Pregenerated sensors for CCNB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000157456Ensembl transcript IDs: ENST00000288207.7, ENST00000559622.5, ENST00000561077.1, ENST00000621385.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGACAGCACTAAGTCTCCTTTGGCTCCTCCTCATAGGTGGGCCATaGAGAGATAGACACCATGCCCTCAGGATGCCCCCTGAATGGGCC | + |
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Preference number: 1 (lower is better) Translates to: RTALSLLWLLLIGGP*RDRHHALRMPPEWA Trigger: GGCCCATTCAGGGGGCATCCTGAGGGCATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAGCCAAAGGAGACTTAGTGCTGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR GCA 90 bp | GCTACCAGAGGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTaGCATCAGGACATAACAGGTTCACCAGGCCTGGCAGCAATAGGA | + |
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Preference number: 1 (lower is better) Translates to: ATRGMGGGAVFTTPK*HQDITGSPGLAAIG Trigger: TCCTATTGCTGCCAGGCCTGGTGAACCTGTTATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCCTCTGGTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR TCA 90 bp | CACAAGCACAGGACAGCACTAAGTCTCCTTTGGCTCCTCCTCATAGGTGGGCCACCTCAGGATGCCCCCTaGATGGGCCTCTTCCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: HKHRTALSLLWLLLIGGPPQDAP*MGLFPL Trigger: AAGAGGGAAGAGGCCCATTCAGGGGGCATCCTGAGG...TGGCCCACCTATGAGGAGGAGCCAAAGGAGACTTAGTGCTGTCCTGTGCTTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR GCA 90 bp | GGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATAACAGGTTCACCACCAGCCTTCCCTGCTTaGAAAGTGCCCTCCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GGAVFTTPKCHQDITGSPPAFPA*KVPSPG Trigger: TCCTGGGGAGGGCACTTTGCAAGCAGGGAAGGCTGG...TGGTGAACCTGTTATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCTCATAGGTGGGCCATGCAGAGATAGACACCATGCCCTCAGGATGCCCTGCCTCAAAAGACCCTaGACAAAGGCTCTGAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: LLLIGGPCRDRHHALRMPCLKRP*TKALSN Trigger: GTTACTCAGAGCCTTTGTCCAGGGTCTTTTGAGGCA...GGGCATCCTGAGGGCATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATACCACCACACACTTGGTaGGCTCTGATGTTTGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: RGMGGGAVFTTPKCHQDIPPHTW*ALMFGV Trigger: GACACCAAACATCAGAGCTCACCAAGTGTGTGGTGG...TATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR TCA 90 bp | CTGATGTTTGGTGTCACACAAGCACAGGACAGCACTAAGTCTCCTTTGGCTCCTAGAAAAAGGGCACAATaGAGCACACATCCCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LMFGVTQAQDSTKSPLAPRKRAQ*STHPQG Trigger: CCCCTGGGGATGTGTGCTTCATTGTGCCCTTTTTCT...AGGAGCCAAAGGAGACTTAGTGCTGTCCTGTGCTTGTGTGACACCAAACATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR TCA 90 bp | GGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATAACAGGTTCACCACCTGGACAAAGGCTCTaGGTAACATCACCTGAATAC | + |
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Preference number: 2 (lower is better) Translates to: GGAVFTTPKCHQDITGSPPGQRL*VTSPEY Trigger: GTATTCAGGTGATGTTACTCAGAGCCTTTGTCCAGG...TGGTGAACCTGTTATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATATGTTGTGAGGACACTTaGGACTCTTCTGAGGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: RGMGGGAVFTTPKCHQDICCEDT*DSSEVQ Trigger: TTGAACCTCAGAAGAGTCTCAAGTGTCCTCACAACA...TATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR GCA 90 bp | TTTCAAGGTCCAAGTAGCAGGCTTCCTCTTGTAGGCTACCAGAGGGATGGGAGGCAGGGTTTATCAGTATaGTCCATACCATACTGTACC | + |
