RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCND2 (Homo sapiens)

Ensembl gene IDs: ENSG00000118971

Ensembl transcript IDs: ENST00000261254.8, ENST00000536537.2, ENST00000536795.1, ENST00000541542.1, ENST00000675880.1, ENST00000676279.1, ENST00000676411.1

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAGCTCGCCTCTCAGCACGCATGGGGTGTTCTGCGGAGGGAACTaGCCTTGGCTTTCTCCTGCAGGCTTCTTGGCTGTTATGGACCCG +
Preference number: 1 (lower is better)
Translates to: RSSPLSTHGVFCGGN*PWLSPAGFLAVMDP
Trigger: CGGGTCCATAACAGCCAAGAAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTCCGCAGAACACCCCATGCGTGCTGAGAGGCGAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR GCA 90 bp GCCCCTTCTTCAAGGAGCTCGCCTCTCAGCACGCATGGGGTGTTCTaGGGAGGGAACTGCCCTTGGCTTTCTCCTGCAGGCTTCTTGGCT +
Preference number: 1 (lower is better)
Translates to: APSSRSSPLSTHGVF*GGNCPWLSPAGFLA
Trigger: AGCCAAGAAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTCCGCAGAACACCCCATGCGTGCTGAGAGGCGAGCTCCTTGAAGAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR GCA 90 bp AGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATaGAGCGTGATGCTGTCAGGGTTGTCTTCTCCTCTGGCTTTGTCA +
Preference number: 1 (lower is better)
Translates to: SAAPSEELPILLAMG*SVMLSGLSSPLALS
Trigger: TGACAAAGCCAGAGGAGAAGACAACCCTGACAGCATCACGCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR TCA 90 bp GGCCCATGGAGAGAAAATTCCCCTGCCCTCTTGGAGAGAGTCATCTaGTCCTGCCTTATGTTCTTAACCTTTCAGTCCCAGAGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: GPWRENSPALLERVI*SCLMFLTFQSQSSQ
Trigger: CTGGGAGCTCTGGGACTGAAAGGTTAAGAACATAAGGCAGGATCAGATGACTCTCTCCAAGAGGGCAGGGGAATTTTCTCTCCATGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR GCA 90 bp GTAATGGCTACAGTCAGTAAGGCACTTTATTTCCCCAAAGTAGGCTaGAGGCGAAGGGATGCAGGCTGCAGCTACAGCATGCACGTACAC +
Preference number: 1 (lower is better)
Translates to: VMATVSKALYFPKVG*RRRDAGCSYSMHVH
Trigger: GTGTACGTGCATGCTGTAGCTGCAGCCTGCATCCCTTCGCCTGCAGCCTACTTTGGGGAAATAAAGTGCCTTACTGACTGTAGCCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR CCA 90 bp TCTCAAGGTTGGACTGTCTCAGAGATAAACAAAGAGGAATCCTTTTaGCTTAGAAGCCAACTGGCTTACTCAGACTTCCTCCCCTTCCTA +
Preference number: 1 (lower is better)
Translates to: SQGWTVSEINKEESF*LRSQLAYSDFLPFL
Trigger: TAGGAAGGGGAGGAAGTCTGAGTAAGCCAGTTGGCTTCTAAGCCAAAAGGATTCCTCTTTGTTTATCTCTGAGACAGTCCAACCTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR CCA 90 bp CCCTTGGCTTTCTCCTGCAGGCTTCTTGGCTGTTATGGACCCGCATaGAGTTTAATTATGCTTAGCATATATTTTTGGCATACTAGGATT +
Preference number: 1 (lower is better)
Translates to: PLAFSCRLLGCYGPA*SLIMLSIYFWHTRI
Trigger: AATCCTAGTATGCCAAAAATATATGCTAAGCATAATTAAACTCCATGCGGGTCCATAACAGCCAAGAAGCCTGCAGGAGAAAGCCAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR TCA 90 bp TTTGCACAAATGGATGGCTGCATGAACAGCTCTTGTAAATTGCTCTaGGTCCACACCAATAGAAACCTGCACTCATTCTATAGCTACAGA +
Preference number: 1 (lower is better)
Translates to: FAQMDGCMNSSCKLL*VHTNRNLHSFYSYR
Trigger: TCTGTAGCTATAGAATGAGTGCAGGTTTCTATTGGTGTGGACTCAGAGCAATTTACAAGAGCTGTTCATGCAGCCATCCATTTGTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR TCA 90 bp CCTCTTGAATCTTCTTACCCTATTTTGCACAAATGGATGGCTGCATaGACAGCTCTTGTAAATTGCTCTGAGTCCACACCAATAGAAACC +
Preference number: 1 (lower is better)
Translates to: PLESSYPILHKWMAA*TALVNCSESTPIET
Trigger: GGTTTCTATTGGTGTGGACTCAGAGCAATTTACAAGAGCTGTTCATGCAGCCATCCATTTGTGCAAAATAGGGTAAGAAGATTCAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGCCTCTCAGCACGCATaGGGTGTTCTGCGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSASQHA*GVLRRE
Trigger: TTCCCTCCGCAGAACACCCCATGCGTGCTGAGAGGC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCACTGAACGTCTGCCTTaGAGGGGAGGGAGGATCCCT +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSTERLP*RGGRIP
Trigger: AGGGATCCTCCCTCCCCTTCAAGGCAGACGTTCAGT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCCCAGGAGAGTGTGCTaGGCAAAGCTGGCTCTTGAG +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSPRRVC*AKLALE
Trigger: CTCAAGAGCCAGCTTTGCTCAGCACACTCTCCTGGG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCAAAATTTGGCAGGCTaGGGGAACAACTCGGCCCCC +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSQNLAG*GNNSAP
Trigger: GGGGGCCGAGTTGTTCCCCCAGCCTGCCAAATTTTG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGAGGGAACTGCCCTTaGCTTTCTCCTGCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGGNCP*LSPAGF
Trigger: GAAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTCC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTTCTGCGGAGGGAACTaGCCTTGGCTTTCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSFCGGN*PWLSPA
Trigger: TGCAGGAGAAAGCCAAGGGCAGTTCCCTCCGCAGAA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCCCAGTAGTAAGGCATaGTGTGCTCTCCAGTGGGGT +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSPSSKA*CALQWG
Trigger: ACCCCACTGGAGAGCACAGCATGCCTTACTACTGGG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCATACCAGGGTCTAACTaGGAGCCCGATGGCCTCCAT +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSIPGSN*EPDGLH
Trigger: ATGGAGGCCATCGGGCTCCCAGTTAGACCCTGGTAT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTCCTGCAGGCTTCTTaGCTGTTATGGACCCGCATG +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLLQAS*LLWTRM
Trigger: CATGCGGGTCCATAACAGCCAAGAAGCCTGCAGGAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGCTTGCATAGTGCTTaGCTGCGCAGTTTGAGACAG +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGLHSA*LRSLRQ
Trigger: CTGTCTCAAACTGCGCAGGCAAGCACTATGCAAGCC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTGTGTGCCCCTGACCTaGCTGATAAGAGGCAGAACA +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSCVPLT*LIRGRT
Trigger: TGTTCTGCCTCTTATCAGCCAGGTCAGGGGCACACA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR CAA 90 bp ATGGGATGCAGCGTGATGCTGTCAGGGTTGTCTTCTCCTCTGGCTTaGTCACTTAAGCCATGTGTGCCCCTGACCTGGCTGATAAGAGGC +
Preference number: 2 (lower is better)
Translates to: MGCSVMLSGLSSPLA*SLKPCVPLTWLIRG
Trigger: GCCTCTTATCAGCCAGGTCAGGGGCACACATGGCTTAAGTGACAAAGCCAGAGGAGAAGACAACCCTGACAGCATCACGCTGCATCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAGGGCCCTTTGCAGATaGAGCCCCGCTTTTGAAAAA +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSRALCR*SPAFEK
Trigger: TTTTTCAAAAGCGGGGCTTCATCTGCAAAGGGCCCT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCACATAGACCAAGGATaGCCCAGTAGTAAGGCATGC +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSHIDQG*PSSKAC
Trigger: GCATGCCTTACTACTGGGTCATCCTTGGTCTATGTG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTTCTGTATTCCTCATaGGAATGGGCTCCCAAGCAG +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLLYSS*EWAPKQ
Trigger: CTGCTTGGGAGCCCATTCGCATGAGGAATACAGAAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTTTGTACTGAACGTCTaGCTTGAAGGGGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSFVLNV*LEGEGG
Trigger: TCCTCCCTCCCCTTCAAGGCAGACGTTCAGTACAAA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCCCTTGGCTTTCTCCTaGAGGCTTCTTGGCTGTTAT +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSPLAFS*RLLGCY
Trigger: ATAACAGCCAAGAAGCCTGCAGGAGAAAGCCAAGGG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGAAAAGACTCCATTCTaGATCCCACCCTTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSEKTPF*IPPLVS
Trigger: GGAGACCAAGGGTGGGATCCAGAATGGAGTCTTTTC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGGGGAGAGCTCCTCTaGAACAAAACTCCTACCAAA +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGGELL*NKTPTK
Trigger: TTTGGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTGCCTCCGTTTCATGTaGGTTTTGGTTATGGCCCAT +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSCLRFM*VLVMAH
Trigger: ATGGGCCATAACCAAAACTCACATGAAACGGAGGCA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCATAAACGCTGCTTGCTaGAGGTTCATCTACTCGCAG +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSINAAC*RFIYSQ
Trigger: CTGCGAGTAGATGAACCTGCAGCAAGCAGCGTTTAT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCACCATAAACGCTGCTTaGTGCAGGTTCATCTACTCG +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSTINAA*CRFIYS
Trigger: CGAGTAGATGAACCTGCAGCAAGCAGCGTTTATGGT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGAAGAGACCAGATTATaGACGCGTCTCTCTCTTTCG +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSEETRL*TRLSLS
Trigger: CGAAAGAGAGAGACGCGTCCATAATCTGGTCTCTTC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGAAGGATCAAAATTTaGCAGGCTGGGGGAACAACT +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGRIKI*QAGGTT
Trigger: AGTTGTTCCCCCAGCCTGCCAAATTTTGATCCTTCC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCAAAATAAGGCCTCCTaGAAGAACAGCCCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSQNKAS*KNSPFF
Trigger: GAAGAAGGGGCTGTTCTTCCAGGAGGCCTTATTTTG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCACTGAACGTCTGCCTTaGAGGGGAGGGAGGATCCCT +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTTERLP*RGGRIP
Trigger: AGGGATCCTCCCTCCCCTTCAAGGCAGACGTTCAGT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCATAAATGTTTGTACTaGACGTCTGCCTTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSHKCLY*TSALKG
Trigger: CCCCTTCAAGGCAGACGTTCAGTACAAACATTTATG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGAAAAACTTCAAGATaGAAGGGCCCTTTGCAGATG +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGKTSR*KGPLQM
Trigger: CATCTGCAAAGGGCCCTTTCATCTTGAAGTTTTTCC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCACCTGGTACCTAAGTaGAAATTACGACATCTGAGC +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSHLVPK*KLRHLS
Trigger: GCTCAGATGTCGTAATTTGCACTTAGGTACCAGGTG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAAGCACCATAAACGCTaGTTGCTGCAGGTTCATCTA +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSKHHKR*LLQVHL
Trigger: TAGATGAACCTGCAGCAAGCAGCGTTTATGGTGCTT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTCTTGAGAAAACTCTaGCTAGCTTACTTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLLRKL*LAYLLA
Trigger: AGCCAGCAAGTAAGCTAGCCAGAGTTTTCTCAAGAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGCTTCTTGGCTGTTATaGACCCGCATGGAGTTTAAT +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSASWLL*TRMEFN
