RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000064205

Ensembl transcript IDs: ENST00000190983.5, ENST00000372865.4, ENST00000372868.6, ENST00000465000.1, ENST00000471629.1, ENST00000497421.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTGGGCTAGAGGACCCTGGACACCTTGGCCAGCCTCCTAGGCAGTaGGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCT +
Preference number: 1 (lower is better)
Translates to: SGLEDPGHLGQPPRQ*VRGKGTRSCTSAIP
Trigger: AGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAAGGTGTCCAGGGTCCTCTAGCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR GCA 90 bp CGTGTTAATATTGGTGTTCTGCATGGTGGACCCAAGCTAAAGTGTTaGCTGCAGCCAAGGGCCTGGGCACGGACCATCTTCCATCAGCCC +
Preference number: 1 (lower is better)
Translates to: RVNIGVLHGGPKLKC*LQPRAWARTIFHQP
Trigger: GGGCTGATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGTCCACCATGCAGAACACCAATATTAACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR GCA 90 bp TTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCAGCACCTGCTaGAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAG +
Preference number: 1 (lower is better)
Translates to: FILPPEKWPVQPSTC*SLNIKGLLVPSLAQ
Trigger: CTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGCTGGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR GCA 90 bp CTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCAGCACCTaGTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCC +
Preference number: 1 (lower is better)
Translates to: LFILPPEKWPVQPST*CSLNIKGLLVPSLA
Trigger: GGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGCTGGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR CCA 90 bp TCCAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATaGCCAGTCCAGCCCAGCACCTGCTGCAGCCTCAATATTAAGGGA +
Preference number: 1 (lower is better)
Translates to: SRISVCLLFILPPEK*PVQPSTCCSLNIKG
Trigger: TCCCTTAATATTGAGGCTGCAGCAGGTGCTGGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR CCA 90 bp GGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGCACAGGGCCACCAGCTaGGGATGGTGGACACCGTGT +
Preference number: 2 (lower is better)
Translates to: GSELEERGLGLAPLPYLGHRATS*GWWTPC
Trigger: ACACGGTGTCCACCATCCCCAGCTGGTGGCCCTGTG...CCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR CAA 90 bp CAGTCCAGCCCAGCACCTGCTGCAGCCTCAATATTAAGGGACTGCTaGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCC +
Preference number: 2 (lower is better)
Translates to: QSSPAPAAASILRDC*SHLLPRGSRRESSP
Trigger: GGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGCTGGGCTGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR CCA 90 bp TTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCCACAGGGCCACCAGCTaGGGATGGTGGACACCGTGT +
Preference number: 2 (lower is better)
Translates to: LPRGSRRESSPVCMFDIGHRATS*GWWTPC
Trigger: ACACGGTGTCCACCATCCCCAGCTGGTGGCCCTGTG...GCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR-3UTR CCA 90 bp CCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGTGTGTAGGCAGGGAGTaGGCTAGAGGACCCTGGACA +
Preference number: 2 (lower is better)
Translates to: PISCPGEVGEKARPCACLCVGRE*ARGPWT
Trigger: TGTCCAGGGTCCTCTAGCCCACTCCCTGCCTACACA...CAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR GCA 90 bp CCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGAAGGGGACTAGGTCTTaGACCTCTGCCATACCTCGG +
Preference number: 2 (lower is better)
Translates to: PISCPGEVGEKARPCACLKGTRS*TSAIPR
Trigger: CCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTT...CAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR GCA 90 bp GCACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGCCCAAGCTAAAGTGTTaGCTGCAGCCAAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: APAAASILRDCLSHLLPRPKLKC*LQPRAW
Trigger: CCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGG...CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR-3UTR CCA 90 bp CGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCAGCTGCAGCCAAGGGCCTaGGCACGGACCATCTTCCAT +
Preference number: 2 (lower is better)
Translates to: RRESSPVCMFDIGCVCRQLQPRA*ARTIFH
Trigger: ATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAG...CTGCCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR CAA 90 bp GCACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTaGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTT +
Preference number: 2 (lower is better)
Translates to: APAAASILRDCLSHL*PRGSRRESSPVCMF
Trigger: AAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR GCA 90 bp AGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGCCCAAGCTAAAGTGTTaGCTGCAGCCAAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: SLNIKGLLVPSLAQGKSEPKLKC*LQPRAW
Trigger: CCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGG...CTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR-3UTR GCA 90 bp TTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGAAGGGGACTAGGTCTTaGACCTCTGCCATACCTCGG +
Preference number: 2 (lower is better)
Translates to: LRDCLSHLLPRGSRRESSKGTRS*TSAIPR
Trigger: CCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTT...CGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR CCA 90 bp AATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCACCAGCTGGGGATGGTaGACACCGTGTCCCCATTCC +
Preference number: 2 (lower is better)
Translates to: NLCVPSLHPTPRKMASPATSWGW*TPCPHS
Trigger: GGAATGGGGACACGGTGTCCACCATCCCCAGCTGGT...GGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR-3UTR GCA 90 bp ATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCAAGGGGACTAGGTCTTaGACCTCTGCCATACCTCGG +
Preference number: 2 (lower is better)
Translates to: ISVCLLFILPPEKWPVQPKGTRS*TSAIPR
Trigger: CCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTT...GGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR CCA 90 bp TCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAACCAGCTGGGGATGGTaGACACCGTGTCCCCATTCC +
Preference number: 2 (lower is better)
Translates to: SILRDCLSHLLPRGSRRETSWGW*TPCPHS
Trigger: GGAATGGGGACACGGTGTCCACCATCCCCAGCTGGT...TTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR-3UTR CCA 90 bp CCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGTGGTGTTCTGCATGGTaGACCCAAGCTAAAGTGTTG +
Preference number: 2 (lower is better)
Translates to: PISCPGEVGEKARPCACLWCSAW*TQAKVL
Trigger: CAACACTTTAGCTTGGGTCCACCATGCAGAACACCA...CAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR-3UTR TCA 90 bp GGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTCAGCCTCCTAGGCAGTaGGTTAGAGGAAAGGGGACT +
Preference number: 2 (lower is better)
Translates to: GSRRESSPVCMFDIGCVCQPPRQ*VRGKGT
Trigger: AGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTG...ACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR CCA 90 bp ACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCAGGCAGCGTGTATTGGTGTTCTGCATaGTGGACCCAAGCTAAAGTG +
Preference number: 2 (lower is better)
Translates to: TRSCTSAIPRDPDRPGSVYWCSA*WTQAKV
Trigger: CACTTTAGCTTGGGTCCACCATGCAGAACACCAATA...CACGCTGCCTGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR-3UTR CCA 90 bp CAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCATGTGTAGGCAGGGAGTaGGCTAGAGGACCCTGGACA +
Preference number: 2 (lower is better)
Translates to: QNLCVPSLHPTPRKMASPCVGRE*ARGPWT
Trigger: TGTCCAGGGTCCTCTAGCCCACTCCCTGCCTACACA...TGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR GCA 90 bp ACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGGAAAGCTCGCCCGTGTaGATGTTTGATATAGGCTGT +
Preference number: 2 (lower is better)
Translates to: TCCSLNIKGLLVPSLAQGESSPV*MFDIGC
Trigger: ACAGCCTATATCAAACATGCACACGGGCGAGCTTTC...CCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR CCA 90 bp TTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTTATTGGTGTTCTGCATaGTGGACCCAAGCTAAAGTG +
Preference number: 2 (lower is better)
Translates to: LASLLGSELEERGLGLAPYWCSA*WTQAKV
Trigger: CACTTTAGCTTGGGTCCACCATGCAGAACACCAATA...AGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR-3UTR GCA 90 bp GAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCTCAATATTAAGGGACTaGTTGTCCCATCTCTTGCCC +
Preference number: 2 (lower is better)
Translates to: ESLCAFSSSYPQKNGQSSSILRD*LSHLLP
Trigger: GGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGA...GCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR TCA 72 bp GAGGACCCTGGACACCTTGGCCAGCCTCCTAGGCAGTaGGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCT +
Preference number: 3 (lower is better)
Translates to: EDPGHLGQPPRQ*VRGKGTRSCTS
Trigger: AGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAAGGTGTCCAGGGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR GCA 72 bp ATTGGTGTTCTGCATGGTGGACCCAAGCTAAAGTGTTaGCTGCAGCCAAGGGCCTGGGCACGGACCATCTTC +
Preference number: 3 (lower is better)
Translates to: IGVLHGGPKLKC*LQPRAWARTIF
Trigger: GAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGTCCACCATGCAGAACACCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR GCA 72 bp AGCCCAGCACCTGCTGCAGCCTCAATATTAAGGGACTaGTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGA +
Preference number: 3 (lower is better)
Translates to: SPAPAAASILRD*LSHLLPRGSRR
Trigger: TCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR CAA 90 bp TGCCATACCTCGGGATCCAGACAGACCAGGCAGCGTGTTAATATTGGTGTTCTGACCCAAGCTAAAGTGTaGCCTGCAGCCAAGGGCCTG +
Preference number: 3 (lower is better)
Translates to: CHTSGSRQTRQRVNIGVLTQAKV*PAAKGL
Trigger: CAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGT...CAGAACACCAATATTAACACGCTGCCTGGTCTGTCTGGATCCCGAGGTATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR-3UTR CAA 90 bp ATCCAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTACCCAAGCTAAAGTGTaGCCTGCAGCCAAGGGCCTG +
Preference number: 3 (lower is better)
Translates to: IQNLCVPSLHPTPRKMASTQAKV*PAAKGL
Trigger: CAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGT...ACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR-3UTR CAA 90 bp CAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAATATTAAGGGACTGCTaGTCCCATCTCTTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: QNLCVPSLHPTPRKMASPILRDC*SHLLPR
Trigger: CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATAT...TGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR-3UTR CAA 90 bp AGATCCAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGGCAGCGTGTTAATATaGGTGTTCTGCATGGTGGAC +
Preference number: 3 (lower is better)
Translates to: RSRISVCLLFILPPEKWPGSVLI*VFCMVD
Trigger: GTCCACCATGCAGAACACCAATATTAACACGCTGCC...TGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR TCA 90 bp CTGCAGCCAAGGGCCTGGGCACGGACCATCTTCCATCAGCCCAGGGCCCAGGCAACAGCGGCACGCAGGTaGAGCCGCCGTCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LQPRAWARTIFHQPRAQATAARR*SRRPRS
Trigger: GCTGCGAGGACGGCGGCTTCACCTGCGTGCCGCTGT...TGCCTGGGCCCTGGGCTGATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp CTGCAGCCAAGGGCCTGGGCACGGACCATCTTCCATCAGCCCAGGGCCCAGGCAGGGGGCAGTCCCAGCTaGGCAGCCGCACATCCTCGC +
Preference number: 4 (lower is better)
Translates to: LQPRAWARTIFHQPRAQAGGSPS*AAAHPR
