Pregenerated sensors for CCL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000275302

Ensembl transcript IDs: ENST00000613947.1, ENST00000631928.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	TCCATGTGGGGCAGCTCTGGTGGATGGGATCCTTCCTaGAGCAGCACTGGAAGCAGACTCCCTGTAACTTCC	+
Preference number: 6 (lower is better) Translates to: SMWGSSGGWDPS*SSTGSRLPVTS Trigger: GGAAGTTACAGGGAGTCTGCTTCCAGTGCTGCTCCAGGAAGGATCCCATCCACCAGAGCTGCCCCACATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613947.1 ENST00000631928.1
CDS CCA 72 bp	CAGCTCTGGTGGATGGGATCCTTCCTGGAGCAGCACTaGAAGCAGACTCCCTGTAACTTCCACCCACTGGAT	+
Preference number: 6 (lower is better) Translates to: QLWWMGSFLEQH*KQTPCNFHPLD Trigger: ATCCAGTGGGTGGAAGTTACAGGGAGTCTGCTTCCAGTGCTGCTCCAGGAAGGATCCCATCCACCAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613947.1 ENST00000631928.1
CDS CAA 72 bp	CTTCCACCCACTGGATTTAGCTGTGGGCCCCAGGAGTaGCCCAGATTAGGAACCAAGGGGCATTGCAATCAA	+
Preference number: 6 (lower is better) Translates to: LPPTGFSCGPQE*PRLGTKGHCNQ Trigger: TTGATTGCAATGCCCCTTGGTTCCTAATCTGGGCAACTCCTGGGGCCCACAGCTAAATCCAGTGGGTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613947.1 ENST00000631928.1
CDS TCA 72 bp	GAACAAATAATTAAAGGCAGAGCCAATTCAACAGTCTaGCTTCCAGCCCATCGTTTTCCTCTGCTGGTTGCT	+
Preference number: 6 (lower is better) Translates to: EQIIKGRANSTV*LPAHRFPLLVA Trigger: AGCAACCAGCAGAGGAAAACGATGGGCTGGAAGTCAGACTGTTGAATTGGCTCTGCCTTTAATTATTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613947.1 ENST00000631928.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu