAGAGGTGTTCACATTGACGCCATCTGAGACAGAAACTTGGTaGCCGCAAGTCATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KEWPRNSAQREVFTLTPSETETW*PQVILS
Trigger: AGAGAGGATGACTTGCGGCCACCAAGTTTCTGTCTC...AGATGGCGTCAATGTGAACACCTCTCTTTGTGCTGAATTTCTGGGCCATTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR GCA 90 bp AAAGAATGGCCCAGAAATTCAGCACAAAGAGAGGTGTTCACATTGACGCCATCTGCAGTGCAATATGGATaGTTTGTGAGTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KEWPRNSAQREVFTLTPSAVQYG*FVSPLQ
Trigger: CTGCAGAGGACTCACAAAGCATCCATATTGCACTGC...AGATGGCGTCAATGTGAACACCTCTCTTTGTGCTGAATTTCTGGGCCATTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR TCA 90 bp TGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCTTGACAGCCTGGGAAGCCTaGAATAGCTGGCAGACGATC +
Preference number: 4 (lower is better)
Translates to: WSKIFVLQVNLNNGGNLLTAWEA*NSWQTI
Trigger: GATCGTCTGCCAGCTATTTCAGGCTTCCCAGGCTGT...CAAGAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CCA 90 bp GGCTGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCGATAACAGAAACACTTaGCACACCTACAGTGGACCA +
Preference number: 4 (lower is better)
Translates to: GWSKIFVLQVNLNNGGNLDNRNT*HTYSGP
Trigger: TGGTCCACTGTAGGTGTGCCAAGTGTTTCTGTTATC...GAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp GGCAGCCAGGCGGGCTGGGGCGTAGGCGGACAGGCTGGTGTGCAGCAGGGAGAGGCGCTCGGGGGCTCCTaGGTGCAGTGCCGCATGCAG +
Preference number: 5 (lower is better)
Translates to: GSQAGWGVGGQAGVQQGEALGGS*VQCRMQ
Trigger: CTGCATGCGGCACTGCACCAAGGAGCCCCCGAGCGC...CTCTCCCTGCTGCACACCAGCCTGTCCGCCTACGCCCCAGCCCGCCTGGCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS GCA 90 bp CAGCCGGGACGGGGTGTGGGCTCTCAGCGCTCGGGGGCTCCTTGGTaGAGTGCCGCATGCAGGCCCAGCGCAGGGTCTGGCCCGGATGAT +
Preference number: 5 (lower is better)
Translates to: QPGRGVGSQRSGAPW*SAACRPSAGSGPDD
Trigger: ATCATCCGGGCCAGACCCTGCGCTGGGCCTGCATGCGGCACTGCACCAAGGAGCCCCCGAGCGCTGAGAGCCCACACCCCGTCCCGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS CCA 90 bp AGACAGCCGGGACGGGGTGTGGGCTCTCAGCGCTCGGGGGCTCCTTaGTGCAGTGCCGCATGCAGGCCCAGCGCAGGGTCTGGCCCGGAT +
Preference number: 5 (lower is better)
Translates to: RQPGRGVGSQRSGAP*CSAACRPSAGSGPD
Trigger: ATCCGGGCCAGACCCTGCGCTGGGCCTGCATGCGGCACTGCACCAAGGAGCCCCCGAGCGCTGAGAGCCCACACCCCGTCCCGGCTGTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS GCA 90 bp GGTGTGGGCTCTCAGCGCTCGGGGGCTCCTTGGTGCAGTGCCGCATaGAGGCCCAGCGCAGGGTCTGGCCCGGATGATGTTCACGCCGAT +
Preference number: 5 (lower is better)
Translates to: GVGSQRSGAPWCSAA*RPSAGSGPDDVHAD
Trigger: ATCGGCGTGAACATCATCCGGGCCAGACCCTGCGCTGGGCCTGCATGCGGCACTGCACCAAGGAGCCCCCGAGCGCTGAGAGCCCACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS GCA 90 bp AGGGTCCAGGATCTACCCTCGGGGTCTTCCTGTGTCCTGGGACCCTaGAGGTGGCCTCGCAGGTGCTGCCCCTCGCCCAGACTCACCCTC +
Preference number: 5 (lower is better)
Translates to: RVQDLPSGSSCVLGP*RWPRRCCPSPRLTL
Trigger: GAGGGTGAGTCTGGGCGAGGGGCAGCACCTGCGAGGCCACCTGCAGGGTCCCAGGACACAGGAAGACCCCGAGGGTAGATCCTGGACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS TCA 90 bp TTGGTGCAGTGCCGCATGCAGGCCCAGCGCAGGGTCTGGCCCGGATaGTGTTCACGCCGATGCTGCACGCGTAGCGCACCAGCGCAGATG +
Preference number: 5 (lower is better)
Translates to: LVQCRMQAQRRVWPG*CSRRCCTRSAPAQM
Trigger: CATCTGCGCTGGTGCGCTACGCGTGCAGCATCGGCGTGAACATCATCCGGGCCAGACCCTGCGCTGGGCCTGCATGCGGCACTGCACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS CCA 90 bp GACTTTCCAGGGTCCAGGATCTACCCTCGGGGTCTTCCTGTGTCCTaGGACCCTGCAGGTGGCCTCGCAGGTGCTGCCCCTCGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: DFPGSRIYPRGLPVS*DPAGGLAGAAPRPD
Trigger: GTCTGGGCGAGGGGCAGCACCTGCGAGGCCACCTGCAGGGTCCCAGGACACAGGAAGACCCCGAGGGTAGATCCTGGACCCTGGAAAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS-3UTR CAA 90 bp GGCACCAGCCTCCTCCGCAGGTACCGGTCCACACACTCCACGGTCAGGTGCAGGTGGCAGCAGGGTGTGTaGTGGTCAGCCCGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: GTSLLRRYRSTHSTVRCRWQQGV*WSARSQ
Trigger: CTGGGAACGGGCTGACCACAACACACCCTGCTGCCA...CCTGCACCTGACCGTGGAGTGTGTGGACCGGTACCTGCGGAGGAGGCTGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp GAAGTGGATGGCAGCAGGGTGTGTTGTGGTCAGCCCGTTCCCAGGGAGAGGCCAGTGCGGACCAGGGGTTaGGGTCCAGGGGTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: EVDGSRVCCGQPVPRERPVRTRG*GPGVAG