Trigger: GCGAGGATGTGCGGCTGCCCAGCTGGGACTGCCCCC...TGCCTGGGCCCTGGGCTGATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR GCA 90 bp CTGCAGCCAAGGGCCTGGGCACGGACCATCTTCCATCAGCCCAGGGCCCAGGCAAGCGGCAGCGGATGCTaGAGTGGGGCTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LQPRAWARTIFHQPRAQASGSGC*SGAGRS
Trigger: AGACCTTCCAGCCCCACTGCAGCATCCGCTGCCGCT...TGCCTGGGCCCTGGGCTGATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp CTGCAGCCAAGGGCCTGGGCACGGACCATCTTCCATCAGCCCAGGGCCCAGGCATGGGCTAGAGGACCCTaGACACCTTGGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQPRAWARTIFHQPRAQAWARGP*TPWPAS
Trigger: GGAGGCTGGCCAAGGTGTCCAGGGTCCTCTAGCCCA...TGCCTGGGCCCTGGGCTGATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR GCA 90 bp AGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCCGCAGCGGCAGCGGATaGTGCAGTGGGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RDCLSHLLPRGSRRESSPRSGSG*CSGAGR
Trigger: CCTTCCAGCCCCACTGCAGCATCCGCTGCCGCTGCG...GGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR GCA 90 bp CCTGCAGCCAAGGGCCTGGGCACGGACCATCTTCCATCAGCCCAGGGCCCAGGCAAGGGGACTAGGTCTTaGACCTCTGCCATACCTCGG +
Preference number: 4 (lower is better)
Translates to: PAAKGLGTDHLPSAQGPGKGTRS*TSAIPR
Trigger: CCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTT...GCCTGGGCCCTGGGCTGATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp CATGGTGGACCCAAGCTAAAGTGTTGCCTGCAGCCAAGGGCCTGGGCACGGACCCTGGCGTCGCAGACGTaGAGTTGGTCGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HGGPKLKCCLQPRAWARTLASQT*SWSQGS
Trigger: GGAGCCCTGCGACCAACTCCACGTCTGCGACGCCAG...GGTCCGTGCCCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGTCCACCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp TGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCGGTTGGACACCCGGGTaGCCATGCCCAGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: CLSHLLPRGSRRESSPVCGWTPG*PCPAHR
Trigger: CCTGTGGGCTGGGCATGGCCACCCGGGTGTCCAACC...GCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp CCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGGTGGACTGCGACCCCTaGAGGGTGGGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PISCPGEVGEKARPCACLVDCDP*RVGRAW
Trigger: CCAGGCCCTGCCCACCCTCCAGGGGTCGCAGTCCAC...CAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp CATGGTGGACCCAAGCTAAAGTGTTGCCTGCAGCCAAGGGCCTGGGCACGGACCACTCAGGGCAGCACTTaGCCAGGACCTCGACCCTCC +
Preference number: 4 (lower is better)
Translates to: HGGPKLKCCLQPRAWARTTQGST*PGPRPS
Trigger: GGAGGGTCGAGGTCCTGGGCAAGTGCTGCCCTGAGT...GGTCCGTGCCCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGTCCACCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp AGGACCCTGGACACCTTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACGGGCATCGGGGAGGTaGCCAGGGGCAGGTACATGG +
Preference number: 4 (lower is better)
Translates to: RTLDTLASLLGSELEERGRASGR*PGAGTW
Trigger: CCATGTACCTGCCCCTGGCCACCTCCCCGATGCCCG...TCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAAGGTGTCCAGGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCAGGCACAGGCGGCGCTaGGTCTCCAGTCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RDCLSHLLPRGSRRESSPRHRRR*VSSRQK
Trigger: CTTCTGCCGACTGGAGACCCAGCGCCGCCTGTGCCT...GGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCAGGTGGACTGCGACCCCTaGAGGGTGGGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ERGLGLAPLPYLGIQTDQVDCDP*RVGRAW
Trigger: CCAGGCCCTGCCCACCCTCCAGGGGTCGCAGTCCAC...CTGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp TGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCCCAGGGGCAGGTACATaGTGTCGGGCACAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CLSHLLPRGSRRESSPVCPGAGT*CRAQLG
Trigger: ACCCAGCTGTGCCCGACACCATGTACCTGCCCCTGG...GCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCATGGCAGACCAGGCCCTaGCTGGCGTCGCAGACGTGG +
Preference number: 4 (lower is better)
Translates to: GKGTRSCTSAIPRDPDRPWQTRP*LASQTW
Trigger: CCACGTCTGCGACGCCAGCCAGGGCCTGGTCTGCCA...TGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCACCCAGTCCCCCTCCTTaGCCGCACACCCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: GKGTRSCTSAIPRDPDRPPSPPP*PHTHSG
Trigger: CCCTGAGTGGGTGTGCGGCCAAGGAGGGGGACTGGG...TGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp ACCCTGGACACCTTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGGTTGGACACCCGGGTaGCCATGCCCAGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: TLDTLASLLGSELEERGLGWTPG*PCPAHR
Trigger: CCTGTGGGCTGGGCATGGCCACCCGGGTGTCCAACC...TAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAAGGTGTCCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp ACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTCGGCAGAAGCGGTTCTaGTTGGACACCCGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TACPISCPGEVGEKARPCRQKRF*LDTRVA
Trigger: GGCCACCCGGGTGTCCAACCAGAACCGCTTCTGCCG...ACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACGTGGACTGCGACCCCTaGAGGGTGGGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VRGKGTRSCTSAIPRDPDVDCDP*RVGRAW
Trigger: CCAGGCCCTGCCCACCCTCCAGGGGTCGCAGTCCAC...GTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp CATGGTGGACCCAAGCTAAAGTGTTGCCTGCAGCCAAGGGCCTGGGCACGGACCCTGCAGCCAAGGGCCTaGGCACGGACCATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: HGGPKLKCCLQPRAWARTLQPRA*ARTIFH
Trigger: ATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAG...GGTCCGTGCCCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGTCCACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR TCA 90 bp TGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCCTGGGTACGCACCTTTaGGAGGAGGCAGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: CLSHLLPRGSRRESSPVCLGTHL*EEAEEG
Trigger: TCCCTCCTCTGCCTCCTCTCAAAGGTGCGTACCCAG...GCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp TGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGACAGCGGCACGCAGGTaGAGCCGCCGTCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: CCSLNIKGLLVPSLAQGKTAARR*SRRPRS
Trigger: GCTGCGAGGACGGCGGCTTCACCTGCGTGCCGCTGT...CTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR GCA 90 bp AGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGGTGGGTCTTCGGTGTaGCTCTCATGTCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RDCLSHLLPRGSRRESSPGGSSV*LSCPLQ
Trigger: CTGCAGGGGACATGAGAGGCACACCGAAGACCCACC...GGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp ATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCCTCCCCCAGCCGCCGTaGACATACCCGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ISVCLLFILPPEKWPVQPLPQPP*TYPAAA
Trigger: GGCTGCTGCCGGGTATGTGCACGGCGGCTGGGGGAG...GGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp TTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACACTCCCCCAGCCGCCGTaGACATACCCGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LEERGLGLAPLPYLGIQTLPQPP*TYPAAA
Trigger: GGCTGCTGCCGGGTATGTGCACGGCGGCTGGGGGAG...TGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCAGAGGGTCCCCAGGCCGTaGTCCATTCTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ERGLGLAPLPYLGIQTDQRVPRP*SILGRG
Trigger: TCCCCTGCCCAGAATGGAGCACGGCCTGGGGACCCT...CTGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp TTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTACACCCGGGTGGCCATaGCCAGCCCACAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: LASLLGSELEERGLGLAPTPGWP*PAHRWS
Trigger: CGACCACCTGTGGGCTGGGCATGGCCACCCGGGTGT...AGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCCAGGGGCAGGTACATaGTGTCGGGCACAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KGLLVPSLAQGKSERKLAPGAGT*CRAQLG
Trigger: ACCCAGCTGTGCCCGACACCATGTACCTGCCCCTGG...GGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp ACCCTGGACACCTTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTATCGCAGACGTGGAGTTaGTCGCAGGGCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TLDTLASLLGSELEERGLSQTWS*SQGSPS
Trigger: GCTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGA...TAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAAGGTGTCCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp ACCCTGGACACCTTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTACTGGCGTCGCAGACGTaGAGTTGGTCGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TLDTLASLLGSELEERGLLASQT*SWSQGS
Trigger: GGAGCCCTGCGACCAACTCCACGTCTGCGACGCCAG...TAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAAGGTGTCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp TTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCGGTTGGACACCCGGGTaGCCATGCCCAGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPRGSRRESSPVCMFDIGGWTPG*PCPAHR
Trigger: CCTGTGGGCTGGGCATGGCCACCCGGGTGTCCAACC...GCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCACCAGCTGGGGATGGTaGACACCGTGTCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: RDCLSHLLPRGSRRESSPTSWGW*TPCPHS
Trigger: GGAATGGGGACACGGTGTCCACCATCCCCAGCTGGT...GGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp ACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTCACAGGGCCACCAGCTaGGGATGGTGGACACCGTGT +
Preference number: 4 (lower is better)
Translates to: TACPISCPGEVGEKARPCHRATS*GWWTPC
Trigger: ACACGGTGTCCACCATCCCCAGCTGGTGGCCCTGTG...ACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp CCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGCACAGGGCCACCAGCTaGGGATGGTGGACACCGTGT +
Preference number: 4 (lower is better)
Translates to: PISCPGEVGEKARPCACLHRATS*GWWTPC
Trigger: ACACGGTGTCCACCATCCCCAGCTGGTGGCCCTGTG...CAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp ACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTCTGGGTACGCACCTTTaGGAGGAGGCAGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TACPISCPGEVGEKARPCLGTHL*EEAEEG
Trigger: TCCCTCCTCTGCCTCCTCTCAAAGGTGCGTACCCAG...ACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp TGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCTGGGAGGCGGACCTGTaGGTCTTTATGTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: CLSHLLPRGSRRESSPVCWEADL*VFMFRQ
Trigger: CTGCCGGAACATAAAGACTCACAGGTCCGCCTCCCA...GCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372865.4
CDS-3UTR GCA 90 bp CCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGGGTGGGTCTTCGGTGTaGCTCTCATGTCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PISCPGEVGEKARPCACLGGSSV*LSCPLQ
Trigger: CTGCAGGGGACATGAGAGGCACACCGAAGACCCACC...CAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp ATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCACACCCGGGTGGCCATaGCCAGCCCACAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: ISVCLLFILPPEKWPVQPTPGWP*PAHRWS
Trigger: CGACCACCTGTGGGCTGGGCATGGCCACCCGGGTGT...GGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp AGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCACACCCGGGTGGCCATaGCCAGCCCACAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: SELEERGLGLAPLPYLGITPGWP*PAHRWS
Trigger: CGACCACCTGTGGGCTGGGCATGGCCACCCGGGTGT...GATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp AGGACCCTGGACACCTTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACACTGTTTTGTGGACTaGGACCCCTGGAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RTLDTLASLLGSELEERGHCFVD*DPWRVG