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Preference number: 2 (lower is better) Translates to: FQGPSSRLPLVGYQRDGRQGLSV*SIPYCT Trigger: GGTACAGTATGGTATGGAGCATACTGATAAACCCTG...CCTCCCATCCCTCTGGTAGCCTACAAGAGGAAGCCTGCTACTTGGACCTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR GCA 90 bp | AATTATCAAAGGTCCACGGCTACAATCATGATCACATTGATGATGCCCAATCGCACCATGCCCTCAGGATaGCCCCTGAATGGGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: NYQRSTATIMITLMMPNRTMPSG*PLNGPL Trigger: AAGAGGCCCATTCAGGGGGCATCCTGAGGGCATGGT...GCGATTGGGCATCATCAATGTGATCATGATTGTAGCCGTGGACCTTTGATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR TCA 90 bp | AAGTGGGCCCTCTCTCTTCCCAATCACATGCAGACCAGCCTTCCCTGCTTGCAAAGTAATTCAATACATTaGGTAACCGACTGGTTGACT | + |
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Preference number: 2 (lower is better) Translates to: KWALSLPNHMQTSLPCLQSNSIH*VTDWLT Trigger: AGTCAACCAGTCGGTTACTCAATGTATTGAATTACT...TTGCAAGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAGAGAGGGCCCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR GCA 90 bp | TACAATCATGATCACATTGATGATGCCCAATCGCTGAAGCCAGTGAAAGCTCTGCTCTTCCCAATCACATaGAGACCAGCCTTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: YNHDHIDDAQSLKPVKALLFPIT*RPAFPA Trigger: AGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAG...CAGAGCTTTCACTGGCTTCAGCGATTGGGCATCATCAATGTGATCATGATTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR CCA 90 bp | CACTTCCATGAAGCAAATCATGTTGTGAGGACACTTGAGACTCTTCTGAGGTTCCACCGCCATTTGAAGTaGGCCCTCTCTCTTCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: HFHEANHVVRTLETLLRFHRHLK*ALSLPN Trigger: ATTGGGAAGAGAGAGGGCCCACTTCAAATGGCGGTG...GAACCTCAGAAGAGTCTCAAGTGTCCTCACAACATGATTTGCTTCATGGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR TCA 90 bp | TTTCAAGGTCCAAGTAGCAGGCTTCCTCTTGTAGGCTACCAGAGGGATGGGAGGCATATTACACTTCCATaGAGCAAATCATGTTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: FQGPSSRLPLVGYQRDGRHITLP*SKSCCE Trigger: CTCACAACATGATTTGCTTCATGGAAGTGTAATATG...CCTCCCATCCCTCTGGTAGCCTACAAGAGGAAGCCTGCTACTTGGACCTTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR CCA 90 bp | ATACTTATTCTTGATGGCCTGCAGAAGTCATTTGTGATTAAGCACATGTCAGGAAACCGACTGGTTGACTaGGATCTGGGCCTGGACATG | + |
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Preference number: 2 (lower is better) Translates to: ILILDGLQKSFVIKHMSGNRLVD*DLGLDM Trigger: CATGTCCAGGCCCAGATCCCAGTCAACCAGTCGGTT...TCCTGACATGTGCTTAATCACAAATGACTTCTGCAGGCCATCAAGAATAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR TCA 90 bp | CACTTCCATGAAGCAAATCATGTTGTGAGGACACTTGAGACTCTTCTGAGGTTCCTGAGTAACATCACCTaGATACGCAATATAATACAC | + |
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Preference number: 2 (lower is better) Translates to: HFHEANHVVRTLETLLRFLSNIT*IRNIIH Trigger: GTGTATTATATTGCGTATTCAGGTGATGTTACTCAG...GAACCTCAGAAGAGTCTCAAGTGTCCTCACAACATGATTTGCTTCATGGAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR GCA 72 bp | CTAAGTCTCCTTTGGCTCCTCCTCATAGGTGGGCCATaGAGAGATAGACACCATGCCCTCAGGATGCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: LSLLWLLLIGGP*RDRHHALRMPP Trigger: AGGGGGCATCCTGAGGGCATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAGCCAAAGGAGACTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR GCA 72 bp | GGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTaGCATCAGGACATAACAGGTTCACCAGGCCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: GMGGGAVFTTPK*HQDITGSPGLA Trigger: TGCCAGGCCTGGTGAACCTGTTATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCCTCATAGGTGGGCCATGCAGAGATAGACACCATGCCCTCAGGATGCCCGGCGTTTTTCCATCATaGCCTCAAAAGACCCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: LLLIGGPCRDRHHALRMPGVFPS*PQKTLD Trigger: GTCCAGGGTCTTTTGAGGCAATGATGGAAAAACGCC...GGGCATCCTGAGGGCATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR CCA 72 bp | GTGTCACACAAGCACAGGACAGCACTAAGTCTCCTTTaGCTCCTCCTCATAGGTGGGCCATGCAGAGATAGA | + |