Trigger: CCCTGCAACCCCTGGACCCAAACCCCTGGTCCGCAC...TGGCCTCTCCCTGGGAACGGGCTGACCACAACACACCCTGCTGCCATCCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp AAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACACCTGGCAGCAGGGTGTGTaGTGGTCAGCCCGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: KRESCQLPARGSGGAGNTWQQGV*WSARSQ
Trigger: CTGGGAACGGGCTGACCACAACACACCCTGCTGCCA...GGTGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp AAGCCCAGGGGTCTGCCTCCCTCCCACGGGCCCCCACAGCAGAGCTGCAGTTGGCTACAGTTCCAACGCTaGGGTTCTCACCCCGACCAC +
Preference number: 5 (lower is better)
Translates to: KPRGLPPSHGPPQQSCSWLQFQR*GSHPDH
Trigger: GTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAG...CCAACTGCAGCTCTGCTGTGGGGGCCCGTGGGAGGGAGGCAGACCCCTGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS GCA 90 bp CGCCGATGCTGCACGCGTAGCGCACCAGCGCAGATGGCGACGTGGTaGAACCGTGGCCTCCTGCTCCATGGTCGAATCTTCCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RRCCTRSAPAQMATW*NRGLLLHGRIFPSK
Trigger: CTTGGAAGGGAAGATTCGACCATGGAGCAGGAGGCCACGGTTGCACCACGTCGCCATCTGCGCTGGTGCGCTACGCGTGCAGCATCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS CCA 90 bp TCACGCCGATGCTGCACGCGTAGCGCACCAGCGCAGATGGCGACGTaGTGCAACCGTGGCCTCCTGCTCCATGGTCGAATCTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: SRRCCTRSAPAQMAT*CNRGLLLHGRIFPS
Trigger: GGAAGGGAAGATTCGACCATGGAGCAGGAGGCCACGGTTGCACCACGTCGCCATCTGCGCTGGTGCGCTACGCGTGCAGCATCGGCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS CCA 90 bp CCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGTaGGGACCTAGACAGCCGGGACGGGGTGTGGGCTCTCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: PQGLASAGPPCNPPQ*GPRQPGRGVGSQRS
Trigger: CGAGCGCTGAGAGCCCACACCCCGTCCCGGCTGTCTAGGTCCCCACTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR CAA 90 bp GCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGGGGGGCGGTCAGAGAGACTaGCCTGTAGTCCTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: APFPCRSRVSVASRKAQGGGQRD*PVVLGG
Trigger: GCCCCCAAGGACTACAGGCAAGTCTCTCTGACCGCC...CCCCTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS CCA 90 bp GACGGCCACAGCTCCTGGAAGCTGGCACATGCCCACACACTGGCGTaGTTGTCCACCAGGTCCTTCAGCTGGGAGTGTACAGCTCGGACG +
Preference number: 5 (lower is better)
Translates to: DGHSSWKLAHAHTLA*LSTRSFSWECTART
Trigger: CGTCCGAGCTGTACACTCCCAGCTGAAGGACCTGGTGGACAACCACGCCAGTGTGTGGGCATGTGCCAGCTTCCAGGAGCTGTGGCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397066.9
ENST00000569093.1
CDS CCA 90 bp CTGGAGACGGCCACAGCTCCTGGAAGCTGGCACATGCCCACACACTaGCGTGGTTGTCCACCAGGTCCTTCAGCTGGGAGTGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: LETATAPGSWHMPTH*RGCPPGPSAGSVQL
Trigger: GAGCTGTACACTCCCAGCTGAAGGACCTGGTGGACAACCACGCCAGTGTGTGGGCATGTGCCAGCTTCCAGGAGCTGTGGCCGTCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397066.9
ENST00000569093.1
CDS CCA 90 bp GATGATGTTCACGCCGATGCTGCACGCGTAGCGCACCAGCGCAGATaGCGACGTGGTGCAACCGTGGCCTCCTGCTCCATGGTCGAATCT +
Preference number: 5 (lower is better)
Translates to: DDVHADAARVAHQRR*RRGATVASCSMVES
Trigger: AGATTCGACCATGGAGCAGGAGGCCACGGTTGCACCACGTCGCCATCTGCGCTGGTGCGCTACGCGTGCAGCATCGGCGTGAACATCATC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS-3UTR CAA 90 bp TGCCCAGGGGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTTCTCCCGCTTCCGTTaGGTTCTCCGCCCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: CPGAHSRQDGSTVPTLGFFSRFR*VLRPEG
Trigger: TCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAA...GAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp CCACGGAGGGCGGATGAAGAGCCAGATGAAAGGTGCGGCACCCACATTCAGCCGGTTTGGGTCCAGGGGTaGCAGGGATCTGGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: PRRADEEPDERCGTHIQPVWVQG*QGSGCP
Trigger: TGGACACCCAGATCCCTGCAACCCCTGGACCCAAAC...CGGCTGAATGTGGGTGCCGCACCTTTCATCTGGCTCTTCATCCGCCCTCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp GGCACCAGCCTCCTCCGCAGGTACCGGTCCACACACTCCACGGTCAGGTGCAGGAGAGAGGTGTTCACATaGACGCCATCTGTGGGTCAC +
Preference number: 5 (lower is better)
Translates to: GTSLLRRYRSTHSTVRCRREVFT*TPSVGH
Trigger: GTGACCCACAGATGGCGTCAATGTGAACACCTCTCT...CCTGCACCTGACCGTGGAGTGTGTGGACCGGTACCTGCGGAGGAGGCTGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp CGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGACCACACCCCACCCAGGGCTACAGTTCCAACGCTaGGGTTCTCACCCCGACCAC +
