RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCNA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133101

Ensembl transcript IDs: ENST00000255465.7, ENST00000440264.5, ENST00000625767.1, ENST00000630422.2

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp CAACGTGCAGAAGCCTATGACGATTATTGGCACTTCTaGTATGGAGGTGAAGTTCTGGAAGTGCTTCCATTC +
Preference number: 3 (lower is better)
Translates to: QRAEAYDDYWHF*YGGEVLEVLPF
Trigger: GAATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCGGGCGTTCAGGCCCCTaGGGGCCCAACGGGCGACGG +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFGRSGP*GPNGRR
Trigger: CCGTCGCCCGTTGGGCCCTCAGGGGCCTGAACGCCC...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCGGGCGAGGTGGGGCTaGCCGCGGCCGTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHRARWG*PRPSAH
Trigger: GTGTGCAGACGGCCGCGGTCAGCCCCACCTCGCCCG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS-3UTR CCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGCTCTGCGGGGGATCCTaGCCCAGCGGGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWLCGGS*PSGALV
Trigger: CACCAGAGCCCCGCTGGGCCAGGATCCCCCGCAGAG...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGGCTCCCGGTGCATGTaGCCTGCGAGGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWGSRCM*PARRQR
Trigger: CCTCTGCCGCCTCGCAGGCCACATGCACCGGGAGCC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS-3UTR TCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGTCCTGCGCAACTGCGTaGAGCCGGCCCGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWSCATA*SRPGKA
Trigger: GGCTTTCCCGGGCCGGCTTCACGCAGTTGCGCAGGA...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS-3UTR CCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCTCTGCGGGGGATCCTaGCCCAGCGGGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCLCGGS*PSGALV
Trigger: CACCAGAGCCCCGCTGGGCCAGGATCCCCCGCAGAG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCTCCAGCTCCAGCTGTaGGTCTCCGCCCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHLQLQL*VSARAR
Trigger: CCTCGCCCGGGCGGAGACGCACAGCTGGAGCTGGAG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS-3UTR GCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGGGCTCCTGCGCAACTaGGTGAAGCCGGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKGLLRN*VKPARE
Trigger: TTCCCGGGCCGGCTTCACGCAGTTGCGCAGGAGCCC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCTCTGCGGGGGATCCTaGCCCAGCGGGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHLCGGS*PSGALV
Trigger: CACCAGAGCCCCGCTGGGCCAGGATCCCCCGCAGAG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATACTCGCCGCGACCCCTaGGCGTTCAGGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHTRRDP*AFRPLR
Trigger: CCTCAGGGGCCTGAACGCCCAGGGGTCGCGGCGAGT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCTGACTCGCTCCGGGTaGACTCGCCGCGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHLTRSG*TRRDPW
Trigger: CCAGGGGTCGCGGCGAGTCCACCCGGAGCGAGTCAG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS-3UTR TCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGGTCTCCATCCCAAGTaGCGAGCAGGGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWGLHPK*RAGCCA
Trigger: AGCGCAGCACCCTGCTCGTCACTTGGGATGGAGACC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255465.7
ENST00000625767.1
CDS-3UTR GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCTGACCGCGGCCGTCTaGACACGTCCCCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHLTAAV*TRPLWS
Trigger: GGACCAGAGGGGACGTGTGCAGACGGCCGCGGTCAG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS-3UTR GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCGGGGCTGCCCCAAGTaGAGTCGCGGCAGTGTTGCG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHRGCPK*SRGSVA
Trigger: CGCAACACTGCCGCGACTGCACTTGGGGCAGCCCCG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS-3UTR GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATTGCTGCTACGCTTCCTaGCGGGAGGCGGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHCCYAS*REAAGT
Trigger: CGTCCCAGCCGCCTCCCGGCAGGAAGCGTAGCAGCA...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS-3UTR CCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTCGCCCACCCCACGATaGCCCCGGCTTTGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFSPTPR*PRLWKG
Trigger: TCCCTTCCAAAGCCGGGGCCATCGTGGGGTGGGCGA...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS-3UTR GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCAGTCGCGGCAGTGTTaGGTCTCCATCGCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHQSRQC*VSIAGV
Trigger: GACCCCCGCGATGGAGACGCAACACTGCCGCGACTG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS-3UTR GCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTCAGACTCCACGGGCTaGTGCTACGCTTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFSDSTG*CYASCR
Trigger: CCGGCAGGAAGCGTAGCAGCAGCCCGTGGAGTCTGA...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCCAGCGGGGCTCTGGTaGGTATCTGACAAGCATCGG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCPAGLW*VSDKHR
Trigger: CCGATGCTTGTCAGATACTCACCAGAGCCCCGCTGG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCCCAGCGGGGCTCTGGTaGGTATCTGACAAGCATCGG +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFPAGLW*VSDKHR
Trigger: CCGATGCTTGTCAGATACTCACCAGAGCCCCGCTGG...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGATGCCATCCCCTCTCTaGCCGAGCAGCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWMPSPL*PSSCLC
Trigger: ACAGAGACAGCTGCTCGGTCAGAGAGGGGATGGCAT...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGCAGGAAGTGCAGGTCTaGCTTGAGTGTGCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWQEVQV*LECAGV
Trigger: GACACCGGCACACTCAAGTCAGACCTGCACTTCCTG...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCCAGGTTCTCAGTCCTaGCGCACACTCCTTGTCGCC +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKPGSQS*RTLLVA
Trigger: GGCGACAAGGAGTGTGCGTCAGGACTGAGAACCTGG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCCAGGTTCTCAGTCCTaGCGCACACTCCTTGTCGCC +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCPGSQS*RTLLVA
Trigger: GGCGACAAGGAGTGTGCGTCAGGACTGAGAACCTGG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGACTCCACGGGCTGCTaGAAGACGAAATCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWDSTGC*KTKSGS
Trigger: GCTCCCAGATTTCGTCTTCCAGCAGCCCGTGGAGTC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625767.1
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGCTCTGGTGAGTATCTaGCAAGCATCGGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKALVSI*QASGPR
Trigger: CCGAGGTCCCGATGCTTGTCAGATACTCACCAGAGC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCCAGCGGGGCTCTGGTaGGTATCTGACAAGCATCGG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHPAGLW*VSDKHR
Trigger: CCGATGCTTGTCAGATACTCACCAGAGCCCCGCTGG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCATGCCATCCCCTCTCTaGCCGAGCAGCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFMPSPL*PSSCLC
Trigger: ACAGAGACAGCTGCTCGGTCAGAGAGGGGATGGCAT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCATGCCATCCCCTCTCTaGCCGAGCAGCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCMPSPL*PSSCLC
Trigger: ACAGAGACAGCTGCTCGGTCAGAGAGGGGATGGCAT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCAGGAAGTGCAGGTCTaGCTTGAGTGTGCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCQEVQV*LECAGV
Trigger: GACACCGGCACACTCAAGTCAGACCTGCACTTCCTG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCAGGAAGTGCAGGTCTaGCTTGAGTGTGCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKQEVQV*LECAGV
Trigger: GACACCGGCACACTCAAGTCAGACCTGCACTTCCTG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCTGCAGGTGGCTCCATaGGGGACACACACAGGTACT +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKLQVAP*GTHTGT
Trigger: AGTACCTGTGTGTGTCCCTCATGGAGCCACCTGCAG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGAAGGGACTGTTTCCGTaGCCCGTTCTCCCAACAGCC +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKKGLFP*PVLPTA