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Preference number: 3 (lower is better) Translates to: VSHKHRTALSLL*LLLIGGPCRDR Trigger: TCTATCTCTGCATGGCCCACCTATGAGGAGGAGCCAAAGGAGACTTAGTGCTGTCCTGTGCTTGTGTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR CAA 90 bp | ATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATAACAGGTATAATACACCGCCATTaGAAGTGGGCCCTCTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: MGGGAVFTTPKCHQDITGIIHRH*KWALSL Trigger: AAGAGAGAGGGCCCACTTCAAATGGCGGTGTATTAT...ACCTGTTATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR CAA 90 bp | TACAATCATGATCACATTGATGATGCCCAATCGCTGAAGCCAGTGAAAGCTCTGAGCACTAAGTCTCCTTaGGCTCCTCCTCATAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: YNHDHIDDAQSLKPVKALSTKSP*APPHRW Trigger: CCACCTATGAGGAGGAGCCAAAGGAGACTTAGTGCT...CAGAGCTTTCACTGGCTTCAGCGATTGGGCATCATCAATGTGATCATGATTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| 3UTR-3UTR CAA 90 bp | CACTTCCATGAAGCAAATCATGTTGTGAGGACACTTGAGACTCTTCTGAGGTTCGCTAGCCTATCGACCTaGTTTCAAATAAAGCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: HFHEANHVVRTLETLLRFASLST*FQIKLA Trigger: AGCAAGCTTTATTTGAAACAAGGTCGATAGGCTAGC...GAACCTCAGAAGAGTCTCAAGTGTCCTCACAACATGATTTGCTTCATGGAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | CTCCTCCTCATAGGTGGGCCATGCAGAGATAGACACCATGCCCTCAGGATGCCCACCATGCCCTCAGGATaGCCCCTGAATGGGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLLIGGPCRDRHHALRMPTMPSG*PLNGPL Trigger: AAGAGGCCCATTCAGGGGGCATCCTGAGGGCATGGT...GGGCATCCTGAGGGCATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | AGAGGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATACCAGCCTTCCCTGCTTaGAAAGTGCCCTCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RGMGGGAVFTTPKCHQDIPAFPA*KVPSPG Trigger: TCCTGGGGAGGGCACTTTGCAAGCAGGGAAGGCTGG...TATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CCA 90 bp | CTCCTCCTCATAGGTGGGCCATGCAGAGATAGACACCATGCCCTCAGGATGCCCTATTCTCCAAATCACTaGACACCGTCGGGCGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLIGGPCRDRHHALRMPYSPNH*TPSGVG Trigger: TCCGACGCCCGACGGTGTCCAGTGATTTGGAGAATA...GGGCATCCTGAGGGCATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | CCCTCTCTCTTCCCAATCACATGCAGACCAGCCTTCCCTGCTTGCAAAGTGCCCCTCTTCCCAATCACATaGAGACCAGCCTTCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PSLFPITCRPAFPACKVPLFPIT*RPAFPA Trigger: AGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAG...GGGCACTTTGCAAGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAGAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | CACATGCAGACCAGCCTTCCCTGCTTGCAAAGTGCCCTCCCCAGGATGCTAGTACTCATAGGTGGGCCATaGAGAGATAGACACCATGCC | + |
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Preference number: 4 (lower is better) Translates to: HMQTSLPCLQSALPRMLVLIGGP*RDRHHA Trigger: GGCATGGTGTCTATCTCTGCATGGCCCACCTATGAG...TACTAGCATCCTGGGGAGGGCACTTTGCAAGCAGGGAAGGCTGGTCTGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CCA 90 bp | CCCTCTCTCTTCCCAATCACATGCAGACCAGCCTTCCCTGCTTGCAAAGTGCCCATCTGGGCCTGGACATaGCTAGCCTATCGACCTTGT | + |
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Preference number: 4 (lower is better) Translates to: PSLFPITCRPAFPACKVPIWAWT*LAYRPC Trigger: ACAAGGTCGATAGGCTAGCCATGTCCAGGCCCAGAT...GGGCACTTTGCAAGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAGAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | CTCCTCCTCATAGGTGGGCCATGCAGAGATAGACACCATGCCCTCAGGATGCCCACACTTGGTGAGCTCTaGTGTTTGGTGTCACACAAG | + |
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Preference number: 4 (lower is better) Translates to: LLLIGGPCRDRHHALRMPTLGEL*CLVSHK Trigger: CTTGTGTGACACCAAACATCAGAGCTCACCAAGTGT...GGGCATCCTGAGGGCATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CCA 90 bp | TTTCAAGGTCCAAGTAGCAGGCTTCCTCTTGTAGGCTACCAGAGGGATGGGAGGAACCGACTGGTTGACTaGGATCTGGGCCTGGACATG | + |