Preference number: 5 (lower is better)
Translates to: RVYSSNAWVLTPTTPHPGLQFQR*GSHPDH
Trigger: GTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAG...CCCTGGGTGGGGTGTGGTCGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS CCA 90 bp GCCCTTTCAAAGAGCTTCAGGTTCCCTGGAGACGGCCACAGCTCCTaGAAGCTGGCACATGCCCACACACTGGCGTGGTTGTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: ALSKSFRFPGDGHSS*KLAHAHTLAWLSTR
Trigger: CCTGGTGGACAACCACGCCAGTGTGTGGGCATGTGCCAGCTTCCAGGAGCTGTGGCCGTCTCCAGGGAACCTGAAGCTCTTTGAAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397066.9
ENST00000569093.1
CDS GCA 90 bp CTTCAGGCCATTCACTTCTGCGCGGGCCTCATCAGACACAGACACTaGGGGGACAGACAGGACAGAGCCCAGGGATGTCTCTTAGGGACG +
Preference number: 5 (lower is better)
Translates to: LQAIHFCAGLIRHRH*GDRQDRAQGCLLGT
Trigger: CGTCCCTAAGAGACATCCCTGGGCTCTGTCCTGTCTGTCCCCGCAGTGTCTGTGTCTGATGAGGCCCGCGCAGAAGTGAATGGCCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS GCA 90 bp CTCAGCGAGACTGAAGAAGCGAGAGGCCTTCAGGCCATTCACTTCTaGGCGGGCCTCATCAGACACAGACACTGCGGGGACAGACAGGAC +
Preference number: 5 (lower is better)
Translates to: LSETEEARGLQAIHF*AGLIRHRHCGDRQD
Trigger: GTCCTGTCTGTCCCCGCAGTGTCTGTGTCTGATGAGGCCCGCGCAGAAGTGAATGGCCTGAAGGCCTCTCGCTTCTTCAGTCTCGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS CCA 90 bp CAAAGAGCTTCAGGTTCCCTGGAGACGGCCACAGCTCCTGGAAGCTaGCACATGCCCACACACTGGCGTGGTTGTCCACCAGGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: QRASGSLETATAPGS*HMPTHWRGCPPGPS
Trigger: TGAAGGACCTGGTGGACAACCACGCCAGTGTGTGGGCATGTGCCAGCTTCCAGGAGCTGTGGCCGTCTCCAGGGAACCTGAAGCTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397066.9
ENST00000569093.1
CDS TCA 90 bp CGTGCTCATGGCGCACAGGGCAGGGAGCCCAAACAGCCCCCGTGCTaGGGCTCTGGCTCAGTCACTCTTTGCCAACTGAAATTAAAGGGT +
Preference number: 5 (lower is better)
Translates to: RAHGAQGREPKQPPC*GSGSVTLCQLKLKG
Trigger: ACCCTTTAATTTCAGTTGGCAAAGAGTGACTGAGCCAGAGCCTCAGCACGGGGGCTGTTTGGGCTCCCTGCCCTGTGCGCCATGAGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564333.1
ENST00000569093.1
CDS-3UTR CAA 90 bp CAGGGGCTCAAGTGGTGTCTGACTACCCAGGTCACACGTGCCTTAAGCGTGAAATTCTCCCGCTTCCGTTaGGTTCTCCGCCCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: QGLKWCLTTQVTRALSVKFSRFR*VLRPEG
Trigger: TCCCTCGGGGCGGAGAACCAAACGGAAGCGGGAGAA...TTTCACGCTTAAGGCACGTGTGACCTGGGTAGTCAGACACCACTTGAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp AGAGCTCTAAAACGAGTCACGTGTCGTAGGGAGTGGGCCTGTGGCCAAGGCAGTGTTTGGGTCCAGGGGTaGCAGGGATCTGGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: RALKRVTCRREWACGQGSVWVQG*QGSGCP
Trigger: TGGACACCCAGATCCCTGCAACCCCTGGACCCAAAC...ACTGCCTTGGCCACAGGCCCACTCCCTACGACACGTGACTCGTTTTAGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp CCTCCACACAGTGTGGCCAACTGCTTCCAGGCTAAACTTTCCAAAGAGAGGGATGTGCGGACCAGGGGTTaGGGTCCAGGGGTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: PPHSVANCFQAKLSKERDVRTRG*GPGVAG
Trigger: CCCTGCAACCCCTGGACCCAAACCCCTGGTCCGCAC...ATCCCTCTCTTTGGAAAGTTTAGCCTGGAAGCAGTTGGCCACACTGTGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp TTCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTCACACACTGGCGTGGTaGTCCACCAGGTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: FLCYAPTLRLQPPQYTSTHTLAW*STRSFS
Trigger: GCTGAAGGACCTGGTGGACAACCACGCCAGTGTGTG...AGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397066.9
CDS-3UTR CAA 90 bp GCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCTTCTGCACGGAGAAGACTaGTTGTTTACTGACAGCCTG +
Preference number: 5 (lower is better)
Translates to: AVGISQDTAPDCSALLPLLHGED*LFTDSL
Trigger: CAGGCTGTCAGTAAACAACAAGTCTTCTCCGTGCAG...AAGAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp TTAAGCGTGAAAGCTGTCAGCTCCCGGCACGGGGCTCTGGTGGGGCTGGGAACATACCTCATTGTGTCATaGAGTCCCTTCTGCACGGAG +
Preference number: 5 (lower is better)
Translates to: LSVKAVSSRHGALVGLGTYLIVS*SPFCTE
Trigger: CTCCGTGCAGAAGGGACTCAATGACACAATGAGGTA...TGTTCCCAGCCCCACCAGAGCCCCGTGCCGGGAGCTGACAGCTTTCACGCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp TCCACTGCGGCAAATGTGCTGACACACTTACAGCCTCACAAGGCCCAGGTTCATGGCGGTCAGAGAGACTaGCCTGTAGTCCTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: STAANVLTHLQPHKAQVHGGQRD*PVVLGG