Trigger: GGCTGTTGGGAGAACGGGTCACGGAAACAGTCCCTT...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS-3UTR GCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGTTGCTGCAGTGCATTaGTTCAGACTCCACGGGCTG +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWVAAVH*FRLHGL
Trigger: CAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAAC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCTGGAAGACGAAATCTaGGAGCCCCGGTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCLEDEI*EPRSFP
Trigger: TGGGAAGGACCGGGGCTCCCAGATTTCGTCTTCCAG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255465.7
ENST00000625767.1
CDS-3UTR CCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTCCACGGGCTGCTGCTaGAAGACGAAATCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCSTGCC*KTKSGS
Trigger: GCTCCCAGATTTCGTCTTCCAGCAGCAGCCCGTGGA...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255465.7
CDS-3UTR CCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTGTCAAACCCTTGCTTaGGGGGCTCTTGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCCQTLA*GALGPH
Trigger: GTGGGGTCCAAGAGCCCCCCAAGCAAGGGTTTGACA...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATGCTCTGGTGAGTATCTaGCAAGCATCGGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHALVSI*QASGPR
Trigger: CCGAGGTCCCGATGCTTGTCAGATACTCACCAGAGC...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATATGCCATCCCCTCTCTaGCCGAGCAGCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHMPSPL*PSSCLC
Trigger: ACAGAGACAGCTGCTCGGTCAGAGAGGGGATGGCAT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCAGGAAGTGCAGGTCTaGCTTGAGTGTGCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHQEVQV*LECAGV
Trigger: GACACCGGCACACTCAAGTCAGACCTGCACTTCCTG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCGCATGCCTTCCGTaGTGTCTGGCTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKCACLP*CLAASS
Trigger: TGAAGAAGCAGCCAGACATCACGGAAGGCATGCGCA...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGCGCATGCCTTCCGTaGTGTCTGGCTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFCACLP*CLAASS
Trigger: TGAAGAAGCAGCCAGACATCACGGAAGGCATGCGCA...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGACCTGTCCAGGAAGTTaGCAGCCAGATACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWTCPGS*QPDTGS
Trigger: AGACCCTGTATCTGGCTGTCAACTTCCTGGACAGGT...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCTGCAGGTGGCTCCATaGGGGACACACACAGGTACT +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHLQVAP*GTHTGT
Trigger: AGTACCTGTGTGTGTCCCTCATGGAGCCACCTGCAG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGTCCAGGGTACATGATTaGGGGAAAGCCGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWSRVHD*GKAGLH
Trigger: ATGGAGACCGGCTTTCCCGCAATCATGTACCCTGGA...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255465.7
ENST00000625767.1
CDS-3UTR GCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGCTCCACTCTTGGGGTTaGTGCAGTGCATTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWLHSWG*CSALLQ
Trigger: CTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAG...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCTGGAAGACGAAATCTaGGAGCCCCGGTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHLEDEI*EPRSFP
Trigger: TGGGAAGGACCGGGGCTCCCAGATTTCGTCTTCCAG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255465.7
ENST00000625767.1
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATTGTCAAACCCTTGCTTaGGGGGCTCTTGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHCQTLA*GALGPH
Trigger: GTGGGGTCCAAGAGCCCCCCAAGCAAGGGTTTGACA...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATGCGGCAGAGGAGATGTaGGGATTTAGGGTCGCACGT +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHAAEEM*GFRVAR
Trigger: ACGTGCGACCCTAAATCCCCACATCTCCTCTGCCGC...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCAAGATCCAGGGTACATaGTTGCGGGAAAGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCKIQGT*LRESRS
Trigger: AGACCGGCTTTCCCGCAATCATGTACCCTGGATCTT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255465.7
ENST00000625767.1
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCAGTGCAGGTCTGACTTaGGTGTGCCGGTGTCTACTT +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFSAGLT*VCRCLL
Trigger: AAGTAGACACCGGCACACTCAAGTCAGACCTGCACT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCAGTGCAGGTCTGACTTaGGTGTGCCGGTGTCTACTT +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCSAGLT*VCRCLL
Trigger: AAGTAGACACCGGCACACTCAAGTCAGACCTGCACT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCTGGGAGAGGAGAGATaGATCTACCAGCATAGGGGA +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKLGEER*IYQHRG
Trigger: TCCCCTATGCTGGTAGATTCATCTCTCCTCTCCCAG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCCTGGGAGAGGAGAGATaGATCTACCAGCATAGGGGA +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFLGEER*IYQHRG
Trigger: TCCCCTATGCTGGTAGATTCATCTCTCCTCTCCCAG...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATTGCGCATGCCTTCCGTaGTGTCTGGCTGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHCACLP*CLAASS
Trigger: TGAAGAAGCAGCCAGACATCACGGAAGGCATGCGCA...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCACCTGTCCAGGAAGTTaGCAGCCAGATACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFTCPGS*QPDTGS
Trigger: AGACCCTGTATCTGGCTGTCAACTTCCTGGACAGGT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGTGTCGCCTCAAGTACTaGAGGAGAAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWCRLKY*RRNWLV
Trigger: CACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACA...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATGTTGCTGCAGTGCATTaGTTCAGACTCCACGGGCTG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHVAAVH*FRLHGL
Trigger: CAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAAC...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTTGGGGTTGCTGCAGTaGATTGCTTCAGACTCCACG +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFLGLLQ*IASDST
Trigger: CGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAA...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTGGGGTTGCTGCAGTaGATTGCTTCAGACTCCACG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCLGLLQ*IASDST
Trigger: CGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAA...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGCACTCTTGGGGTTGCTaGAGTGCATTGCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWHSWGC*SALLQT
Trigger: AGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTG...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCTCCACTCTTGGGGTTaGTGCAGTGCATTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCLHSWG*CSALLQ
Trigger: CTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCTCCACTCTTGGGGTTaGTGCAGTGCATTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKLHSWG*CSALLQ
Trigger: CTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCAGGTCCTCCTGTACTaGCCATTTGCAGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCQVLLY*PFAVSS
Trigger: GCTGCTAACTGCAAATGGGCAGTACAGGAGGACCTG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAGCCAAAAGCATAGCTaGTGTTCCTACGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWSQKHS*CSYELQ
Trigger: CTGCAGCTCGTAGGAACAGCAGCTATGCTTTTGGCT...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGCACAACTCCACTCTTaGGGTTGCTGCAGTGCATTG +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKAQLHS*GCCSAL
Trigger: CAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCATTCTTGTGATCCCCTaGCCACAGGTCCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFILVIP*PQVLLY
Trigger: GTACAGGAGGACCTGTGGCCAGGGGATCACAAGAAT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCATTCTTGTGATCCCCTaGCCACAGGTCCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCILVIP*PQVLLY
Trigger: GTACAGGAGGACCTGTGGCCAGGGGATCACAAGAAT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGCCTTCCGTGATGTCTaGCTGCTTCTTCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWAFRDV*LLLHVV
