Pregenerated sensors for CCL26 (Homo sapiens)
Ensembl gene IDs: ENSG00000006606Ensembl transcript IDs: ENST00000005180.9, ENST00000394905.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACAACCTTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTGGCTCCCCAGAGGGCTaGAGAGCCAAGAGCGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: TTFIKVTLGGNTLSSPAGGSPEG*RAKSGV Trigger: GACCCCGCTCTTGGCTCTGCAGCCCTCTGGGGAGCC...ACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAAGGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTCCCCAGAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGAGACTGAGACGGCCCTaGGGTCTTTGGCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QAPQRAAEPRAGSKRPRMRLRRP*GLWLSL Trigger: GAGGCTGAGCCAAAGACCCCAGGGCCGTCTCAGTCT...CATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTCTGGGGAGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTCCCCAGAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGAGGAGAGGCCCATCATaGTGCTGCAAATCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: QAPQRAAEPRAGSKRPRMRRGPS*CCKSGP Trigger: AGGGCCTGATTTGCAGCATCATGATGGGCCTCTCCT...CATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTCTGGGGAGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR GCA 90 bp | TGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCATGTAGCCTTCAGAAAAGATGGCTCCCCAGAGGGCTaGAGAGCCAAGAGCGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: WEETPSPPQRVHVAFRKDGSPEG*RAKSGV Trigger: GACCCCGCTCTTGGCTCTGCAGCCCTCTGGGGAGCC...ATCTTTTCTGAAGGCTACATGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | GCTCCCCAGAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGAAATGTCACTCCCACGTGTaGCAGTTCCAAGGTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: APQRAAEPRAGSKRPRMKCHSHV*QFQGGD Trigger: GTCTCCACCTTGGAACTGCCACACGTGGGAGTGACA...TTTCATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTCTGGGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | ACACCCTCTCCTCCCCAGCGGGTCCATGTAGCCTTCAGAAAAGATTCCGCAGGCGTGGCAGTTCCAAGGTaGAGACTCAGGAGGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TPSPPQRVHVAFRKDSAGVAVPR*RLRREA Trigger: GGCCTCCCTCCTGAGTCTCCACCTTGGAACTGCCAC...GCCTGCGGAATCTTTTCTGAAGGCTACATGGACCCGCTGGGGAGGAGAGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR GCA 90 bp | TTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCATGTCCAGTCCCTGGGATCTaGGGTACCCCTGGGACCCCA | + |
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Preference number: 4 (lower is better) Translates to: FIKVTLGGNTLSSPAGPCPVPGI*GTPGTP Trigger: TGGGGTCCCAGGGGTACCGCAGATCCCAGGGACTGG...ACATGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | GAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGAAAATTCAGCTAATATCACAGCCCGCTaGGAGCAGCTGTTACTGGTG | + |
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Preference number: 4 (lower is better) Translates to: EGCRAKSGVQASSDENSANITAR*EQLLLV Trigger: CACCAGTAACAGCTGCTCCCAGCGGGCTGTGATATT...AGCTGAATTTTCATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCATGTTGCTGCTCCAGTCCCTaGGATCTGCGGTACCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FIKVTLGGNTLSSPAGPCCCSSP*DLRYPW Trigger: CCAGGGGTACCGCAGATCCCAGGGACTGGAGCAGCA...ACATGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | GAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGAAAATTCAGCTTCAATTCCAGACTCCTaGCTCATCCTCCAGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: EGCRAKSGVQASSDENSASIPDS*LILQSL Trigger: CAAGCTCTGGAGGATGAGCCAGGAGTCTGGAATTGA...AGCTGAATTTTCATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS-3UTR TCA 90 bp | AACACCCTCTCCTCCCCAGCGGGTCCATGTAGCCTTCAGAAAAGATTCCGCAGGAGCAGCTGTTACTGGTaGATTCATAGCTTCGCACCC | + |
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Preference number: 4 (lower is better) Translates to: NTLSSPAGPCSLQKRFRRSSCYW*IHSFAP Trigger: GGGTGCGAAGCTATGAATTCACCAGTAACAGCTGCT...CCTGCGGAATCTTTTCTGAAGGCTACATGGACCCGCTGGGGAGGAGAGGGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | ACAACCTTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTGTGGCAGTTCCAAGGTaGAGACTCAGGAGGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TTFIKVTLGGNTLSSPAGVAVPR*RLRREA Trigger: GGCCTCCCTCCTGAGTCTCCACCTTGGAACTGCCAC...ACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAAGGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR TCA 90 bp | GGAGGAAACACCCTCTCCTCCCCAGCGGGTCCATGTAGCCTTCAGAAAAGATTCAGCAGCTGTTACTGGTaGATTCATAGCTTCGCACCC | + |
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Preference number: 4 (lower is better) Translates to: GGNTLSSPAGPCSLQKRFSSCYW*IHSFAP Trigger: GGGTGCGAAGCTATGAATTCACCAGTAACAGCTGCT...GAATCTTTTCTGAAGGCTACATGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCATGTGATCTGCGGTACCCCTaGGACCCCAAGTCAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: FIKVTLGGNTLSSPAGPCDLRYP*DPKSRP Trigger: AGGTCTTGACTTGGGGTCCCAGGGGTACCGCAGATC...ACATGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS-3UTR TCA 90 bp | TTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCATGTAGGAGAGGCCCATCATaGTGCTGCAAATCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: FIKVTLGGNTLSSPAGPCRRGPS*CCKSGP Trigger: AGGGCCTGATTTGCAGCATCATGATGGGCCTCTCCT...ACATGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | ACAACCTTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTTGTCACTCCCACGTGTaGCAGTTCCAAGGTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: TTFIKVTLGGNTLSSPAGCHSHV*QFQGGD Trigger: GTCTCCACCTTGGAACTGCCACACGTGGGAGTGACA...ACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAAGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | ACCTTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCAGGAAGCAGCAGGTCTTaGATATGTCACTCCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: TFIKVTLGGNTLSSPAGPGSSRS*ICHSHV Trigger: CACGTGGGAGTGACATATCCAAGACCTGCTGCTTCC...TGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR TCA 90 bp | ACCTTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCACAAACTCCTCCTGCCTaGTCCCCTTTTATGAGACTG | + |
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Preference number: 4 (lower is better) Translates to: TFIKVTLGGNTLSSPAGPQTPPA*SPFMRL Trigger: CAGTCTCATAAAAGGGGATCAGGCAGGAGGAGTTTG...TGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS-3UTR CCA 90 bp | ACAACCTTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTAATATCACAGCCCGCTaGGAGCAGCTGTTACTGGTG | + |
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Preference number: 4 (lower is better) Translates to: TTFIKVTLGGNTLSSPAGNITAR*EQLLLV Trigger: CACCAGTAACAGCTGCTCCCAGCGGGCTGTGATATT...ACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAAGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR GCA 90 bp | TTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCATGTCTCCCAAACTCCTCCTaGCTGATCCCCTTTTATGAG | + |
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Preference number: 4 (lower is better) Translates to: FIKVTLGGNTLSSPAGPCLPNSS*LIPFYE Trigger: CTCATAAAAGGGGATCAGGCAGGAGGAGTTTGGGAG...ACATGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTCCCCAGAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGGTCCAGGGAAGGGGCTaGTGGCTGTATTGGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: QAPQRAAEPRAGSKRPRMVQGRG*WLYWKQ Trigger: CTGCTTCCAATACAGCCACAAGCCCCTTCCCTGGAC...CATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTCTGGGGAGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTCCCCAGAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGGGGCTTGTGGCTGTATaGGAAGCAGCAGGTCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: QAPQRAAEPRAGSKRPRMGLVAV*EAAGLG Trigger: TCCAAGACCTGCTGCTTCCAATACAGCCACAAGCCC...CATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTCTGGGGAGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS GCA 90 bp | GCTCATCCTCCAGAGCTTGCTAGTGCTGCTCCAGTCCCTGGGATCTaGGGTACCCCTGGGACCCCAAGTCAAGACCTCCTCTTGGCTTAC | + |
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Preference number: 5 (lower is better) Translates to: AHPPELASAAPVPGI*GTPGTPSQDLLLAY Trigger: GTAAGCCAAGAGGAGGTCTTGACTTGGGGTCCCAGGGGTACCGCAGATCCCAGGGACTGGAGCAGCACTAGCAAGCTCTGGAGGATGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | GCTCCCCAGAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGAAATGGAAGCAGCAGGTCTaGGATATGTCACTCCCACGT | + |
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Preference number: 5 (lower is better) Translates to: APQRAAEPRAGSKRPRMKWKQQV*DMSLPR Trigger: ACGTGGGAGTGACATATCCAAGACCTGCTGCTTCCA...TTTCATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTCTGGGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | ACACCCTCTCCTCCCCAGCGGGTCCATGTAGCCTTCAGAAAAGATTCCGCAGGCGTCCAGGGAAGGGGCTaGTGGCTGTATTGGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TPSPPQRVHVAFRKDSAGVQGRG*WLYWKQ Trigger: CTGCTTCCAATACAGCCACAAGCCCCTTCCCTGGAC...GCCTGCGGAATCTTTTCTGAAGGCTACATGGACCCGCTGGGGAGGAGAGGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | GAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGAAAATTCAGCTGGGCTTGTGGCTGTATaGGAAGCAGCAGGTCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: EGCRAKSGVQASSDENSAGLVAV*EAAGLG Trigger: TCCAAGACCTGCTGCTTCCAATACAGCCACAAGCCC...AGCTGAATTTTCATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTCCCCAGAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGACTTTCTTGCCTCTTTaGGTAGTGAATATCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: QAPQRAAEPRAGSKRPRMTFLPL*VVNITA Trigger: GGCTGTGATATTCACTACCAAAAGAGGCAAGAAAGT...CATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTCTGGGGAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | TTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCATGTACGGCCCTGGGGTCTTaGGCTCAGCCTCAATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: FIKVTLGGNTLSSPAGPCTALGS*AQPQFQ Trigger: CTGGAATTGAGGCTGAGCCAAAGACCCCAGGGCCGT...ACATGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | TTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCATGTCTCATCCTCCAGAGCTaGCTAGTGCTGCTCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: FIKVTLGGNTLSSPAGPCLILQS*LVLLQS Trigger: GGACTGGAGCAGCACTAGCAAGCTCTGGAGGATGAG...ACATGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | GAGGGCTGCAGAGCCAAGAGCGGGGTCCAAGCGTCCTCGGATGAAAATTCAGCTTGGGTACAGACTTTCTaGCCTCTTTTGGTAGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: EGCRAKSGVQASSDENSAWVQTF*PLLVVN Trigger: ATTCACTACCAAAAGAGGCAAGAAAGTCTGTACCCA...AGCTGAATTTTCATCCGAGGACGCTTGGACCCCGCTCTTGGCTCTGCAGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | ACCTTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTCCAACTTTCTTGCCTCTTTaGGTAGTGAATATCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: TFIKVTLGGNTLSSPAGPTFLPL*VVNITA Trigger: GGCTGTGATATTCACTACCAAAAGAGGCAAGAAAGT...TGGACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS-3UTR CAA 90 bp | ACAACCTTTATTAAAGTAACTCTGGGAGGAAACACCCTCTCCTCCCCAGCGGGTTGGGTACAGACTTTCTaGCCTCTTTTGGTAGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: TTFIKVTLGGNTLSSPAGWVQTF*PLLVVN Trigger: ATTCACTACCAAAAGAGGCAAGAAAGTCTGTACCCA...ACCCGCTGGGGAGGAGAGGGTGTTTCCTCCCAGAGTTACTTTAATAAAGGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS CAA 90 bp | TTTGGCTCAGCCTCAATTCCAGACTCCTGGCTCATCCTCCAGAGCTaGCTAGTGCTGCTCCAGTCCCTGGGATCTGCGGTACCCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FGSASIPDSWLILQS*LVLLQSLGSAVPLG Trigger: TCCCAGGGGTACCGCAGATCCCAGGGACTGGAGCAGCACTAGCAAGCTCTGGAGGATGAGCCAGGAGTCTGGAATTGAGGCTGAGCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS TCA 72 bp | CCAGGAGCACAGCAGAGGCCAAGGAGAGGCCCATCATaGTGCTGCAAATCAGGCCCTTCTCAGGTTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PGAQQRPRRGPS*CCKSGPSQVSP Trigger: GGGAGAAACCTGAGAAGGGCCTGATTTGCAGCATCATGATGGGCCTCTCCTTGGCCTCTGCTGTGCTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS CCA 72 bp | CCTGGGGTCTTTGGCTCAGCCTCAATTCCAGACTCCTaGCTCATCCTCCAGAGCTTGCTAGTGCTGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGVFGSASIPDS*LILQSLLVLLQ Trigger: CTGGAGCAGCACTAGCAAGCTCTGGAGGATGAGCCAGGAGTCTGGAATTGAGGCTGAGCCAAAGACCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS CCA 72 bp | GAAGGGGCTTGTGGCTGTATTGGAAGCAGCAGGTCTTaGATATGTCACTCCCACGTGTGGCAGTTCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: EGACGCIGSSRS*ICHSHVWQFQG Trigger: ACCTTGGAACTGCCACACGTGGGAGTGACATATCCAAGACCTGCTGCTTCCAATACAGCCACAAGCCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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| CDS CAA 72 bp | TGCGGTACCCCTGGGACCCCAAGTCAAGACCTCCTCTaGGCTTACGTAAGGACATTTACAAACAGCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: CGTPGTPSQDLL*AYVRTFTNSHS Trigger: GGAATGGCTGTTTGTAAATGTCCTTACGTAAGCCAAGAGGAGGTCTTGACTTGGGGTCCCAGGGGTACCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS CAA 90 bp | CCTGGGATCTGCGGTACCCCTGGGACCCCAAGTCAAGACCTCCTCTaGGCTTACGTAAGGACATTTACAAACAGCCATTCCCAAATAACT | + |
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Preference number: 6 (lower is better) Translates to: PGICGTPGTPSQDLL*AYVRTFTNSHSQIT Trigger: AGTTATTTGGGAATGGCTGTTTGTAAATGTCCTTACGTAAGCCAAGAGGAGGTCTTGACTTGGGGTCCCAGGGGTACCGCAGATCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394905.2 |
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| CDS CAA 72 bp | TTTTTCCTTGGATGGGTACAGACTTTCTTGCCTCTTTaGGTAGTGAATATCACAGCCCGCTGGGAGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: FFLGWVQTFLPL*VVNITARWEQL Trigger: CAGCTGCTCCCAGCGGGCTGTGATATTCACTACCAAAAGAGGCAAGAAAGTCTGTACCCATCCAAGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000005180.9 ENST00000394905.2 |
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