Trigger: GCCCCCAAGGACTACAGGCAAGTCTCTCTGACCGCC...ATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGCAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp TTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGTGCTCTCCGGGGGACTaGGGGGACGACACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: FSAPQGLASAGPPCNPPQCSPGD*GDDTVN
Trigger: GTTTACAGTGTCGTCCCCCAAGTCCCCCGGAGAGCA...CTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp GGAACACCAGGACACACATGGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGTGCTCTCCGGGGGACTaGGGGGACGACACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: GTPGHTWAEASRDSETRKCSPGD*GDDTVN
Trigger: GTTTACAGTGTCGTCCCCCAAGTCCCCCGGAGAGCA...CTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCCATGTGTGTCCTGGTGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp CAGGCTCCCTTTCCATGCAGGAGCAGAGTCTCCGTGGCCAGCAGGAAAGCCCAGTGTGTCAGGATGGCATaGAGGGGCTGGAGTAAGATT +
Preference number: 5 (lower is better)
Translates to: QAPFPCRSRVSVASRKAQCVRMA*RGWSKI
Trigger: AATCTTACTCCAGCCCCTCAATGCCATCCTGACACA...CTGGGCTTTCCTGCTGGCCACGGAGACTCTGCTCCTGCATGGAAAGGGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp CTGCAGTTGGGATCAGCCAGGACACGGCCCCCGACTGCTCTGCTCTTCTGCCTCGGAGGTTACAGTGAGTaGAGAGTTGAGATCATGCCA +
Preference number: 5 (lower is better)
Translates to: LQLGSARTRPPTALLFCLGGYSE*RVEIMP
Trigger: TGGCATGATCTCAACTCTCAACTCACTGTAACCTCC...GAGGCAGAAGAGCAGAGCAGTCGGGGGCCGTGTCCTGGCTGATCCCAACTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS CCA 90 bp TGCAAAGTCAGAGTATCATTAGCAGGTCCCTCAGCAGGGTACATCTaGGCACGAGCTCCTGAGAGGGAATGGGGAGGCAGGCCATCGGAT +
Preference number: 5 (lower is better)
Translates to: CKVRVSLAGPSAGYI*ARAPEREWGGRPSD
Trigger: ATCCGATGGCCTGCCTCCCCATTCCCTCTCAGGAGCTCGTGCCCAGATGTACCCTGCTGAGGGACCTGCTAATGATACTCTGACTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569093.1
CDS-3UTR CAA 90 bp CACAGGTGCTGGGTTCTCAGCTCCACAGGGACTAGCGTCAGCAGGACCTCCTTGCACGGAGAAGACTTGTaGTTTACTGACAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: HRCWVLSSTGTSVSRTSLHGEDL*FTDSLG
Trigger: TCCCAGGCTGTCAGTAAACAACAAGTCTTCTCCGTG...CAAGGAGGTCCTGCTGACGCTAGTCCCTGTGGAGCTGAGAACCCAGCACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR CAA 90 bp CTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGCGGCAAATACCTCATTGTGTCATaGAGTCCCTTCTGCACGGAG +
Preference number: 5 (lower is better)
Translates to: LCSHPSPPAPSVHIHCGKYLIVS*SPFCTE
Trigger: CTCCGTGCAGAAGGGACTCAATGACACAATGAGGTA...TTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp ATAGGAGAATCCGGTGAGGTCCCACAGCTGAGTGGTCCAGGGCTGTGTCTGCCCTACCTCATTGTGTCATaGAGTCCCTTCTGCACGGAG +
Preference number: 5 (lower is better)
Translates to: IGESGEVPQLSGPGLCLPYLIVS*SPFCTE
Trigger: CTCCGTGCAGAAGGGACTCAATGACACAATGAGGTA...GGGCAGACACAGCCCTGGACCACTCAGCTGTGGGACCTCACCGGATTCTCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000564236.1
CDS-3UTR CAA 90 bp CAAGACGCAGGGAATGAGGTCTTCATAGGAGAATCCGGTGAGGTCCCACAGCTGCGCGGAGACAGAAACTaGGTGGCCGCAAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: QDAGNEVFIGESGEVPQLRGDRN*VAASHP
Trigger: AGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGCG...CAGCTGTGGGACCTCACCGGATTCTCCTATGAAGACCTCATTCCCTGCGTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp CTTCACCCTCATTTCAACATTCTGATGGCTTGCACGGGACTCCCGCGGAGACAGCGCGGAGACAGAAACTaGGTGGCCGCAAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: LHPHFNILMACTGLPRRQRGDRN*VAASHP
Trigger: AGGATGACTTGCGGCCACCAAGTTTCTGTCTCCGCG...CTGTCTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTGAAATGAGGGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp AGACTTGCCTGTAGTCCTTGGGGGCGTCATCATGGAAGCACTTCTTATGGAGGCCAACATTCTGATGGCTaGCACGGGACTCCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: RLACSPWGRHHGSTSYGGQHSDG*HGTPAE
Trigger: CTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTG...GCCTCCATAAGAAGTGCTTCCATGATGACGCCCCCAAGGACTACAGGCAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp GGCACACAGTCGACAGGACGGGTCTACAGTTCCAACGCTTGGGTTCTCACCCCGCTGCTCTTCTGCCTCTaGGTCACCTCAGATGTTACA +
Preference number: 5 (lower is better)
Translates to: GTQSTGRVYSSNAWVLTPLLFCL*VTSDVT