Trigger: GCCCACCCTCCAGGGGTCGCAGTCCACAAAACAGTG...TCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAAGGTGTCCAGGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp TGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCCCCAAGCTAAAGTGTTaGCTGCAGCCAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CLSHLLPRGSRRESSPVCPKLKC*LQPRAW
Trigger: CCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGG...GCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp AGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGCTTGTCCCATCTCTTaGCCAGGGGAAGTCGGAGAG +
Preference number: 4 (lower is better)
Translates to: RDCLSHLLPRGSRRESSPACPIS*PGEVGE
Trigger: CTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGC...GGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp TGTTCTGCATGGTGGACCCAAGCTAAAGTGTTGCCTGCAGCCAAGGGCCTGGGCGGTGTCGGGCACAGCTaGGTACGCACCTTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: CSAWWTQAKVLPAAKGLGGVGHS*VRTFER
Trigger: CCTCTCAAAGGTGCGTACCCAGCTGTGCCCGACACC...GCCCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGTCCACCATGCAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp TGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGCGGGCATCGGGGAGGTaGCCAGGGGCAGGTACATGG +
Preference number: 4 (lower is better)
Translates to: CCSLNIKGLLVPSLAQGKRASGR*PGAGTW
Trigger: CCATGTACCTGCCCCTGGCCACCTCCCCGATGCCCG...CTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp TTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTCGCAGACGTGGAGTTaGTCGCAGGGCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LPRGSRRESSPVCMFDIGSQTWS*SQGSPS
Trigger: GCTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGA...GCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp ACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTATGCTGCAGTGGGGCTaGAAGGTCTCCCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: TACPISCPGEVGEKARPCMLQWG*KVSPSR
Trigger: TCGGGAAGGGGAGACCTTCCAGCCCCACTGCAGCAT...ACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp GGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTGGGGGCAGTCCCAGCTaGGCAGCCGCACATCCTCGC +
Preference number: 4 (lower is better)
Translates to: GSRRESSPVCMFDIGCVCGGSPS*AAAHPR
Trigger: GCGAGGATGTGCGGCTGCCCAGCTGGGACTGCCCCC...ACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp TGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGCCCAGTCCCCCTCCTTaGCCGCACACCCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: CCSLNIKGLLVPSLAQGKPSPPP*PHTHSG
Trigger: CCCTGAGTGGGTGTGCGGCCAAGGAGGGGGACTGGG...CTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp TTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCGGCAGAAGCGGTTCTaGTTGGACACCCGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LASLLGSELEERGLGLAPRQKRF*LDTRVA
Trigger: GGCCACCCGGGTGTCCAACCAGAACCGCTTCTGCCG...AGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCACACAGGGCCACCAGCTaGGGATGGTGGACACCGTGT +
Preference number: 4 (lower is better)
Translates to: GKGTRSCTSAIPRDPDRPHRATS*GWWTPC
Trigger: ACACGGTGTCCACCATCCCCAGCTGGTGGCCCTGTG...TGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp GAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCAGCTGGGTACGCACCTTTaGGAGGAGGCAGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ERGLGLAPLPYLGIQTDQLGTHL*EEAEEG
Trigger: TCCCTCCTCTGCCTCCTCTCAAAGGTGCGTACCCAG...CTGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp CCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGAGCACCAAGAGCCTGTaGCAGCTTGCAGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PISCPGEVGEKARPCACLSTKSL*QLAEAS
Trigger: AGAGGCCTCTGCAAGCTGTCACAGGCTCTTGGTGCT...CAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp AGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGCTGCAGAGCCAGCTTTaGGCCTGGGAGGCGGACCTG +
Preference number: 4 (lower is better)
Translates to: SLNIKGLLVPSLAQGKSELQSQL*AWEADL
Trigger: CAGGTCCGCCTCCCAGGCTCAAAGCTGGCTCTGCAG...CTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372865.4
CDS-3UTR GCA 90 bp TGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCCGTTCACCTCACAGCTaGTGTCGTCCTCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: CLSHLLPRGSRRESSPVCRSPHS*CRPLPR
Trigger: TCTTGGCAGAGGACGACAGCAGCTGTGAGGTGAACG...GCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR GCA 90 bp TTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTAGCGGCAGCGGATGCTaGAGTGGGGCTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LASLLGSELEERGLGLAPSGSGC*SGAGRS
Trigger: AGACCTTCCAGCCCCACTGCAGCATCCGCTGCCGCT...AGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR GCA 90 bp TGCCATACCTCGGGATCCAGACAGACCAGGCAGCGTGTTAATATTGGTGTTCTGCGCAGCGGCAGCGGATaGTGCAGTGGGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CHTSGSRQTRQRVNIGVLRSGSG*CSGAGR
Trigger: CCTTCCAGCCCCACTGCAGCATCCGCTGCCGCTGCG...CAGAACACCAATATTAACACGCTGCCTGGTCTGTCTGGATCCCGAGGTATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR GCA 90 bp AGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGAACCCCAGCGGGGCTaGAGATACCAGAAGCATTCA +
Preference number: 4 (lower is better)
Translates to: RDCLSHLLPRGSRRESSPEPQRG*RYQKHS
Trigger: TGAATGCTTCTGGTATCTGCAGCCCCGCTGGGGTTC...GGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGGAGCCTGTGACAGCTTaGAGAGGCCTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GSELEERGLGLAPLPYLGEPVTA*RGLSSS
Trigger: GGAGCTGGAGAGGCCTCTGCAAGCTGTCACAGGCTC...CCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp AAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCGAAAGCCTGAGCCAGTaGCAGCACCAAGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KGLLVPSLAQGKSERKLAESLSQ*QHQEPV
Trigger: CACAGGCTCTTGGTGCTGGCACTGGCTCAGGCTTTC...GGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTTGGCAGACCAGGCCCTaGCTGGCGTCGCAGACGTGG +
Preference number: 4 (lower is better)
Translates to: GSRRESSPVCMFDIGCVCWQTRP*LASQTW
Trigger: CCACGTCTGCGACGCCAGCCAGGGCCTGGTCTGCCA...ACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp ATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCAGGCACAGGCGGCGCTaGGTCTCCAGTCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ISVCLLFILPPEKWPVQPRHRRR*VSSRQK
Trigger: CTTCTGCCGACTGGAGACCCAGCGCCGCCTGTGCCT...GGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCAGGCACAGGCGGCGCTaGGTCTCCAGTCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SELEERGLGLAPLPYLGIRHRRR*VSSRQK
Trigger: CTTCTGCCGACTGGAGACCCAGCGCCGCCTGTGCCT...GATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp ACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTCTACCCCCAGAAAAATaGCCAGTCCAGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: TACPISCPGEVGEKARPCLPPEK*PVQPST
Trigger: GGTGCTGGGCTGGACTGGCCATTTTTCTGGGGGTAG...ACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp AAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCAGCCTCCTAGGCAGTaGGTTAGAGGAAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: KGLLVPSLAQGKSERKLAQPPRQ*VRGKGT
Trigger: AGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTG...GGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp ACCCTGGACACCTTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGTGTGTGTGAAAGCCTaGGCCAGTGCCAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: TLDTLASLLGSELEERGLVCVKA*ASASTK
Trigger: CTTGGTGCTGGCACTGGCTCAGGCTTTCACACACAC...TAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAAGGTGTCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp ACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTCGTTCACCTCACAGCTaGTGTCGTCCTCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TACPISCPGEVGEKARPCRSPHS*CRPLPR
Trigger: TCTTGGCAGAGGACGACAGCAGCTGTGAGGTGAACG...ACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR GCA 90 bp GAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCAGGGTCCCCAGGCCGTaGTCCATTCTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ESLCAFSSSYPQKNGQSSRVPRP*SILGRG
Trigger: TCCCCTGCCCAGAATGGAGCACGGCCTGGGGACCCT...GCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp TTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCACTGTTTTGTGGACTaGGACCCCTGGAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LRDCLSHLLPRGSRRESSHCFVD*DPWRVG
Trigger: GCCCACCCTCCAGGGGTCGCAGTCCACAAAACAGTG...CGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp AGGACCCTGGACACCTTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGAAAGGGGACTAGGTCTTaGACCTCTGCCATACCTCGG +
Preference number: 4 (lower is better)
Translates to: RTLDTLASLLGSELEERGKGTRS*TSAIPR
Trigger: CCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTT...TCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAAGGTGTCCAGGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCAGGAAAGCCTGAGCCAGTaGCAGCACCAAGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ERGLGLAPLPYLGIQTDQESLSQ*QHQEPV
Trigger: CACAGGCTCTTGGTGCTGGCACTGGCTCAGGCTTTC...CTGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp TCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAACGGGCATCGGGGAGGTaGCCAGGGGCAGGTACATGG +
Preference number: 4 (lower is better)
Translates to: SILRDCLSHLLPRGSRRERASGR*PGAGTW
Trigger: CCATGTACCTGCCCCTGGCCACCTCCCCGATGCCCG...TTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTTCGCAGACGTGGAGTTaGTCGCAGGGCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GSRRESSPVCMFDIGCVCSQTWS*SQGSPS
Trigger: GCTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGA...ACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCTGGCGTCGCAGACGTaGAGTTGGTCGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NLCVPSLHPTPRKMASPALASQT*SWSQGS
Trigger: GGAGCCCTGCGACCAACTCCACGTCTGCGACGCCAG...GGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCGGCAGAAGCGGTTCTaGTTGGACACCCGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRRESSPVCMFDIGCVCRRQKRF*LDTRVA
Trigger: GGCCACCCGGGTGTCCAACCAGAACCGCTTCTGCCG...CCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp ACCCTGGACACCTTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGAAGGCACTGTTTTGTaGACTGCGACCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TLDTLASLLGSELEERGLEGTVL*TATPGG
Trigger: CCCTCCAGGGGTCGCAGTCCACAAAACAGTGCCTTC...TAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAAGGTGTCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp TTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCAGCCAAGGGCCTaGGCACGGACCATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LASLLGSELEERGLGLAPLQPRA*ARTIFH
Trigger: ATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAG...AGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp TTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCTGCAGCCAAGGGCCTaGGCACGGACCATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LRDCLSHLLPRGSRRESSLQPRA*ARTIFH
Trigger: ATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAG...CGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp GAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCAGCAGCCTCCTAGGCAGTaGGTTAGAGGAAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: ERGLGLAPLPYLGIQTDQQPPRQ*VRGKGT
Trigger: AGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTG...CTGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp GCACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGTGTGTGTGAAAGCCTaGGCCAGTGCCAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: APAAASILRDCLSHLLPRVCVKA*ASASTK