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Preference number: 4 (lower is better) Translates to: FQGPSSRLPLVGYQRDGRNRLVD*DLGLDM Trigger: CATGTCCAGGCCCAGATCCCAGTCAACCAGTCGGTT...CCTCCCATCCCTCTGGTAGCCTACAAGAGGAAGCCTGCTACTTGGACCTTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CCA 90 bp | TTTCAAGGTCCAAGTAGCAGGCTTCCTCTTGTAGGCTACCAGAGGGATGGGAGGGCACTAAGTCTCCTTTaGCTCCTCCTCATAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: FQGPSSRLPLVGYQRDGRALSLL*LLLIGG Trigger: CCCACCTATGAGGAGGAGCCAAAGGAGACTTAGTGC...CCTCCCATCCCTCTGGTAGCCTACAAGAGGAAGCCTGCTACTTGGACCTTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | CTCCTCCTCATAGGTGGGCCATGCAGAGATAGACACCATGCCCTCAGGATGCCCTTTACGACACCTAAGTaGCATCAGGACATAACAGGT | + |
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Preference number: 4 (lower is better) Translates to: LLLIGGPCRDRHHALRMPFTTPK*HQDITG Trigger: ACCTGTTATGTCCTGATGGCACTTAGGTGTCGTAAA...GGGCATCCTGAGGGCATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CCA 90 bp | ATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATAACAGGTCACCGCCATTTGAAGTaGGCCCTCTCTCTTCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: MGGGAVFTTPKCHQDITGHRHLK*ALSLPN Trigger: ATTGGGAAGAGAGAGGGCCCACTTCAAATGGCGGTG...ACCTGTTATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CCA 90 bp | AAGTGGGCCCTCTCTCTTCCCAATCACATGCAGACCAGCCTTCCCTGCTTGCAATGCCTCAAAAGACCCTaGACAAAGGCTCTGAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: KWALSLPNHMQTSLPCLQCLKRP*TKALSN Trigger: GTTACTCAGAGCCTTTGTCCAGGGTCTTTTGAGGCA...TTGCAAGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAGAGAGGGCCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | CCCTCTCTCTTCCCAATCACATGCAGACCAGCCTTCCCTGCTTGCAAAGTGCCCGTAATCCCAACTAATTaGAGCTTCTTCCGGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: PSLFPITCRPAFPACKVPVIPTN*SFFRET Trigger: AGTTTCCCGGAAGAAGCTTCAATTAGTTGGGATTAC...GGGCACTTTGCAAGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAGAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | AAGTGGGCCCTCTCTCTTCCCAATCACATGCAGACCAGCCTTCCCTGCTTGCAATGTTGTGAGGACACTTaGGACTCTTCTGAGGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: KWALSLPNHMQTSLPCLQCCEDT*DSSEVQ Trigger: TTGAACCTCAGAAGAGTCTCAAGTGTCCTCACAACA...TTGCAAGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAGAGAGGGCCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | CTAAGTCTCCTTTGGCTCCTCCTCATAGGTGGGCCATGCAGAGATAGACACCATTGTGGGTTTATGGACTaGAAAACCTCCAGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSLLWLLLIGGPCRDRHHCGFMD*KTSSCL Trigger: CAGGCAGCTGGAGGTTTTGCAGTCCATAAACCCACA...ATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAGCCAAAGGAGACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | CACAAGCACAGGACAGCACTAAGTCTCCTTTGGCTCCTCCTCATAGGTGGGCCACTAGGATGGCACGCATaGGTCCATTTATATCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HKHRTALSLLWLLLIGGPLGWHA*VHLYLF Trigger: GAAGAGATATAAATGGACGCATGCGTGCCATCCTAG...TGGCCCACCTATGAGGAGGAGCCAAAGGAGACTTAGTGCTGTCCTGTGCTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | CGACTGGTTGACTGGGATCTGGGCCTGGACATGGCTAGCCTATCGACCTTGTTTGAGGTTCAAATACCTTaGTCTTTGCCACCACACACT | + |