Trigger: TGTAACATCTGAGGTGACCAAGAGGCAGAAGAGCAG...CGGGGTGAGAACCCAAGCGTTGGAACTGTAGACCCGTCCTGTCGACTGTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS CCA 90 bp GAAATTCCCCTTTTCAGCAGCCCTTTCAAAGAGCTTCAGGTTCCCTaGAGACGGCCACAGCTCCTGGAAGCTGGCACATGCCCACACACT +
Preference number: 5 (lower is better)
Translates to: EIPLFSSPFKELQVP*RRPQLLEAGTCPHT
Trigger: AGTGTGTGGGCATGTGCCAGCTTCCAGGAGCTGTGGCCGTCTCCAGGGAACCTGAAGCTCTTTGAAAGGGCTGCTGAAAAGGGGAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397066.9
ENST00000569093.1
CDS-3UTR CAA 90 bp GAAACTGAGGCTCACACATGCCCAGGGGCACACAGTCGACAGGACGGGTCTACACACGGAGAAGACTTGTaGTTTACTGACAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: ETEAHTCPGAHSRQDGSTHGEDL*FTDSLG
Trigger: TCCCAGGCTGTCAGTAAACAACAAGTCTTCTCCGTG...TGTAGACCCGTCCTGTCGACTGTGTGCCCCTGGGCATGTGTGAGCCTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp GCGGCAAATGTGCTGACACACTTACAGCCTCACAAGGCCCAGGTTCATGTCCTCTATCCGCTTCACCTGTaGCTGGGGAACACTGCTCTC +
Preference number: 5 (lower is better)
Translates to: AANVLTHLQPHKAQVHVLYPLHL*LGNTAL
Trigger: GAGAGCAGTGTTCCCCAGCAACAGGTGAAGCGGATA...GAGGACATGAACCTGGGCCTTGTGAGGCTGTAAGTGTGTCAGCACATTTGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp TCCTATGCTATGCTCCCACCCTTCGCCTCCAGCCCCCTCAGTACACATCCACTGCTGCTCTTCTGCCTCTaGGTCACCTCAGATGTTACA +
Preference number: 5 (lower is better)
Translates to: SYAMLPPFASSPLSTHPLLLFCL*VTSDVT
Trigger: TGTAACATCTGAGGTGACCAAGAGGCAGAAGAGCAG...CAGTGGATGTGTACTGAGGGGGCTGGAGGCGAAGGGTGGGAGCATAGCATAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp GGGCTGAAGCTTCCAGAGACAGTGAGACACGGAAGGGACAGAGAGGTGCCCTCCGGAGGTTACAGTGAGTaGAGAGTTGAGATCATGCCA +
Preference number: 5 (lower is better)
Translates to: GLKLPETVRHGRDREVPSGGYSE*RVEIMP
Trigger: TGGCATGATCTCAACTCTCAACTCACTGTAACCTCC...GGAGGGCACCTCTCTGTCCCTTCCGTGTCTCACTGTCTCTGGAAGCTTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS GCA 90 bp GGGCCTCATCAGACACAGACAGGCCTTCATTGTAGAGGTAGGCTATaGCCAGCTTCACAGCAGCTTCGAAATTCCCCTTTTCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GPHQTQTGLHCRGRL*PASQQLRNSPFQQP
Trigger: GGGCTGCTGAAAAGGGGAATTTCGAAGCTGCTGTGAAGCTGGGCATAGCCTACCTCTACAATGAAGGCCTGTCTGTGTCTGATGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397066.9
CDS CCA 90 bp CAGGCCAGTTCTAACCTGCCTGTACCTGCTTCCCGTTTAGAAGCCTaGCTCTGTGTTACAGGGCACGCTGAACTCTGTCTCGAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: QASSNLPVPASRLEA*LCVTGHAELCLESS
Trigger: AGAACTCTCGAGACAGAGTTCAGCGTGCCCTGTAACACAGAGCCAGGCTTCTAAACGGGAAGCAGGTACAGGCAGGTTAGAACTGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564333.1
ENST00000569093.1
CDS-3UTR CAA 90 bp ACTGAAGCCCCAAACCAGCAGATGTGGGCAGGGGCTCAAGTGGTGTCTGACTACCACGGAGAAGACTTGTaGTTTACTGACAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: TEAPNQQMWAGAQVVSDYHGEDL*FTDSLG
Trigger: TCCCAGGCTGTCAGTAAACAACAAGTCTTCTCCGTG...GTAGTCAGACACCACTTGAGCCCCTGCCCACATCTGCTGGTTTGGGGCTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS TCA 90 bp GCTCGGACGGCCAGGATGTCCTCTACAGAAAGCCATTTCAGGATGTaGAAGAGCACATCTTCGGGGAGACTCAAGATGGTCAGGTTTCGG +
Preference number: 5 (lower is better)
Translates to: ARTARMSSTESHFRM*KSTSSGRLKMVRFR
Trigger: CCGAAACCTGACCATCTTGAGTCTCCCCGAAGATGTGCTCTTTCACATCCTGAAATGGCTTTCTGTAGAGGACATCCTGGCCGTCCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293968.11
ENST00000397066.9
ENST00000569093.1
CDS GCA 90 bp GGGCCTCATCAGACACAGACAGGCCTTCATTGTAGAGGTAGGCTATaGCCAGCTTCACAGCAGCTTCGAAATTCCCCTTTTCAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GPHQTQTGLHCRGRL*PASQQLRNSPFQQP
Trigger: TGGCTGCTGAAAAGGGGAATTTCGAAGCTGCTGTGAAGCTGGGCATAGCCTACCTCTACAATGAAGGCCTGTCTGTGTCTGATGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp CTCCAGCCCCCTCAGTACACATCCACTGCGGCAAATGTGCTGACACACTTACAGCTGCACGGAGAAGACTaGTTGTTTACTGACAGCCTG +
Preference number: 5 (lower is better)
Translates to: LQPPQYTSTAANVLTHLQLHGED*LFTDSL
Trigger: CAGGCTGTCAGTAAACAACAAGTCTTCTCCGTGCAG...CTGTAAGTGTGTCAGCACATTTGCCGCAGTGGATGTGTACTGAGGGGGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp CCTCCACACAGTGTGGCCAACTGCTTCCAGGCTAAACTTTCCAAAGAGAGGGATTATCCGCTTCACCTGTaGCTGGGGAACACTGCTCTC +
Preference number: 5 (lower is better)
Translates to: PPHSVANCFQAKLSKERDYPLHL*LGNTAL