Trigger: CTTGGTGCTGGCACTGGCTCAGGCTTTCACACACAC...CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GCACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGCTTGTCCCATCTCTTaGCCAGGGGAAGTCGGAGAG +
Preference number: 4 (lower is better)
Translates to: APAAASILRDCLSHLLPRACPIS*PGEVGE
Trigger: CTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGC...CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp ACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTCAGCCCAGCACCTGCTaGAGCCTCAATATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: TACPISCPGEVGEKARPCQPSTC*SLNIKG
Trigger: TCCCTTAATATTGAGGCTGCAGCAGGTGCTGGGCTG...ACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp AGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGGAGCCTGTGACAGCTTaGAGAGGCCTCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RGSRRESSPVCMFDIGCVEPVTA*RGLSSS
Trigger: GGAGCTGGAGAGGCCTCTGCAAGCTGTCACAGGCTC...CACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp CGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCAGGGTGTCGGGCACAGCTaGGTACGCACCTTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RRESSPVCMFDIGCVCRQGVGHS*VRTFER
Trigger: CCTCTCAAAGGTGCGTACCCAGCTGTGCCCGACACC...CTGCCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AGATCCAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCATGGCAGACCAGGCCCTaGCTGGCGTCGCAGACGTGG +
Preference number: 4 (lower is better)
Translates to: RSRISVCLLFILPPEKWPWQTRP*LASQTW
Trigger: CCACGTCTGCGACGCCAGCCAGGGCCTGGTCTGCCA...TGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCAGCGGATGCTGCAGTaGGGCTGGAAGGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: NLCVPSLHPTPRKMASPAQRMLQ*GWKVSP
Trigger: AGGGGAGACCTTCCAGCCCCACTGCAGCATCCGCTG...GGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp AGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAGCGGTTCTGGTTaGACACCCGGGTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: SLNIKGLLVPSLAQGKSERSGSG*TPGWPC
Trigger: GCATGGCCACCCGGGTGTCCAACCAGAACCGCTTCT...CTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp CGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCAGAGAAGCGGTTCTGGTTaGACACCCGGGTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: RRESSPVCMFDIGCVCRQRSGSG*TPGWPC
Trigger: GCATGGCCACCCGGGTGTCCAACCAGAACCGCTTCT...CTGCCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp CATGGTGGACCCAAGCTAAAGTGTTGCCTGCAGCCAAGGGCCTGGGCACGGACCTGGTGTTCTGCATGGTaGACCCAAGCTAAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: HGGPKLKCCLQPRAWARTWCSAW*TQAKVL
Trigger: CAACACTTTAGCTTGGGTCCACCATGCAGAACACCA...GGTCCGTGCCCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGTCCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp GGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTTGGGCTAGAGGACCCTaGACACCTTGGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GSRRESSPVCMFDIGCVCWARGP*TPWPAS
Trigger: GGAGGCTGGCCAAGGTGTCCAGGGTCCTCTAGCCCA...ACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp TTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTAGGCAGGGAGTaGGCTAGAGGACCCTGGACA +
Preference number: 4 (lower is better)
Translates to: LPRGSRRESSPVCMFDIGCVGRE*ARGPWT
Trigger: TGTCCAGGGTCCTCTAGCCCACTCCCTGCCTACACA...GCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp AGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGGCGCGTGTGTGTGTGTaGAAGCCTGAGCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SRRESSPVCMFDIGCVCRARVCV*KPEPVP
Trigger: TGGCACTGGCTCAGGCTTTCACACACACACACGCGC...CCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp TGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGCTGAAGGTGAAACTGTaGAGGCCACCAAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: CCSLNIKGLLVPSLAQGKLKVKL*RPPRGC
Trigger: GCACCCCCTTGGTGGCCTTCACAGTTTCACCTTCAG...CTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp AGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCTGAAGGTGAAACTGTaGAGGCCACCAAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SELEERGLGLAPLPYLGILKVKL*RPPRGC
Trigger: GCACCCCCTTGGTGGCCTTCACAGTTTCACCTTCAG...GATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp TGCCATACCTCGGGATCCAGACAGACCAGGCAGCGTGTTAATATTGGTGTTCTGGGTGGGTCTTCGGTGTaGCTCTCATGTCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CHTSGSRQTRQRVNIGVLGGSSV*LSCPLQ
Trigger: CTGCAGGGGACATGAGAGGCACACCGAAGACCCACC...CAGAACACCAATATTAACACGCTGCCTGGTCTGTCTGGATCCCGAGGTATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR GCA 90 bp AGATCCAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAAGGGTCCCCAGGCCGTaGTCCATTCTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSRISVCLLFILPPEKWPRVPRP*SILGRG
Trigger: TCCCCTGCCCAGAATGGAGCACGGCCTGGGGACCCT...TGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp ATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCGCTTGTCCCATCTCTTaGCCAGGGGAAGTCGGAGAG +
Preference number: 4 (lower is better)
Translates to: ISVCLLFILPPEKWPVQPACPIS*PGEVGE
Trigger: CTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGC...GGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGGTCCAGCCCAGCACCTaGTGCAGCCTCAATATTAAG +
Preference number: 4 (lower is better)
Translates to: GSELEERGLGLAPLPYLGVQPST*CSLNIK
Trigger: CTTAATATTGAGGCTGCAGCAGGTGCTGGGCTGGAC...CCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GATCCAGACAGACCAGGCAGCGTGTTAATATTGGTGTTCTGCATGGTGGACCCAATGCTGCAGTGGGGCTaGAAGGTCTCCCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: DPDRPGSVLILVFCMVDPMLQWG*KVSPSR
Trigger: TCGGGAAGGGGAGACCTTCCAGCCCCACTGCAGCAT...TGGGTCCACCATGCAGAACACCAATATTAACACGCTGCCTGGTCTGTCTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp CGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCAGGAAGGCACTGTTTTGTaGACTGCGACCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RRESSPVCMFDIGCVCRQEGTVL*TATPGG
Trigger: CCCTCCAGGGGTCGCAGTCCACAAAACAGTGCCTTC...CTGCCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTACCAGCTGGGGATGGTaGACACCGTGTCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: GSRRESSPVCMFDIGCVCTSWGW*TPCPHS
Trigger: GGAATGGGGACACGGTGTCCACCATCCCCAGCTGGT...ACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp ATACCTCGGGATCCAGACAGACCAGGCAGCGTGTTAATATTGGTGTTCTGCATGTGGGCTAGAGGACCCTaGACACCTTGGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: IPRDPDRPGSVLILVFCMWARGP*TPWPAS
Trigger: GGAGGCTGGCCAAGGTGTCCAGGGTCCTCTAGCCCA...CATGCAGAACACCAATATTAACACGCTGCCTGGTCTGTCTGGATCCCGAGGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp ATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCTGTGTAGGCAGGGAGTaGGCTAGAGGACCCTGGACA +
Preference number: 4 (lower is better)
Translates to: ISVCLLFILPPEKWPVQPCVGRE*ARGPWT
Trigger: TGTCCAGGGTCCTCTAGCCCACTCCCTGCCTACACA...GGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
3UTR CAA 72 bp TATTGGTGTTCTGCATGGTGGACCCAAGCTAAAGTGTaGCCTGCAGCCAAGGGCCTGGGCACGGACCATCTT +
Preference number: 4 (lower is better)
Translates to: YWCSAWWTQAKV*PAAKGLGTDHL
Trigger: AAGATGGTCCGTGCCCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGTCCACCATGCAGAACACCAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
3UTR CAA 72 bp CCAGCACCTGCTGCAGCCTCAATATTAAGGGACTGCTaGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PAPAAASILRDC*SHLLPRGSRRE
Trigger: TTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp ATCCAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTACTCAGGGCAGCACTTaGCCAGGACCTCGACCCTCC +
Preference number: 4 (lower is better)
Translates to: IQNLCVPSLHPTPRKMASTQGST*PGPRPS
Trigger: GGAGGGTCGAGGTCCTGGGCAAGTGCTGCCCTGAGT...ACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR GCA 90 bp AGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCCCAAGCTAAAGTGTTaGCTGCAGCCAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRRESSPVCMFDIGCVCRPKLKC*LQPRAW
Trigger: CCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGG...CCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp CGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCAGAAGGGGACTAGGTCTTaGACCTCTGCCATACCTCGG +
Preference number: 4 (lower is better)
Translates to: RRESSPVCMFDIGCVCRQKGTRS*TSAIPR
Trigger: CCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTT...CTGCCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GCACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGCAGCCCAGCACCTGCTaGAGCCTCAATATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: APAAASILRDCLSHLLPRQPSTC*SLNIKG
Trigger: TCCCTTAATATTGAGGCTGCAGCAGGTGCTGGGCTG...CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACCAGCCCAGCACCTGCTaGAGCCTCAATATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: VRGKGTRSCTSAIPRDPDQPSTC*SLNIKG
Trigger: TCCCTTAATATTGAGGCTGCAGCAGGTGCTGGGCTG...GTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp ACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGGTCCAGCCCAGCACCTaGTGCAGCCTCAATATTAAG +
Preference number: 4 (lower is better)
Translates to: TCCSLNIKGLLVPSLAQGVQPST*CSLNIK
Trigger: CTTAATATTGAGGCTGCAGCAGGTGCTGGGCTGGAC...CCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp AGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCGAACCCCAGCGGGGCTaGAGATACCAGAAGCATTCA +
Preference number: 4 (lower is better)
Translates to: SELEERGLGLAPLPYLGIEPQRG*RYQKHS
Trigger: TGAATGCTTCTGGTATCTGCAGCCCCGCTGGGGTTC...GATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AGATCCAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCACAGCGGATGCTGCAGTaGGGCTGGAAGGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RSRISVCLLFILPPEKWPQRMLQ*GWKVSP
Trigger: AGGGGAGACCTTCCAGCCCCACTGCAGCATCCGCTG...TGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp AGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGACAAGGCCAGAAAACTaGGGTCCTTGGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLNIKGLLVPSLAQGKSETRPEN*GPWAGR
Trigger: CCTTCCAGCCCAAGGACCCCAGTTTTCTGGCCTTGT...CTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp TCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGAAGCGGTTCTGGTTaGACACCCGGGTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: SILRDCLSHLLPRGSRRERSGSG*TPGWPC
Trigger: GCATGGCCACCCGGGTGTCCAACCAGAACCGCTTCT...TTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTTGTGTAGGCAGGGAGTaGGCTAGAGGACCCTGGACA +
Preference number: 4 (lower is better)
Translates to: GSRRESSPVCMFDIGCVCCVGRE*ARGPWT
Trigger: TGTCCAGGGTCCTCTAGCCCACTCCCTGCCTACACA...ACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCTACCCCCAGAAAAATaGCCAGTCCAGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: ESLCAFSSSYPQKNGQSSLPPEK*PVQPST
Trigger: GGTGCTGGGCTGGACTGGCCATTTTTCTGGGGGTAG...GCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCTACCCCCAGAAAAATaGCCAGTCCAGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SRRESSPVCMFDIGCVCRLPPEK*PVQPST
Trigger: GGTGCTGGGCTGGACTGGCCATTTTTCTGGGGGTAG...CCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp TGCCATACCTCGGGATCCAGACAGACCAGGCAGCGTGTTAATATTGGTGTTCTGCAGCCTCCTAGGCAGTaGGTTAGAGGAAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: CHTSGSRQTRQRVNIGVLQPPRQ*VRGKGT
Trigger: AGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTG...CAGAACACCAATATTAACACGCTGCCTGGTCTGTCTGGATCCCGAGGTATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR TCA 90 bp AATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGAGCACCAAGAGCCTGTaGCAGCTTGCAGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NIKGLLVPSLAQGKSERKSTKSL*QLAEAS
Trigger: AGAGGCCTCTGCAAGCTGTCACAGGCTCTTGGTGCT...CTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp AGATCCAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGCGCGTGTGTGTGTGTaGAAGCCTGAGCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RSRISVCLLFILPPEKWPARVCV*KPEPVP
Trigger: TGGCACTGGCTCAGGCTTTCACACACACACACGCGC...TGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp AATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCCCAAGCTAAAGTGTTaGCTGCAGCCAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NIKGLLVPSLAQGKSERKPKLKC*LQPRAW
Trigger: CCAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGG...CTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp ATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCGTCCAGCCCAGCACCTaGTGCAGCCTCAATATTAAG +
Preference number: 4 (lower is better)
Translates to: ISVCLLFILPPEKWPVQPVQPST*CSLNIK
Trigger: CTTAATATTGAGGCTGCAGCAGGTGCTGGGCTGGAC...GGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AGATCCAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGGTGTCGGGCACAGCTaGGTACGCACCTTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RSRISVCLLFILPPEKWPGVGHS*VRTFER
Trigger: CCTCTCAAAGGTGCGTACCCAGCTGTGCCCGACACC...TGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR TCA 90 bp TTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTTCATGGCTCAAAGGATaGGCCCATTTACCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LASLLGSELEERGLGLAPSWLKG*AHLPEG
Trigger: ACCTTCAGGTAAATGGGCTCATCCTTTGAGCCATGA...AGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372865.4
CDS-3UTR GCA 90 bp TTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTGAAAGCTCGCCCGTGTaGATGTTTGATATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LASLLGSELEERGLGLAPESSPV*MFDIGC
Trigger: ACAGCCTATATCAAACATGCACACGGGCGAGCTTTC...AGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GCACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGAAAGCTCGCCCGTGTaGATGTTTGATATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: APAAASILRDCLSHLLPRESSPV*MFDIGC
Trigger: ACAGCCTATATCAAACATGCACACGGGCGAGCTTTC...CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGACAAGGCCAGAAAACTaGGGTCCTTGGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NIKGLLVPSLAQGKSERKTRPEN*GPWAGR
Trigger: CCTTCCAGCCCAAGGACCCCAGTTTTCTGGCCTTGT...CTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CCA 90 bp AGATCCAGAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGAAGGCACTGTTTTGTaGACTGCGACCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RSRISVCLLFILPPEKWPEGTVL*TATPGG
Trigger: CCCTCCAGGGGTCGCAGTCCACAAAACAGTGCCTTC...TGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp AGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGACAAGGCCAGAAAACTaGGGTCCTGCTTACAGAGGC +
Preference number: 4 (lower is better)
Translates to: SRRESSPVCMFDIGCVCRTRPEN*GPAYRG
Trigger: GCCTCTGTAAGCAGGACCCCAGTTTTCTGGCCTTGT...CCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372865.4
CDS-3UTR GCA 90 bp AGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCGAAAGCTCGCCCGTGTaGATGTTTGATATAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SELEERGLGLAPLPYLGIESSPV*MFDIGC
Trigger: ACAGCCTATATCAAACATGCACACGGGCGAGCTTTC...GATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACTCAATATTAAGGGACTaGTTGTCCCATCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VRGKGTRSCTSAIPRDPDSILRD*LSHLLP
Trigger: GGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGA...GTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp TTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGTCAATATTAAGGGACTaGTTGTCCCATCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LRDCLSHLLPRGSRRESSSILRD*LSHLLP
Trigger: GGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGA...CGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp AGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCTCCAGAATCTCTGTGTaGCTTCTCTTCATCCTACCC +
Preference number: 4 (lower is better)
Translates to: SELEERGLGLAPLPYLGISRISV*LLFILP
Trigger: GGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGA...GATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp ATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCTCCAGAATCTCTGTGTaGCTTCTCTTCATCCTACCC +
Preference number: 4 (lower is better)
Translates to: ISVCLLFILPPEKWPVQPSRISV*LLFILP
Trigger: GGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGA...GGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCAAGCTTTTTCATTCCTTaGTTCGCTTCCCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: GKGTRSCTSAIPRDPDRPSFFIP*FASHPH
Trigger: ATGAGGATGGGAAGCGAAGCAAGGAATGAAAAAGCT...TGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372865.4
CDS-3UTR CCA 90 bp ATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCCTGGTGTTCTGCATGGTaGACCCAAGCTAAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: ISVCLLFILPPEKWPVQPWCSAW*TQAKVL
Trigger: CAACACTTTAGCTTGGGTCCACCATGCAGAACACCA...GGGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp TTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGTATTGGTGTTCTGCATaGTGGACCCAAGCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: LRDCLSHLLPRGSRRESSYWCSA*WTQAKV
Trigger: CACTTTAGCTTGGGTCCACCATGCAGAACACCAATA...CGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTTCCAGAATCTCTGTGTaGCTTCTCTTCATCCTACCC +
Preference number: 4 (lower is better)
Translates to: GSRRESSPVCMFDIGCVCSRISV*LLFILP
Trigger: GGGTAGGATGAAGAGAAGGCACACAGAGATTCTGGA...ACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp GAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCAGTAAACAACCCCTTTaGAGAGCTGACCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: ESLCAFSSSYPQKNGQSSSKQPL*RADPRS
Trigger: AGACCTTGGGTCAGCTCTGCAAAGGGGTTGTTTACT...GCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCTGGTGTTCTGCATGGTaGACCCAAGCTAAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: ESLCAFSSSYPQKNGQSSWCSAW*TQAKVL
Trigger: CAACACTTTAGCTTGGGTCCACCATGCAGAACACCA...GCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp CGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCAGTATTGGTGTTCTGCATaGTGGACCCAAGCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: RRESSPVCMFDIGCVCRQYWCSA*WTQAKV
Trigger: CACTTTAGCTTGGGTCCACCATGCAGAACACCAATA...CTGCCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp AATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCCTCAATATTAAGGGACTaGTTGTCCCATCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: NLCVPSLHPTPRKMASPASILRD*LSHLLP
Trigger: GGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGA...GGCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR GCA 90 bp TCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGTAAACAACCCCTTTaGAGAGCTGACCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SILRDCLSHLLPRGSRRESKQPL*RADPRS
Trigger: AGACCTTGGGTCAGCTCTGCAAAGGGGTTGTTTACT...TTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CCA 90 bp GATCCAGACAGACCAGGCAGCGTGTTAATATTGGTGTTCTGCATGGTGGACCCATATTGGTGTTCTGCATaGTGGACCCAAGCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: DPDRPGSVLILVFCMVDPYWCSA*WTQAKV
Trigger: CACTTTAGCTTGGGTCCACCATGCAGAACACCAATA...TGGGTCCACCATGCAGAACACCAATATTAACACGCTGCCTGGTCTGTCTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS CCA 90 bp CCCGGCCACCGGGTCCTGCCCCGGGCTGGCAGACCAGGCCCTGGCTaGCGTCGCAGACGTGGAGTTGGTCGCAGGGCTCCCCCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: PGHRVLPRAGRPGPG*RRRRGVGRRAPPAA
Trigger: GGCGGCTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGACGCCAGCCAGGGCCTGGTCTGCCAGCCCGGGGCAGGACCCGGTGGCCGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000497421.1
CDS CCA 90 bp CCTGCCCCGGGCTGGCAGACCAGGCCCTGGCTGGCGTCGCAGACGTaGAGTTGGTCGCAGGGCTCCCCCAGCCGCCGTGCACATACCCGG +
Preference number: 5 (lower is better)
Translates to: PAPGWQTRPWLASQT*SWSQGSPSRRAHTR
Trigger: CCGGGTATGTGCACGGCGGCTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGACGCCAGCCAGGGCCTGGTCTGCCAGCCCGGGGCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000497421.1
CDS CCA 90 bp CCGGGCTGGCAGACCAGGCCCTGGCTGGCGTCGCAGACGTGGAGTTaGTCGCAGGGCTCCCCCAGCCGCCGTGCACATACCCGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PGWQTRPWLASQTWS*SQGSPSRRAHTRQQ
Trigger: CTGCTGCCGGGTATGTGCACGGCGGCTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGACGCCAGCCAGGGCCTGGTCTGCCAGCCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000497421.1
CDS GCA 90 bp GGCGTCGCAGACGTGGAGTTGGTCGCAGGGCTCCCCCAGCCGCCGTaGACATACCCGGCAGCAGCCACAGCCATCCAGCACCAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: GVADVELVAGLPQPP*TYPAAATAIQHQGY
Trigger: GTACCCCTGGTGCTGGATGGCTGTGGCTGCTGCCGGGTATGTGCACGGCGGCTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGACGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000497421.1
CDS GCA 90 bp TCTCCAGTCGGCAGAAGCGGTTCTGGTTGGACACCCGGGTGGCCATaGCCAGCCCACAGGTGGTCGAGCAGGGTCCCCAGGCCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: SPVGRSGSGWTPGWP*PAHRWSSRVPRPCS
Trigger: GGAGCACGGCCTGGGGACCCTGCTCGACCACCTGTGGGCTGGGCATGGCCACCCGGGTGTCCAACCAGAACCGCTTCTGCCGACTGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000471629.1
CDS CCA 90 bp ACGCAGGTGAAGCCGCCGTCCTCGCAGCGGCAGCGGATGCTGCAGTaGGGCTGGAAGGTCTCCCCTTCCCGATACAGGCGGCCGTTCACC +
Preference number: 5 (lower is better)
Translates to: TQVKPPSSQRQRMLQ*GWKVSPSRYRRPFT
Trigger: GGTGAACGGCCGCCTGTATCGGGAAGGGGAGACCTTCCAGCCCCACTGCAGCATCCGCTGCCGCTGCGAGGACGGCGGCTTCACCTGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000190983.5
ENST00000372868.6
ENST00000465000.1
ENST00000471629.1
CDS CCA 90 bp AGCGGTTCTGGTTGGACACCCGGGTGGCCATGCCCAGCCCACAGGTaGTCGAGCAGGGTCCCCAGGCCGTGCTCCATTCTGGGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SGSGWTPGWPCPAHR*SSRVPRPCSILGRG
Trigger: TCCCCTGCCCAGAATGGAGCACGGCCTGGGGACCCTGCTCGACCACCTGTGGGCTGGGCATGGCCACCCGGGTGTCCAACCAGAACCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000471629.1
CDS CCA 90 bp GAGCTGCCCAGATCCCGCTGCCTGAGGCAGCTGCCTCACAGTAGCTaGGCCCTGCCCAGGGCTCCAGCCCAGGATATGCACCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: ELPRSRCLRQLPHSS*ALPRAPAQDMHLSP
Trigger: TGGGGAGAGGTGCATATCCTGGGCTGGAGCCCTGGGCAGGGCCCAGCTACTGTGAGGCAGCTGCCTCAGGCAGCGGGATCTGGGCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS-3UTR CAA 90 bp CCTGCAGCCAAGGGCCTGGGCACGGACCATCTTCCATCAGCCCAGGGCCCAGGCAGAGCCTGTGACAGCTaGCAGAGGCCTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PAAKGLGTDHLPSAQGPGRACDS*QRPLQL
Trigger: GAGCTGGAGAGGCCTCTGCAAGCTGTCACAGGCTCT...GCCTGGGCCCTGGGCTGATGGAAGATGGTCCGTGCCCAGGCCCTTGGCTGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372868.6
CDS CCA 90 bp TCCTTGAGGGCTGGGGCGGCCAGTGTGCGTCTCTGCACCCTCCGGTaGGCTCAGAGCCTAGGTGCGACACACAGTACTGTAGGAATGCCC +
Preference number: 5 (lower is better)