Trigger: CACTACATGAAGAAGCAGCCAGACATCACGGAAGGC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATAAGATCCAGGGTACATaGTTGCGGGAAAGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHKIQGT*LRESRS
Trigger: AGACCGGCTTTCCCGCAATCATGTACCCTGGATCTT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255465.7
ENST00000625767.1
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCTGGGAGAGGAGAGATaGATCTACCAGCATAGGGGA +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHLGEER*IYQHRG
Trigger: TCCCCTATGCTGGTAGATTCATCTCTCCTCTCCCAG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATACCTGTCCAGGAAGTTaGCAGCCAGATACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHTCPGS*QPDTGS
Trigger: AGACCCTGTATCTGGCTGTCAACTTCCTGGACAGGT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTGTCGCCTCAAGTACTaGAGGAGAAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCCRLKY*RRNWLV
Trigger: CACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACA...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGTCGCCTCAAGTACTaGAGGAGAAACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFCRLKY*RRNWLV
Trigger: CACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACA...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTCAAGGTACGCTTTATaGAGCTCACTCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKSRYAL*SSLRQG
Trigger: GCCTTGCCTGAGTGAGCTTCATAAAGCGTACCTTGA...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTCAAGGTACGCTTTATaGAGCTCACTCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFSRYAL*SSLRQG
Trigger: GCCTTGCCTGAGTGAGCTTCATAAAGCGTACCTTGA...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCACTCTTGGGGTTGCTaGAGTGCATTGCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCHSWGC*SALLQT
Trigger: AGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCAGGTCCTCCTGTACTaGCCATTTGCAGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHQVLLY*PFAVSS
Trigger: GCTGCTAACTGCAAATGGGCAGTACAGGAGGACCTG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAATCCAGCAGGAAGTaGAGGTCTGACTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWKSSRK*RSDLSV
Trigger: CACACTCAAGTCAGACCTGCACTTCCTGCTGGATTT...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGAGCCAAAAGCATAGCTaGTGTTCCTACGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKSQKHS*CSYELQ
Trigger: CTGCAGCTCGTAGGAACAGCAGCTATGCTTTTGGCT...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCAGCCAAAAGCATAGCTaGTGTTCCTACGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCSQKHS*CSYELQ
Trigger: CTGCAGCTCGTAGGAACAGCAGCTATGCTTTTGGCT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGTACTTCTCCCTAATTaGTTGCTGAGGTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKVLLPN*LLRSMG
Trigger: CCCCATCGACCTCAGCAAGCAATTAGGGAGAAGTAC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCGTACTTCTCCCTAATTaGTTGCTGAGGTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCVLLPN*LLRSMG
Trigger: CCCCATCGACCTCAGCAAGCAATTAGGGAGAAGTAC...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATGCACAACTCCACTCTTaGGGTTGCTGCAGTGCATTG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHAQLHS*GCCSAL
Trigger: CAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGC...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATATTCTTGTGATCCCCTaGCCACAGGTCCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHILVIP*PQVLLY
Trigger: GTACAGGAGGACCTGTGGCCAGGGGATCACAAGAAT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCGCCTTCCGTGATGTCTaGCTGCTTCTTCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCAFRDV*LLLHVV
Trigger: CACTACATGAAGAAGCAGCCAGACATCACGGAAGGC...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGCCTTCCGTGATGTCTaGCTGCTTCTTCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKAFRDV*LLLHVV
Trigger: CACTACATGAAGAAGCAGCCAGACATCACGGAAGGC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCGCCTTCCGTGATGTCTaGCTGCTTCTTCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFAFRDV*LLLHVV
Trigger: CACTACATGAAGAAGCAGCCAGACATCACGGAAGGC...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCAAGAAGAACTGCAGGTaGCTCCATGAGGGACACACA +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFKKNCR*LHEGHT
Trigger: TGTGTGTCCCTCATGGAGCCACCTGCAGTTCTTCTT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCAAGAAGAACTGCAGGTaGCTCCATGAGGGACACACA +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCKKNCR*LHEGHT
Trigger: TGTGTGTCCCTCATGGAGCCACCTGCAGTTCTTCTT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATTCAAGGTACGCTTTATaGAGCTCACTCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHSRYAL*SSLRQG
Trigger: GCCTTGCCTGAGTGAGCTTCATAAAGCGTACCTTGA...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTCCCTAATTGCTTGCTaGGGTCGATGGGGTATATCA +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFSLIAC*GRWGIS
Trigger: TGATATACCCCATCGACCTCAGCAAGCAATTAGGGA...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCCACACACAGGTACTTTaGAGCCTTGTACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFHTQVL*SLVLLP
Trigger: AGGGAGAAGTACAAGGCTTCAAAGTACCTGTGTGTG...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCACACACAGGTACTTTaGAGCCTTGTACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKHTQVL*SLVLLP
Trigger: AGGGAGAAGTACAAGGCTTCAAAGTACCTGTGTGTG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCACACACAGGTACTTTaGAGCCTTGTACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCHTQVL*SLVLLP
Trigger: AGGGAGAAGTACAAGGCTTCAAAGTACCTGTGTGTG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGACGTGCAGAAGCCTATaGCGATTATTGGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKTCRSL*RLLALL
Trigger: CAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGT...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCACGTGCAGAAGCCTATaGCGATTATTGGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFTCRSL*RLLALL
Trigger: CAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCATACACATCCTCAAATaGCATCCCCTCTCTGACCGA +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFIHILK*HPLSDR
Trigger: TCGGTCAGAGAGGGGATGGCATTTGAGGATGTGTAT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGATACACATCCTCAAATaGCATCCCCTCTCTGACCGA +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKIHILK*HPLSDR
Trigger: TCGGTCAGAGAGGGGATGGCATTTGAGGATGTGTAT...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCAAATCCAGCAGGAAGTaGAGGTCTGACTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFKSSRK*RSDLSV
Trigger: CACACTCAAGTCAGACCTGCACTTCCTGCTGGATTT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCAAATCCAGCAGGAAGTaGAGGTCTGACTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCKSSRK*RSDLSV
Trigger: CACACTCAAGTCAGACCTGCACTTCCTGCTGGATTT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGTTCACAGTATAGTTTaGCAGGCAAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWVHSIV*QAKSCC
Trigger: GCAGCAGCTTTTTGCCTGGCAAACTATACTGTGAAC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGAAGGAGAAACTGGTTaGTGGTTGGTACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWEGETG*WLVLSD
Trigger: ATCTGACAGTACCAACCACCAACCAGTTTCTCCTTC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGCAGCAAGGGTTTCTaGCCAAAAGTGCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFCSKGF*PKVLVH
Trigger: GTGAACAAGCACTTTTGGCCAGAAACCCTTGCTGCA...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCAGCAAGGGTTTCTaGCCAAAAGTGCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKCSKGF*PKVLVH
Trigger: GTGAACAAGCACTTTTGGCCAGAAACCCTTGCTGCA...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATAAGAAGAACTGCAGGTaGCTCCATGAGGGACACACA +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHKKNCR*LHEGHT
Trigger: TGTGTGTCCCTCATGGAGCCACCTGCAGTTCTTCTT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAGGGAAGGCATTTTCTaGTCCAGAATAACACCTGAT +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWREGIF*SRITPD
Trigger: ATCAGGTGTTATTCTGGATCAGAAAATGCCTTCCCT...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCAGAACAGACATACATaGAAGGAACCTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKQNRHT*KEPVQE
Trigger: TTCCTGGACAGGTTCCTTTCATGTATGTCTGTTCTG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCAGAACAGACATACATaGAAGGAACCTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCQNRHT*KEPVQE
Trigger: TTCCTGGACAGGTTCCTTTCATGTATGTCTGTTCTG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATTCCCTAATTGCTTGCTaGGGTCGATGGGGTATATCA +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHSLIAC*GRWGIS
Trigger: TGATATACCCCATCGACCTCAGCAAGCAATTAGGGA...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGATTATTGGCACTTCTaGTATGGAGGTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWDYWHF*YGGEVL
Trigger: CAGAACTTCACCTCCATATCAGAAGTGCCAATAATC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATACGTGCAGAAGCCTATaGCGATTATTGGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHTCRSL*RLLALL
Trigger: CAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGTAAACAACATTAGTTaGTCCAACGTGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWVNNIS*SNVQKP
Trigger: AGGCTTCTGCACGTTGGATCAACTAATGTTGTTTAC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATATACACATCCTCAAATaGCATCCCCTCTCTGACCGA +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHIHILK*HPLSDR
Trigger: TCGGTCAGAGAGGGGATGGCATTTGAGGATGTGTAT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCGTTCACAGTATAGTTTaGCAGGCAAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFVHSIV*QAKSCC
Trigger: GCAGCAGCTTTTTGCCTGGCAAACTATACTGTGAAC...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGTTCACAGTATAGTTTaGCAGGCAAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKVHSIV*QAKSCC
Trigger: GCAGCAGCTTTTTGCCTGGCAAACTATACTGTGAAC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCATCTGTGCCAAGACTaGATATATCTTCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKHLCQD*IYLQTG
Trigger: CCCAGTCTGAAGATATATCCAGTCTTGGCACAGATG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCATCTGTGCCAAGACTaGATATATCTTCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCHLCQD*IYLQTG
Trigger: CCCAGTCTGAAGATATATCCAGTCTTGGCACAGATG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAACTGGTTGGTGGTTaGTACTGTCAGATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWKLVGG*YCQIKS
Trigger: GCTTTTGATCTGACAGTACCAACCACCAACCAGTTT...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCGGAGAAACTGGTTGGTaGTTGGTACTGTCAGATCAA +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFGETGW*LVLSDQ
Trigger: TTGATCTGACAGTACCAACCACCAACCAGTTTCTCC...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGGAGAAACTGGTTGGTaGTTGGTACTGTCAGATCAA +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKGETGW*LVLSDQ
Trigger: TTGATCTGACAGTACCAACCACCAACCAGTTTCTCC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATTGCAGCAAGGGTTTCTaGCCAAAAGTGCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHCSKGF*PKVLVH
Trigger: GTGAACAAGCACTTTTGGCCAGAAACCCTTGCTGCA...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGAGGGAAGGCATTTTCTaGTCCAGAATAACACCTGAT +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKREGIF*SRITPD
Trigger: ATCAGGTGTTATTCTGGATCAGAAAATGCCTTCCCT...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCAGAACAGACATACATaGAAGGAACCTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHQNRHT*KEPVQE
Trigger: TTCCTGGACAGGTTCCTTTCATGTATGTCTGTTCTG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCGATTATTGGCACTTCTaGTATGGAGGTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCDYWHF*YGGEVL
Trigger: CAGAACTTCACCTCCATATCAGAAGTGCCAATAATC...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGTAAACAACATTAGTTaGTCCAACGTGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKVNNIS*SNVQKP
Trigger: AGGCTTCTGCACGTTGGATCAACTAATGTTGTTTAC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCTTCTTCATGTAGTGTaGTTTGGGTCTGTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCLLHVV*FGSVPY
Trigger: ATAAGGCACAGACCCAAAGCACACTACATGAAGAAG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCTTCTTCATGTAGTGTaGTTTGGGTCTGTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKLLHVV*FGSVPY
Trigger: ATAAGGCACAGACCCAAAGCACACTACATGAAGAAG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGCAGATACAGGGTCTCTaGTCGAAGTTTATATTCTTC +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWQIQGL*SKFIFF
Trigger: GAAGAATATAAACTTCGAGCAGAGACCCTGTATCTG...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCATCTGTGCCAAGACTaGATATATCTTCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHHLCQD*IYLQTG
Trigger: CCCAGTCTGAAGATATATCCAGTCTTGGCACAGATG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGAAACTGGTTGGTGGTTaGTACTGTCAGATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKKLVGG*YCQIKS
Trigger: GCTTTTGATCTGACAGTACCAACCACCAACCAGTTT...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATGAAGGAGAAACTGGTTaGTGGTTGGTACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHEGETG*WLVLSD
Trigger: ATCTGACAGTACCAACCACCAACCAGTTTCTCCTTC...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATAGGGAAGGCATTTTCTaGTCCAGAATAACACCTGAT +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHREGIF*SRITPD
Trigger: ATCAGGTGTTATTCTGGATCAGAAAATGCCTTCCCT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGTGTATGTATCATCGGTaGTATAGACAAACTCGTCTA +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWCMYHR*YRQTRL
Trigger: TAGACGAGTTTGTCTATATCACCGATGATACATACA...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATGATTATTGGCACTTCTaGTATGGAGGTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHDYWHF*YGGEVL
Trigger: CAGAACTTCACCTCCATATCAGAAGTGCCAATAATC...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCTTCTTCATGTAGTGTaGTTTGGGTCTGTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHLLHVV*FGSVPY
Trigger: ATAAGGCACAGACCCAAAGCACACTACATGAAGAAG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGTGAAGTTCTGGAAGTaGTTCCATTCAGAAACTTAT +
Preference number: 4 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWVKFWK*FHSETY
Trigger: ATAAGTTTCTGAATGGAAGCACTTCCAGAACTTCAC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATAAACTGGTTGGTGGTTaGTACTGTCAGATCAAAAGC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHKLVGG*YCQIKS
Trigger: GCTTTTGATCTGACAGTACCAACCACCAACCAGTTT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTGTATGTATCATCGGTaGTATAGACAAACTCGTCTA +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCCMYHR*YRQTRL
Trigger: TAGACGAGTTTGTCTATATCACCGATGATACATACA...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCAGATACAGGGTCTCTaGTCGAAGTTTATATTCTTC +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHQIQGL*SKFIFF
Trigger: GAAGAATATAAACTTCGAGCAGAGACCCTGTATCTG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGTGAAGTTCTGGAAGTaGTTCCATTCAGAAACTTAT +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKVKFWK*FHSETY
Trigger: ATAAGTTTCTGAATGGAAGCACTTCCAGAACTTCAC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR TCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATTGTATGTATCATCGGTaGTATAGACAAACTCGTCTA +
Preference number: 4 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHCMYHR*YRQTRL
Trigger: TAGACGAGTTTGTCTATATCACCGATGATACATACA...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCATTTATCACATCTGTaGCAAGACTGGATATATCTT +
Preference number: 4 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCHLSHL*QDWIYL
Trigger: AAGATATATCCAGTCTTGGCACAGATGTGATAAATG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCCATTTATCACATCTGTaGCAAGACTGGATATATCTT +
Preference number: 4 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFHLSHL*QDWIYL
