Pregenerated sensors for CCL8 (Homo sapiens)
Ensembl gene IDs: ENSG00000108700Ensembl transcript IDs: ENST00000394620.2
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCAACAACAGCAGTACAAAGCACACATTTGACTTACAGGAGCACTaGTTGCCAAAGAATACCAAAGTGTTTCACCTTGATGATCCATGG | + |
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Preference number: 1 (lower is better) Translates to: FNNSSTKHTFDLQEH*LPKNTKVFHLDDPW Trigger: CCATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGGCAATCAGTGCTCCTGTAAGTCAAATGTGTGCTTTGTACTGCTGTTGTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| 3UTR CAA 90 bp | ACTTACAGGAGCACTGATTGCCAAAGAATACCAAAGTGTTTCACCTaGATGATCCATGGGAGGACCCCACAACACTACAGACAGGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: TYRSTDCQRIPKCFT*MIHGRTPQHYRQVG Trigger: TCCTACCTGTCTGTAGTGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGGCAATCAGTGCTCCTGTAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCAAAGAATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAATGCCGTGAACTTAGTTaGGCTCACAGGAAAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: CQRIPKCFTLMIHGRTPQCRELS*AHRKTK Trigger: TTTTGTTTTCCTGTGAGCTCAACTAAGTTCACGGCA...TTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCAAAGAATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAAACATCACCAGGATTTTaGATTTTACATTCACTAGGA | + |
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Preference number: 2 (lower is better) Translates to: CQRIPKCFTLMIHGRTPQTSPGF*ILHSLG Trigger: TCCTAGTGAATGTAAAATGCAAAATCCTGGTGATGT...TTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| 3UTR CAA 90 bp | TATACAGTAACATCAATTTCAACAACAGCAGTACAAAGCACACATTaGACTTACAGGAGCACTGATTGCCAAAGAATACCAAAGTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: YTVTSISTTAVQSTH*TYRSTDCQRIPKCF Trigger: GAAACACTTTGGTATTCTTTGGCAATCAGTGCTCCTGTAAGTCAAATGTGTGCTTTGTACTGCTGTTGTTGAAATTGATGTTACTGTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| 3UTR CCA 72 bp | CCAAAGAATACCAAAGTGTTTCACCTTGATGATCCATaGGAGGACCCCACAACACTACAGACAGGTAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: PKNTKVFHLDDP*EDPTTLQTGRR Trigger: CCTCCTACCTGTCTGTAGTGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| 3UTR TCA 72 bp | CATCAATTTCAACAACAGCAGTACAAAGCACACATTTaGCTTACAGGAGCACTGATTGCCAAAGAATACCAA | + |
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Preference number: 3 (lower is better) Translates to: HQFQQQQYKAHI*LTGALIAKEYQ Trigger: TTGGTATTCTTTGGCAATCAGTGCTCCTGTAAGTCAAATGTGTGCTTTGTACTGCTGTTGTTGAAATTGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR TCA 90 bp | AGGACCCCACAACACTACAGACAGGTAGGAGGGAGAACAATGACATTTTGCCGTGACATTGGATGTTGGTaGTTCTTGTGTAGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RTPQHYRQVGGRTMTFCRDIGCW*FLCSSP Trigger: TGGAGAGCTACACAAGAATCACCAACATCCAATGTC...ACGGCAAAATGTCATTGTTCTCCCTCCTACCTGTCTGTAGTGTTGTGGGGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR CCA 90 bp | TGCCAAAGAATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAACACCTTGATGATCCATaGGAGGACCCCACAACACTA | + |
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Preference number: 4 (lower is better) Translates to: CQRIPKCFTLMIHGRTPQHLDDP*EDPTTL Trigger: TAGTGTTGTGGGGTCCTCCCATGGATCATCAAGGTG...TTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR TCA 90 bp | ATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAACACTACAGAGATTGGAATGGAAACTaGATCTGGCTGAGCAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: IPKCFTLMIHGRTPQHYRDWNGN*IWLSKS Trigger: GGACTTGCTCAGCCAGATTCAGTTTCCATTCCAATC...TCTGTAGTGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR TCA 90 bp | ATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAACACTACAGACTCTCAGTCCATGTATaGAGGCTCATGGCTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: IPKCFTLMIHGRTPQHYRLSVHV*RLMASD Trigger: ATCTGAAGCCATGAGCCTTCATACATGGACTGAGAG...TCTGTAGTGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR CCA 90 bp | ATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAACACTACAGAAGAGGTGAAGGTTTCTaGGTTGTTCTCAACCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: IPKCFTLMIHGRTPQHYRRGEGF*VVLNLS Trigger: AGAGAGGTTGAGAACAACCCAGAAACCTTCACCTCT...TCTGTAGTGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| 3UTR CAA 72 bp | AGCACTGATTGCCAAAGAATACCAAAGTGTTTCACCTaGATGATCCATGGGAGGACCCCACAACACTACAGA | + |