Translates to: SLRAGAASVRLCTLR*AQSLGATHSTVGMP
Trigger: GGGCATTCCTACAGTACTGTGTGTCGCACCTAGGCTCTGAGCCCACCGGAGGGTGCAGAGACGCACACTGGCCGCCCCAGCCCTCAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS GCA 90 bp ATACAGGCGGCCGTTCACCTCACAGCTGCTGTCGTCCTCTGCCACTaGGGAGGAAAAACCGCACCCCCATCGGTGACCCGCAAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: IQAAVHLTAAVVLCH*GGKTAPPSVTRKAA
Trigger: TGCCGCTTTGCGGGTCACCGATGGGGGTGCGGTTTTTCCTCCGCAGTGGCAGAGGACGACAGCAGCTGTGAGGTGAACGGCCGCCTGTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS GCA 90 bp TTCCCGATACAGGCGGCCGTTCACCTCACAGCTGCTGTCGTCCTCTaGCACTGCGGAGGAAAAACCGCACCCCCATCGGTGACCCGCAAA +
Preference number: 5 (lower is better)
Translates to: FPIQAAVHLTAAVVL*HCGGKTAPPSVTRK
Trigger: TTTGCGGGTCACCGATGGGGGTGCGGTTTTTCCTCCGCAGTGGCAGAGGACGACAGCAGCTGTGAGGTGAACGGCCGCCTGTATCGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS-3UTR CAA 90 bp GCACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGCCCCAGTCCCCCTCCTaGGCCGCACACCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: APAAASILRDCLSHLLPRPQSPS*AAHPLR
Trigger: CCTGAGTGGGTGTGCGGCCAAGGAGGGGGACTGGGG...CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CAA 90 bp ACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTCCTGCAGAGCCAGCTTaGAGCCTGGGAGGCGGACCT +
Preference number: 5 (lower is better)
Translates to: TACPISCPGEVGEKARPCPAEPA*SLGGGP
Trigger: AGGTCCGCCTCCCAGGCTCAAAGCTGGCTCTGCAGG...ACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372865.4
CDS GCA 90 bp TGTGAAAGCCTGAGCCAGTGCCAGCACCAAGAGCCTGTGACAGCTTaGAGAGGCCTCTCCAGCTCCTTCCAGCCCAAGAGGGTCCTAGCC +
Preference number: 5 (lower is better)
Translates to: CESLSQCQHQEPVTA*RGLSSSFQPKRVLA
Trigger: GGCTAGGACCCTCTTGGGCTGGAAGGAGCTGGAGAGGCCTCTGCAAGCTGTCACAGGCTCTTGGTGCTGGCACTGGCTCAGGCTTTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372865.4
ENST00000372868.6
ENST00000497421.1
CDS-3UTR CAA 90 bp CGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCAGCCCCAGTCCCCCTCCTaGGCCGCACACCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: RRESSPVCMFDIGCVCRQPQSPS*AAHPLR
Trigger: CCTGAGTGGGTGTGCGGCCAAGGAGGGGGACTGGGG...CTGCCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CAA 90 bp ACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTCAGAAGCGGTTCTGGTaGGACACCCGGGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: TACPISCPGEVGEKARPCQKRFW*DTRVAM
Trigger: CATGGCCACCCGGGTGTCCAACCAGAACCGCTTCTG...ACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS GCA 90 bp GTGTGTGTGTGTGTGCGCGTGTGTGTGTGTGAAAGCCTGAGCCAGTaGCAGCACCAAGAGCCTGTGACAGCTTGCAGAGGCCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: VCVCVRVCVCESLSQ*QHQEPVTACRGLSS
Trigger: GCTGGAGAGGCCTCTGCAAGCTGTCACAGGCTCTTGGTGCTGGCACTGGCTCAGGCTTTCACACACACACACGCGCACACACACACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372865.4
ENST00000372868.6
ENST00000497421.1
CDS-3UTR CAA 90 bp GTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACGCTGGGTACGCACCTTaGAGAGGAGGCAGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: VRGKGTRSCTSAIPRDPDAGYAP*RGGRGG
Trigger: CCCTCCTCTGCCTCCTCTCAAAGGTGCGTACCCAGC...GTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CAA 90 bp GAATCTCTGTGTGCCTTCTCTTCATCCTACCCCCAGAAAAATGGCCAGTCCAGCGTCGCAGACGTGGAGTaGGTCGCAGGGCTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: ESLCAFSSSYPQKNGQSSVADVE*VAGLPQ
Trigger: CTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGAC...GCTGGACTGGCCATTTTTCTGGGGGTAGGATGAAGAGAAGGCACACAGAGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CAA 90 bp GGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTGTCGCAGACGTGGAGTaGGTCGCAGGGCTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: GSRRESSPVCMFDIGCVCVADVE*VAGLPQ
Trigger: CTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGAC...ACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CAA 90 bp CGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCAGCACTCAGGGCAGCACTaGCCCAGGACCTCGACCCTC +
Preference number: 5 (lower is better)
Translates to: RRESSPVCMFDIGCVCRQHSGQH*PRTSTL
Trigger: GAGGGTCGAGGTCCTGGGCAAGTGCTGCCCTGAGTG...CTGCCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CAA 90 bp AGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGCACTCAGGGCAGCACTaGCCCAGGACCTCGACCCTC +
Preference number: 5 (lower is better)
Translates to: SLNIKGLLVPSLAQGKSEHSGQH*PRTSTL
Trigger: GAGGGTCGAGGTCCTGGGCAAGTGCTGCCCTGAGTG...CTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CAA 90 bp TTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCCAGAAGCGGTTCTGGTaGGACACCCGGGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: LPRGSRRESSPVCMFDIGQKRFW*DTRVAM
Trigger: CATGGCCACCCGGGTGTCCAACCAGAACCGCTTCTG...GCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS TCA 90 bp AGGCCTAGAAGAGTGGTGAGGAATGTCACATGCTCGGGTGACTGCTaGATACATGGCAAACCCAGGATCCCAGCAGTGCTCCGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: RPRRVVRNVTCSGDC*IHGKPRIPAVLRGP
Trigger: GGGCCCTCGGAGCACTGCTGGGATCCTGGGTTTGCCATGTATTCAGCAGTCACCCGAGCATGTGACATTCCTCACCACTCTTCTAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS CCA 90 bp GTGCTCCCAGACAGAAAGAGGACAGTTCCTGCCTTGAGGGACTCATaGGCTTGGGAAAGGGGGACGGGTGTGAGGGCATCATCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: VLPDRKRTVPALRDS*AWERGTGVRASSPR
Trigger: TCTTGGAGATGATGCCCTCACACCCGTCCCCCTTTCCCAAGCCCATGAGTCCCTCAAGGCAGGAACTGTCCTCTTTCTGTCTGGGAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS-3UTR CAA 90 bp CGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCAGGCTGGGTACGCACCTTaGAGAGGAGGCAGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: RRESSPVCMFDIGCVCRQAGYAP*RGGRGG
Trigger: CCCTCCTCTGCCTCCTCTCAAAGGTGCGTACCCAGC...CTGCCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CAA 90 bp TGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGCAGAAGCGGTTCTGGTaGGACACCCGGGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: CCSLNIKGLLVPSLAQGKQKRFW*DTRVAM
Trigger: CATGGCCACCCGGGTGTCCAACCAGAACCGCTTCTG...CTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CAA 90 bp CCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGCTAGAAGGCACTGTTTaGTGGACTGCGACCCCTGGA +
Preference number: 5 (lower is better)
Translates to: PISCPGEVGEKARPCACLLEGTV*WTATPG
Trigger: TCCAGGGGTCGCAGTCCACAAAACAGTGCCTTCTAG...CAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CAA 90 bp GGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGACCCAAGCTAAAGTGTaGCCTGCAGCCAAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GSELEERGLGLAPLPYLGTQAKV*PAAKGL
Trigger: CAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGT...CCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CAA 90 bp GCACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGAGAGCCTGTGACAGCTaGCAGAGGCCTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: APAAASILRDCLSHLLPRRACDS*QRPLQL
Trigger: GAGCTGGAGAGGCCTCTGCAAGCTGTCACAGGCTCT...CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000372868.6
CDS GCA 90 bp CCAGCGGGGCTGCAGATACCAGAAGCATTCAGTAAACAACCCCTTTaGAGAGCTGACCCAAGGTCTCCTAAGCTCCGTGGCCCTGACTCT +
Preference number: 5 (lower is better)
Translates to: PAGLQIPEAFSKQPL*RADPRSPKLRGPDS
Trigger: AGAGTCAGGGCCACGGAGCTTAGGAGACCTTGGGTCAGCTCTGCAAAGGGGTTGTTTACTGAATGCTTCTGGTATCTGCAGCCCCGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372868.6
CDS CCA 90 bp CAGGACAGCCCTCCCACAACAACTAATTCTCTGGCACCCAGTCACTaGAGCCAGCTTGCAAAGCCCTGCCCCGAAGCATCAGAGAATACC +
Preference number: 5 (lower is better)
Translates to: QDSPPTTTNSLAPSH*SQLAKPCPEASENT
Trigger: GGTATTCTCTGATGCTTCGGGGCAGGGCTTTGCAAGCTGGCTCCAGTGACTGGGTGCCAGAGAATTAGTTGTTGTGGGAGGGCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS-3UTR CAA 90 bp GGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCACTAGAAGGCACTGTTTaGTGGACTGCGACCCCTGGA +
Preference number: 5 (lower is better)
Translates to: GKGTRSCTSAIPRDPDRPLEGTV*WTATPG
Trigger: TCCAGGGGTCGCAGTCCACAAAACAGTGCCTTCTAG...TGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CAA 90 bp AGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCTCGCCCATATTAAGGGACTGCTaGTCCCATCTCTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RDCLSHLLPRGSRRESSPILRDC*SHLLPR
Trigger: CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATAT...GGGCGAGCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS CCA 90 bp CCAGACAGAAAGAGGACAGTTCCTGCCTTGAGGGACTCATGGGCTTaGGAAAGGGGGACGGGTGTGAGGGCATCATCTCCAAGACAGAAT +
Preference number: 5 (lower is better)
Translates to: PDRKRTVPALRDSWA*ERGTGVRASSPRQN
Trigger: ATTCTGTCTTGGAGATGATGCCCTCACACCCGTCCCCCTTTCCCAAGCCCATGAGTCCCTCAAGGCAGGAACTGTCCTCTTTCTGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS-3UTR CAA 90 bp ATACCTCGGGATCCAGACAGACCAGGCAGCGTGTTAATATTGGTGTTCTGCATGGCTGGGTACGCACCTTaGAGAGGAGGCAGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: IPRDPDRPGSVLILVFCMAGYAP*RGGRGG
Trigger: CCCTCCTCTGCCTCCTCTCAAAGGTGCGTACCCAGC...CATGCAGAACACCAATATTAACACGCTGCCTGGTCTGTCTGGATCCCGAGGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CAA 90 bp GCACCTGCTGCAGCCTCAATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGCTAGAAGGCACTGTTTaGTGGACTGCGACCCCTGGA +
Preference number: 5 (lower is better)
Translates to: APAAASILRDCLSHLLPRLEGTV*WTATPG
Trigger: TCCAGGGGTCGCAGTCCACAAAACAGTGCCTTCTAG...CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATATTGAGGCTGCAGCAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS TCA 90 bp CCTCATGGCTCAAAGGATGAGCCCATTTACCTGAAGGTGAAACTGTaGAGGCCACCAAGGGGGTGCCTGTCCGTGTGTGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: PHGSKDEPIYLKVKL*RPPRGCLSVCVCVC
Trigger: ACACACACACACACACACGGACAGGCACCCCCTTGGTGGCCTTCACAGTTTCACCTTCAGGTAAATGGGCTCATCCTTTGAGCCATGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000497421.1
CDS CCA 90 bp CTCCCCAGTCCCTGGGAGGCAGCCTTCATTCTCCCTGCTCTTCTCTaGTCAAAAACGCTGGGAAGCACTGGTCTGTATAAAGTGCTAGTG +
Preference number: 5 (lower is better)
Translates to: LPSPWEAAFILPALL*SKTLGSTGLYKVLV
Trigger: CACTAGCACTTTATACAGACCAGTGCTTCCCAGCGTTTTTGACCAGAGAAGAGCAGGGAGAATGAAGGCTGCCTCCCAGGGACTGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS-3UTR CAA 90 bp GATCCAGACAGACCAGGCAGCGTGTTAATATTGGTGTTCTGCATGGTGGACCCAACCCAAGCTAAAGTGTaGCCTGCAGCCAAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: DPDRPGSVLILVFCMVDPTQAKV*PAAKGL
Trigger: CAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGT...TGGGTCCACCATGCAGAACACCAATATTAACACGCTGCCTGGTCTGTCTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190983.5
ENST00000372868.6
CDS-3UTR CAA 90 bp ATATTAAGGGACTGCTTGTCCCATCTCTTGCCCAGGGGAAGTCGGAGAGAAAGCACCCAAGCTAAAGTGTaGCCTGCAGCCAAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: ILRDCLSHLLPRGSRRESTQAKV*PAAKGL
Trigger: CAGGCCCTTGGCTGCAGGCAACACTTTAGCTTGGGT...GCTTTCTCTCCGACTTCCCCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CAA 90 bp GGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGACCAGGCAGCGTGTTAATATaGGTGTTCTGCATGGTGGAC +
Preference number: 5 (lower is better)
Translates to: GKGTRSCTSAIPRDPDRPGSVLI*VFCMVD