Trigger: AAGATATATCCAGTCTTGGCACAGATGTGATAAATG...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR GCA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCATTTATCACATCTGTaGCAAGACTGGATATATCTT +
Preference number: 4 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKHLSHL*QDWIYL
Trigger: AAGATATATCCAGTCTTGGCACAGATGTGATAAATG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS GCA 90 bp CGGCAGTGTTGCGTCTCCATCGCGGGGGTCCTTGCGGGCCGCGCCTaGCCCGCCCGGCTCCCGGTGCATGTGGCCTGCGAGGCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: RQCCVSIAGVLAGRA*PARLPVHVACEAAE
Trigger: CTCTGCCGCCTCGCAGGCCACATGCACCGGGAGCCGGGCGGGGCAGGCGCGGCCCGCAAGGACCCCCGCGATGGAGACGCAACACTGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS CCA 90 bp CACGGGCTGCTGCTGACTCGCTCCGGGTGGACTCGCCGCGACCCCTaGGCGTTCAGGCCCCTGAGGGCCCAACGGGCGACGGCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: HGLLLTRSGWTRRDP*AFRPLRAQRATALQ
Trigger: CTGGAGGGCCGTCGCCCGTTGGGCCCTCAGGGGCCTGAACGCCCAGGGGTCGCGGCGAGTCCACCCGGAGCGAGTCAGCAGCAGCCCGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS GCA 90 bp TGCTGCTACGCTTCCTGCCGGGAGGCGGCTGGGACGCGGCGGGGCTaGCCCAAGTGCAGTCGCGGCAGTGTTGCGTCTCCATCGCGGGGG +
Preference number: 5 (lower is better)
Translates to: CCYASCREAAGTRRG*PKCSRGSVASPSRG
Trigger: CCCCCGCGATGGAGACGCAACACTGCCGCGACTGCACTTGGGGCAGCCCCGCCGCGTCCCAGCCGCCTCCCGGCAGGAAGCGTAGCAGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS CCA 90 bp GGGTCCTTGCGGGCCGCGCCTGCCCCGCCCGGCTCCCGGTGCATGTaGCCTGCGAGGCGGCAGAGGAGATGTGGGGATTTAGGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: GSLRAAPAPPGSRCM*PARRQRRCGDLGSH
Trigger: GTGCGACCCTAAATCCCCACATCTCCTCTGCCGCCTCGCAGGCCACATGCACCGGGAGCCGGGCGGGGCAGGCGCGGCCCGCAAGGACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS GCA 90 bp CTTGCGGGCCGCGCCTGCCCCGCCCGGCTCCCGGTGCATGTGGCCTaGGAGGCGGCAGAGGAGATGTGGGGATTTAGGGTCGCACGTCGT +
Preference number: 5 (lower is better)
Translates to: LAGRACPARLPVHVA*EAAEEMWGFRVARR
Trigger: ACGACGTGCGACCCTAAATCCCCACATCTCCTCTGCCGCCTCGCAGGCCACATGCACCGGGAGCCGGGCGGGGCAGGCGCGGCCCGCAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS TCA 90 bp AGATCCAGGGTACATGATTGCGGGAAAGCCGGTCTCCATCCCAAGTaGCGAGCAGGGTGCTGCGCTGCGGCCTCCTCCCACCAGACAGGA +
Preference number: 5 (lower is better)
Translates to: RSRVHDCGKAGLHPK*RAGCCAAASSHQTG
Trigger: TCCTGTCTGGTGGGAGGAGGCCGCAGCGCAGCACCCTGCTCGTCACTTGGGATGGAGACCGGCTTTCCCGCAATCATGTACCCTGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255465.7
ENST00000625767.1
CDS GCA 90 bp CGGGCCACTGTAGCCAGCACAACTCCACTCTTGGGGTTGCTGCAGTaGATTGCTTCAGACTCCACGGGCTGCTGCTACGCTTCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RATVASTTPLLGLLQ*IASDSTGCCYASCR
Trigger: CCGGCAGGAAGCGTAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS GCA 90 bp CACTGTAGCCAGCACAACTCCACTCTTGGGGTTGCTGCAGTGCATTaGTTCAGACTCCACGGGCTGCTGCTACGCTTCCTGCCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HCSQHNSTLGVAAVH*FRLHGLLLRFLPGG
Trigger: GCCTCCCGGCAGGAAGCGTAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS GCA 90 bp CACTGTAGCCAGCACAACTCCACTCTTGGGGTTGCTGCAGTGCATTaGTTCAGACTCCACGGGCTGCTGCTGACTCGCTCCGGGTGGACT +
Preference number: 5 (lower is better)
Translates to: HCSQHNSTLGVAAVH*FRLHGLLLTRSGWT
Trigger: AGTCCACCCGGAGCGAGTCAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS GCA 90 bp CGGGCCACTGTAGCCAGCACAACTCCACTCTTGGGGTTGCTGCAGTaGATTGCTTCAGACTCCACGGGCTGCTGGAAGACGAAATCTGGG +
Preference number: 5 (lower is better)
Translates to: RATVASTTPLLGLLQ*IASDSTGCWKTKSG
Trigger: CCCAGATTTCGTCTTCCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625767.1
CDS GCA 90 bp CGGGCCACTGTAGCCAGCACAACTCCACTCTTGGGGTTGCTGCAGTaGATTGCTTCAGACTCCACGGGCTGCTGCTGGAAGACGAAATCT +
Preference number: 5 (lower is better)
Translates to: RATVASTTPLLGLLQ*IASDSTGCCWKTKS
Trigger: AGATTTCGTCTTCCAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255465.7
CDS GCA 90 bp CACTGTAGCCAGCACAACTCCACTCTTGGGGTTGCTGCAGTGCATTaGTTCAGACTCCACGGGCTGCTGGAAGACGAAATCTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: HCSQHNSTLGVAAVH*FRLHGLLEDEIWEP
Trigger: GGGCTCCCAGATTTCGTCTTCCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625767.1
CDS GCA 90 bp CACTGTAGCCAGCACAACTCCACTCTTGGGGTTGCTGCAGTGCATTaGTTCAGACTCCACGGGCTGCTGCTGGAAGACGAAATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: HCSQHNSTLGVAAVH*FRLHGLLLEDEIWE
Trigger: CTCCCAGATTTCGTCTTCCAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255465.7
CDS-3UTR CAA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATGCAGTCGCGGCAGTGTaGCGTCTCCATCGCGGGGGT +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHAVAAV*RLHRGG
Trigger: ACCCCCGCGATGGAGACGCAACACTGCCGCGACTGC...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS TCA 90 bp GCCAGGTTCTCAGTCCTGACGCACACTCCTTGTCGCCTCAAGTACTaGAGGAGAAACTGGTTGGTGGTTGGTACTGTCAGATCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: ARFSVLTHTPCRLKY*RRNWLVVGTVRSKA
Trigger: AGCTTTTGATCTGACAGTACCAACCACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACAAGGAGTGTGCGTCAGGACTGAGAACCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGGGTTGCTGCAGTGCATaGCTTCAGACTCCACGGGCT +
Preference number: 5 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWGCCSA*LQTPRA
Trigger: AGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACC...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCACGATGGCCCCGGCTTaGGAAGGGACTGTTTCCGTG +
Preference number: 5 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFTMAPA*EGTVSV
Trigger: CACGGAAACAGTCCCTTCCAAAGCCGGGGCCATCGT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS-3UTR CAA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCGGTTGCTGCAGTGCATaGCTTCAGACTCCACGGGCT +
Preference number: 5 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCGCCSA*LQTPRA
Trigger: AGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACC...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGGTTGCTGCAGTGCATaGCTTCAGACTCCACGGGCT +
Preference number: 5 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKGCCSA*LQTPRA
Trigger: AGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGCCTGACGCACACTCCTaGTCGCCTCAAGTACTGAAG +
Preference number: 5 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWPDAHS*SPQVLK
Trigger: CTTCAGTACTTGAGGCGACAAGGAGTGTGCGTCAGG...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS TCA 90 bp CAGCATAGGGGAAACTGTGTTGAAATCCAGCAGGAAGTGCAGGTCTaGCTTGAGTGTGCCGGTGTCTACTTCATACACATCCTCAAATGC +
Preference number: 5 (lower is better)
Translates to: QHRGNCVEIQQEVQV*LECAGVYFIHILKC
Trigger: GCATTTGAGGATGTGTATGAAGTAGACACCGGCACACTCAAGTCAGACCTGCACTTCCTGCTGGATTTCAACACAGTTTCCCCTATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATGGTTGCTGCAGTGCATaGCTTCAGACTCCACGGGCT +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHGCCSA*LQTPRA
Trigger: AGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACC...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAGCACAACTCCACTCTaGGGGTTGCTGCAGTGCATT +
Preference number: 5 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWSTTPL*GLLQCI
Trigger: AATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCT...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCAGGTCTGACTaGAGTGTGCCGGTGTCTACT +
Preference number: 5 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWKCRSD*SVPVST
Trigger: AGTAGACACCGGCACACTCAAGTCAGACCTGCACTT...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCCTGACGCACACTCCTaGTCGCCTCAAGTACTGAAG +
Preference number: 5 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCPDAHS*SPQVLK
Trigger: CTTCAGTACTTGAGGCGACAAGGAGTGTGCGTCAGG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCACTCCACTCTTGGGGTaGCTGCAGTGCATTGCTTCA +
Preference number: 5 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCTPLLG*LQCIAS
Trigger: TGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCAGCACAACTCCACTCTaGGGGTTGCTGCAGTGCATT +