Trigger: GAGAGCAGTGTTCCCCAGCAACAGGTGAAGCGGATA...ATCCCTCTCTTTGGAAAGTTTAGCCTGGAAGCAGTTGGCCACACTGTGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS-3UTR CAA 90 bp GGACAAGCCTCCTCATCACTGGATTCCTGGCAGCAATGCTGTTCTGGGTTCAGGTGTGTCAGGATGGCATaGAGGGGCTGGAGTAAGATT +
Preference number: 5 (lower is better)
Translates to: GQASSSLDSWQQCCSGFRCVRMA*RGWSKI
Trigger: AATCTTACTCCAGCCCCTCAATGCCATCCTGACACA...CCTGAACCCAGAACAGCATTGCTGCCAGGAATCCAGTGATGAGGAGGCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293968.11
CDS-3UTR CAA 90 bp GGCTGGAGTAAGATTTTTGTTTTGCAGGTGAACCTAAATAATGGTGGGAATCTCCAACATTCTGATGGCTaGCACGGGACTCCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: GWSKIFVLQVNLNNGGNLQHSDG*HGTPAE
Trigger: CTCCGCGGGAGTCCCGTGCAAGCCATCAGAATGTTG...GAGATTCCCACCATTATTTAGGTTCACCTGCAAAACAAAAATCTTACTCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS CCA 90 bp GGACTCTCTCCCAGCAAGACACCAGATCGTTTAGAAGTACAAATGTaGGAGGCTACATCCCAGTGTTTACTTGTTTTGAGAGCTGGGACA +
Preference number: 5 (lower is better)
Translates to: GLSPSKTPDRLEVQM*EATSQCLLVLRAGT
Trigger: TGTCCCAGCTCTCAAAACAAGTAAACACTGGGATGTAGCCTCCCACATTTGTACTTCTAAACGATCTGGTGTCTTGCTGGGAGAGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS-3UTR CAA 90 bp AAAGAATGGCCCAGAAATTCAGCACAAAGAGAGGTGTTCACATTGACGCCATCTAGAGAGGTGTTCACATaGACGCCATCTGTGGGTCAC +
Preference number: 5 (lower is better)
Translates to: KEWPRNSAQREVFTLTPSREVFT*TPSVGH
Trigger: GTGACCCACAGATGGCGTCAATGTGAACACCTCTCT...AGATGGCGTCAATGTGAACACCTCTCTTTGTGCTGAATTTCTGGGCCATTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS GCA 90 bp CTGAAATTAAAGGGTTTGCTAAAACAAGAGGCGACTTTCGTAACCTaGAAAGTCAGAGTATCATTAGCAGGTCCCTCAGCAGGGTACATC +
Preference number: 5 (lower is better)
Translates to: LKLKGLLKQEATFVT*KVRVSLAGPSAGYI
Trigger: GATGTACCCTGCTGAGGGACCTGCTAATGATACTCTGACTTTGCAGGTTACGAAAGTCGCCTCTTGTTTTAGCAAACCCTTTAATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564333.1
ENST00000569093.1
CDS GCA 72 bp TGTGGGCTCTCAGCGCTCGGGGGCTCCTTGGTGCAGTaGCGCATGCAGGCCCAGCGCAGGGTCTGGCCCGGA +
Preference number: 6 (lower is better)
Translates to: CGLSALGGSLVQ*RMQAQRRVWPG
Trigger: TCCGGGCCAGACCCTGCGCTGGGCCTGCATGCGGCACTGCACCAAGGAGCCCCCGAGCGCTGAGAGCCCACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS TCA 72 bp CATGTCCCACCCTCCCTCCAGCTGGGAACCACCGCCTaGCCCCTGGTAATGGGTCCAGGGCAGGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: HVPPSLQLGTTA*PLVMGPGQGWG
Trigger: CCCCCACCCCTGCCCTGGACCCATTACCAGGGGTCAGGCGGTGGTTCCCAGCTGGAGGGAGGGTGGGACATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS TCA 72 bp TGCCGCATGCAGGCCCAGCGCAGGGTCTGGCCCGGATaGTGTTCACGCCGATGCTGCACGCGTAGCGCACCA +
Preference number: 6 (lower is better)
Translates to: CRMQAQRRVWPG*CSRRCCTRSAP
Trigger: TGGTGCGCTACGCGTGCAGCATCGGCGTGAACATCATCCGGGCCAGACCCTGCGCTGGGCCTGCATGCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS GCA 72 bp TCTCAGCGCTCGGGGGCTCCTTGGTGCAGTGCCGCATaGAGGCCCAGCGCAGGGTCTGGCCCGGATGATGTT +
Preference number: 6 (lower is better)
Translates to: SQRSGAPWCSAA*RPSAGSGPDDV
Trigger: AACATCATCCGGGCCAGACCCTGCGCTGGGCCTGCATGCGGCACTGCACCAAGGAGCCCCCGAGCGCTGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS GCA 72 bp GATCTACCCTCGGGGTCTTCCTGTGTCCTGGGACCCTaGAGGTGGCCTCGCAGGTGCTGCCCCTCGCCCAGA +
Preference number: 6 (lower is better)
Translates to: DLPSGSSCVLGP*RWPRRCCPSPR
Trigger: TCTGGGCGAGGGGCAGCACCTGCGAGGCCACCTGCAGGGTCCCAGGACACAGGAAGACCCCGAGGGTAGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS CCA 72 bp CACGCCGATGCTGCACGCGTAGCGCACCAGCGCAGATaGCGACGTGGTGCAACCGTGGCCTCCTGCTCCATG +
Preference number: 6 (lower is better)
Translates to: HADAARVAHQRR*RRGATVASCSM
Trigger: CATGGAGCAGGAGGCCACGGTTGCACCACGTCGCCATCTGCGCTGGTGCGCTACGCGTGCAGCATCGGCGTG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS CCA 72 bp GGGTCCAGGATCTACCCTCGGGGTCTTCCTGTGTCCTaGGACCCTGCAGGTGGCCTCGCAGGTGCTGCCCCT +
Preference number: 6 (lower is better)
Translates to: GSRIYPRGLPVS*DPAGGLAGAAP
Trigger: AGGGGCAGCACCTGCGAGGCCACCTGCAGGGTCCCAGGACACAGGAAGACCCCGAGGGTAGATCCTGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS CCA 72 bp TGCTGCACGCGTAGCGCACCAGCGCAGATGGCGACGTaGTGCAACCGTGGCCTCCTGCTCCATGGTCGAATC +
Preference number: 6 (lower is better)
Translates to: CCTRSAPAQMAT*CNRGLLLHGRI
Trigger: GATTCGACCATGGAGCAGGAGGCCACGGTTGCACCACGTCGCCATCTGCGCTGGTGCGCTACGCGTGCAGCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS CAA 90 bp GGCCACAGCTCCTGGAAGCTGGCACATGCCCACACACTGGCGTGGTaGTCCACCAGGTCCTTCAGCTGGGAGTGTACAGCTCGGACGGCC +
Preference number: 6 (lower is better)
Translates to: GHSSWKLAHAHTLAW*STRSFSWECTARTA
Trigger: GGCCGTCCGAGCTGTACACTCCCAGCTGAAGGACCTGGTGGACAACCACGCCAGTGTGTGGGCATGTGCCAGCTTCCAGGAGCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397066.9
ENST00000569093.1
CDS GCA 72 bp TGCACGCGTAGCGCACCAGCGCAGATGGCGACGTGGTaGAACCGTGGCCTCCTGCTCCATGGTCGAATCTTC +
Preference number: 6 (lower is better)
Translates to: CTRSAPAQMATW*NRGLLLHGRIF
Trigger: GAAGATTCGACCATGGAGCAGGAGGCCACGGTTGCACCACGTCGCCATCTGCGCTGGTGCGCTACGCGTGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS CCA 72 bp TCAGGTTCCCTGGAGACGGCCACAGCTCCTGGAAGCTaGCACATGCCCACACACTGGCGTGGTTGTCCACCA +
Preference number: 6 (lower is better)
Translates to: SGSLETATAPGS*HMPTHWRGCPP
Trigger: TGGTGGACAACCACGCCAGTGTGTGGGCATGTGCCAGCTTCCAGGAGCTGTGGCCGTCTCCAGGGAACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397066.9
ENST00000569093.1
CDS CCA 72 bp CTAGCGTCAGCAGGACCTCCTTGTAATCCACCACAGTaGGGACCTAGACAGCCGGGACGGGGTGTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: LASAGPPCNPPQ*GPRQPGRGVGS
Trigger: AGAGCCCACACCCCGTCCCGGCTGTCTAGGTCCCCACTGTGGTGGATTACAAGGAGGTCCTGCTGACGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564236.1
CDS GCA 72 bp ACTGAAGAAGCGAGAGGCCTTCAGGCCATTCACTTCTaGGCGGGCCTCATCAGACACAGACACTGCGGGGAC +
Preference number: 6 (lower is better)
Translates to: TEEARGLQAIHF*AGLIRHRHCGD
Trigger: GTCCCCGCAGTGTCTGTGTCTGATGAGGCCCGCGCAGAAGTGAATGGCCTGAAGGCCTCTCGCTTCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS CCA 72 bp AGCTCCTGGAAGCTGGCACATGCCCACACACTGGCGTaGTTGTCCACCAGGTCCTTCAGCTGGGAGTGTACA +
Preference number: 6 (lower is better)
Translates to: SSWKLAHAHTLA*LSTRSFSWECT
Trigger: TGTACACTCCCAGCTGAAGGACCTGGTGGACAACCACGCCAGTGTGTGGGCATGTGCCAGCTTCCAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397066.9
ENST00000569093.1
CDS CAA 72 bp TCCTGGAAGCTGGCACATGCCCACACACTGGCGTGGTaGTCCACCAGGTCCTTCAGCTGGGAGTGTACAGCT +
Preference number: 6 (lower is better)
Translates to: SWKLAHAHTLAW*STRSFSWECTA
Trigger: AGCTGTACACTCCCAGCTGAAGGACCTGGTGGACAACCACGCCAGTGTGTGGGCATGTGCCAGCTTCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397066.9
ENST00000569093.1
CDS CCA 72 bp AGAGTATCATTAGCAGGTCCCTCAGCAGGGTACATCTaGGCACGAGCTCCTGAGAGGGAATGGGGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RVSLAGPSAGYI*ARAPEREWGGR
Trigger: CCTGCCTCCCCATTCCCTCTCAGGAGCTCGTGCCCAGATGTACCCTGCTGAGGGACCTGCTAATGATACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564333.1
ENST00000569093.1
CDS CCA 72 bp GGGCAGGGAGCCCAAACAGCCCCCGTGCTGAGGCTCTaGCTCAGTCACTCTTTGCCAACTGAAATTAAAGGG +
Preference number: 6 (lower is better)
Translates to: GQGAQTAPVLRL*LSHSLPTEIKG
Trigger: CCCTTTAATTTCAGTTGGCAAAGAGTGACTGAGCCAGAGCCTCAGCACGGGGGCTGTTTGGGCTCCCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564333.1
ENST00000569093.1
CDS CCA 72 bp CTTTTCAGCAGCCCTTTCAAAGAGCTTCAGGTTCCCTaGAGACGGCCACAGCTCCTGGAAGCTGGCACATGC +
Preference number: 6 (lower is better)
Translates to: LFSSPFKELQVP*RRPQLLEAGTC
Trigger: GCATGTGCCAGCTTCCAGGAGCTGTGGCCGTCTCCAGGGAACCTGAAGCTCTTTGAAAGGGCTGCTGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397066.9
ENST00000569093.1
CDS CCA 72 bp AAGAAAAGGCTGCGCAAGTTTCTTTCAAGGAGCACCTaGCCTCTGGGGATGAAGGGATCCAGGCACCAGGCC +
Preference number: 6 (lower is better)
Translates to: KKRLRKFLSRST*PLGMKGSRHQA
Trigger: GGCCTGGTGCCTGGATCCCTTCATCCCCAGAGGCCAGGTGCTCCTTGAAAGAAACTTGCGCAGCCTTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS GCA 72 bp TGTCTAGAACAGGTGGGTCATTGTGATCAATGCCCCTaGTGTGGTCCTCCCGGAAGCCTGGATTCTGAAGGT +
Preference number: 6 (lower is better)
Translates to: CLEQVGHCDQCP*CGPPGSLDSEG
Trigger: ACCTTCAGAATCCAGGCTTCCGGGAGGACCACAGCAGGGGCATTGATCACAATGACCCACCTGTTCTAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS CCA 72 bp GGATGTGAAAGAGCACATCTTCGGGGAGACTCAAGATaGTCAGGTTTCGGGGCCTCCTCCTTATTCTTCGCT +
Preference number: 6 (lower is better)
Translates to: GCERAHLRGDSR*SGFGASSLFFA
Trigger: AGCGAAGAATAAGGAGGAGGCCCCGAAACCTGACCATCTTGAGTCTCCCCGAAGATGTGCTCTTTCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293968.11