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Preference number: 4 (lower is better) Translates to: STDCQRIPKCFT*MIHGRTPQHYR Trigger: TCTGTAGTGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGGCAATCAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR TCA 90 bp | ATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAACACTACAGATGCCGTGAACTTAGTTaGGCTCACAGGAAAACAAAA | + |
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Preference number: 4 (lower is better) Translates to: IPKCFTLMIHGRTPQHYRCRELS*AHRKTK Trigger: TTTTGTTTTCCTGTGAGCTCAACTAAGTTCACGGCA...TCTGTAGTGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| 3UTR CAA 72 bp | ACATCAATTTCAACAACAGCAGTACAAAGCACACATTaGACTTACAGGAGCACTGATTGCCAAAGAATACCA | + |
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Preference number: 4 (lower is better) Translates to: TSISTTAVQSTH*TYRSTDCQRIP Trigger: TGGTATTCTTTGGCAATCAGTGCTCCTGTAAGTCAAATGTGTGCTTTGTACTGCTGTTGTTGAAATTGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR GCA 90 bp | TACAGGAGCACTGATTGCCAAAGAATACCAAAGTGTTTCACCTTGATGATCCATACATCACCAGGATTTTaGATTTTACATTCACTAGGA | + |
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Preference number: 4 (lower is better) Translates to: YRSTDCQRIPKCFTLMIHTSPGF*ILHSLG Trigger: TCCTAGTGAATGTAAAATGCAAAATCCTGGTGATGT...ATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGGCAATCAGTGCTCCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR CAA 90 bp | ATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAACACTACAGAGCAGAAACCTTCATCTaGGAGGGCAAGGGTGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: IPKCFTLMIHGRTPQHYRAETFI*EGKGVS Trigger: GCTCACACCCTTGCCCTCCAAGATGAAGGTTTCTGC...TCTGTAGTGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR CAA 90 bp | AGGACCCCACAACACTACAGACAGGTAGGAGGGAGAACAATGACATTTTGCCGTCCAAAGTGTTTCACCTaGATGATCCATGGGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: RTPQHYRQVGGRTMTFCRPKCFT*MIHGRT Trigger: GGTCCTCCCATGGATCATCAAGGTGAAACACTTTGG...ACGGCAAAATGTCATTGTTCTCCCTCCTACCTGTCTGTAGTGTTGTGGGGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGAATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAACATTGCCCCGTTTGGTCTaGAAGATCACAGCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: PKNTKVFHLDDPWEDPTTLPRLV*KITASL Trigger: CAAGGAAGCTGTGATCTTCAAGACCAAACGGGGCAA...TGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGAATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAACAGTACAAAGCACACATTaGACTTACAGGAGCACTGAT | + |
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Preference number: 5 (lower is better) Translates to: PKNTKVFHLDDPWEDPTTVQSTH*TYRSTD Trigger: ATCAGTGCTCCTGTAAGTCAAATGTGTGCTTTGTAC...TGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR CAA 90 bp | AGAATACCAAAGTGTTTCACCTTGATGATCCATGGGAGGACCCCACAACACTACCAGATTTTGAAATATTaGGTCCAGATGCTTCATGGA | + |
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Preference number: 5 (lower is better) Translates to: RIPKCFTLMIHGRTPQHYQILKY*VQMLHG Trigger: TCCATGAAGCATCTGGACCAAATATTTCAAAATCTG...GTAGTGTTGTGGGGTCCTCCCATGGATCATCAAGGTGAAACACTTTGGTATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS-3UTR CAA 90 bp | TACAGGAGCACTGATTGCCAAAGAATACCAAAGTGTTTCACCTTGATGATCCATATAGGAATTTTCCTATaGATCACGTTAAAGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: YRSTDCQRIPKCFTLMIHIGIFL*ITLKQQ Trigger: CTGCTGCTTTAACGTGATCAATAGGAAAATTCCTAT...ATGGATCATCAAGGTGAAACACTTTGGTATTCTTTGGCAATCAGTGCTCCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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| CDS CCA 72 bp | TCAAGCTCTGACTCTCAGTCCATGTATGAAGGCTCATaGCTTCAGATTTTGAAATATTTGGTCCAGATGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSSDSQSMYEGS*LQILKYLVQML Trigger: AAGCATCTGGACCAAATATTTCAAAATCTGAAGCCATGAGCCTTCATACATGGACTGAGAGTCAGAGCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394620.2 |
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