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Preference number: 4 (lower is better) Translates to: RLVDWDLGLDMASLSTLFEVQIP*SLPPHT Trigger: AGTGTGTGGTGGCAAAGAGCAAGGTATTTGAACCTC...AAACAAGGTCGATAGGCTAGCCATGTCCAGGCCCAGATCCCAGTCAACCAGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CCA 90 bp | AGAGGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATAGTGAGCTCTGATGTTTaGTGTCACACAAGCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: RGMGGGAVFTTPKCHQDIVSSDV*CHTSTG Trigger: TCCTGTGCTTGTGTGACACCAAACATCAGAGCTCAC...TATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | CTAAGTCTCCTTTGGCTCCTCCTCATAGGTGGGCCATGCAGAGATAGACACCATTTCCGGGAAACTGGCTaGACCTGTAAAAATCGATCC | + |
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Preference number: 4 (lower is better) Translates to: LSLLWLLLIGGPCRDRHHFRETG*TCKNRS Trigger: GGATCGATTTTTACAGGTTCAGCCAGTTTCCCGGAA...ATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAGCCAAAGGAGACTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | AGAGGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATACAGTCCTCTCAGGACTaGACACATATTACACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RGMGGGAVFTTPKCHQDIQSSQD*THITLP Trigger: TGGAAGTGTAATATGTGTTCAGTCCTGAGAGGACTG...TATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | AAGTGGGCCCTCTCTCTTCCCAATCACATGCAGACCAGCCTTCCCTGCTTGCAACAGGGTTTATCAGTATaGTCCATACCATACTGTACC | + |
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Preference number: 4 (lower is better) Translates to: KWALSLPNHMQTSLPCLQQGLSV*SIPYCT Trigger: GGTACAGTATGGTATGGAGCATACTGATAAACCCTG...TTGCAAGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAGAGAGGGCCCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | TTTCAAGGTCCAAGTAGCAGGCTTCCTCTTGTAGGCTACCAGAGGGATGGGAGGGCGTTTTTCCATCATTaGCTCAAAAGACCCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: FQGPSSRLPLVGYQRDGRAFFHH*LKRPWT Trigger: TGTCCAGGGTCTTTTGAGGCAATGATGGAAAAACGC...CCTCCCATCCCTCTGGTAGCCTACAAGAGGAAGCCTGCTACTTGGACCTTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | TTTCAAGGTCCAAGTAGCAGGCTTCCTCTTGTAGGCTACCAGAGGGATGGGAGGAAGCAAATCATGTTGTaGGGACACTTGAGACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FQGPSSRLPLVGYQRDGRKQIML*GHLRLF Trigger: GAAGAGTCTCAAGTGTCCTCACAACATGATTTGCTT...CCTCCCATCCCTCTGGTAGCCTACAAGAGGAAGCCTGCTACTTGGACCTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | AGAGGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATACAATGTCCTCGATTTTaGAGAGCAAGGCATCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: RGMGGGAVFTTPKCHQDIQCPRF*RARHQK Trigger: TTTCTGATGCCTTGCTCTGCAAAATCGAGGACATTG...TATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CCA 90 bp | TATAATACACCGCCATTTGAAGTGGGCCCTCTCTCTTCCCAATCACATGCAGACGCCAATCCACTAGGATaGCACGCATGCGTCCATTTA | + |
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Preference number: 4 (lower is better) Translates to: YNTPPFEVGPLSSQSHADANPLG*HACVHL Trigger: TAAATGGACGCATGCGTGCCATCCTAGTGGATTGGC...GTCTGCATGTGATTGGGAAGAGAGAGGGCCCACTTCAAATGGCGGTGTATTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | TACAATCATGATCACATTGATGATGCCCAATCGCTGAAGCCAGTGAAAGCTCTGAGAAAAAGGGCACAATaGAGCACACATCCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: YNHDHIDDAQSLKPVKALRKRAQ*STHPQG Trigger: CCCCTGGGGATGTGTGCTTCATTGTGCCCTTTTTCT...CAGAGCTTTCACTGGCTTCAGCGATTGGGCATCATCAATGTGATCATGATTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | ATACTTATTCTTGATGGCCTGCAGAAGTCATTTGTGATTAAGCACATGTCAGGACCTCAGGATGCCCCCTaGATGGGCCTCTTCCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ILILDGLQKSFVIKHMSGPQDAP*MGLFPL Trigger: AAGAGGGAAGAGGCCCATTCAGGGGGCATCCTGAGG...TCCTGACATGTGCTTAATCACAAATGACTTCTGCAGGCCATCAAGAATAAGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | ATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATAACAGGTGGTGATAGGAACAAATaGTTTCAAGGTCCAAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: MGGGAVFTTPKCHQDITGGDRNK*FQGPSS Trigger: GCTACTTGGACCTTGAAATCATTTGTTCCTATCACC...ACCTGTTATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | CTGATGTTTGGTGTCACACAAGCACAGGACAGCACTAAGTCTCCTTTGGCTCCTGTCAGGAACCCCCAATaGTACCTTATTCCTAGTCTA | + |
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Preference number: 4 (lower is better) Translates to: LMFGVTQAQDSTKSPLAPVRNPQ*YLIPSL Trigger: TAGACTAGGAATAAGGTATCATTGGGGGTTCCTGAC...AGGAGCCAAAGGAGACTTAGTGCTGTCCTGTGCTTGTGTGACACCAAACATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | AGAGGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATATGCAGAAGTCATTTGTaGTTAAGCACATGTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: RGMGGGAVFTTPKCHQDICRSHL*LSTCQE Trigger: TTCCTGACATGTGCTTAATCACAAATGACTTCTGCA...TATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | AGAGGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATAAGTAATTCAATACATTaGGTAACCGACTGGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: RGMGGGAVFTTPKCHQDISNSIH*VTDWLT Trigger: AGTCAACCAGTCGGTTACTCAATGTATTGAATTACT...TATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR GCA 90 bp | TATAATACACCGCCATTTGAAGTGGGCCCTCTCTCTTCCCAATCACATGCAGACTGGGCTCATAACATGTaGCTGACCATTTCCTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: YNTPPFEVGPLSSQSHADWAHNM*LTISFH Trigger: ATGGAAGGAAATGGTCAGGCACATGTTATGAGCCCA...GTCTGCATGTGATTGGGAAGAGAGAGGGCCCACTTCAAATGGCGGTGTATTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | GGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATAACAGGTTCACCACTGAGTAACATCACCTaGATACGCAATATAATACAC | + |
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Preference number: 4 (lower is better) Translates to: GGAVFTTPKCHQDITGSPLSNIT*IRNIIH Trigger: GTGTATTATATTGCGTATTCAGGTGATGTTACTCAG...TGGTGAACCTGTTATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CCA 90 bp | AATAAAACACAGCTGGTAGCACAGGTGATAGGAACAAATGATTTCAAGGTCCAAAGGCTACCAGAGGGATaGGAGGGGGAGCTGTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: NKTQLVAQVIGTNDFKVQRLPEG*EGELCL Trigger: TAAACACAGCTCCCCCTCCCATCCCTCTGGTAGCCT...TTGGACCTTGAAATCATTTGTTCCTATCACCTGTGCTACCAGCTGTGTTTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | CCATCCCCATTAATGAATAAAACACAGCTGGTAGCACAGGTGATAGGAACAAATCTCATAACATGTGCCTaGCCATTTCCTTCCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: PSPLMNKTQLVAQVIGTNLITCA*PFPSIP Trigger: GGGGATGGAAGGAAATGGTCAGGCACATGTTATGAG...ATTTGTTCCTATCACCTGTGCTACCAGCTGTGTTTTATTCATTAATGGGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | TATAATACACCGCCATTTGAAGTGGGCCCTCTCTCTTCCCAATCACATGCAGACCATATTACACTTCCATaGAGCAAATCATGTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: YNTPPFEVGPLSSQSHADHITLP*SKSCCE Trigger: CTCACAACATGATTTGCTTCATGGAAGTGTAATATG...GTCTGCATGTGATTGGGAAGAGAGAGGGCCCACTTCAAATGGCGGTGTATTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | AATAAAACACAGCTGGTAGCACAGGTGATAGGAACAAATGATTTCAAGGTCCAACCTGGACAAAGGCTCTaGGTAACATCACCTGAATAC | + |
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Preference number: 4 (lower is better) Translates to: NKTQLVAQVIGTNDFKVQPGQRL*VTSPEY Trigger: GTATTCAGGTGATGTTACTCAGAGCCTTTGTCCAGG...TTGGACCTTGAAATCATTTGTTCCTATCACCTGTGCTACCAGCTGTGTTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | CCATCCCCATTAATGAATAAAACACAGCTGGTAGCACAGGTGATAGGAACAAATCACTTGAGACTCTTCTaGGGTTCAAATACCTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSPLMNKTQLVAQVIGTNHLRLF*GSNTLL Trigger: GAGCAAGGTATTTGAACCTCAGAAGAGTCTCAAGTG...ATTTGTTCCTATCACCTGTGCTACCAGCTGTGTTTTATTCATTAATGGGGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR TCA 90 bp | CCATCCCCATTAATGAATAAAACACAGCTGGTAGCACAGGTGATAGGAACAAATTTGCATACTTATTCTTaGTGGCCTGCAGAAGTCATT | + |
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Preference number: 4 (lower is better) Translates to: PSPLMNKTQLVAQVIGTNLHTYS*WPAEVI Trigger: AATGACTTCTGCAGGCCATCAAGAATAAGTATGCAA...ATTTGTTCCTATCACCTGTGCTACCAGCTGTGTTTTATTCATTAATGGGGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CCA 90 bp | ATACTTATTCTTGATGGCCTGCAGAAGTCATTTGTGATTAAGCACATGTCAGGAGACAATAAAAGAGGGTaGCAACTAGTGCTTAACAAA | + |
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Preference number: 4 (lower is better) Translates to: ILILDGLQKSFVIKHMSGDNKRG*QLVLNK Trigger: TTTGTTAAGCACTAGTTGCCACCCTCTTTTATTGTC...TCCTGACATGTGCTTAATCACAAATGACTTCTGCAGGCCATCAAGAATAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS TCA 90 bp | CCTCAGGTGTGGGAGAAGGACCCGTCGGGCGTCGGAGCAGCGCCATaGGGGACGGGGAAGGCAAGAGTGCCAGCCCGGCCCAGGGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: PQVWEKDPSGVGAAP*GTGKARVPARPREG Trigger: TCCCTCCCTGGGCCGGGCTGGCACTCTTGCCTTCCCCGTCCCTCATGGCGCTGCTCCGACGCCCGACGGGTCCTTCTCCCACACCTGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559622.5 |
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| CDS TCA 90 bp | CGGGGAAGGCAAGAGTGCCAGCCCGGCCCAGGGAGGGACGCGGACTaGAAAGGGAGGACACTAGCGTACGAGGCGCCGTTAGGACTGCTC | + |
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Preference number: 5 (lower is better) Translates to: RGRQECQPGPGRDAD*KGRTLAYEAPLGLL Trigger: GAGCAGTCCTAACGGCGCCTCGTACGCTAGTGTCCTCCCTTTTCAGTCCGCGTCCCTCCCTGGGCCGGGCTGGCACTCTTGCCTTCCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288207.7 ENST00000559622.5 ENST00000561077.1 |
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| CDS TCA 90 bp | TATTCTCCAAATCACTGGACACCGTCGGGCGTCGGAGCAGCGCCATaGGGGACGGGGAAGGCAAGAGTGCCAGCCCGGCCCAGGGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: YSPNHWTPSGVGAAP*GTGKARVPARPREG Trigger: TCCCTCCCTGGGCCGGGCTGGCACTCTTGCCTTCCCCGTCCCTCATGGCGCTGCTCCGACGCCCGACGGTGTCCAGTGATTTGGAGAATA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000288207.7 ENST00000561077.1 |
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| CDS-3UTR CAA 90 bp | ATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATAACAGGTACCAGCCTTCCCTGCTaGCAAAGTGCCCTCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: MGGGAVFTTPKCHQDITGTSLPC*QSALPR Trigger: CCTGGGGAGGGCACTTTGCAAGCAGGGAAGGCTGGT...ACCTGTTATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CAA 90 bp | CACAAGCACAGGACAGCACTAAGTCTCCTTTGGCTCCTCCTCATAGGTGGGCCAAGCACTAAGTCTCCTTaGGCTCCTCCTCATAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: HKHRTALSLLWLLLIGGPSTKSP*APPHRW Trigger: CCACCTATGAGGAGGAGCCAAAGGAGACTTAGTGCT...TGGCCCACCTATGAGGAGGAGCCAAAGGAGACTTAGTGCTGTCCTGTGCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CAA 90 bp | AAGTGGGCCCTCTCTCTTCCCAATCACATGCAGACCAGCCTTCCCTGCTTGCAAGGCGTTTTTCCATCATaGCCTCAAAAGACCCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: KWALSLPNHMQTSLPCLQGVFPS*PQKTLD Trigger: GTCCAGGGTCTTTTGAGGCAATGATGGAAAAACGCC...TTGCAAGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAGAGAGGGCCCACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CAA 90 bp | CACATGCAGACCAGCCTTCCCTGCTTGCAAAGTGCCCTCCCCAGGATGCTAGTATCAATGTCCTCGATTTaGCAGAGCAAGGCATCAGAA | + |