Trigger: GTCCACCATGCAGAACACCAATATTAACACGCTGCC...TGGTCTGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS-3UTR CAA 90 bp CGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTAGGCAGCCTGCAGAGCCAGCTTaGAGCCTGAAGGTGAAACTG +
Preference number: 5 (lower is better)
Translates to: RRESSPVCMFDIGCVCRQPAEPA*SLKVKL
Trigger: CAGTTTCACCTTCAGGCTCAAAGCTGGCTCTGCAGG...CTGCCTACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372868.6
CDS TCA 90 bp GCTTTGGGACACCAAGTTCAGCTGGAATGGATGGGATACCTGAAGTaGGCACCCAAGGAGGTAGAGAGAGGAGGGCTGCACTTTGATCCA +
Preference number: 5 (lower is better)
Translates to: ALGHQVQLEWMGYLK*APKEVERGGLHFDP
Trigger: TGGATCAAAGTGCAGCCCTCCTCTCTCTACCTCCTTGGGTGCTCACTTCAGGTATCCCATCCATTCCAGCTGAACTTGGTGTCCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS TCA 90 bp GCCCTGCCCCGAAGCATCAGAGAATACCAAGGCCTAGAAGAGTGGTaGGGAATGTCACATGCTCGGGTGACTGCTGAATACATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: ALPRSIREYQGLEEW*GMSHARVTAEYMAN
Trigger: GTTTGCCATGTATTCAGCAGTCACCCGAGCATGTGACATTCCTCACCACTCTTCTAGGCCTTGGTATTCTCTGATGCTTCGGGGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS-3UTR CAA 90 bp TTGGCCAGCCTCCTAGGCAGTGAGTTAGAGGAAAGGGGACTAGGTCTTGCACCTGGCAGCGTGTTAATATaGGTGTTCTGCATGGTGGAC +
Preference number: 5 (lower is better)
Translates to: LASLLGSELEERGLGLAPGSVLI*VFCMVD
Trigger: GTCCACCATGCAGAACACCAATATTAACACGCTGCC...AGGTGCAAGACCTAGTCCCCTTTCCTCTAACTCACTGCCTAGGAGGCTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS GCA 90 bp GAGACTTCGAACAATTTCACCCTTGGGTTAGTTGATTTCAGGCTATaGTCCCCAGTCCCTGGGAGGCAGCCTTCATTCTCCCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: ETSNNFTLGLVDFRL*SPVPGRQPSFSLLF
Trigger: GAAGAGCAGGGAGAATGAAGGCTGCCTCCCAGGGACTGGGGAGCATAGCCTGAAATCAACTAACCCAAGGGTGAAATTGTTCGAAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS-3UTR CAA 90 bp TTAGAGGAAAGGGGACTAGGTCTTGCACCTCTGCCATACCTCGGGATCCAGACAGGCAGCGTGTTAATATaGGTGTTCTGCATGGTGGAC +
Preference number: 5 (lower is better)
Translates to: LEERGLGLAPLPYLGIQTGSVLI*VFCMVD
Trigger: GTCCACCATGCAGAACACCAATATTAACACGCTGCC...TGTCTGGATCCCGAGGTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS TCA 90 bp CACAGTGCTAGGCATGGCCTAGGTGCTCAGGGAACACTCTTTCAATaGAGCCCTCAAGATATGGGTGTTATTGCCACTTCCTCCACTGGA +
Preference number: 5 (lower is better)
Translates to: HSARHGLGAQGTLFQ*SPQDMGVIATSSTG
Trigger: TCCAGTGGAGGAAGTGGCAATAACACCCATATCTTGAGGGCTTCATTGAAAGAGTGTTCCCTGAGCACCTAGGCCATGCCTAGCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS-3UTR CAA 90 bp GGAAGTCGGAGAGAAAGCTCGCCCGTGTGCATGTTTGATATAGGCTGTGTGTGTATATTAAGGGACTGCTaGTCCCATCTCTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GSRRESSPVCMFDIGCVCILRDC*SHLLPR
Trigger: CCTGGGCAAGAGATGGGACAAGCAGTCCCTTAATAT...ACACACACAGCCTATATCAAACATGCACACGGGCGAGCTTTCTCTCCGACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
CDS GCA 90 bp CCTACTCCTTATCATTCCAGAGATATTTACTGTTTCCCGCCTGTGTaGCAACCACTGTGCTCCCAGACAGAAAGAGGACAGTTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: PTPYHSRDIYCFPPV*QPLCSQTERGQFLP
Trigger: AGGCAGGAACTGTCCTCTTTCTGTCTGGGAGCACAGTGGTTGGCACACAGGCGGGAAACAGTAAATATCTCTGGAATGATAAGGAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS TCA 90 bp AATAAACTGTTCCTTAGAGCCCGTTGGATCTGGTCCCGTGCCGTGTaGCATGAAGCATGTCCCTTAATGCTGGTGAACCTGTTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: NKLFLRARWIWSRAV*HEACPLMLVNLFPH
Trigger: ATGAGGAAACAGGTTCACCAGCATTAAGGGACATGCTTCATGTCACACGGCACGGGACCAGATCCAACGGGCTCTAAGGAACAGTTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS CCA 90 bp AGGTGCGACACACAGTACTGTAGGAATGCCCCTTCAGTGAATAGCTaGCATAAGCCTTGGCACATGAGAGACCCTGATAAAATAGCCCTA +
Preference number: 5 (lower is better)
Translates to: RCDTQYCRNAPSVNS*HKPWHMRDPDKIAL
Trigger: TAGGGCTATTTTATCAGGGTCTCTCATGTGCCAAGGCTTATGCCAGCTATTCACTGAAGGGGCATTCCTACAGTACTGTGTGTCGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS TCA 90 bp AGGCCTGTCTTCTGGCTTTCTTTAAGACCATGTGATTTCACCTTGTaGGGTTCACAGAGAACTCTGCCCCTGAATTCTGCCCCGGATAAT +
Preference number: 5 (lower is better)
Translates to: RPVFWLSLRPCDFTL*GSQRTLPLNSAPDN
Trigger: ATTATCCGGGGCAGAATTCAGGGGCAGAGTTCTCTGTGAACCTCACAAGGTGAAATCACATGGTCTTAAAGAAAGCCAGAAGACAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 90 bp CAGTACTGTAGGAATGCCCCTTCAGTGAATAGCTGGCATAAGCCTTaGCACATGAGAGACCCTGATAAAATAGCCCTACTCCTTATCATT +
Preference number: 5 (lower is better)
Translates to: QYCRNAPSVNSWHKP*HMRDPDKIALLLII
Trigger: AATGATAAGGAGTAGGGCTATTTTATCAGGGTCTCTCATGTGCCAAGGCTTATGCCAGCTATTCACTGAAGGGGCATTCCTACAGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS GCA 90 bp CCCTTTCTTAGCTGTGAACCTGGGCCAAGTGATTTCACTTCTTCTTaGCTCAGTTTCCACATTTGCAAGCTGGGATATAATGGTACTTAT +
Preference number: 5 (lower is better)
Translates to: PFLSCEPGPSDFTSS*LSFHICKLGYNGTY
Trigger: ATAAGTACCATTATATCCCAGCTTGCAAATGTGGAAACTGAGGCAAGAAGAAGTGAAATCACTTGGCCCAGGTTCACAGCTAAGAAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 90 bp CAAGTGATTTCACTTCTTCTTGCCTCAGTTTCCACATTTGCAAGCTaGGATATAATGGTACTTATTTTCCAGGGTGGTAGAGACTACTCG +
Preference number: 5 (lower is better)
Translates to: QVISLLLASVSTFAS*DIMVLIFQGGRDYS
Trigger: CGAGTAGTCTCTACCACCCTGGAAAATAAGTACCATTATATCCCAGCTTGCAAATGTGGAAACTGAGGCAAGAAGAAGTGAAATCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 72 bp CCACCGGGTCCTGCCCCGGGCTGGCAGACCAGGCCCTaGCTGGCGTCGCAGACGTGGAGTTGGTCGCAGGGC +
Preference number: 6 (lower is better)
Translates to: PPGPAPGWQTRP*LASQTWSWSQG
Trigger: GCCCTGCGACCAACTCCACGTCTGCGACGCCAGCCAGGGCCTGGTCTGCCAGCCCGGGGCAGGACCCGGTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000497421.1
CDS CCA 72 bp GGCTGGCAGACCAGGCCCTGGCTGGCGTCGCAGACGTaGAGTTGGTCGCAGGGCTCCCCCAGCCGCCGTGCA +
Preference number: 6 (lower is better)
Translates to: GWQTRPWLASQT*SWSQGSPSRRA
Trigger: TGCACGGCGGCTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGACGCCAGCCAGGGCCTGGTCTGCCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000497421.1
CDS CAA 90 bp CCCGGGCTGGCAGACCAGGCCCTGGCTGGCGTCGCAGACGTGGAGTaGGTCGCAGGGCTCCCCCAGCCGCCGTGCACATACCCGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PGLADQALAGVADVE*VAGLPQPPCTYPAA
Trigger: TGCTGCCGGGTATGTGCACGGCGGCTGGGGGAGCCCTGCGACCAACTCCACGTCTGCGACGCCAGCCAGGGCCTGGTCTGCCAGCCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000497421.1
CDS TCA 72 bp GCAGCCGCACATCCTCGCTGCACAGCGGCACGCAGGTaGAGCCGCCGTCCTCGCAGCGGCAGCGGATGCTGC +
Preference number: 6 (lower is better)
Translates to: AAAHPRCTAARR*SRRPRSGSGCC
Trigger: GCAGCATCCGCTGCCGCTGCGAGGACGGCGGCTTCACCTGCGTGCCGCTGTGCAGCGAGGATGTGCGGCTGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000190983.5
ENST00000372868.6
ENST00000465000.1
ENST00000471629.1
CDS GCA 72 bp GACGTGGAGTTGGTCGCAGGGCTCCCCCAGCCGCCGTaGACATACCCGGCAGCAGCCACAGCCATCCAGCAC +
Preference number: 6 (lower is better)
Translates to: DVELVAGLPQPP*TYPAAATAIQH
Trigger: GTGCTGGATGGCTGTGGCTGCTGCCGGGTATGTGCACGGCGGCTGGGGGAGCCCTGCGACCAACTCCACGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000497421.1
CDS GCA 72 bp GGCAGAAGCGGTTCTGGTTGGACACCCGGGTGGCCATaGCCAGCCCACAGGTGGTCGAGCAGGGTCCCCAGG +
Preference number: 6 (lower is better)
Translates to: GRSGSGWTPGWP*PAHRWSSRVPR
Trigger: CCTGGGGACCCTGCTCGACCACCTGTGGGCTGGGCATGGCCACCCGGGTGTCCAACCAGAACCGCTTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000471629.1
CDS CCA 72 bp AAGCCGCCGTCCTCGCAGCGGCAGCGGATGCTGCAGTaGGGCTGGAAGGTCTCCCCTTCCCGATACAGGCGG +
Preference number: 6 (lower is better)
Translates to: KPPSSQRQRMLQ*GWKVSPSRYRR
Trigger: CCGCCTGTATCGGGAAGGGGAGACCTTCCAGCCCCACTGCAGCATCCGCTGCCGCTGCGAGGACGGCGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000190983.5
ENST00000372868.6
ENST00000465000.1
ENST00000471629.1
CDS CCA 72 bp GGCGCTGGGTCTCCAGTCGGCAGAAGCGGTTCTGGTTaGACACCCGGGTGGCCATGCCCAGCCCACAGGTGG +
Preference number: 6 (lower is better)
Translates to: GAGSPVGRSGSG*TPGWPCPAHRW
Trigger: CCACCTGTGGGCTGGGCATGGCCACCCGGGTGTCCAACCAGAACCGCTTCTGCCGACTGGAGACCCAGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000471629.1
CDS CCA 72 bp AGGCGGCGCTGGGTCTCCAGTCGGCAGAAGCGGTTCTaGTTGGACACCCGGGTGGCCATGCCCAGCCCACAG +
Preference number: 6 (lower is better)
Translates to: RRRWVSSRQKRF*LDTRVAMPSPQ
Trigger: CTGTGGGCTGGGCATGGCCACCCGGGTGTCCAACCAGAACCGCTTCTGCCGACTGGAGACCCAGCGCCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000471629.1
CDS CCA 72 bp CCAGTCGGCAGAAGCGGTTCTGGTTGGACACCCGGGTaGCCATGCCCAGCCCACAGGTGGTCGAGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: PVGRSGSGWTPG*PCPAHRWSSRV
Trigger: GACCCTGCTCGACCACCTGTGGGCTGGGCATGGCCACCCGGGTGTCCAACCAGAACCGCTTCTGCCGACTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000471629.1
CDS GCA 72 bp GGCACAGCCTTCTCTGCAGAGCTGCCCAGATCCCGCTaGCTGAGGCAGCTGCCTCACAGTAGCTGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: GTAFSAELPRSR*LRQLPHSSWAL
Trigger: CAGGGCCCAGCTACTGTGAGGCAGCTGCCTCAGGCAGCGGGATCTGGGCAGCTCTGCAGAGAAGGCTGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS GCA 72 bp GCCGTTCACCTCACAGCTGCTGTCGTCCTCTGCCACTaGGGAGGAAAAACCGCACCCCCATCGGTGACCCGC +
Preference number: 6 (lower is better)
Translates to: AVHLTAAVVLCH*GGKTAPPSVTR
Trigger: GCGGGTCACCGATGGGGGTGCGGTTTTTCCTCCGCAGTGGCAGAGGACGACAGCAGCTGTGAGGTGAACGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS GCA 72 bp CAGGCGGCCGTTCACCTCACAGCTGCTGTCGTCCTCTaGCACTGCGGAGGAAAAACCGCACCCCCATCGGTG +
Preference number: 6 (lower is better)
Translates to: QAAVHLTAAVVL*HCGGKTAPPSV
Trigger: CACCGATGGGGGTGCGGTTTTTCCTCCGCAGTGGCAGAGGACGACAGCAGCTGTGAGGTGAACGGCCGCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 72 bp GCTGGGGCGGCCAGTGTGCGTCTCTGCACCCTCCGGTaGGCTCAGAGCCTAGGTGCGACACACAGTACTGTA +
Preference number: 6 (lower is better)
Translates to: AGAASVRLCTLR*AQSLGATHSTV
Trigger: TACAGTACTGTGTGTCGCACCTAGGCTCTGAGCCCACCGGAGGGTGCAGAGACGCACACTGGCCGCCCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 72 bp GCCACTTCCTCCACTGGACATGAACTCCTTGAGGGCTaGGGCGGCCAGTGTGCGTCTCTGCACCCTCCGGTG +
Preference number: 6 (lower is better)
Translates to: ATSSTGHELLEG*GGQCASLHPPV
Trigger: CACCGGAGGGTGCAGAGACGCACACTGGCCGCCCCAGCCCTCAAGGAGTTCATGTCCAGTGGAGGAAGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CAA 72 bp GTCCCCATTCCCAGCCCGGCTCTAGAAGGCACTGTTTaGTGGACTGCGACCCCTGGAGGGTGGGCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: VPIPSPALEGTV*WTATPGGWAGP
Trigger: AGGCCCTGCCCACCCTCCAGGGGTCGCAGTCCACAAAACAGTGCCTTCTAGAGCCGGGCTGGGAATGGGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190983.5
ENST00000372865.4
ENST00000372868.6
ENST00000465000.1
ENST00000471629.1
CDS GCA 72 bp CCCCTTCCCGATACAGGCGGCCGTTCACCTCACAGCTaGTGTCGTCCTCTGCCACTGCGGAGGAAAAACCGC +
Preference number: 6 (lower is better)
Translates to: PLPDTGGRSPHS*CRPLPLRRKNR
Trigger: GCGGTTTTTCCTCCGCAGTGGCAGAGGACGACAGCAGCTGTGAGGTGAACGGCCGCCTGTATCGGGAAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS GCA 72 bp CCCCTTCCCGATACAGGCGGCCGTTCACCTCACAGCTaGTGTCGTCCTCTGCCACTGCTTACAGAGGCACAG +
Preference number: 6 (lower is better)
Translates to: PLPDTGGRSPHS*CRPLPLLTEAQ
Trigger: CTGTGCCTCTGTAAGCAGTGGCAGAGGACGACAGCAGCTGTGAGGTGAACGGCCGCCTGTATCGGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465000.1
CDS GCA 72 bp GCGTCTCTGCACCCTCCGGTGGGCTCAGAGCCTAGGTaGGACACACAGTACTGTAGGAATGCCCCTTCAGTG +