Preference number: 5 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCSTTPL*GLLQCI
Trigger: AATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTCCTGTACTGCCCATTaGCAGTTAGCAGCCCTAGCA +
Preference number: 5 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFSCTAH*QLAALA
Trigger: TGCTAGGGCTGCTAACTGCAAATGGGCAGTACAGGA...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTCCTGTACTGCCCATTaGCAGTTAGCAGCCCTAGCA +
Preference number: 5 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKSCTAH*QLAALA
Trigger: TGCTAGGGCTGCTAACTGCAAATGGGCAGTACAGGA...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCAAGTGCAGGTCTGACTaGAGTGTGCCGGTGTCTACT +
Preference number: 5 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCKCRSD*SVPVST
Trigger: AGTAGACACCGGCACACTCAAGTCAGACCTGCACTT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCAAGTGCAGGTCTGACTaGAGTGTGCCGGTGTCTACT +
Preference number: 5 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFKCRSD*SVPVST
Trigger: AGTAGACACCGGCACACTCAAGTCAGACCTGCACTT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCAACCTGTCCAGGAAGTaGACAGCCAGATACAGGGTC +
Preference number: 5 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCNLSRK*TARYRV
Trigger: GACCCTGTATCTGGCTGTCAACTTCCTGGACAGGTT...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCAACCTGTCCAGGAAGTaGACAGCCAGATACAGGGTC +
Preference number: 5 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFNLSRK*TARYRV
Trigger: GACCCTGTATCTGGCTGTCAACTTCCTGGACAGGTT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCCTGACGCACACTCCTaGTCGCCTCAAGTACTGAAG +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHPDAHS*SPQVLK
Trigger: CTTCAGTACTTGAGGCGACAAGGAGTGTGCGTCAGG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CCA 90 bp CGCACACTCCTTGTCGCCTCAAGTACTGAAGGAGAAACTGGTTGGTaGTTGGTACTGTCAGATCAAAAGCTAGAACTTTCAGAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: RTLLVASSTEGETGW*LVLSDQKLELSEAS
Trigger: ACTTGCTTCTGAAAGTTCTAGCTTTTGATCTGACAGTACCAACCACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACAAGGAGTGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATTCCTGTACTGCCCATTaGCAGTTAGCAGCCCTAGCA +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHSCTAH*QLAALA
Trigger: TGCTAGGGCTGCTAACTGCAAATGGGCAGTACAGGA...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATAAGTGCAGGTCTGACTaGAGTGTGCCGGTGTCTACT +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHKCRSD*SVPVST
Trigger: AGTAGACACCGGCACACTCAAGTCAGACCTGCACTT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp GTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGATAGGGGAAACTGTGTaGAAATCCAGCAGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: VQKPMTIIGTSDMEVKFWIGETV*KSSRKC
Trigger: GCACTTCCTGCTGGATTTCAACACAGTTTCCCCTAT...CCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATAACCTGTCCAGGAAGTaGACAGCCAGATACAGGGTC +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHNLSRK*TARYRV
Trigger: GACCCTGTATCTGGCTGTCAACTTCCTGGACAGGTT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCCTTCTCCCTAATTGCTaGCTGAGGTCGATGGGGTAT +
Preference number: 5 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFLLPNC*LRSMGY
Trigger: ATACCCCATCGACCTCAGCAAGCAATTAGGGAGAAG...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGCTTCTCCCTAATTGCTaGCTGAGGTCGATGGGGTAT +
Preference number: 5 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKLLPNC*LRSMGY
Trigger: ATACCCCATCGACCTCAGCAAGCAATTAGGGAGAAG...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCCTTCTCCCTAATTGCTaGCTGAGGTCGATGGGGTAT +
Preference number: 5 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCLLPNC*LRSMGY
Trigger: ATACCCCATCGACCTCAGCAAGCAATTAGGGAGAAG...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS TCA 90 bp ATCTGTGCCAAGACTGGATATATCTTCAGACTGGGAGAGGAGAGATaGATCTACCAGCATAGGGGAAACTGTGTTGAAATCCAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: ICAKTGYIFRLGEER*IYQHRGNCVEIQQE
Trigger: TTCCTGCTGGATTTCAACACAGTTTCCCCTATGCTGGTAGATTCATCTCTCCTCTCCCAGTCTGAAGATATATCCAGTCTTGGCACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS GCA 90 bp TCTTCATATTTCGAAGCCAAAAGCATAGCTGCTGTTCCTACGAGCTaGAGTTTCCCTCTCAGAACAGACATACATGAAAGGAACCTGTCC +
Preference number: 5 (lower is better)
Translates to: SSYFEAKSIAAVPTS*SFPLRTDIHERNLS
Trigger: GGACAGGTTCCTTTCATGTATGTCTGTTCTGAGAGGGAAACTGCAGCTCGTAGGAACAGCAGCTATGCTTTTGGCTTCGAAATATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGATAGGGGAAACTGTGTaGAAATCCAGCAGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKIGETV*KSSRKC
Trigger: GCACTTCCTGCTGGATTTCAACACAGTTTCCCCTAT...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATCTTCTCCCTAATTGCTaGCTGAGGTCGATGGGGTAT +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHLLPNC*LRSMGY
Trigger: ATACCCCATCGACCTCAGCAAGCAATTAGGGAGAAG...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGACACACACAGGTACTTaGAAGCCTTGTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKTHTGT*KPCTSP
Trigger: GGGAGAAGTACAAGGCTTCAAAGTACCTGTGTGTGT...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCACACACACAGGTACTTaGAAGCCTTGTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFTHTGT*KPCTSP
Trigger: GGGAGAAGTACAAGGCTTCAAAGTACCTGTGTGTGT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATATAGGGGAAACTGTGTaGAAATCCAGCAGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHIGETV*KSSRKC
Trigger: GCACTTCCTGCTGGATTTCAACACAGTTTCCCCTAT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGGAAACTGGTTGGTGGTaGGTACTGTCAGATCAAAAG +
Preference number: 5 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKETGWW*VLSDQK
Trigger: CTTTTGATCTGACAGTACCAACCACCAACCAGTTTC...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCGAAACTGGTTGGTGGTaGGTACTGTCAGATCAAAAG +
Preference number: 5 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFETGWW*VLSDQK
Trigger: CTTTTGATCTGACAGTACCAACCACCAACCAGTTTC...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTGTTCACAGTATAGTTaGCCAGGCAAAAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KPMTIIGTSDMEVKFWKCCSQYS*PGKKLL
Trigger: CAGCAGCTTTTTGCCTGGCAAACTATACTGTGAACA...GCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGTTCACAGTATAGTTaGCCAGGCAAAAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKCSQYS*PGKKLL
Trigger: CAGCAGCTTTTTGCCTGGCAAACTATACTGTGAACA...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATACACACACAGGTACTTaGAAGCCTTGTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHTHTGT*KPCTSP
Trigger: GGGAGAAGTACAAGGCTTCAAAGTACCTGTGTGTGT...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTGCTTCCATTGTTCACAGTATAGTTaGCCAGGCAAAAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWKCFHCSQYS*PGKKLL
Trigger: CAGCAGCTTTTTGCCTGGCAAACTATACTGTGAACA...ATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp AACGTGCAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCAGGTACTTTGAAGCCTaGTACTTCTCCCTAATTGCT +
Preference number: 5 (lower is better)
Translates to: NVQKPMTIIGTSDMEVKFRYFEA*YFSLIA
Trigger: AGCAATTAGGGAGAAGTACAAGGCTTCAAAGTACCT...GAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTGCACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS-3UTR CAA 90 bp CAGAAGCCTATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGAGGTACTTTGAAGCCTaGTACTTCTCCCTAATTGCT +
Preference number: 5 (lower is better)
Translates to: QKPMTIIGTSDMEVKFWKRYFEA*YFSLIA
Trigger: AGCAATTAGGGAGAAGTACAAGGCTTCAAAGTACCT...CTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCATAGGCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS GCA 90 bp ATGACGATTATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTaGTTCCATTCAGAAACTTATTGTAGAAGAAGAACTGCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: MTIIGTSDMEVKFWK*FHSETYCRRRTAGG
Trigger: GCCACCTGCAGTTCTTCTTCTACAATAAGTTTCTGAATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAATAATCGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CCA 90 bp TTTCTTCAGCATATTCAGTCACATTTATCACATCTGTGCCAAGACTaGATATATCTTCAGACTGGGAGAGGAGAGATGAATCTACCAGCA +
Preference number: 5 (lower is better)
Translates to: FLQHIQSHLSHLCQD*IYLQTGRGEMNLPA
Trigger: TGCTGGTAGATTCATCTCTCCTCTCCCAGTCTGAAGATATATCCAGTCTTGGCACAGATGTGATAAATGTGACTGAATATGCTGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS GCA 90 bp ACTGATAAATTTCTTCAGCATATTCAGTCACATTTATCACATCTGTaGCAAGACTGGATATATCTTCAGACTGGGAGAGGAGAGATGAAT +
Preference number: 5 (lower is better)
Translates to: TDKFLQHIQSHLSHL*QDWIYLQTGRGEMN
Trigger: ATTCATCTCTCCTCTCCCAGTCTGAAGATATATCCAGTCTTGGCACAGATGTGATAAATGTGACTGAATATGCTGAAGAAATTTATCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS TCA 90 bp AGTGTTCCATTTTTAACAGTTGTCGTTTTGTGTATGTATCATCGGTaGTATAGACAAACTCGTCTACTTCAGGAGGATATATCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: SVPFLTVVVLCMYHR*YRQTRLLQEDISLH
Trigger: ATGAAGAGATATATCCTCCTGAAGTAGACGAGTTTGTCTATATCACCGATGATACATACACAAAACGACAACTGTTAAAAATGGAACACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS GCA 72 bp TGCGTCTCCATCGCGGGGGTCCTTGCGGGCCGCGCCTaGCCCGCCCGGCTCCCGGTGCATGTGGCCTGCGAG +
Preference number: 6 (lower is better)
Translates to: CVSIAGVLAGRA*PARLPVHVACE
Trigger: CTCGCAGGCCACATGCACCGGGAGCCGGGCGGGGCAGGCGCGGCCCGCAAGGACCCCCGCGATGGAGACGCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS GCA 72 bp CGGGAGGCGGCTGGGACGCGGCGGGGCTGCCCCAAGTaGAGTCGCGGCAGTGTTGCGTCTCCATCGCGGGGG +
Preference number: 6 (lower is better)
Translates to: REAAGTRRGCPK*SRGSVASPSRG
Trigger: CCCCCGCGATGGAGACGCAACACTGCCGCGACTGCACTTGGGGCAGCCCCGCCGCGTCCCAGCCGCCTCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS CCA 72 bp CACGGGCTGCTGCTACGCTTCCTGCCGGGAGGCGGCTaGGACGCGGCGGGGCTGCCCCAAGTGCAGTCGCGG +
Preference number: 6 (lower is better)
Translates to: HGLLLRFLPGGG*DAAGLPQVQSR
Trigger: CCGCGACTGCACTTGGGGCAGCCCCGCCGCGTCCCAGCCGCCTCCCGGCAGGAAGCGTAGCAGCAGCCCGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS CCA 72 bp CTGCTGACTCGCTCCGGGTGGACTCGCCGCGACCCCTaGGCGTTCAGGCCCCTGAGGGCCCAACGGGCGACG +
Preference number: 6 (lower is better)
Translates to: LLTRSGWTRRDP*AFRPLRAQRAT
Trigger: CGTCGCCCGTTGGGCCCTCAGGGGCCTGAACGCCCAGGGGTCGCGGCGAGTCCACCCGGAGCGAGTCAGCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS CAA 90 bp CCCAAGTGCAGTCGCGGCAGTGTTGCGTCTCCATCGCGGGGGTCCTaGCGGGCCGCGCCTGCCCCGCCCGGCTCCCGGTGCATGTGGCCT +
Preference number: 6 (lower is better)
Translates to: PKCSRGSVASPSRGS*RAAPAPPGSRCMWP
Trigger: AGGCCACATGCACCGGGAGCCGGGCGGGGCAGGCGCGGCCCGCAAGGACCCCCGCGATGGAGACGCAACACTGCCGCGACTGCACTTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS GCA 72 bp GCTTCCTGCCGGGAGGCGGCTGGGACGCGGCGGGGCTaGCCCAAGTGCAGTCGCGGCAGTGTTGCGTCTCCA +
Preference number: 6 (lower is better)
Translates to: ASCREAAGTRRG*PKCSRGSVASP
Trigger: TGGAGACGCAACACTGCCGCGACTGCACTTGGGGCAGCCCCGCCGCGTCCCAGCCGCCTCCCGGCAGGAAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS GCA 72 bp CGCGCCTGCCCCGCCCGGCTCCCGGTGCATGTGGCCTaGGAGGCGGCAGAGGAGATGTGGGGATTTAGGGTC +
Preference number: 6 (lower is better)
Translates to: RACPARLPVHVA*EAAEEMWGFRV
Trigger: GACCCTAAATCCCCACATCTCCTCTGCCGCCTCGCAGGCCACATGCACCGGGAGCCGGGCGGGGCAGGCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS CCA 72 bp TTCAGACTCCACGGGCTGCTGCTGACTCGCTCCGGGTaGACTCGCCGCGACCCCTGGGCGTTCAGGCCCCTG +
Preference number: 6 (lower is better)
Translates to: FRLHGLLLTRSG*TRRDPWAFRPL
Trigger: CAGGGGCCTGAACGCCCAGGGGTCGCGGCGAGTCCACCCGGAGCGAGTCAGCAGCAGCCCGTGGAGTCTGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS TCA 72 bp GGGGGATCCTGGCCCAGCGGGGCTCTGGTGAGTATCTaGCAAGCATCGGGACCTCGGGCCACTGTAGCCAGC +
Preference number: 6 (lower is better)
Translates to: GGSWPSGALVSI*QASGPRATVAS
Trigger: GCTGGCTACAGTGGCCCGAGGTCCCGATGCTTGTCAGATACTCACCAGAGCCCCGCTGGGCCAGGATCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS GCA 72 bp CGGTCTCCATCCCAAGTGACGAGCAGGGTGCTGCGCTaGGGCCTCCTCCCACCAGACAGGAGGCCCCAAAAC +
Preference number: 6 (lower is better)
Translates to: RSPSQVTSRVLR*GLLPPDRRPQN
Trigger: GTTTTGGGGCCTCCTGTCTGGTGGGAGGAGGCCGCAGCGCAGCACCCTGCTCGTCACTTGGGATGGAGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255465.7
ENST00000625767.1
CDS CAA 72 bp GAGGGCGGACTCGCCCACCCCACGATGGCCCCGGCTTaGGAAGGGACTGTTTCCGTGACCCGTTCTCCCAAC +
Preference number: 6 (lower is better)
Translates to: EGGLAHPTMAPA*EGTVSVTRSPN
Trigger: GTTGGGAGAACGGGTCACGGAAACAGTCCCTTCCAAAGCCGGGGCCATCGTGGGGTGGGCGAGTCCGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS TCA 72 bp GTACATGATTGCGGGAAAGCCGGTCTCCATCCCAAGTaGCGAGCAGGGTGCTGCGCTGCGGCCTCCTCCCAC +
Preference number: 6 (lower is better)
Translates to: VHDCGKAGLHPK*RAGCCAAASSH
Trigger: GTGGGAGGAGGCCGCAGCGCAGCACCCTGCTCGTCACTTGGGATGGAGACCGGCTTTCCCGCAATCATGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255465.7
ENST00000625767.1
CDS TCA 72 bp CCACGATGGCCCCGGCTTTGGAAGGGACTGTTTCCGTaGCCCGTTCTCCCAACAGCCGCTAACAACCCCCTC +
Preference number: 6 (lower is better)
Translates to: PRWPRLWKGLFP*PVLPTAANNPL
Trigger: GAGGGGGTTGTTAGCGGCTGTTGGGAGAACGGGTCACGGAAACAGTCCCTTCCAAAGCCGGGGCCATCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS CAA 90 bp TCGGGACCTCGGGCCACTGTAGCCAGCACAACTCCACTCTTGGGGTaGCTGCAGTGCATTGCTTCAGACTCCACGGGCTGCTGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SGPRATVASTTPLLG*LQCIASDSTGCCWK
Trigger: CTTCCAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCGAGGTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255465.7
CDS CAA 90 bp CAAGCATCGGGACCTCGGGCCACTGTAGCCAGCACAACTCCACTCTaGGGGTTGCTGCAGTGCATTGCTTCAGACTCCACGGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: QASGPRATVASTTPL*GLLQCIASDSTGCC
Trigger: GCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCGAGGTCCCGATGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000630422.2
CDS CAA 90 bp TCGGGACCTCGGGCCACTGTAGCCAGCACAACTCCACTCTTGGGGTaGCTGCAGTGCATTGCTTCAGACTCCACGGGCTGCTGGAAGACG +
Preference number: 6 (lower is better)
Translates to: SGPRATVASTTPLLG*LQCIASDSTGCWKT
Trigger: CGTCTTCCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCGAGGTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625767.1
CDS CAA 90 bp CAAGCATCGGGACCTCGGGCCACTGTAGCCAGCACAACTCCACTCTaGGGGTTGCTGCAGTGCATTGCTTCAGACTCCACGGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: QASGPRATVASTTPL*GLLQCIASDSTGCW
Trigger: CCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCGAGGTCCCGATGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625767.1
CDS CAA 90 bp TCGGGACCTCGGGCCACTGTAGCCAGCACAACTCCACTCTTGGGGTaGCTGCAGTGCATTGCTTCAGACTCCACGGGCTGCTGCTACGCT +
Preference number: 6 (lower is better)
Translates to: SGPRATVASTTPLLG*LQCIASDSTGCCYA
Trigger: AGCGTAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCGAGGTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS CAA 72 bp CGGGCCACTGTAGCCAGCACAACTCCACTCTTGGGGTaGCTGCAGTGCATTGCTTCAGACTCCACGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RATVASTTPLLG*LQCIASDSTGC
Trigger: GCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS GCA 72 bp CAGCACAACTCCACTCTTGGGGTTGCTGCAGTGCATTaGTTCAGACTCCACGGGCTGCTGCTGACTCGCTCC +
Preference number: 6 (lower is better)
Translates to: QHNSTLGVAAVH*FRLHGLLLTRS
Trigger: GGAGCGAGTCAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS CAA 72 bp GGACCTCGGGCCACTGTAGCCAGCACAACTCCACTCTaGGGGTTGCTGCAGTGCATTGCTTCAGACTCCACG +
Preference number: 6 (lower is better)
Translates to: GPRATVASTTPL*GLLQCIASDST
Trigger: CGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTACAGTGGCCCGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CAA 72 bp CCAGCACAACTCCACTCTTGGGGTTGCTGCAGTGCATaGCTTCAGACTCCACGGGCTGCTGCTGACTCGCTC +
Preference number: 6 (lower is better)
Translates to: PAQLHSWGCCSA*LQTPRAAADSL
Trigger: GAGCGAGTCAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440264.5