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Preference number: 5 (lower is better) Translates to: HMQTSLPCLQSALPRMLVSMSSI*QSKASE Trigger: TTCTGATGCCTTGCTCTGCAAAATCGAGGACATTGA...TACTAGCATCCTGGGGAGGGCACTTTGCAAGCAGGGAAGGCTGGTCTGCATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CAA 90 bp | CTAAGTCTCCTTTGGCTCCTCCTCATAGGTGGGCCATGCAGAGATAGACACCATTGGGAGAAGGACCCTTaGGAGCCAACTTTTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: LSLLWLLLIGGPCRDRHHWEKDP*EPTFPS Trigger: AGATGGAAAAGTTGGCTCCAAAGGGTCCTTCTCCCA...ATGGTGTCTATCTCTGCATGGCCCACCTATGAGGAGGAGCCAAAGGAGACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CAA 90 bp | CCCTCTCTCTTCCCAATCACATGCAGACCAGCCTTCCCTGCTTGCAAAGTGCCCGCTAGCCTATCGACCTaGTTTCAAATAAAGCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: PSLFPITCRPAFPACKVPASLST*FQIKLA Trigger: AGCAAGCTTTATTTGAAACAAGGTCGATAGGCTAGC...GGGCACTTTGCAAGCAGGGAAGGCTGGTCTGCATGTGATTGGGAAGAGAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CAA 90 bp | CTGATGTTTGGTGTCACACAAGCACAGGACAGCACTAAGTCTCCTTTGGCTCCTATAATACACCGCCATTaGAAGTGGGCCCTCTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: LMFGVTQAQDSTKSPLAPIIHRH*KWALSL Trigger: AAGAGAGAGGGCCCACTTCAAATGGCGGTGTATTAT...AGGAGCCAAAGGAGACTTAGTGCTGTCCTGTGCTTGTGTGACACCAAACATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CAA 90 bp | AGAGGGATGGGAGGGGGAGCTGTGTTTACGACACCTAAGTGCCATCAGGACATACTTGCATACTTATTCTaGATGGCCTGCAGAAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: RGMGGGAVFTTPKCHQDILAYLF*MACRSH Trigger: ATGACTTCTGCAGGCCATCAAGAATAAGTATGCAAG...TATGTCCTGATGGCACTTAGGTGTCGTAAACACAGCTCCCCCTCCCATCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS-3UTR CAA 90 bp | ATACTTATTCTTGATGGCCTGCAGAAGTCATTTGTGATTAAGCACATGTCAGGATTTGCCACCACACACTaGGTGAGCTCTGATGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: ILILDGLQKSFVIKHMSGFATTH*VSSDVW Trigger: CCAAACATCAGAGCTCACCAAGTGTGTGGTGGCAAA...TCCTGACATGTGCTTAATCACAAATGACTTCTGCAGGCCATCAAGAATAAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621385.1 |
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| CDS TCA 72 bp | TGGGAGAAGGACCCGTCGGGCGTCGGAGCAGCGCCATaGGGGACGGGGAAGGCAAGAGTGCCAGCCCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: WEKDPSGVGAAP*GTGKARVPARP Trigger: GGGCCGGGCTGGCACTCTTGCCTTCCCCGTCCCTCATGGCGCTGCTCCGACGCCCGACGGGTCCTTCTCCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559622.5 |
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| CDS TCA 72 bp | AATCACTGGACACCGTCGGGCGTCGGAGCAGCGCCATaGGGGACGGGGAAGGCAAGAGTGCCAGCCCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NHWTPSGVGAAP*GTGKARVPARP Trigger: GGGCCGGGCTGGCACTCTTGCCTTCCCCGTCCCTCATGGCGCTGCTCCGACGCCCGACGGTGTCCAGTGATT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000288207.7 ENST00000561077.1 |
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| CDS TCA 72 bp | CAAGAGTGCCAGCCCGGCCCAGGGAGGGACGCGGACTaGAAAGGGAGGACACTAGCGTACGAGGCGCCGTTA | + |
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Preference number: 6 (lower is better) Translates to: QECQPGPGRDAD*KGRTLAYEAPL Trigger: TAACGGCGCCTCGTACGCTAGTGTCCTCCCTTTTCAGTCCGCGTCCCTCCCTGGGCCGGGCTGGCACTCTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000288207.7 ENST00000559622.5 ENST00000561077.1 |
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| CDS CAA 72 bp | GGAAAAAGAAACATGAATAGCGCAAGACAGCCAGCGTaGTGGGACTCAGCACTATACAGAATCGGCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GKRNMNSARQPA*WDSALYRIGLC Trigger: ACAGAGGCCGATTCTGTATAGTGCTGAGTCCCACAACGCTGGCTGTCTTGCGCTATTCATGTTTCTTTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561077.1 |
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| CDS CCA 72 bp | AAAAGAAACATGAATAGCGCAAGACAGCCAGCGTTGTaGGACTCAGCACTATACAGAATCGGCCTCTGTATT | + |
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Preference number: 6 (lower is better) Translates to: KRNMNSARQPAL*DSALYRIGLCI Trigger: AATACAGAGGCCGATTCTGTATAGTGCTGAGTCCCACAACGCTGGCTGTCTTGCGCTATTCATGTTTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561077.1 |
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