Preference number: 6 (lower is better)
Translates to: ASLHPPVGSEPR*DTQYCRNAPSV
Trigger: CACTGAAGGGGCATTCCTACAGTACTGTGTGTCGCACCTAGGCTCTGAGCCCACCGGAGGGTGCAGAGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS TCA 72 bp CCTGCAGAGCCAGCTTTGAGCCTGAAGGTGAAACTGTaGAGGCCACCAAGGGGGTGCCTGTCCGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: PAEPALSLKVKL*RPPRGCLSVCV
Trigger: CACACACACGGACAGGCACCCCCTTGGTGGCCTTCACAGTTTCACCTTCAGGCTCAAAGCTGGCTCTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372868.6
CDS GCA 72 bp TGTGTGCGCGTGTGTGTGTGTGAAAGCCTGAGCCAGTaGCAGCACCAAGAGCCTGTGACAGCTTGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: CVRVCVCESLSQ*QHQEPVTACRG
Trigger: GCCTCTGCAAGCTGTCACAGGCTCTTGGTGCTGGCACTGGCTCAGGCTTTCACACACACACACGCGCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372865.4
ENST00000372868.6
ENST00000497421.1
CDS GCA 72 bp GCTCCCCAGTCCCTGGGAGGCAGCCTTCATTCTCCCTaGTCTTCTCTGGTCAAAAACGCTGGGAAGCACTGG +
Preference number: 6 (lower is better)
Translates to: APQSLGGSLHSP*SSLVKNAGKHW
Trigger: CCAGTGCTTCCCAGCGTTTTTGACCAGAGAAGAGCAGGGAGAATGAAGGCTGCCTCCCAGGGACTGGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CAA 72 bp GTGTTATTGCCACTTCCTCCACTGGACATGAACTCCTaGAGGGCTGGGGCGGCCAGTGTGCGTCTCTGCACC +
Preference number: 6 (lower is better)
Translates to: VLLPLPPLDMNS*RAGAASVRLCT
Trigger: GGTGCAGAGACGCACACTGGCCGCCCCAGCCCTCAAGGAGTTCATGTCCAGTGGAGGAAGTGGCAATAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CAA 90 bp AAGATATGGGTGTTATTGCCACTTCCTCCACTGGACATGAACTCCTaGAGGGCTGGGGCGGCCAGTGTGCGTCTCTGCACCCTCCGGTGG +
Preference number: 6 (lower is better)
Translates to: KIWVLLPLPPLDMNS*RAGAASVRLCTLRW
Trigger: CCACCGGAGGGTGCAGAGACGCACACTGGCCGCCCCAGCCCTCAAGGAGTTCATGTCCAGTGGAGGAAGTGGCAATAACACCCATATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS GCA 72 bp CAGGAGGTGGGTCTTCGGTGTGCCTCTCATGTCCCCTaGAGAGCCAGCTTTGAGCCTGAAGGTGAAACTGTG +
Preference number: 6 (lower is better)
Translates to: QEVGLRCASHVP*RASFEPEGETV
Trigger: CACAGTTTCACCTTCAGGCTCAAAGCTGGCTCTGCAGGGGACATGAGAGGCACACCGAAGACCCACCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372868.6
CDS CCA 72 bp AAGAGGACAGTTCCTGCCTTGAGGGACTCATGGGCTTaGGAAAGGGGGACGGGTGTGAGGGCATCATCTCCA +
Preference number: 6 (lower is better)
Translates to: KRTVPALRDSWA*ERGTGVRASSP
Trigger: TGGAGATGATGCCCTCACACCCGTCCCCCTTTCCCAAGCCCATGAGTCCCTCAAGGCAGGAACTGTCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 72 bp GACAGAAAGAGGACAGTTCCTGCCTTGAGGGACTCATaGGCTTGGGAAAGGGGGACGGGTGTGAGGGCATCA +
Preference number: 6 (lower is better)
Translates to: DRKRTVPALRDS*AWERGTGVRAS
Trigger: TGATGCCCTCACACCCGTCCCCCTTTCCCAAGCCCATGAGTCCCTCAAGGCAGGAACTGTCCTCTTTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CAA 72 bp ACTGTGCTCCCAGACAGAAAGAGGACAGTTCCTGCCTaGAGGGACTCATGGGCTTGGGAAAGGGGGACGGGT +
Preference number: 6 (lower is better)
Translates to: TVLPDRKRTVPA*RDSWAWERGTG
Trigger: ACCCGTCCCCCTTTCCCAAGCCCATGAGTCCCTCAAGGCAGGAACTGTCCTCTTTCTGTCTGGGAGCACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CAA 90 bp CCCAGACAGAAAGAGGACAGTTCCTGCCTTGAGGGACTCATGGGCTaGGGAAAGGGGGACGGGTGTGAGGGCATCATCTCCAAGACAGAA +
Preference number: 6 (lower is better)
Translates to: PRQKEDSSCLEGLMG*GKGDGCEGIISKTE
Trigger: TTCTGTCTTGGAGATGATGCCCTCACACCCGTCCCCCTTTCCCAAGCCCATGAGTCCCTCAAGGCAGGAACTGTCCTCTTTCTGTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS TCA 72 bp TGTGTGTGTGTGTGTGTGTGTGCGCGTGTGTGTGTGTaGAAGCCTGAGCCAGTGCCAGCACCAAGAGCCTGT +
Preference number: 6 (lower is better)
Translates to: CVCVCVCARVCV*KPEPVPAPRAC
Trigger: ACAGGCTCTTGGTGCTGGCACTGGCTCAGGCTTTCACACACACACACGCGCACACACACACACACACACACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372865.4
ENST00000372868.6
ENST00000497421.1
CDS GCA 72 bp AACCACTGTGCTCCCAGACAGAAAGAGGACAGTTCCTaGCTTGAGGGACTCATGGGCTTGGGAAAGGGGGAC +
Preference number: 6 (lower is better)
Translates to: NHCAPRQKEDSS*LEGLMGLGKGD
Trigger: GTCCCCCTTTCCCAAGCCCATGAGTCCCTCAAGGCAGGAACTGTCCTCTTTCTGTCTGGGAGCACAGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 72 bp CCTCCCACAACAACTAATTCTCTGGCACCCAGTCACTaGAGCCAGCTTGCAAAGCCCTGCCCCGAAGCATCA +
Preference number: 6 (lower is better)
Translates to: PPTTTNSLAPSH*SQLAKPCPEAS
Trigger: TGATGCTTCGGGGCAGGGCTTTGCAAGCTGGCTCCAGTGACTGGGTGCCAGAGAATTAGTTGTTGTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS TCA 72 bp CACCAAGTTCAGCTGGAATGGATGGGATACCTGAAGTaGGCACCCAAGGAGGTAGAGAGAGGAGGGCTGCAC +
Preference number: 6 (lower is better)
Translates to: HQVQLEWMGYLK*APKEVERGGLH
Trigger: GTGCAGCCCTCCTCTCTCTACCTCCTTGGGTGCTCACTTCAGGTATCCCATCCATTCCAGCTGAACTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS CCA 72 bp ATGCACAGGACAGCCCTCCCACAACAACTAATTCTCTaGCACCCAGTCACTGGAGCCAGCTTGCAAAGCCCT +
Preference number: 6 (lower is better)
Translates to: MHRTALPQQLIL*HPVTGASLQSP
Trigger: AGGGCTTTGCAAGCTGGCTCCAGTGACTGGGTGCCAGAGAATTAGTTGTTGTGGGAGGGCTGTCCTGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS TCA 72 bp TCAAAGGATGAGCCCATTTACCTGAAGGTGAAACTGTaGAGGCCACCAAGGGGGTGCCTGTCCGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: SKDEPIYLKVKL*RPPRGCLSVCV
Trigger: CACACACACGGACAGGCACCCCCTTGGTGGCCTTCACAGTTTCACCTTCAGGTAAATGGGCTCATCCTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372865.4
ENST00000497421.1
CDS TCA 72 bp TTCCTTAGAGCCCGTTGGATCTGGTCCCGTGCCGTGTaGCATGAAGCATGTCCCTTAATGCTGGTGAACCTG +
Preference number: 6 (lower is better)
Translates to: FLRARWIWSRAV*HEACPLMLVNL
Trigger: CAGGTTCACCAGCATTAAGGGACATGCTTCATGTCACACGGCACGGGACCAGATCCAACGGGCTCTAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS TCA 72 bp AGAGTGGTGAGGAATGTCACATGCTCGGGTGACTGCTaGATACATGGCAAACCCAGGATCCCAGCAGTGCTC +
Preference number: 6 (lower is better)
Translates to: RVVRNVTCSGDC*IHGKPRIPAVL
Trigger: GAGCACTGCTGGGATCCTGGGTTTGCCATGTATTCAGCAGTCACCCGAGCATGTGACATTCCTCACCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS CAA 72 bp CAACTAATTCTCTGGCACCCAGTCACTGGAGCCAGCTaGCAAAGCCCTGCCCCGAAGCATCAGAGAATACCA +
Preference number: 6 (lower is better)
Translates to: QLILWHPVTGAS*QSPAPKHQRIP
Trigger: TGGTATTCTCTGATGCTTCGGGGCAGGGCTTTGCAAGCTGGCTCCAGTGACTGGGTGCCAGAGAATTAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS GCA 72 bp CTGCAGATACCAGAAGCATTCAGTAAACAACCCCTTTaGAGAGCTGACCCAAGGTCTCCTAAGCTCCGTGGC +
Preference number: 6 (lower is better)
Translates to: LQIPEAFSKQPL*RADPRSPKLRG
Trigger: GCCACGGAGCTTAGGAGACCTTGGGTCAGCTCTGCAAAGGGGTTGTTTACTGAATGCTTCTGGTATCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372868.6
CDS CAA 72 bp GAAATTTGGCACTGTCTGAAGACAGACTGTCATGACTaGGGGGATGGGGAGTGCTGCTGGCATACAGTGGGT +
Preference number: 6 (lower is better)
Translates to: EIWHCLKTDCHD*GDGECCWHTVG
Trigger: ACCCACTGTATGCCAGCAGCACTCCCCATCCCCCAAGTCATGACAGTCTGTCTTCAGACAGTGCCAAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS TCA 72 bp ATTTCACCTTGTGAGGTTCACAGAGAACTCTGCCCCTaGATTCTGCCCCGGATAATGGGAGGGCTTTCTCAG +
Preference number: 6 (lower is better)
Translates to: ISPCEVHRELCP*ILPRIMGGLSQ
Trigger: CTGAGAAAGCCCTCCCATTATCCGGGGCAGAATTCAGGGGCAGAGTTCTCTGTGAACCTCACAAGGTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS GCA 72 bp AACAATTTCACCCTTGGGTTAGTTGATTTCAGGCTATaGTCCCCAGTCCCTGGGAGGCAGCCTTCATTCTCC +
Preference number: 6 (lower is better)
Translates to: NNFTLGLVDFRL*SPVPGRQPSFS
Trigger: GGAGAATGAAGGCTGCCTCCCAGGGACTGGGGAGCATAGCCTGAAATCAACTAACCCAAGGGTGAAATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS TCA 72 bp AGGCATGGCCTAGGTGCTCAGGGAACACTCTTTCAATaGAGCCCTCAAGATATGGGTGTTATTGCCACTTCC +
Preference number: 6 (lower is better)
Translates to: RHGLGAQGTLFQ*SPQDMGVIATS
Trigger: GGAAGTGGCAATAACACCCATATCTTGAGGGCTTCATTGAAAGAGTGTTCCCTGAGCACCTAGGCCATGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS TCA 72 bp CGAAGCATCAGAGAATACCAAGGCCTAGAAGAGTGGTaGGGAATGTCACATGCTCGGGTGACTGCTGAATAC +
Preference number: 6 (lower is better)
Translates to: RSIREYQGLEEW*GMSHARVTAEY
Trigger: GTATTCAGCAGTCACCCGAGCATGTGACATTCCTCACCACTCTTCTAGGCCTTGGTATTCTCTGATGCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497421.1
CDS GCA 72 bp TATCATTCCAGAGATATTTACTGTTTCCCGCCTGTGTaGCAACCACTGTGCTCCCAGACAGAAAGAGGACAG +
Preference number: 6 (lower is better)
Translates to: YHSRDIYCFPPV*QPLCSQTERGQ
Trigger: CTGTCCTCTTTCTGTCTGGGAGCACAGTGGTTGGCACACAGGCGGGAAACAGTAAATATCTCTGGAATGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 72 bp AGGAATGCCCCTTCAGTGAATAGCTGGCATAAGCCTTaGCACATGAGAGACCCTGATAAAATAGCCCTACTC +
Preference number: 6 (lower is better)
Translates to: RNAPSVNSWHKP*HMRDPDKIALL
Trigger: GAGTAGGGCTATTTTATCAGGGTCTCTCATGTGCCAAGGCTTATGCCAGCTATTCACTGAAGGGGCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 72 bp ACACAGTACTGTAGGAATGCCCCTTCAGTGAATAGCTaGCATAAGCCTTGGCACATGAGAGACCCTGATAAA +
Preference number: 6 (lower is better)
Translates to: TQYCRNAPSVNS*HKPWHMRDPDK
Trigger: TTTATCAGGGTCTCTCATGTGCCAAGGCTTATGCCAGCTATTCACTGAAGGGGCATTCCTACAGTACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 72 bp CTCAGGGAACACTCTTTCAATGAAGCCCTCAAGATATaGGTGTTATTGCCACTTCCTCCACTGGACATGAAC +
Preference number: 6 (lower is better)
Translates to: LREHSFNEALKI*VLLPLPPLDMN
Trigger: GTTCATGTCCAGTGGAGGAAGTGGCAATAACACCCATATCTTGAGGGCTTCATTGAAAGAGTGTTCCCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CAA 72 bp CACTCTTTCAATGAAGCCCTCAAGATATGGGTGTTATaGCCACTTCCTCCACTGGACATGAACTCCTTGAGG +
Preference number: 6 (lower is better)
Translates to: HSFNEALKIWVL*PLPPLDMNSLR
Trigger: CCTCAAGGAGTTCATGTCCAGTGGAGGAAGTGGCAATAACACCCATATCTTGAGGGCTTCATTGAAAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS TCA 72 bp TTCTGGCTTTCTTTAAGACCATGTGATTTCACCTTGTaGGGTTCACAGAGAACTCTGCCCCTGAATTCTGCC +
Preference number: 6 (lower is better)
Translates to: FWLSLRPCDFTL*GSQRTLPLNSA
Trigger: GGCAGAATTCAGGGGCAGAGTTCTCTGTGAACCTCACAAGGTGAAATCACATGGTCTTAAAGAAAGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CAA 72 bp ATTCTATACACGCTGAGATTTCATGCAACAAAGTCGTaGTCCACTTGTGCTGTCATCACTGTCAGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: ILYTLRFHATKS*STCAVITVRSG
Trigger: CCCTGACCTGACAGTGATGACAGCACAAGTGGACAACGACTTTGTTGCATGAAATCTCAGCGTGTATAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS GCA 72 bp AGCTGTGAACCTGGGCCAAGTGATTTCACTTCTTCTTaGCTCAGTTTCCACATTTGCAAGCTGGGATATAAT +
Preference number: 6 (lower is better)
Translates to: SCEPGPSDFTSS*LSFHICKLGYN
Trigger: ATTATATCCCAGCTTGCAAATGTGGAAACTGAGGCAAGAAGAAGTGAAATCACTTGGCCCAGGTTCACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CAA 90 bp AGTTTAAGTATTCTATACACGCTGAGATTTCATGCAACAAAGTCGTaGTCCACTTGTGCTGTCATCACTGTCAGGTCAGGGCTTAACTTG +
Preference number: 6 (lower is better)
Translates to: SLSILYTLRFHATKS*STCAVITVRSGLNL
Trigger: CAAGTTAAGCCCTGACCTGACAGTGATGACAGCACAAGTGGACAACGACTTTGTTGCATGAAATCTCAGCGTGTATAGAATACTTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471629.1
CDS CCA 72 bp TCACTTCTTCTTGCCTCAGTTTCCACATTTGCAAGCTaGGATATAATGGTACTTATTTTCCAGGGTGGTAGA +
Preference number: 6 (lower is better)
Translates to: SLLLASVSTFAS*DIMVLIFQGGR
Trigger: TCTACCACCCTGGAAAATAAGTACCATTATATCCCAGCTTGCAAATGTGGAAACTGAGGCAAGAAGAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471629.1