CDS GCA 72 bp GTAGCCAGCACAACTCCACTCTTGGGGTTGCTGCAGTaGATTGCTTCAGACTCCACGGGCTGCTGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: VASTTPLLGLLQ*IASDSTGCCWK
Trigger: CTTCCAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255465.7
CDS GCA 72 bp GTAGCCAGCACAACTCCACTCTTGGGGTTGCTGCAGTaGATTGCTTCAGACTCCACGGGCTGCTGGAAGACG +
Preference number: 6 (lower is better)
Translates to: VASTTPLLGLLQ*IASDSTGCWKT
Trigger: CGTCTTCCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625767.1
CDS GCA 72 bp CAGCACAACTCCACTCTTGGGGTTGCTGCAGTGCATTaGTTCAGACTCCACGGGCTGCTGCTACGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: QHNSTLGVAAVH*FRLHGLLLRFL
Trigger: CAGGAAGCGTAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS GCA 72 bp GTAGCCAGCACAACTCCACTCTTGGGGTTGCTGCAGTaGATTGCTTCAGACTCCACGGGCTGCTGCTACGCT +
Preference number: 6 (lower is better)
Translates to: VASTTPLLGLLQ*IASDSTGCCYA
Trigger: AGCGTAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630422.2
CDS CCA 72 bp TTCAGACTCCACGGGCTGCTGCTGGAAGACGAAATCTaGGAGCCCCGGTCCTTCCCAGCTGAGATACTCTTC +
Preference number: 6 (lower is better)
Translates to: FRLHGLLLEDEI*EPRSFPAEILF
Trigger: GAAGAGTATCTCAGCTGGGAAGGACCGGGGCTCCCAGATTTCGTCTTCCAGCAGCAGCCCGTGGAGTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255465.7
CDS CCA 72 bp TGCTTCAGACTCCACGGGCTGCTGGAAGACGAAATCTaGGAGCCCCGGTCCTTCCCAGCTGAGATACTCTTC +
Preference number: 6 (lower is better)
Translates to: CFRLHGLLEDEI*EPRSFPAEILF
Trigger: GAAGAGTATCTCAGCTGGGAAGGACCGGGGCTCCCAGATTTCGTCTTCCAGCAGCCCGTGGAGTCTGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625767.1
CDS GCA 72 bp CAGCACAACTCCACTCTTGGGGTTGCTGCAGTGCATTaGTTCAGACTCCACGGGCTGCTGCTGGAAGACGAA +
Preference number: 6 (lower is better)
Translates to: QHNSTLGVAAVH*FRLHGLLLEDE
Trigger: TTCGTCTTCCAGCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255465.7
CDS GCA 72 bp CAGCACAACTCCACTCTTGGGGTTGCTGCAGTGCATTaGTTCAGACTCCACGGGCTGCTGGAAGACGAAATC +
Preference number: 6 (lower is better)
Translates to: QHNSTLGVAAVH*FRLHGLLEDEI
Trigger: GATTTCGTCTTCCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625767.1
CDS CAA 72 bp CCAGCACAACTCCACTCTTGGGGTTGCTGCAGTGCATaGCTTCAGACTCCACGGGCTGCTGGAAGACGAAAT +
Preference number: 6 (lower is better)
Translates to: PAQLHSWGCCSA*LQTPRAAGRRN
Trigger: ATTTCGTCTTCCAGCAGCCCGTGGAGTCTGAAGCAATGCACTGCAGCAACCCCAAGAGTGGAGTTGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625767.1
CDS CCA 72 bp GCTCTAGTTCATCCATGTAGATGTCAAACCCTTGCTTaGGGGGCTCTTGGACCCCACAGTCAGGGAGTGCTT +
Preference number: 6 (lower is better)
Translates to: ALVHPCRCQTLA*GALGPHSQGVL
Trigger: AAGCACTCCCTGACTGTGGGGTCCAAGAGCCCCCCAAGCAAGGGTTTGACATCTACATGGATGAACTAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CAA 90 bp CTCTGCTACGTACTTAGCCAGGTTCTCAGTCCTGACGCACACTCCTaGTCGCCTCAAGTACTGAAGGAGAAACTGGTTGGTGGTTGGTAC +
Preference number: 6 (lower is better)
Translates to: LCYVLSQVLSPDAHS*SPQVLKEKLVGGWY
Trigger: GTACCAACCACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACAAGGAGTGTGCGTCAGGACTGAGAACCTGGCTAAGTACGTAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS TCA 72 bp TCAGTCCTGACGCACACTCCTTGTCGCCTCAAGTACTaGAGGAGAAACTGGTTGGTGGTTGGTACTGTCAGA +
Preference number: 6 (lower is better)
Translates to: SVLTHTPCRLKY*RRNWLVVGTVR
Trigger: TCTGACAGTACCAACCACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACAAGGAGTGTGCGTCAGGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CAA 72 bp GTACTTAGCCAGGTTCTCAGTCCTGACGCACACTCCTaGTCGCCTCAAGTACTGAAGGAGAAACTGGTTGGT +
Preference number: 6 (lower is better)
Translates to: VLSQVLSPDAHS*SPQVLKEKLVG
Trigger: ACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACAAGGAGTGTGCGTCAGGACTGAGAACCTGGCTAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS GCA 72 bp AGCATAGGGGAAACTGTGTTGAAATCCAGCAGGAAGTaGAGGTCTGACTTGAGTGTGCCGGTGTCTACTTCA +
Preference number: 6 (lower is better)
Translates to: SIGETVLKSSRK*RSDLSVPVSTS
Trigger: TGAAGTAGACACCGGCACACTCAAGTCAGACCTGCACTTCCTGCTGGATTTCAACACAGTTTCCCCTATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS TCA 72 bp GGAAACTGTGTTGAAATCCAGCAGGAAGTGCAGGTCTaGCTTGAGTGTGCCGGTGTCTACTTCATACACATC +
Preference number: 6 (lower is better)
Translates to: GNCVEIQQEVQV*LECAGVYFIHI
Trigger: GATGTGTATGAAGTAGACACCGGCACACTCAAGTCAGACCTGCACTTCCTGCTGGATTTCAACACAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CAA 90 bp ATAGGGGAAACTGTGTTGAAATCCAGCAGGAAGTGCAGGTCTGACTaGAGTGTGCCGGTGTCTACTTCATACACATCCTCAAATGCCATC +
Preference number: 6 (lower is better)
Translates to: IGETVLKSSRKCRSD*SVPVSTSYTSSNAI
Trigger: GATGGCATTTGAGGATGTGTATGAAGTAGACACCGGCACACTCAAGTCAGACCTGCACTTCCTGCTGGATTTCAACACAGTTTCCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS TCA 72 bp GAACAGACATACATGAAAGGAACCTGTCCAGGAAGTTaGCAGCCAGATACAGGGTCTCTGCTCGAAGTTTAT +
Preference number: 6 (lower is better)
Translates to: EQTYMKGTCPGS*QPDTGSLLEVY
Trigger: ATAAACTTCGAGCAGAGACCCTGTATCTGGCTGTCAACTTCCTGGACAGGTTCCTTTCATGTATGTCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CCA 72 bp CTCCTTGTCGCCTCAAGTACTGAAGGAGAAACTGGTTaGTGGTTGGTACTGTCAGATCAAAAGCTAGAACTT +
Preference number: 6 (lower is better)
Translates to: LLVASSTEGETG*WLVLSDQKLEL
Trigger: AAGTTCTAGCTTTTGATCTGACAGTACCAACCACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CAA 72 bp AGAACAGACATACATGAAAGGAACCTGTCCAGGAAGTaGACAGCCAGATACAGGGTCTCTGCTCGAAGTTTA +
Preference number: 6 (lower is better)
Translates to: RTDIHERNLSRK*TARYRVSARSL
Trigger: TAAACTTCGAGCAGAGACCCTGTATCTGGCTGTCAACTTCCTGGACAGGTTCCTTTCATGTATGTCTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CAA 90 bp ACACTCCTTGTCGCCTCAAGTACTGAAGGAGAAACTGGTTGGTGGTaGGTACTGTCAGATCAAAAGCTAGAACTTTCAGAAGCAAGTGTT +
Preference number: 6 (lower is better)
Translates to: TLLVASSTEGETGWW*VLSDQKLELSEASV
Trigger: AACACTTGCTTCTGAAAGTTCTAGCTTTTGATCTGACAGTACCAACCACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACAAGGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CCA 72 bp CTTGTCGCCTCAAGTACTGAAGGAGAAACTGGTTGGTaGTTGGTACTGTCAGATCAAAAGCTAGAACTTTCA +
Preference number: 6 (lower is better)
Translates to: LVASSTEGETGW*LVLSDQKLELS
Trigger: TGAAAGTTCTAGCTTTTGATCTGACAGTACCAACCACCAACCAGTTTCTCCTTCAGTACTTGAGGCGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CAA 72 bp GTCGCCTCAAGTACTGAAGGAGAAACTGGTTGGTGGTaGGTACTGTCAGATCAAAAGCTAGAACTTTCAGAA +
Preference number: 6 (lower is better)
Translates to: VASSTEGETGWW*VLSDQKLELSE
Trigger: TTCTGAAAGTTCTAGCTTTTGATCTGACAGTACCAACCACCAACCAGTTTCTCCTTCAGTACTTGAGGCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS GCA 72 bp ATATATCTCTTCATATTTCGAAGCCAAAAGCATAGCTaGTGTTCCTACGAGCTGCAGTTTCCCTCTCAGAAC +
Preference number: 6 (lower is better)
Translates to: IYLFIFRSQKHS*CSYELQFPSQN
Trigger: GTTCTGAGAGGGAAACTGCAGCTCGTAGGAACAGCAGCTATGCTTTTGGCTTCGAAATATGAAGAGATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS CCA 72 bp CATATTCAGTCACATTTATCACATCTGTGCCAAGACTaGATATATCTTCAGACTGGGAGAGGAGAGATGAAT +
Preference number: 6 (lower is better)
Translates to: HIQSHLSHLCQD*IYLQTGRGEMN
Trigger: ATTCATCTCTCCTCTCCCAGTCTGAAGATATATCCAGTCTTGGCACAGATGTGATAAATGTGACTGAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS GCA 72 bp ATTGGCACTTCTGATATGGAGGTGAAGTTCTGGAAGTaGTTCCATTCAGAAACTTATTGTAGAAGAAGAACT +
Preference number: 6 (lower is better)
Translates to: IGTSDMEVKFWK*FHSETYCRRRT
Trigger: AGTTCTTCTTCTACAATAAGTTTCTGAATGGAAGCACTTCCAGAACTTCACCTCCATATCAGAAGTGCCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2
CDS TCA 72 bp TTTTTAACAGTTGTCGTTTTGTGTATGTATCATCGGTaGTATAGACAAACTCGTCTACTTCAGGAGGATATA +
Preference number: 6 (lower is better)
Translates to: FLTVVVLCMYHR*YRQTRLLQEDI
Trigger: TATATCCTCCTGAAGTAGACGAGTTTGTCTATATCACCGATGATACATACACAAAACGACAACTGTTAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255465.7
ENST00000440264.5
ENST00000625767.1
ENST00000630422.2