Trigger: ATTAAACTCCATGCGGGTCCATAACAGCCAAGAAGC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAACCTCTTTGCTAACTaGATGCCTCTAAGAAGTGGA +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSNLFAN*MPLRSG
Trigger: TCCACTTCTTAGAGGCATTCAGTTAGCAAAGAGGTT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTCAACCCTCATACTATaGAACAAGGCAGAATCTGTG +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSSTLIL*NKAESV
Trigger: CACAGATTCTGCCTTGTTTCATAGTATGAGGGTTGA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGCAAATTACGACATCTaGGCCTACCGCATAAATGTT +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSANYDI*AYRINV
Trigger: AACATTTATGCGGTAGGCTCAGATGTCGTAATTTGC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCATACCAGGGTCTAACTaGGAGCCCGATGGCCTCCAT +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTIPGSN*EPDGLH
Trigger: ATGGAGGCCATCGGGCTCCCAGTTAGACCCTGGTAT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGGCTTGCATAGTGCTTaGCTGCGCAGTTTGAGACAG +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTGLHSA*LRSLRQ
Trigger: CTGTCTCAAACTGCGCAGGCAAGCACTATGCAAGCC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTGTTATGGACCCGCATaGAGTTTAATTATGCTTAGC +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSCYGPA*SLIMLS
Trigger: GCTAAGCATAATTAAACTCCATGCGGGTCCATAACA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGCCTCTCAGCACGCATaGGGTGTTCTGCGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTASQHA*GVLRRE
Trigger: TTCCCTCCGCAGAACACCCCATGCGTGCTGAGAGGC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGTTGTGAGGTATTATaGAAACAAAAGCGTGAATCA +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGCEVL*KQKRES
Trigger: TGATTCACGCTTTTGTTTTCATAATACCTCACAACC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAGGGCCCTTTGCAGATaGAGCCCCGCTTTTGAAAAA +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTRALCR*SPAFEK
Trigger: TTTTTCAAAAGCGGGGCTTCATCTGCAAAGGGCCCT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCCCAGGAGAGTGTGCTaGGCAAAGCTGGCTCTTGAG +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTPRRVC*AKLALE
Trigger: CTCAAGAGCCAGCTTTGCTCAGCACACTCTCCTGGG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTTTTCTAAGAAGAAATaGCAAGGCCACATTACCCTT +
Preference number: 2 (lower is better)
Translates to: GSAAPSEELPILLAMGCSFSKKK*QGHITL
Trigger: AAGGGTAATGTGGCCTTGGCATTTCTTCTTAGAAAA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTTCTGTATTCCTCATaGGAATGGGCTCCCAAGCAG +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLLYSS*EWAPKQ
Trigger: CTGCTTGGGAGCCCATTCGCATGAGGAATACAGAAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTTTGTACTGAACGTCTaGCTTGAAGGGGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTFVLNV*LEGEGG
Trigger: TCCTCCCTCCCCTTCAAGGCAGACGTTCAGTACAAA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAGCTTACTTGCTGGCTaGTCCACTTCCCTCTCCAAA +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTSLLAG*STSLSK
Trigger: TTTGGAGAGGGAAGTGGAGCAGCCAGCAAGTAAGCT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTAGAGGTGCTAGACTaGAGGGAAGCGCAGCTCCGT +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLEVLD*REAQLR
Trigger: ACGGAGCTGCGCTTCCCTGCAGTCTAGCACCTCTAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGAAAAGACTCCATTCTaGATCCCACCCTTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTEKTPF*IPPLVS
Trigger: GGAGACCAAGGGTGGGATCCAGAATGGAGTCTTTTC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGAGGGAACTGCCCTTaGCTTTCTCCTGCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGGNCP*LSPAGF
Trigger: GAAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTCC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGAAAAAGCTCCAAGATaGGGATCTCCAAACAGCCTG +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTEKAPR*GSPNSL
Trigger: CAGGCTGTTTGGAGATCCTCATCTTGGAGCTTTTTC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAAGCGCAGCTCCGTCTaGAGAGTTGCCAATCCTGCT +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTKRSSV*RVANPA
Trigger: AGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCATAAACGCTGCTTGCTaGAGGTTCATCTACTCGCAG +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTINAAC*RFIYSQ
Trigger: CTGCGAGTAGATGAACCTGCAGCAAGCAGCGTTTAT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCACCATAAACGCTGCTTaGTGCAGGTTCATCTACTCG +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTTINAA*CRFIYS
Trigger: CGAGTAGATGAACCTGCAGCAAGCAGCGTTTATGGT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTTCTGCGGAGGGAACTaGCCTTGGCTTTCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTFCGGN*PWLSPA
Trigger: TGCAGGAGAAAGCCAAGGGCAGTTCCCTCCGCAGAA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCCCAGTAGTAAGGCATaGTGTGCTCTCCAGTGGGGT +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTPSSKA*CALQWG
Trigger: ACCCCACTGGAGAGCACAGCATGCCTTACTACTGGG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGAAGAGACCAGATTATaGACGCGTCTCTCTCTTTCG +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTEETRL*TRLSLS
Trigger: CGAAAGAGAGAGACGCGTCCATAATCTGGTCTCTTC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCATACCAGGGTCTAACTaGGAGCCCGATGGCCTCCAT +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTIPGSN*EPDGLH
Trigger: ATGGAGGCCATCGGGCTCCCAGTTAGACCCTGGTAT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTGCTGTGCTCTCCAGTaGGGTCCTGAGGCAGTTCAA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTCCALQ*GPEAVQ
Trigger: TTGAACTGCCTCAGGACCCCACTGGAGAGCACAGCA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCATAAATGTTTGTACTaGACGTCTGCCTTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTHKCLY*TSALKG
Trigger: CCCCTTCAAGGCAGACGTTCAGTACAAACATTTATG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGGAAAAACTTCAAGATaGAAGGGCCCTTTGCAGATG +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTGKTSR*KGPLQM
Trigger: CATCTGCAAAGGGCCCTTTCATCTTGAAGTTTTTCC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCACCTGGTACCTAAGTaGAAATTACGACATCTGAGC +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTHLVPK*KLRHLS
Trigger: GCTCAGATGTCGTAATTTGCACTTAGGTACCAGGTG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAAGCACCATAAACGCTaGTTGCTGCAGGTTCATCTA +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTKHHKR*LLQVHL
Trigger: TAGATGAACCTGCAGCAAGCAGCGTTTATGGTGCTT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGCTTGCATAGTGCTTaGCTGCGCAGTTTGAGACAG +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGLHSA*LRSLRQ
Trigger: CTGTCTCAAACTGCGCAGGCAAGCACTATGCAAGCC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTCTTGAGAAAACTCTaGCTAGCTTACTTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLLRKL*LAYLLA
Trigger: AGCCAGCAAGTAAGCTAGCCAGAGTTTTCTCAAGAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTGTGTGCCCCTGACCTaGCTGATAAGAGGCAGAACA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTCVPLT*LIRGRT
Trigger: TGTTCTGCCTCTTATCAGCCAGGTCAGGGGCACACA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAACCTCTTTGCTAACTaGATGCCTCTAAGAAGTGGA +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTNLFAN*MPLRSG
Trigger: TCCACTTCTTAGAGGCATTCAGTTAGCAAAGAGGTT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGCAAATTACGACATCTaGGCCTACCGCATAAATGTT +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTANYDI*AYRINV
Trigger: AACATTTATGCGGTAGGCTCAGATGTCGTAATTTGC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAGGGCCCTTTGCAGATaGAGCCCCGCTTTTGAAAAA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTRALCR*SPAFEK
Trigger: TTTTTCAAAAGCGGGGCTTCATCTGCAAAGGGCCCT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCCAATTCAGTGTGATTaGAAACCCGACCGTTTAGTA +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTPIQCD*KPDRLV
Trigger: TACTAAACGGTCGGGTTTTCAATCACACTGAATTGG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCACATAGACCAAGGATaGCCCAGTAGTAAGGCATGC +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTHIDQG*PSSKAC
Trigger: GCATGCCTTACTACTGGGTCATCCTTGGTCTATGTG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTTTGTACTGAACGTCTaGCTTGAAGGGGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTFVLNV*LEGEGG
Trigger: TCCTCCCTCCCCTTCAAGGCAGACGTTCAGTACAAA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAGCTTACTTGCTGGCTaGTCCACTTCCCTCTCCAAA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSLLAG*STSLSK
Trigger: TTTGGAGAGGGAAGTGGAGCAGCCAGCAAGTAAGCT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGAAAAGACTCCATTCTaGATCCCACCCTTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTEKTPF*IPPLVS
Trigger: GGAGACCAAGGGTGGGATCCAGAATGGAGTCTTTTC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCATTCCCCTGCCCTCTTaGAGAGAGTCATCTGATCCT +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTIPLPS*RESSDP
Trigger: AGGATCAGATGACTCTCTCCAAGAGGGCAGGGGAAT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGAAAAAGCTCCAAGATaGGGATCTCCAAACAGCCTG +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTEKAPR*GSPNSL
Trigger: CAGGCTGTTTGGAGATCCTCATCTTGGAGCTTTTTC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCATAAACGCTGCTTGCTaGAGGTTCATCTACTCGCAG +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTINAAC*RFIYSQ
Trigger: CTGCGAGTAGATGAACCTGCAGCAAGCAGCGTTTAT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCACCATAAACGCTGCTTaGTGCAGGTTCATCTACTCG +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTTINAA*CRFIYS
Trigger: CGAGTAGATGAACCTGCAGCAAGCAGCGTTTATGGT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGAAGGATCAAAATTTaGCAGGCTGGGGGAACAACT +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGRIKI*QAGGTT
Trigger: AGTTGTTCCCCCAGCCTGCCAAATTTTGATCCTTCC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCAAAATAAGGCCTCCTaGAAGAACAGCCCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTQNKAS*KNSPFF
Trigger: GAAGAAGGGGCTGTTCTTCCAGGAGGCCTTATTTTG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGAAAAACTTCAAGATaGAAGGGCCCTTTGCAGATG +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGKTSR*KGPLQM
Trigger: CATCTGCAAAGGGCCCTTTCATCTTGAAGTTTTTCC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTTTTCTAAGAAGAAATaGCAAGGCCACATTACCCTT +
Preference number: 2 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTFSKKK*QGHITL
Trigger: AAGGGTAATGTGGCCTTGGCATTTCTTCTTAGAAAA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCACCTGGTACCTAAGTaGAAATTACGACATCTGAGC +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTHLVPK*KLRHLS
Trigger: GCTCAGATGTCGTAATTTGCACTTAGGTACCAGGTG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAAGCACCATAAACGCTaGTTGCTGCAGGTTCATCTA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTKHHKR*LLQVHL
Trigger: TAGATGAACCTGCAGCAAGCAGCGTTTATGGTGCTT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAAGACCAGGATAATTTaGAACCCCTTTAGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTKTRII*NPFSGR
Trigger: CCTCCCACTAAAGGGGTTCCAAATTATCCTGGTCTT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGCTTCTTGGCTGTTATaGACCCGCATGGAGTTTAAT +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTASWLL*TRMEFN
Trigger: ATTAAACTCCATGCGGGTCCATAACAGCCAAGAAGC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTCAACCCTCATACTATaGAACAAGGCAGAATCTGTG +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSTLIL*NKAESV
Trigger: CACAGATTCTGCCTTGTTTCATAGTATGAGGGTTGA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGCAAATTACGACATCTaGGCCTACCGCATAAATGTT +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTANYDI*AYRINV
Trigger: AACATTTATGCGGTAGGCTCAGATGTCGTAATTTGC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCCAATTCAGTGTGATTaGAAACCCGACCGTTTAGTA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTPIQCD*KPDRLV
Trigger: TACTAAACGGTCGGGTTTTCAATCACACTGAATTGG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTTGGAGAGAGTCATCTaGTCCTGCCTTATGTTCTTA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLERVI*SCLMFL
Trigger: TAAGAACATAAGGCAGGATCAGATGACTCTCTCCAA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGCACAAATGGATGGCTaGATGAACAGCTCTTGTAAA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTAQMDG*MNSSCK
Trigger: TTTACAAGAGCTGTTCATGCAGCCATCCATTTGTGC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAAAGAGGAATCCTTTTaGCTTAGAAGCCAACTGGCT +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTKEESF*LRSQLA
Trigger: AGCCAGTTGGCTTCTAAGCCAAAAGGATTCCTCTTT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTACAGAGGGTTTGTTaGCTTAAGGGGACTTTATCA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLQRVC*LKGTLS
Trigger: TGATAAAGTCCCCTTAAGCCAACAAACCCTCTGTAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTCTTGTAAATTGCTCTaGGTCCACACCAATAGAAAC +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSCKLL*VHTNRN
Trigger: GTTTCTATTGGTGTGGACTCAGAGCAATTTACAAGA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTGTTATGGACCCGCATaGAGTTTAATTATGCTTAGC +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTCYGPA*SLIMLS
Trigger: GCTAAGCATAATTAAACTCCATGCGGGTCCATAACA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAGCTATTCTCAAGGTTaGACTGTCTCAGAGATAAAC +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSYSQG*TVSEIN
Trigger: GTTTATCTCTGAGACAGTCCAACCTTGAGAATAGCT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGTTGTGAGGTATTATaGAAACAAAAGCGTGAATCA +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGCEVL*KQKRES
Trigger: TGATTCACGCTTTTGTTTTCATAATACCTCACAACC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTTTTCTAAGAAGAAATaGCAAGGCCACATTACCCTT +
Preference number: 2 (lower is better)
Translates to: PSLKADTHECSIVVPEMTFSKKK*QGHITL
Trigger: AAGGGTAATGTGGCCTTGGCATTTCTTCTTAGAAAA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR CCA 72 bp AGCCCCTTCTTCAAGGAGCTCGCCTCTCAGCACGCATaGGGTGTTCTGCGGAGGGAACTGCCCTTGGCTTTC +
Preference number: 3 (lower is better)
Translates to: SPFFKELASQHA*GVLRRELPLAF
Trigger: GAAAGCCAAGGGCAGTTCCCTCCGCAGAACACCCCATGCGTGCTGAGAGGCGAGCTCCTTGAAGAAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR GCA 72 bp CCTCTCAGCACGCATGGGGTGTTCTGCGGAGGGAACTaGCCTTGGCTTTCTCCTGCAGGCTTCTTGGCTGTT +
Preference number: 3 (lower is better)
Translates to: PLSTHGVFCGGN*PWLSPAGFLAV
Trigger: AACAGCCAAGAAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTCCGCAGAACACCCCATGCGTGCTGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR GCA 72 bp AGGGCACAGTCTGGAGAGGCCCTAGAGGTGCTAGACTaGAGGGAAGCGCAGCTCCGTCTGAAGAGTTGCCAA +
Preference number: 3 (lower is better)
Translates to: RAQSGEALEVLD*REAQLRLKSCQ
Trigger: TTGGCAACTCTTCAGACGGAGCTGCGCTTCCCTGCAGTCTAGCACCTCTAGGGCCTCTCCAGACTGTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCGGAGGGAACTGCCCTaGGCTTTCTCCTGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: GSAAPSEELPILLAMGCSRRELP*AFSCRL
Trigger: AAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTCCG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR GCA 72 bp GGTGTTCTGCGGAGGGAACTGCCCTTGGCTTTCTCCTaGAGGCTTCTTGGCTGTTATGGACCCGCATGGAGT +
Preference number: 3 (lower is better)
Translates to: GVLRRELPLAFS*RLLGCYGPAWS
Trigger: ACTCCATGCGGGTCCATAACAGCCAAGAAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTCCGCAGAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTCTCCTGCAGGCTTCTaGGCTGTTATGGACCCGCAT +
Preference number: 3 (lower is better)
Translates to: GSAAPSEELPILLAMGCSSPAGF*AVMDPH
Trigger: ATGCGGGTCCATAACAGCCAAGAAGCCTGCAGGAGA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGGAAGGATCAAAATTaGGCAGGCTGGGGGAACAAC +
Preference number: 3 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGKDQN*AGWGNN
Trigger: GTTGTTCCCCCAGCCTGCCAAATTTTGATCCTTCCC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGTGATGCTGTCAGGGTaGTCTTCTCCTCTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: GSAAPSEELPILLAMGCSVMLSG*SSPLAL
Trigger: CAAAGCCAGAGGAGAAGACAACCCTGACAGCATCAC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCACCATAAACGCTGCTaGCTGCAGGTTCATCTACTC +
Preference number: 3 (lower is better)
Translates to: GSAAPSEELPILLAMGCSHHKRC*LQVHLL
Trigger: GAGTAGATGAACCTGCAGCAAGCAGCGTTTATGGTG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGAGCAAAGCTGGCTCTaGAGAAAACTCTGGCTAGCT +
Preference number: 3 (lower is better)
Translates to: GSAAPSEELPILLAMGCSEQSWL*RKLWLA
Trigger: AGCTAGCCAGAGTTTTCTCAAGAGCCAGCTTTGCTC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR GCA 72 bp CCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATaGAGCGTGATGCTGTCAGGGTTGTCTTCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: PSEELPILLAMG*SVMLSGLSSPL
Trigger: CAGAGGAGAAGACAACCCTGACAGCATCACGCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR CCA 72 bp CTGGCTTTGTCACTTAAGCCATGTGTGCCCCTGACCTaGCTGATAAGAGGCAGAACAGAGCCTCCAGTACAG +
Preference number: 3 (lower is better)
Translates to: LALSLKPCVPLT*LIRGRTEPPVQ
Trigger: CTGTACTGGAGGCTCTGTTCTGCCTCTTATCAGCCAGGTCAGGGGCACACATGGCTTAAGTGACAAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGATGAAGCCCCGCTTTaGAAAAAGCTCCAAGATGAG +
Preference number: 3 (lower is better)
Translates to: GSAAPSEELPILLAMGCSDEAPL*KKLQDE
Trigger: CTCATCTTGGAGCTTTTTCAAAAGCGGGGCTTCATC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCATCCAGGATTCCTTCTaGTGTTTAAGCAGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: GSAAPSEELPILLAMGCSIQDSF*CLSRSR
Trigger: CCTGCTCCTGCTTAAACACAAGAAGGAATCCTGGAT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTCTTCTCCTCTGGCTTaGTCACTTAAGCCATGTGTG +
Preference number: 3 (lower is better)
Translates to: GSAAPSEELPILLAMGCSSSPLA*SLKPCV
Trigger: CACACATGGCTTAAGTGACAAAGCCAGAGGAGAAGA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR TCA 72 bp AACAGAGCCTCCAGTACAGAGCACATAGACCAAGGATaGCCCAGTAGTAAGGCATGCTGTGCTCTCCAGTGG +
Preference number: 3 (lower is better)
Translates to: NRASSTEHIDQG*PSSKACCALQW
Trigger: CCACTGGAGAGCACAGCATGCCTTACTACTGGGTCATCCTTGGTCTATGTGCTCTGTACTGGAGGCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR CCA 72 bp GAGTGTGCTGAGCAAAGCTGGCTCTTGAGAAAACTCTaGCTAGCTTACTTGCTGGCTGCTCCACTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: ECAEQSWLLRKL*LAYLLAAPLPS
Trigger: AGAGGGAAGTGGAGCAGCCAGCAAGTAAGCTAGCCAGAGTTTTCTCAAGAGCCAGCTTTGCTCAGCACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTCTGGCTAGCTTACTaGCTGGCTGCTCCACTTCCC +
Preference number: 3 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLWLAY*LAAPLP
Trigger: GGGAAGTGGAGCAGCCAGCAAGTAAGCTAGCCAGAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR GCA 72 bp ACTTTATTTCCCCAAAGTAGGCTGCAGGCGAAGGGATaGAGGCTGCAGCTACAGCATGCACGTACACATTTG +
Preference number: 3 (lower is better)
Translates to: TLFPQSRLQAKG*RLQLQHARTHL
Trigger: CAAATGTGTACGTGCATGCTGTAGCTGCAGCCTGCATCCCTTCGCCTGCAGCCTACTTTGGGGAAATAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR CCA 72 bp GAGGGAACTGCCCTTGGCTTTCTCCTGCAGGCTTCTTaGCTGTTATGGACCCGCATGGAGTTTAATTATGCT +
Preference number: 3 (lower is better)
Translates to: EGTALGFLLQAS*LLWTRMEFNYA
Trigger: AGCATAATTAAACTCCATGCGGGTCCATAACAGCCAAGAAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCGGAGGGAACTGCCCTaGGCTTTCTCCTGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTRRELP*AFSCRL
Trigger: AAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTCCG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCACCATAAACGCTGCTaGCTGCAGGTTCATCTACTC +
Preference number: 3 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTHHKRC*LQVHLL
Trigger: GAGTAGATGAACCTGCAGCAAGCAGCGTTTATGGTG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTCTGGCTAGCTTACTaGCTGGCTGCTCCACTTCCC +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLWLAY*LAAPLP
Trigger: GGGAAGTGGAGCAGCCAGCAAGTAAGCTAGCCAGAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGATGAAGCCCCGCTTTaGAAAAAGCTCCAAGATGAG +
Preference number: 3 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTDEAPL*KKLQDE
Trigger: CTCATCTTGGAGCTTTTTCAAAAGCGGGGCTTCATC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTCTCCTGCAGGCTTCTaGGCTGTTATGGACCCGCAT +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSPAGF*AVMDPH
Trigger: ATGCGGGTCCATAACAGCCAAGAAGCCTGCAGGAGA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGGAAGGATCAAAATTaGGCAGGCTGGGGGAACAAC +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGKDQN*AGWGNN
Trigger: GTTGTTCCCCCAGCCTGCCAAATTTTGATCCTTCCC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGTGATGCTGTCAGGGTaGTCTTCTCCTCTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTVMLSG*SSPLAL
Trigger: CAAAGCCAGAGGAGAAGACAACCCTGACAGCATCAC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGAGCAAAGCTGGCTCTaGAGAAAACTCTGGCTAGCT +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTEQSWL*RKLWLA
Trigger: AGCTAGCCAGAGTTTTCTCAAGAGCCAGCTTTGCTC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGATGAAGCCCCGCTTTaGAAAAAGCTCCAAGATGAG +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTDEAPL*KKLQDE
Trigger: CTCATCTTGGAGCTTTTTCAAAAGCGGGGCTTCATC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCATCCAGGATTCCTTCTaGTGTTTAAGCAGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTIQDSF*CLSRSR
Trigger: CCTGCTCCTGCTTAAACACAAGAAGGAATCCTGGAT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTCTTCTCCTCTGGCTTaGTCACTTAAGCCATGTGTG +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSSPLA*SLKPCV
Trigger: CACACATGGCTTAAGTGACAAAGCCAGAGGAGAAGA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR CCA 72 bp TGGACTGTCTCAGAGATAAACAAAGAGGAATCCTTTTaGCTTAGAAGCCAACTGGCTTACTCAGACTTCCTC +
Preference number: 3 (lower is better)
Translates to: WTVSEINKEESF*LRSQLAYSDFL
Trigger: GAGGAAGTCTGAGTAAGCCAGTTGGCTTCTAAGCCAAAAGGATTCCTCTTTGTTTATCTCTGAGACAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR TCA 72 bp ATGGATGGCTGCATGAACAGCTCTTGTAAATTGCTCTaGGTCCACACCAATAGAAACCTGCACTCATTCTAT +
Preference number: 3 (lower is better)
Translates to: MDGCMNSSCKLL*VHTNRNLHSFY
Trigger: ATAGAATGAGTGCAGGTTTCTATTGGTGTGGACTCAGAGCAATTTACAAGAGCTGTTCATGCAGCCATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTCTTCTTACCCTATTTaGCACAAATGGATGGCTGCA +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSSYPI*HKWMAA
Trigger: TGCAGCCATCCATTTGTGCAAAATAGGGTAAGAAGA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR CCA 72 bp TTCTCCTGCAGGCTTCTTGGCTGTTATGGACCCGCATaGAGTTTAATTATGCTTAGCATATATTTTTGGCAT +
Preference number: 3 (lower is better)
Translates to: FSCRLLGCYGPA*SLIMLSIYFWH
Trigger: ATGCCAAAAATATATGCTAAGCATAATTAAACTCCATGCGGGTCCATAACAGCCAAGAAGCCTGCAGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAAGCTATTCTCAAGGTaGGACTGTCTCAGAGATAAA +
Preference number: 3 (lower is better)
Translates to: PSLKADTHECSIVVPEMTKLFSR*DCLRDK
Trigger: TTTATCTCTGAGACAGTCCAACCTTGAGAATAGCTT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGTCCCGCACGGCCCTaGGGACCGGGTCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGPARP*GPGPPR
Trigger: ACGAGGTGGACCCGGTCCGCAGGGCCGTGCGGGACC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCGTCTCGGAGCAGGTTaGGGTCCCGCACGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSRLGAG*GPARPC
Trigger: GCAGGGCCGTGCGGGACCGCAACCTGCTCCGAGACG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGCAGAGCCTCGGGGCTaGCTCACTCGCACCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSAEPRG*LTRTGP
Trigger: AGGACCGGTGCGAGTGAGGCAGCCCCGAGGCTCTGC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261254.8
ENST00000675880.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGCGAGGATTGGGTGGTaGGCGAGCAGAGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSARIGW*ASRASG
Trigger: CCCCGAGGCTCTGCTCGCCCACCACCCAATCCTCGC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261254.8
ENST00000675880.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTGCCTCCCAGCCAGGTaGTTCCGCGGTCGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSCLPAR*FRGRLK
Trigger: CTTGAGCCGACCGCGGAATCACCTGGCTGGGAGGCA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAGTCCGCCAGGCCTGTaGATCCGCACTCCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSSPPGL*IRTPFG
Trigger: GCCGAAGGGAGTGCGGATGCACAGGCCTGGCGGACT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGAGGCGAGGATTGGGTaGTGGGCGAGCAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSEARIG*WASRAS
Trigger: CGAGGCTCTGCTCGCCCACCACCCAATCCTCGCCTC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261254.8
ENST00000675880.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCACCGGGTCCACCTCGTaGCACAGCAGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSTGSTS*HSSSMA
Trigger: GGCCATGGAGCTGCTGTGCCACGAGGTGGACCCGGT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAGCGCTCCTCGATGGTaGGCAGGTTCTGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSSAPRW*AGSAGR
Trigger: GCGTCCTGCAGAACCTGCTCACCATCGAGGAGCGCT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCACGGGGCTGGATTACTaGGGCGGCAGATGCGACAGG +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSTGLDY*GGRCDR
Trigger: CCTGTCGCATCTGCCGCCTCAGTAATCCAGCCCCGT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGCCCCTCTCCCTCCTaGTTTCCCCGGCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGPSPS*FPRPGK
Trigger: TTTTCCAGGCCGGGGAAAGCAGGAGGGAGAGGGGCC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261254.8
ENST00000675880.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAAGGGAGGCGAGGATTaGGTGGTGGGCGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSKGGED*VVGEQS
Trigger: GCTCTGCTCGCCCACCACCCAATCCTCGCCTCCCTT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261254.8
ENST00000675880.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCAGATGCGACAGGCGTaGGTTAAGAAGGCGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSQMRQA*VKKASA
Trigger: GGCGCTCGCCTTCTTAACTCACGCCTGTCGCATCTG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCATGGTGAGCAGGTTCTaGAGGACGCGGTCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSMVSRF*RTRSSR
Trigger: CCGAGACGACCGCGTCCTGCAGAACCTGCTCACCAT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCGGCTTGGACGGGGCTaGATTACTGAGGCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSRLGRG*ITEAAD
Trigger: ATCTGCCGCCTCAGTAATCCAGCCCCGTCCAAGCCG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCACGGGGGAGCAGGGTaGGTGGGGACGGGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTHGGAG*VGTGSA
Trigger: CGCACTGCCCGTCCCCACCCACCCTGCTCCCCCGTG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCGTCTCGGAGCAGGTTaGGGTCCCGCACGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTRLGAG*GPARPC
Trigger: GCAGGGCCGTGCGGGACCGCAACCTGCTCCGAGACG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTAGAGGTGCTAGACTaGAGGGAAGCGCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLEVLD*REAQLR
Trigger: ACGGAGCTGCGCTTCCCTGCAGTCTAGCACCTCTAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTGCAGGCGAAGGGATaGAGGCTGCAGCTACAGCAT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLQAKG*RLQLQH
Trigger: ATGCTGTAGCTGCAGCCTGCATCCCTTCGCCTGCAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTTCCCCAAAGTAGGCTaGAGGCGAAGGGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSFPKVG*RRRDAG
Trigger: GCCTGCATCCCTTCGCCTGCAGCCTACTTTGGGGAA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGACGGGCAGTGCGATTaGAGGTGTTCACTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSDGQCD*RCSLAS
Trigger: GGAAGCGAGTGAACACCTGCAATCGCACTGCCCGTC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCCTTCTGCACGCACTTaGAGTAGGAGCACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSPSART*SRSTAE
Trigger: TTCCGCAGTGCTCCTACTTCAAGTGCGTGCAGAAGG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGAGCGGGTAGTGACTaGGTTCAGGCTCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGAGSD*VQAQKW
Trigger: CCATTTCTGAGCCTGAACTCAGTCACTACCCGCTCC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTCACTTCCTCATCCTaGTGGAGCCCACAGATGGCT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLTSSS*WSPQMA
Trigger: AGCCATCTGTGGGCTCCAGCAGGATGAGGAAGTGAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTGCTGTGCTCTCCAGTaGGGTCCTGAGGCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSCCALQ*GPEAVQ
Trigger: TTGAACTGCCTCAGGACCCCACTGGAGAGCACAGCA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
3UTR CAA 72 bp GCTAGACTGCAGGGAAGCGCAGCTCCGTCTGAAGAGTaGCCAATCCTGCTAGCAATGGGATGCAGCGTGATG +
Preference number: 4 (lower is better)
Translates to: ARLQGSAAPSEE*PILLAMGCSVM
Trigger: CATCACGCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCCCTGCAGTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGCTCCTGGCAAGCTTTaGGACAATCCACGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSAPGKL*DNPRLC
Trigger: ACACAGACGTGGATTGTCTCAAAGCTTGCCAGGAGC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGTCCCGCACGGCCCTaGGGACCGGGTCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGPARP*GPGPPR
Trigger: ACGAGGTGGACCCGGTCCGCAGGGCCGTGCGGGACC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTCCCACACTTCCAGTTaGGATCATCGACGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSSHTSS*DHRRWV
Trigger: TACCCACCGTCGATGATCGCAACTGGAAGTGTGGGA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGGCCCCTCTCCCTCCTaGTTTCCCCGGCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTGPSPS*FPRPRD
Trigger: ATCTCTGGGCCGGGGAAAGCAGGAGGGAGAGGGGCC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000676279.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGTTCATCCTCCGACTTaGATCCGTCACGTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSVHPPT*IRHVGP
Trigger: AGGACCAACGTGACGGATCCAAGTCGGAGGATGAAC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTCTTTCGGCCCAACTaGCATCCTCACAGGTCGATA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLFRPN*HPHRSI
Trigger: TATCGACCTGTGAGGATGCCAGTTGGGCCGAAAGAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGCCCGATGATTTGCTaGGGATGTAAGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGPMIC*GCKSWP
Trigger: TGGCCAACTCTTACATCCCCAGCAAATCATCGGGCC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTGCTTTCCCCGGCCTaGAGGATGCCTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLLSPA*RMPPSQ
Trigger: CTGGCTGGGAGGCATCCTCCAGGCCGGGGAAAGCAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676411.1
3UTR CAA 72 bp AGCGTGATGCTGTCAGGGTTGTCTTCTCCTCTGGCTTaGTCACTTAAGCCATGTGTGCCCCTGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SVMLSGLSSPLA*SLKPCVPLTWL
Trigger: CAGCCAGGTCAGGGGCACACATGGCTTAAGTGACAAAGCCAGAGGAGAAGACAACCCTGACAGCATCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAGCGCTCCTCGATGGTaGGCAGGTTCTGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTSAPRW*AGSAGR
Trigger: GCGTCCTGCAGAACCTGCTCACCATCGAGGAGCGCT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGGCCCCTCTCCCTCCTaGTTTCCCCGGCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTGPSPS*FPRPGK
Trigger: TTTTCCAGGCCGGGGAAAGCAGGAGGGAGAGGGGCC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261254.8
ENST00000675880.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAGGTCTGAGCATGCTTaGGGATCAGAGACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSRSEHA*GSETAS
Trigger: AGAAGCTGTCTCTGATCCGCAAGCATGCTCAGACCT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGCCTCAATCTGCTCCTaGCAAGCTTTGAGACAATCC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSASICS*QALRQS
Trigger: GGATTGTCTCAAAGCTTGCCAGGAGCAGATTGAGGC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCATTCCCCTGCCCTCTTaGAGAGAGTCATCTGATCCT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSIPLPS*RESSDP
Trigger: AGGATCAGATGACTCTCTCCAAGAGGGCAGGGGAAT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTTCTCCGTGGAGGGATaGACGGTCAATCAAAACCGA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSFSVEG*TVNQNR
Trigger: TCGGTTTTGATTGACCGTCCATCCCTCCACGGAGAA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCCGTCACGTTGGTCCTaGCGGTACTGCTGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTPSRWS*RYCCRL
Trigger: TAGCCTGCAGCAGTACCGTCAGGACCAACGTGACGG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGAAAAAGCTCCAAGATaGGGATCTCCAAACAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSEKAPR*GSPNSL
Trigger: CAGGCTGTTTGGAGATCCTCATCTTGGAGCTTTTTC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAATCCAATGGCCCGATaGTTTGCTGGGGATGTAAGA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSNPMAR*FAGDVR
Trigger: TCTTACATCCCCAGCAAATCATCGGGCCATTGGATT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCACTTTCTAACATCCTaGCCAAACAGACACCCACAC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSHFLTS*PNRHPH
Trigger: GTGTGGGTGTCTGTTTGGTCAGGATGTTAGAAAGTG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCATGGTGAGCAGGTTCTaGAGGACGCGGTCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTMVSRF*RTRSSR
Trigger: CCGAGACGACCGCGTCCTGCAGAACCTGCTCACCAT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAATGGCCCGATGATTTaGTGGGGATGTAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSNGPMI*WGCKSW
Trigger: CCAACTCTTACATCCCCAGCAAATCATCGGGCCATT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGGTGGGGACGGGCAGTaGGATTGCAGGTGTTCACTC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTGGDGQ*DCRCSL
Trigger: GAGTGAACACCTGCAATCGCACTGCCCGTCCCCACC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGCCCCTCTCCCTCCTaGTTTCCCCGGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGPSPS*FPRPGG
Trigger: TCCTCCAGGCCGGGGAAAGCAGGAGGGAGAGGGGCC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGCGAGGATTGGGTGGTaGGCGAGCAGAGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTARIGW*ASRASG
Trigger: CCCCGAGGCTCTGCTCGCCCACCACCCAATCCTCGC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261254.8
ENST00000675880.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGCCTCTCAGCACGCATaGGGTGTTCTGCGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTASQHA*GVLRRE
Trigger: TTCCCTCCGCAGAACACCCCATGCGTGCTGAGAGGC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCCCAGGAGAGTGTGCTaGGCAAAGCTGGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTPRRVC*AKLALE
Trigger: CTCAAGAGCCAGCTTTGCTCAGCACACTCTCCTGGG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTAGAGGTGCTAGACTaGAGGGAAGCGCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLEVLD*REAQLR
Trigger: ACGGAGCTGCGCTTCCCTGCAGTCTAGCACCTCTAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTGCAGGCGAAGGGATaGAGGCTGCAGCTACAGCAT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLQAKG*RLQLQH
Trigger: ATGCTGTAGCTGCAGCCTGCATCCCTTCGCCTGCAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTTCCCCAAAGTAGGCTaGAGGCGAAGGGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTFPKVG*RRRDAG
Trigger: GCCTGCATCCCTTCGCCTGCAGCCTACTTTGGGGAA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCACCGGGTCCACCTCGTaGCACAGCAGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTTGSTS*HSSSMA
Trigger: GGCCATGGAGCTGCTGTGCCACGAGGTGGACCCGGT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAAGACCAGGATAATTTaGAACCCCTTTAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSKTRII*NPFSGR
Trigger: CCTCCCACTAAAGGGGTTCCAAATTATCCTGGTCTT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCAAAATTTGGCAGGCTaGGGGAACAACTCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTQNLAG*GNNSAP
Trigger: GGGGGCCGAGTTGTTCCCCCAGCCTGCCAAATTTTG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGGAGGGAACTGCCCTTaGCTTTCTCCTGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTGGNCP*LSPAGF
Trigger: GAAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTCC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCCTTCTGCACGCACTTaGAGTAGGAGCACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTPSART*SRSTAE
Trigger: TTCCGCAGTGCTCCTACTTCAAGTGCGTGCAGAAGG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCCAATTCAGTGTGATTaGAAACCCGACCGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSPIQCD*KPDRLV
Trigger: TACTAAACGGTCGGGTTTTCAATCACACTGAATTGG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAAGCGCAGCTCCGTCTaGAGAGTTGCCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTKRSSV*RVANPA
Trigger: AGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTTGGAGAGAGTCATCTaGTCCTGCCTTATGTTCTTA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLERVI*SCLMFL
Trigger: TAAGAACATAAGGCAGGATCAGATGACTCTCTCCAA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAAGAAACTACATAACTaGGAGAGAGGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSKKLHN*ERGERE
Trigger: CTCTCTCTCTCCTCTCTCTCAGTTATGTAGTTTCTT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCCTTTTCGCATACACTaGTCATGCTACTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSPFRIH*SCYLSA
Trigger: TGCTGATAAGTAGCATGATCAGTGTATGCGAAAAGG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTCTTAAAAGGCAGCTaGCTATATCATGTCACCATC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLLKGS*LYHVTI
Trigger: GATGGTGACATGATATAGTCAGCTGCCTTTTAAGAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTCACTTCCTCATCCTaGTGGAGCCCACAGATGGCT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLTSSS*WSPQMA
Trigger: AGCCATCTGTGGGCTCCAGCAGGATGAGGAAGTGAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCCCAGTAGTAAGGCATaGTGTGCTCTCCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTPSSKA*CALQWG
Trigger: ACCCCACTGGAGAGCACAGCATGCCTTACTACTGGG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGCACAAATGGATGGCTaGATGAACAGCTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSAQMDG*MNSSCK
Trigger: TTTACAAGAGCTGTTCATGCAGCCATCCATTTGTGC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAGAAATGGGAGCCACTaGCTTCCCCTCGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTRNGSH*LPLGSP
Trigger: GGGGGAGCCGAGGGGAAGGCAGTGGCTCCCATTTCT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAAGGGAGGCGAGGATTaGGTGGTGGGCGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTKGGED*VVGEQS
Trigger: GCTCTGCTCGCCCACCACCCAATCCTCGCCTCCCTT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261254.8
ENST00000675880.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTCCTGCAGGCTTCTTaGCTGTTATGGACCCGCATG +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLLQAS*LLWTRM
Trigger: CATGCGGGTCCATAACAGCCAAGAAGCCTGCAGGAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTGCTGTGCTCTCCAGTaGGGTCCTGAGGCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTCCALQ*GPEAVQ
Trigger: TTGAACTGCCTCAGGACCCCACTGGAGAGCACAGCA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAAAGAGGAATCCTTTTaGCTTAGAAGCCAACTGGCT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSKEESF*LRSQLA
Trigger: AGCCAGTTGGCTTCTAAGCCAAAAGGATTCCTCTTT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGCTCCTGGCAAGCTTTaGGACAATCCACGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTAPGKL*DNPRLC
Trigger: ACACAGACGTGGATTGTCTCAAAGCTTGCCAGGAGC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCCGTCACGTTGGTCCTaGCGGTACTGCTGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTPSRWS*RYCCRL
Trigger: TAGCCTGCAGCAGTACCGTCAGGACCAACGTGACGG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTCTTGTAAATTGCTCTaGGTCCACACCAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSSCKLL*VHTNRN
Trigger: GTTTCTATTGGTGTGGACTCAGAGCAATTTACAAGA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAGCACCGCCTCAATCTaGTCCTGGCAAGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTSTASI*SWQALR
Trigger: TCTCAAAGCTTGCCAGGAGCAGATTGAGGCGGTGCT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCACAGCTCTTGTAAATTaGTCTGAGTCCACACCAATA +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSTALVN*SESTPI
Trigger: TATTGGTGTGGACTCAGAGCAATTTACAAGAGCTGT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTTCTTACCCTATTTTaGACAAATGGATGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLLTLF*TNGWLH
Trigger: ATGCAGCCATCCATTTGTGCAAAATAGGGTAAGAAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGTTCATCCTCCGACTTaGATCCGTCACGTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTVHPPT*IRHVGP
Trigger: AGGACCAACGTGACGGATCCAAGTCGGAGGATGAAC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTCTTTCGGCCCAACTaGCATCCTCACAGGTCGATA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLFRPN*HPHRSI
Trigger: TATCGACCTGTGAGGATGCCAGTTGGGCCGAAAGAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTGTGTGCCCCTGACCTaGCTGATAAGAGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTCVPLT*LIRGRT
Trigger: TGTTCTGCCTCTTATCAGCCAGGTCAGGGGCACACA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAGCTATTCTCAAGGTTaGACTGTCTCAGAGATAAAC +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSSYSQG*TVSEIN
Trigger: GTTTATCTCTGAGACAGTCCAACCTTGAGAATAGCT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGGCCCGATGATTTGCTaGGGATGTAAGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTGPMIC*GCKSWP
Trigger: TGGCCAACTCTTACATCCCCAGCAAATCATCGGGCC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAGAGCAATGAAGGTCTaGGCATGCTTGCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTRAMKV*ACLRIR
Trigger: TCTGATCCGCAAGCATGCTCAGACCTTCATTGCTCT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCACTGAACGTCTGCCTTaGAGGGGAGGGAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTTERLP*RGGRIP
Trigger: AGGGATCCTCCCTCCCCTTCAAGGCAGACGTTCAGT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCACATAGACCAAGGATaGCCCAGTAGTAAGGCATGC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTHIDQG*PSSKAC
Trigger: GCATGCCTTACTACTGGGTCATCCTTGGTCTATGTG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAGAATAACATGGACTTaGTATGGCATCACACTTGTT +
Preference number: 4 (lower is better)
Translates to: GSAAPSEELPILLAMGCSRITWT*YGITLV
Trigger: AACAAGTGTGATGCCATATCAAGTCCATGTTATTCT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCATGCTGGTGACTTCCTaGGATCCTTCCTCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTMLVTS*DPSSGG
Trigger: GCCACCGGAGGAAGGATCTCAGGAAGTCACCAGCAT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675880.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCCCTTGGCTTTCTCCTaGAGGCTTCTTGGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTPLAFS*RLLGCY
Trigger: ATAACAGCCAAGAAGCCTGCAGGAGAAAGCCAAGGG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTTCCCCAAAGTAGGCTaGAGGCGAAGGGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTFPKVG*RRRDAG
Trigger: GCCTGCATCCCTTCGCCTGCAGCCTACTTTGGGGAA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCACCCGACTGGCAAAATaGGAGGGGACACATAAATCC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTTRLAK*EGTHKS
Trigger: GGATTTATGTGTCCCCTCGCATTTTGCCAGTCGGGT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGCCTCAATCTGCTCCTaGCAAGCTTTGAGACAATCC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTASICS*QALRQS
Trigger: GGATTGTCTCAAAGCTTGCCAGGAGCAGATTGAGGC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGGGGGAGAGCTCCTCTaGAACAAAACTCCTACCAAA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTGGELL*NKTPTK
Trigger: TTTGGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCAAAATTTGGCAGGCTaGGGGAACAACTCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTQNLAG*GNNSAP
Trigger: GGGGGCCGAGTTGTTCCCCCAGCCTGCCAAATTTTG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCATTCCCCTGCCCTCTTaGAGAGAGTCATCTGATCCT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTIPLPS*RESSDP
Trigger: AGGATCAGATGACTCTCTCCAAGAGGGCAGGGGAAT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGTTTGTGTTTCTCCGTaGAGGGATGGACGGTCAATC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTVCVSP*RDGRSI
Trigger: GATTGACCGTCCATCCCTCCACGGAGAAACACAAAC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCCTTCTGCACGCACTTaGAGTAGGAGCACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTPSART*SRSTAE
Trigger: TTCCGCAGTGCTCCTACTTCAAGTGCGTGCAGAAGG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAATCCAATGGCCCGATaGTTTGCTGGGGATGTAAGA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTNPMAR*FAGDVR
Trigger: TCTTACATCCCCAGCAAATCATCGGGCCATTGGATT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCACTTTCTAACATCCTaGCCAAACAGACACCCACAC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTHFLTS*PNRHPH
Trigger: GTGTGGGTGTCTGTTTGGTCAGGATGTTAGAAAGTG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTCACTTCCTCATCCTaGTGGAGCCCACAGATGGCT +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLTSSS*WSPQMA
Trigger: AGCCATCTGTGGGCTCCAGCAGGATGAGGAAGTGAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAATGGCCCGATGATTTaGTGGGGATGTAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTNGPMI*WGCKSW
Trigger: CCAACTCTTACATCCCCAGCAAATCATCGGGCCATT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTCCTGCAGGCTTCTTaGCTGTTATGGACCCGCATG +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLLQAS*LLWTRM
Trigger: CATGCGGGTCCATAACAGCCAAGAAGCCTGCAGGAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCAAAATAAGGCCTCCTaGAAGAACAGCCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTQNKAS*KNSPFF
Trigger: GAAGAAGGGGCTGTTCTTCCAGGAGGCCTTATTTTG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGCTCCTGGCAAGCTTTaGGACAATCCACGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTAPGKL*DNPRLC
Trigger: ACACAGACGTGGATTGTCTCAAAGCTTGCCAGGAGC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGAGGTGAGATGCTGGTaGCTTCCTGAGATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTEVRCW*LPEILP
Trigger: AGGAAGGATCTCAGGAAGTCACCAGCATCTCACCTC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675880.1
CDS-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTCCCACACTTCCAGTTaGGATCATCGACGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSHTSS*DHRRWV
Trigger: TACCCACCGTCGATGATCGCAACTGGAAGTGTGGGA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAGCACCGCCTCAATCTaGTCCTGGCAAGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSTASI*SWQALR
Trigger: TCTCAAAGCTTGCCAGGAGCAGATTGAGGCGGTGCT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGTTCATCCTCCGACTTaGATCCGTCACGTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTVHPPT*IRHVGP
Trigger: AGGACCAACGTGACGGATCCAAGTCGGAGGATGAAC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTCTTTCGGCCCAACTaGCATCCTCACAGGTCGATA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLFRPN*HPHRSI
Trigger: TATCGACCTGTGAGGATGCCAGTTGGGCCGAAAGAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAAGACCAGGATAATTTaGAACCCCTTTAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTKTRII*NPFSGR
Trigger: CCTCCCACTAAAGGGGTTCCAAATTATCCTGGTCTT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGCTTCTTGGCTGTTATaGACCCGCATGGAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTASWLL*TRMEFN
Trigger: ATTAAACTCCATGCGGGTCCATAACAGCCAAGAAGC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGCCCGATGATTTGCTaGGGATGTAAGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGPMIC*GCKSWP
Trigger: TGGCCAACTCTTACATCCCCAGCAAATCATCGGGCC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAGAGCAATGAAGGTCTaGGCATGCTTGCGGATCAGA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTRAMKV*ACLRIR
Trigger: TCTGATCCGCAAGCATGCTCAGACCTTCATTGCTCT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTCAACCCTCATACTATaGAACAAGGCAGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTSTLIL*NKAESV
Trigger: CACAGATTCTGCCTTGTTTCATAGTATGAGGGTTGA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAAGAAACTACATAACTaGGAGAGAGGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTKKLHN*ERGERE
Trigger: CTCTCTCTCTCCTCTCTCTCAGTTATGTAGTTTCTT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCCTTTTCGCATACACTaGTCATGCTACTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTPFRIH*SCYLSA
Trigger: TGCTGATAAGTAGCATGATCAGTGTATGCGAAAAGG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAGGTCTGAGCATGCTTaGGGATCAGAGACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTRSEHA*GSETAS
Trigger: AGAAGCTGTCTCTGATCCGCAAGCATGCTCAGACCT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGCACAAATGGATGGCTaGATGAACAGCTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTAQMDG*MNSSCK
Trigger: TTTACAAGAGCTGTTCATGCAGCCATCCATTTGTGC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGGGGAGAGCTCCTCTaGAACAAAACTCCTACCAAA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGGELL*NKTPTK
Trigger: TTTGGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTACAGAGGGTTTGTTaGCTTAAGGGGACTTTATCA +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLQRVC*LKGTLS
Trigger: TGATAAAGTCCCCTTAAGCCAACAAACCCTCTGTAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGCTCCCCCAAAGAGTaGAGCTGTGTTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGSPKE*SCVCVS
Trigger: AGAAACACAAACACAGCTCCACTCTTTGGGGGAGCC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTCTTGTAAATTGCTCTaGGTCCACACCAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTSCKLL*VHTNRN
Trigger: GTTTCTATTGGTGTGGACTCAGAGCAATTTACAAGA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCACTTTCTAACATCCTaGCCAAACAGACACCCACAC +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTHFLTS*PNRHPH
Trigger: GTGTGGGTGTCTGTTTGGTCAGGATGTTAGAAAGTG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCTTCTTACCCTATTTTaGACAAATGGATGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTLLTLF*TNGWLH
Trigger: ATGCAGCCATCCATTTGTGCAAAATAGGGTAAGAAG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGAAGAGACCAGATTATaGACGCGTCTCTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTEETRL*TRLSLS
Trigger: CGAAAGAGAGAGACGCGTCCATAATCTGGTCTCTTC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAGCTATTCTCAAGGTTaGACTGTCTCAGAGATAAAC +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTSYSQG*TVSEIN
Trigger: GTTTATCTCTGAGACAGTCCAACCTTGAGAATAGCT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGGCAAACTTAAAGTCTaGAGAGGTGAGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTGKLKV*RGEMLV
Trigger: CACCAGCATCTCACCTCTCCAGACTTTAAGTTTGCC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675880.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCATAAATGTTTGTACTaGACGTCTGCCTTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTHKCLY*TSALKG
Trigger: CCCCTTCAAGGCAGACGTTCAGTACAAACATTTATG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAGAATAACATGGACTTaGTATGGCATCACACTTGTT +
Preference number: 4 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTRITWT*YGITLV
Trigger: AACAAGTGTGATGCCATATCAAGTCCATGTTATTCT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTCTTGAGAAAACTCTaGCTAGCTTACTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLLRKL*LAYLLA
Trigger: AGCCAGCAAGTAAGCTAGCCAGAGTTTTCTCAAGAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCAACCTCTTTGCTAACTaGATGCCTCTAAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTNLFAN*MPLRSG
Trigger: TCCACTTCTTAGAGGCATTCAGTTAGCAAAGAGGTT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR TCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTCTTAAAAGGCAGCTaGCTATATCATGTCACCATC +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLLKGS*LYHVTI
Trigger: GATGGTGACATGATATAGTCAGCTGCCTTTTAAGAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCACAGCTCTTGTAAATTaGTCTGAGTCCACACCAATA +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTTALVN*SESTPI
Trigger: TATTGGTGTGGACTCAGAGCAATTTACAAGAGCTGT...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR GCA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTTCTTACCCTATTTTaGACAAATGGATGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLLTLF*TNGWLH
Trigger: ATGCAGCCATCCATTTGTGCAAAATAGGGTAAGAAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS CCA 90 bp GCACGGCCCTGCGGACCGGGTCCACCTCGTGGCACAGCAGCTCCATaGCCAGCCCGGCGGCCCCTCTCCCTCCTGCTTTCCCCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ARPCGPGPPRGTAAP*PARRPLSLLLSPAW
Trigger: CCAGGCCGGGGAAAGCAGGAGGGAGAGGGGCCGCCGGGCTGGCCATGGAGCTGCTGTGCCACGAGGTGGACCCGGTCCGCAGGGCCGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000536537.2
ENST00000675880.1
ENST00000676411.1
CDS GCA 90 bp GCAGGACGCGGTCGTCTCGGAGCAGGTTGCGGTCCCGCACGGCCCTaGGGACCGGGTCCACCTCGTGGCACAGCAGCTCCATGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: AGRGRLGAGCGPARP*GPGPPRGTAAPWPA
Trigger: GGCTGGCCATGGAGCTGCTGTGCCACGAGGTGGACCCGGTCCGCAGGGCCGTGCGGGACCGCAACCTGCTCCGAGACGACCGCGTCCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261254.8
ENST00000536537.2
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS CCA 90 bp GACGGGCAGTGCGATTGCAGGTGTTCACTCGCTTCCGGGACCCTCTaGTCGCAGCCGCGCCCGCCGGGGCGCTGGGCCGCTGCGTTCTGG +
Preference number: 5 (lower is better)
Translates to: DGQCDCRCSLASGTL*SQPRPPGRWAAAFW
Trigger: CCAGAACGCAGCGGCCCAGCGCCCCGGCGGGCGCGGCTGCGACCAGAGGGTCCCGGAAGCGAGTGAACACCTGCAATCGCACTGCCCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTCGTCTCGGAGCAGGTaGCGGTCCCGCACGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSSSRSR*RSRTAL
Trigger: CAGGGCCGTGCGGGACCGCAACCTGCTCCGAGACGA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS TCA 90 bp GACGTGACGCAGCAGCAGGAGTCTCCGTGCCACCCTGAACGAGGCTaGAATGGAGTCGGGCGCTGGCCTCTGGGACTTGCTAACACCTCT +
Preference number: 5 (lower is better)
Translates to: DVTQQQESPCHPERG*NGVGRWPLGLANTS
Trigger: AGAGGTGTTAGCAAGTCCCAGAGGCCAGCGCCCGACTCCATTTCAGCCTCGTTCAGGGTGGCACGGAGACTCCTGCTGCTGCGTCACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS TCA 90 bp GAACATGACAGACGTGACGCAGCAGCAGGAGTCTCCGTGCCACCCTaGACGAGGCTGAAATGGAGTCGGGCGCTGGCCTCTGGGACTTGC +
Preference number: 5 (lower is better)
Translates to: EHDRRDAAAGVSVPP*TRLKWSRALASGTC
Trigger: GCAAGTCCCAGAGGCCAGCGCCCGACTCCATTTCAGCCTCGTTCAGGGTGGCACGGAGACTCCTGCTGCTGCGTCACGTCTGTCATGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS CCA 90 bp CGTGCCACCCTGAACGAGGCTGAAATGGAGTCGGGCGCTGGCCTCTaGGACTTGCTAACACCTCTCAGACGTTCCTGTGGCATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RATLNEAEMESGAGL*DLLTPLRRSCGISW
Trigger: CCAGGAGATGCCACAGGAACGTCTGAGAGGTGTTAGCAAGTCCCAGAGGCCAGCGCCCGACTCCATTTCAGCCTCGTTCAGGGTGGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS TCA 90 bp GGTGAGGGTGTGCCCTCGCCATCGTTAATTGCCCACCTGGAGAGGTaGGATGCTGGTGACTTCCTGAGATCCTTCCTCCGGTGGCACACA +
Preference number: 5 (lower is better)
Translates to: GEGVPSPSLIAHLER*DAGDFLRSFLRWHT
Trigger: TGTGTGCCACCGGAGGAAGGATCTCAGGAAGTCACCAGCATCTCACCTCTCCAGGTGGGCAATTAACGATGGCGAGGGCACACCCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541542.1
CDS CCA 90 bp GGGCGCTGGCCTCTGGGACTTGCTAACACCTCTCAGACGTTCCTGTaGCATCTCCTGGTTACATCCCTTACCCTTACCCTGTCCGACCTG +
Preference number: 5 (lower is better)
Translates to: GRWPLGLANTSQTFL*HLLVTSLTLTLSDL
Trigger: CAGGTCGGACAGGGTAAGGGTAAGGGATGTAACCAGGAGATGCCACAGGAACGTCTGAGAGGTGTTAGCAAGTCCCAGAGGCCAGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGGACGGGCAGTGCGATaGCAGGTGTTCACTCGCTTC +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSGRAVR*QVFTRF
Trigger: GAAGCGAGTGAACACCTGCAATCGCACTGCCCGTCC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTCGTCTCGGAGCAGGTaGCGGTCCCGCACGGCCCTG +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTSSRSR*RSRTAL
Trigger: CAGGGCCGTGCGGGACCGCAACCTGCTCCGAGACGA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTCCCACACTTCCAGTaGCGATCATCGACGGTGGGT +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLPHFQ*RSSTVG
Trigger: ACCCACCGTCGATGATCGCAACTGGAAGTGTGGGAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTTGGATCCGTCACGTaGGTCCTGACGGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLGSVT*VLTVLL
Trigger: CAGCAGTACCGTCAGGACCAACGTGACGGATCCAAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCTCTGGCTAGCTTACTaGCTGGCTGCTCCACTTCCC +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSLWLAY*LAAPLP
Trigger: GGGAAGTGGAGCAGCCAGCAAGTAAGCTAGCCAGAG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS TCA 90 bp GCCCTCGCCATCGTTAATTGCCCACCTGGAGAGGTGAGATGCTGGTaGCTTCCTGAGATCCTTCCTCCGGTGGCACACAGAGCAATGAAG +
Preference number: 5 (lower is better)
Translates to: ALAIVNCPPGEVRCW*LPEILPPVAHRAMK
Trigger: CTTCATTGCTCTGTGTGCCACCGGAGGAAGGATCTCAGGAAGTCACCAGCATCTCACCTCTCCAGGTGGGCAATTAACGATGGCGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541542.1
CDS TCA 90 bp AAATGCCAACAAGCAATATGCTGGTGCAGAAGGCACGCTCAGGGGTaGGGGTGTGCCCTCGCCATCGTTAATTGCCCACCTGGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: KCQQAICWCRRHAQG*GCALAIVNCPPGEV
Trigger: CACCTCTCCAGGTGGGCAATTAACGATGGCGAGGGCACACCCTCACCCCTGAGCGTGCCTTCTGCACCAGCATATTGCTTGTTGGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541542.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGAAGGGAGGCGAGGATaGGGTGGTGGGCGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTEGRRG*GGGRAE
Trigger: CTCTGCTCGCCCACCACCCAATCCTCGCCTCCCTTC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261254.8
ENST00000675880.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCAATCCACGTCTGTGTaGGTGATCTTAGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSQSTSV*VILASS
Trigger: GCTGCTGGCTAAGATCACCAACACAGACGTGGATTG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTGCTCCTGGCAAGCTTaGAGACAATCCACGTCTGTG +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSCSWQA*RQSTSV
Trigger: CACAGACGTGGATTGTCTCAAAGCTTGCCAGGAGCA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAGAGTGGAGCTGTGTTaGTGTTTCTCCGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSRVELC*CFSVEG
Trigger: TCCCTCCACGGAGAAACACAAACACAGCTCCACTCT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTCGTCTCGGAGCAGGTaGCGGTCCCGCACGGCCCTG +
Preference number: 5 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSSRSR*RSRTAL
Trigger: CAGGGCCGTGCGGGACCGCAACCTGCTCCGAGACGA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCGGAGGGAACTGCCCTaGGCTTTCTCCTGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTRRELP*AFSCRL
Trigger: AAGCCTGCAGGAGAAAGCCAAGGGCAGTTCCCTCCG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCCATGCACGTACACATTaGCTGATGGCTTCTCAAAAC +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSHARTH*LMASQN
Trigger: GTTTTGAGAAGCCATCAGCAAATGTGTACGTGCATG...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTCTGCGCATGTAGGGTaGGATGTCCTTCTGCACGCA +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTSAHVG*DVLLHA
Trigger: TGCGTGCAGAAGGACATCCAACCCTACATGCGCAGA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCTCTTCTTACCCTATTTaGCACAAATGGATGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSSSYPI*HKWMAA
Trigger: TGCAGCCATCCATTTGTGCAAAATAGGGTAAGAAGA...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCAATCCACGTCTGTGTaGGTGATCTTAGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTQSTSV*VILASS
Trigger: GCTGCTGGCTAAGATCACCAACACAGACGTGGATTG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTGCTCCTGGCAAGCTTaGAGACAATCCACGTCTGTG +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTCSWQA*RQSTSV
Trigger: CACAGACGTGGATTGTCTCAAAGCTTGCCAGGAGCA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGGGAAGGATCAAAATTaGGCAGGCTGGGGGAACAAC +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTGKDQN*AGWGNN
Trigger: GTTGTTCCCCCAGCCTGCCAAATTTTGATCCTTCCC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGTGATGCTGTCAGGGTaGTCTTCTCCTCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTVMLSG*SSPLAL
Trigger: CAAAGCCAGAGGAGAAGACAACCCTGACAGCATCAC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCAAGCTATTCTCAAGGTaGGACTGTCTCAGAGATAAA +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSKLFSR*DCLRDK
Trigger: TTTATCTCTGAGACAGTCCAACCTTGAGAATAGCTT...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGAGAATAACATGGACTaGATATGGCATCACACTTGT +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSENNMD*IWHHTC
Trigger: ACAAGTGTGATGCCATATCAAGTCCATGTTATTCTC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTCCCACACTTCCAGTaGCGATCATCGACGGTGGGT +
Preference number: 5 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLPHFQ*RSSTVG
Trigger: ACCCACCGTCGATGATCGCAACTGGAAGTGTGGGAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCTTGGATCCGTCACGTaGGTCCTGACGGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: PSLKADTHECSIVVPEMTLGSVT*VLTVLL
Trigger: CAGCAGTACCGTCAGGACCAACGTGACGGATCCAAG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGAGCAAAGCTGGCTCTaGAGAAAACTCTGGCTAGCT +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTEQSWL*RKLWLA
Trigger: AGCTAGCCAGAGTTTTCTCAAGAGCCAGCTTTGCTC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp GGAAGCGCAGCTCCGTCTGAAGAGTTGCCAATCCTGCTAGCAATGGGATGCAGCGCCAATACAACATTTTaGCCATACTTCCTAAAAACC +
Preference number: 5 (lower is better)
Translates to: GSAAPSEELPILLAMGCSANTTF*PYFLKT
Trigger: GGTTTTTAGGAAGTATGGCAAAAATGTTGTATTGGC...GCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCTCGGCGAATTTCGGCTaGGACGGGGCTGGATTACTG +
Preference number: 5 (lower is better)
Translates to: PSLKADTHECSIVVPEMTSANFG*DGAGLL
Trigger: CAGTAATCCAGCCCCGTCCAAGCCGAAATTCGCCGA...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS TCA 90 bp AAAATACCTCTGACACAACATAATCAAATCCGTCGTCTCCTTCCCTaGGCTGAGAAGAGACATCTGGACTTAGCCAAGAAGGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: KIPLTQHNQIRRLLP*AEKRHLDLAKKVVA
Trigger: GGCCACCACCTTCTTGGCTAAGTCCAGATGTCTCTTCTCAGCTCAGGGAAGGAGACGACGGATTTGATTATGTTGTGTCAGAGGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536795.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCTCTTCTCCTCTGGCTTaGTCACTTAAGCCATGTGTG +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTSSPLA*SLKPCV
Trigger: CACACATGGCTTAAGTGACAAAGCCAGAGGAGAAGA...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCCATGCACGTACACATTaGCTGATGGCTTCTCAAAAC +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTHARTH*LMASQN
Trigger: GTTTTGAGAAGCCATCAGCAAATGTGTACGTGCATG...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCCACCATAAACGCTGCTaGCTGCAGGTTCATCTACTC +
Preference number: 5 (lower is better)
Translates to: PSLKADTHECSIVVPEMTHHKRC*LQVHLL
Trigger: GAGTAGATGAACCTGCAGCAAGCAGCGTTTATGGTG...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS TCA 90 bp CTCCCTTGGATGTCGATCTTAGGAAACAAACCAGAAAAATACCTCTaGCACAACATAATCAAATCCGTCGTCTCCTTCCCTGAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: LPWMSILGNKPEKYL*HNIIKSVVSFPELR
Trigger: TCTCAGCTCAGGGAAGGAGACGACGGATTTGATTATGTTGTGTCAGAGGTATTTTTCTGGTTTGTTTCCTAAGATCGACATCCAAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536795.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCAAGCTATTCTCAAGGTaGGACTGTCTCAGAGATAAA +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTKLFSR*DCLRDK
Trigger: TTTATCTCTGAGACAGTCCAACCTTGAGAATAGCTT...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGAGAATAACATGGACTaGATATGGCATCACACTTGT +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTENNMD*IWHHTC
Trigger: ACAAGTGTGATGCCATATCAAGTCCATGTTATTCTC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp AAAGAGCAAGTTCAAATCCAAGGGGGAGAGCTCCTCTGGAACAAAACTCCTACCGCCAATACAACATTTTaGCCATACTTCCTAAAAACC +
Preference number: 5 (lower is better)
Translates to: KEQVQIQGGELLWNKTPTANTTF*PYFLKT
Trigger: GGTTTTTAGGAAGTATGGCAAAAATGTTGTATTGGC...GGTAGGAGTTTTGTTCCAGAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS-3UTR CAA 90 bp CCAAGTTTAAAAGCAGACACACACGAATGTAGTATCGTTGTGCCTGAAATGACCGCCAATACAACATTTTaGCCATACTTCCTAAAAACC +
Preference number: 5 (lower is better)
Translates to: PSLKADTHECSIVVPEMTANTTF*PYFLKT
Trigger: GGTTTTTAGGAAGTATGGCAAAAATGTTGTATTGGC...GGTCATTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261254.8
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS CCA 72 bp TGCGATTGCAGGTGTTCACTCGCTTCCGGGACCCTCTaGTCGCAGCCGCGCCCGCCGGGGCGCTGGGCCGCT +
Preference number: 6 (lower is better)
Translates to: CDCRCSLASGTL*SQPRPPGRWAA
Trigger: AGCGGCCCAGCGCCCCGGCGGGCGCGGCTGCGACCAGAGGGTCCCGGAAGCGAGTGAACACCTGCAATCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS GCA 72 bp GGTCGTCTCGGAGCAGGTTGCGGTCCCGCACGGCCCTaGGGACCGGGTCCACCTCGTGGCACAGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: GRLGAGCGPARP*GPGPPRGTAAP
Trigger: TGGAGCTGCTGTGCCACGAGGTGGACCCGGTCCGCAGGGCCGTGCGGGACCGCAACCTGCTCCGAGACGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261254.8
ENST00000536537.2
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS CAA 72 bp AGCAGGTTCTGCAGGACGCGGTCGTCTCGGAGCAGGTaGCGGTCCCGCACGGCCCTGCGGACCGGGTCCACC +
Preference number: 6 (lower is better)
Translates to: SRFCRTRSSRSR*RSRTALRTGST
Trigger: GGTGGACCCGGTCCGCAGGGCCGTGCGGGACCGCAACCTGCTCCGAGACGACCGCGTCCTGCAGAACCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261254.8
ENST00000536537.2
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS CAA 90 bp TCGATGGTGAGCAGGTTCTGCAGGACGCGGTCGTCTCGGAGCAGGTaGCGGTCCCGCACGGCCCTGCGGACCGGGTCCACCTCGTGGCAC +
Preference number: 6 (lower is better)
Translates to: SMVSRFCRTRSSRSR*RSRTALRTGSTSWH
Trigger: GTGCCACGAGGTGGACCCGGTCCGCAGGGCCGTGCGGGACCGCAACCTGCTCCGAGACGACCGCGTCCTGCAGAACCTGCTCACCATCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261254.8
ENST00000536537.2
ENST00000675880.1
ENST00000676279.1
ENST00000676411.1
CDS GCA 72 bp CGGGGGAGCAGGGTGGGTGGGGACGGGCAGTGCGATTaGAGGTGTTCACTCGCTTCCGGGACCCTCTGGTCG +
Preference number: 6 (lower is better)
Translates to: RGSRVGGDGQCD*RCSLASGTLWS
Trigger: CGACCAGAGGGTCCCGGAAGCGAGTGAACACCTGCAATCGCACTGCCCGTCCCCACCCACCCTGCTCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS CAA 72 bp ACGGGGGAGCAGGGTGGGTGGGGACGGGCAGTGCGATaGCAGGTGTTCACTCGCTTCCGGGACCCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: TGEQGGWGRAVR*QVFTRFRDPLV
Trigger: GACCAGAGGGTCCCGGAAGCGAGTGAACACCTGCAATCGCACTGCCCGTCCCCACCCACCCTGCTCCCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS TCA 72 bp CAGCAGCAGGAGTCTCCGTGCCACCCTGAACGAGGCTaGAATGGAGTCGGGCGCTGGCCTCTGGGACTTGCT +
Preference number: 6 (lower is better)
Translates to: QQQESPCHPERG*NGVGRWPLGLA
Trigger: AGCAAGTCCCAGAGGCCAGCGCCCGACTCCATTTCAGCCTCGTTCAGGGTGGCACGGAGACTCCTGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS TCA 72 bp AGACGTGACGCAGCAGCAGGAGTCTCCGTGCCACCCTaGACGAGGCTGAAATGGAGTCGGGCGCTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: RRDAAAGVSVPP*TRLKWSRALAS
Trigger: AGAGGCCAGCGCCCGACTCCATTTCAGCCTCGTTCAGGGTGGCACGGAGACTCCTGCTGCTGCGTCACGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS CCA 72 bp CGCACTCCCTTCGGCGAATTTCGGCTTGGACGGGGCTaGATTACTGAGGCGGCAGATGCGACAGGCGTGAGT +
Preference number: 6 (lower is better)
Translates to: RTPFGEFRLGRG*ITEAADATGVS
Trigger: ACTCACGCCTGTCGCATCTGCCGCCTCAGTAATCCAGCCCCGTCCAAGCCGAAATTCGCCGAAGGGAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS CAA 72 bp GCCTGTGCATCCGCACTCCCTTCGGCGAATTTCGGCTaGGACGGGGCTGGATTACTGAGGCGGCAGATGCGA +
Preference number: 6 (lower is better)
Translates to: ACASALPSANFG*DGAGLLRRQMR
Trigger: TCGCATCTGCCGCCTCAGTAATCCAGCCCCGTCCAAGCCGAAATTCGCCGAAGGGAGTGCGGATGCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS CCA 72 bp CTGAACGAGGCTGAAATGGAGTCGGGCGCTGGCCTCTaGGACTTGCTAACACCTCTCAGACGTTCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: LNEAEMESGAGL*DLLTPLRRSCG
Trigger: GCCACAGGAACGTCTGAGAGGTGTTAGCAAGTCCCAGAGGCCAGCGCCCGACTCCATTTCAGCCTCGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS CAA 72 bp GAGGCTGAAATGGAGTCGGGCGCTGGCCTCTGGGACTaGCTAACACCTCTCAGACGTTCCTGTGGCATCTCC +
Preference number: 6 (lower is better)
Translates to: EAEMESGAGLWD*LTPLRRSCGIS
Trigger: GGAGATGCCACAGGAACGTCTGAGAGGTGTTAGCAAGTCCCAGAGGCCAGCGCCCGACTCCATTTCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS TCA 72 bp GTGCCCTCGCCATCGTTAATTGCCCACCTGGAGAGGTaGGATGCTGGTGACTTCCTGAGATCCTTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: VPSPSLIAHLER*DAGDFLRSFLR
Trigger: CCGGAGGAAGGATCTCAGGAAGTCACCAGCATCTCACCTCTCCAGGTGGGCAATTAACGATGGCGAGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541542.1
CDS TCA 72 bp CAAGCAATATGCTGGTGCAGAAGGCACGCTCAGGGGTaGGGGTGTGCCCTCGCCATCGTTAATTGCCCACCT +
Preference number: 6 (lower is better)
Translates to: QAICWCRRHAQG*GCALAIVNCPP
Trigger: AGGTGGGCAATTAACGATGGCGAGGGCACACCCTCACCCCTGAGCGTGCCTTCTGCACCAGCATATTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541542.1
CDS TCA 72 bp CTTCGGCGAATTTCGGCTTGGACGGGGCTGGATTACTaGGGCGGCAGATGCGACAGGCGTGAGTTAAGAAGG +
Preference number: 6 (lower is better)
Translates to: LRRISAWTGLDY*GGRCDRRELRR
Trigger: CCTTCTTAACTCACGCCTGTCGCATCTGCCGCCTCAGTAATCCAGCCCCGTCCAAGCCGAAATTCGCCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS CAA 90 bp ACCCTGAACGAGGCTGAAATGGAGTCGGGCGCTGGCCTCTGGGACTaGCTAACACCTCTCAGACGTTCCTGTGGCATCTCCTGGTTACAT +
Preference number: 6 (lower is better)
Translates to: TLNEAEMESGAGLWD*LTPLRRSCGISWLH
Trigger: ATGTAACCAGGAGATGCCACAGGAACGTCTGAGAGGTGTTAGCAAGTCCCAGAGGCCAGCGCCCGACTCCATTTCAGCCTCGTTCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS TCA 72 bp TTGCCCACCTGGAGAGGTGAGATGCTGGTGACTTCCTaGGATCCTTCCTCCGGTGGCACACAGAGCAATGAA +
Preference number: 6 (lower is better)
Translates to: LPTWRGEMLVTS*DPSSGGTQSNE
Trigger: TTCATTGCTCTGTGTGCCACCGGAGGAAGGATCTCAGGAAGTCACCAGCATCTCACCTCTCCAGGTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541542.1
CDS TCA 72 bp ATCGTTAATTGCCCACCTGGAGAGGTGAGATGCTGGTaGCTTCCTGAGATCCTTCCTCCGGTGGCACACAGA +
Preference number: 6 (lower is better)
Translates to: IVNCPPGEVRCW*LPEILPPVAHR
Trigger: TCTGTGTGCCACCGGAGGAAGGATCTCAGGAAGTCACCAGCATCTCACCTCTCCAGGTGGGCAATTAACGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541542.1
CDS CCA 72 bp CCTCTGGGACTTGCTAACACCTCTCAGACGTTCCTGTaGCATCTCCTGGTTACATCCCTTACCCTTACCCTG +
Preference number: 6 (lower is better)
Translates to: PLGLANTSQTFL*HLLVTSLTLTL
Trigger: CAGGGTAAGGGTAAGGGATGTAACCAGGAGATGCCACAGGAACGTCTGAGAGGTGTTAGCAAGTCCCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS CCA 72 bp TTGCTAACACCTCTCAGACGTTCCTGTGGCATCTCCTaGTTACATCCCTTACCCTTACCCTGTCCGACCTGT +
Preference number: 6 (lower is better)
Translates to: LLTPLRRSCGIS*LHPLPLPCPTC
Trigger: ACAGGTCGGACAGGGTAAGGGTAAGGGATGTAACCAGGAGATGCCACAGGAACGTCTGAGAGGTGTTAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536537.2
CDS GCA 72 bp GGACACATAGGAGGCACATCAAGAGGAAGGAGGGAGTaGAGGCAAAGTAGAAAAATGCGGACAAGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: GHIGGTSRGRRE*RQSRKMRTRRR
Trigger: TCTTCTCCTTGTCCGCATTTTTCTACTTTGCCTGCACTCCCTCCTTCCTCTTGATGTGCCTCCTATGTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676411.1
CDS TCA 72 bp CTGACACAACATAATCAAATCCGTCGTCTCCTTCCCTaGGCTGAGAAGAGACATCTGGACTTAGCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: LTQHNQIRRLLP*AEKRHLDLAKK
Trigger: CTTCTTGGCTAAGTCCAGATGTCTCTTCTCAGCTCAGGGAAGGAGACGACGGATTTGATTATGTTGTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536795.1
CDS CCA 72 bp AAGAGGGGGTGTCACCTGCTGAACTTTGCACTCCCTTaGATGTCGATCTTAGGAAACAAACCAGAAAAATAC +
Preference number: 6 (lower is better)
Translates to: KRGCHLLNFALP*MSILGNKPEKY
Trigger: GTATTTTTCTGGTTTGTTTCCTAAGATCGACATCCAAGGGAGTGCAAAGTTCAGCAGGTGACACCCCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536795.1
CDS GCA 72 bp ATTTCTCAGCAGTCTGTTAAGTCTCTTGATCAAAAATaGCAACAAGCAATATGCTGGTGCAGAAGGCACGCT +
Preference number: 6 (lower is better)
Translates to: ISQQSVKSLDQK*QQAICWCRRHA
Trigger: AGCGTGCCTTCTGCACCAGCATATTGCTTGTTGGCATTTTTGATCAAGAGACTTAACAGACTGCTGAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541542.1
CDS CAA 72 bp ACCAGGTACAAATTTCTCAGCAGTCTGTTAAGTCTCTaGATCAAAAATGCCAACAAGCAATATGCTGGTGCA +
Preference number: 6 (lower is better)
Translates to: TRYKFLSSLLSL*IKNANKQYAGA
Trigger: TGCACCAGCATATTGCTTGTTGGCATTTTTGATCAAGAGACTTAACAGACTGCTGAGAAATTTGTACCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541542.1