ENST00000397066.9
ENST00000569093.1
CDS CAA 90 bp GGAGCCCAAACAGCCCCCGTGCTGAGGCTCTGGCTCAGTCACTCTTaGCCAACTGAAATTAAAGGGTTTGCTAAAACAAGAGGCGACTTT +
Preference number: 6 (lower is better)
Translates to: GAQTAPVLRLWLSHS*PTEIKGFAKTRGDF
Trigger: AAAGTCGCCTCTTGTTTTAGCAAACCCTTTAATTTCAGTTGGCAAAGAGTGACTGAGCCAGAGCCTCAGCACGGGGGCTGTTTGGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564333.1
ENST00000569093.1
CDS TCA 72 bp AGCTGGGACAGATCATGGGCTCGTTCCTTGGGGTGCTaGGCAGATAAGCAGTTAACTGGTAGAAGAAAAGGC +
Preference number: 6 (lower is better)
Translates to: SWDRSWARSLGC*ADKQLTGRRKG
Trigger: GCCTTTTCTTCTACCAGTTAACTGCTTATCTGCTCAGCACCCCAAGGAACGAGCCCATGATCTGTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS GCA 72 bp CTCAGGCTTCCTCCTCTGTGCCAGCTGATTTCCAGATaGGTTCCCCATATCTGCACTCTCAGTTTTCTGCAT +
Preference number: 6 (lower is better)
Translates to: LRLPPLCQLISR*VPHICTLSFLH
Trigger: ATGCAGAAAACTGAGAGTGCAGATATGGGGAACGCATCTGGAAATCAGCTGGCACAGAGGAGGAAGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS CCA 72 bp GGACAGAGCCCAGGGATGTCTCTTAGGGACGGAATGTaGAAAGCTCTCCATGGTCTTGGTGGAAAGTGTAAT +
Preference number: 6 (lower is better)
Translates to: GQSPGMSLRDGM*KALHGLGGKCN
Trigger: ATTACACTTTCCACCAAGACCATGGAGAGCTTTCCACATTCCGTCCCTAAGAGACATCCCTGGGCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS TCA 72 bp AAATGTGGGAGGCTACATCCCAGTGTTTACTTGTTTTaGGAGCTGGGACAGATCATGGGCTCGTTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: KCGRLHPSVYLF*ELGQIMGSFLG
Trigger: CCCAAGGAACGAGCCCATGATCTGTCCCAGCTCTCAAAACAAGTAAACACTGGGATGTAGCCTCCCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS GCA 72 bp CAGACACAGACAGGCCTTCATTGTAGAGGTAGGCTATaGCCAGCTTCACAGCAGCTTCGAAATTCCCCTTTT +
Preference number: 6 (lower is better)
Translates to: QTQTGLHCRGRL*PASQQLRNSPF
Trigger: AAAAGGGGAATTTCGAAGCTGCTGTGAAGCTGGGCATAGCCTACCTCTACAATGAAGGCCTGTCTGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293968.11
ENST00000397066.9
CDS GCA 72 bp GTGAGGACTTACGGCCTTCATTGTAGAGGTAGGCTATaGCCAGCTTCACAGCAGCTTCGAAATTCCCCTTTT +
Preference number: 6 (lower is better)
Translates to: VRTYGLHCRGRL*PASQQLRNSPF
Trigger: AAAAGGGGAATTTCGAAGCTGCTGTGAAGCTGGGCATAGCCTACCTCTACAATGAAGGCCGTAAGTCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569093.1
CDS CAA 72 bp CAAATGTGGGAGGCTACATCCCAGTGTTTACTTGTTTaGAGAGCTGGGACAGATCATGGGCTCGTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: QMWEATSQCLLV*RAGTDHGLVPW
Trigger: CCAAGGAACGAGCCCATGATCTGTCCCAGCTCTCAAAACAAGTAAACACTGGGATGTAGCCTCCCACATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS CAA 90 bp TTAGAAGTACAAATGTGGGAGGCTACATCCCAGTGTTTACTTGTTTaGAGAGCTGGGACAGATCATGGGCTCGTTCCTTGGGGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LEVQMWEATSQCLLV*RAGTDHGLVPWGAE
Trigger: CTCAGCACCCCAAGGAACGAGCCCATGATCTGTCCCAGCTCTCAAAACAAGTAAACACTGGGATGTAGCCTCCCACATTTGTACTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS CAA 72 bp ACAGCCCCCGTGCTGAGGCTCTGGCTCAGTCACTCTTaGCCAACTGAAATTAAAGGGTTTGCTAAAACAAGA +
Preference number: 6 (lower is better)
Translates to: TAPVLRLWLSHS*PTEIKGFAKTR
Trigger: TCTTGTTTTAGCAAACCCTTTAATTTCAGTTGGCAAAGAGTGACTGAGCCAGAGCCTCAGCACGGGGGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564333.1
ENST00000569093.1
CDS GCA 72 bp AAGGGTTTGCTAAAACAAGAGGCGACTTTCGTAACCTaGAAAGTCAGAGTATCATTAGCAGGTCCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: KGLLKQEATFVT*KVRVSLAGPSA
Trigger: TGCTGAGGGACCTGCTAATGATACTCTGACTTTGCAGGTTACGAAAGTCGCCTCTTGTTTTAGCAAACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564333.1
ENST00000569093.1
CDS CCA 72 bp CCCAGCAAGACACCAGATCGTTTAGAAGTACAAATGTaGGAGGCTACATCCCAGTGTTTACTTGTTTTGAGA +
Preference number: 6 (lower is better)
Translates to: PSKTPDRLEVQM*EATSQCLLVLR
Trigger: TCTCAAAACAAGTAAACACTGGGATGTAGCCTCCCACATTTGTACTTCTAAACGATCTGGTGTCTTGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564333.1
CDS CAA 72 bp GGCTCAGTCACTCTTTGCCAACTGAAATTAAAGGGTTaGCTAAAACAAGAGGCGACTTTCGTAACCTGCAAA +
Preference number: 6 (lower is better)
Translates to: GSVTLCQLKLKG*LKQEATFVTCK
Trigger: TTTGCAGGTTACGAAAGTCGCCTCTTGTTTTAGCAAACCCTTTAATTTCAGTTGGCAAAGAGTGACTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564333.1
ENST00000569093.1