Pregenerated sensors for CCL23 (Homo sapiens)
Ensembl gene IDs: ENSG00000274736, ENSG00000276114Ensembl transcript IDs: ENST00000613876.1, ENST00000631414.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGAGGCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTaGCAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCCAGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: LRQESWWLATCVPSP*QVQFFLVLIRVSSF Trigger: GAAGCTGGACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR TCA 90 bp | TGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCCAGCCAGAGGGTGGGCCCTaGTGGACACCAGTCTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: CPFTLTSSILPGLDPCVQPEGGP*WTPVYQ Trigger: CTGATAGACTGGTGTCCATCAGGGCCCACCCTCTGG...CTGGACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR TCA 90 bp | TTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCCCAGAGGGTGGGCCCTaGTGGACACCAGTCTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: LCPFTLTSSILPGLDPCVPEGGP*WTPVYQ Trigger: CTGATAGACTGGTGTCCATCAGGGCCCACCCTCTGG...GACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR TCA 90 bp | TTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCGTCGCCCCTTCTTGGTaGGGAAGCTGGCAGGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: LCPFTLTSSILPGLDPCVVAPSW*GSWQDP Trigger: TGGATCCTGCCAGCTTCCTCACCAAGAAGGGGCGAC...GACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAGCTTATCACTGGGGTTaGCACAGAAACGTCGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: EARKLVAGNLCPFTLTSSAYHWG*HRNVAP Trigger: AGGGGCGACGTTTCTGTGCCAACCCCAGTGATAAGC...TGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR TCA 90 bp | AAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCTGTCGCCCCTTCTTGGTaGGGAAGCTGGCAGGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: KKVGGWQLVSLHLDKFNSVAPSW*GSWQDP Trigger: TGGATCCTGCCAGCTTCCTCACCAAGAAGGGGCGAC...AGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR GCA 90 bp | GAGGCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCACTATCAGGTCCTCCCTaGAAGATGCTACAGAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: EARKLVAGNLCPFTLTSSLSGPP*KMLQSP Trigger: AGGACTCTGTAGCATCTTGCAGGGAGGACCTGATAG...TGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCGCTTATCACTGGGGTTaGCACAGAAACGTCGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LCPFTLTSSILPGLDPCVAYHWG*HRNVAP Trigger: AGGGGCGACGTTTCTGTGCCAACCCCAGTGATAAGC...GACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCAGGAAGGTAGTTaGGGCAAGAAAGTTGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: EARKLVAGNLCPFTLTSSIQEGS*GKKVGG Trigger: GCCACCAACTTTCTTGCCTCAACTACCTTCCTGAAT...TGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAGAACTTGCTTATCACTaGGGTTGGCACAGAAACGTC | + |
|
Preference number: 2 (lower is better) Translates to: EARKLVAGNLCPFTLTSSELAYH*GWHRNV Trigger: GACGTTTCTGTGCCAACCCCAGTGATAAGCAAGTTC...TGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTAAGAAAGTTGGTGGCTaGCAACTTGTGTCCCTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: ARKLVAGNLCPFTLTSSIKKVGG*QLVSLH Trigger: GTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTT...AATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCGAACTTGCTTATCACTaGGGTTGGCACAGAAACGTC | + |
|
Preference number: 2 (lower is better) Translates to: LCPFTLTSSILPGLDPCVELAYH*GWHRNV Trigger: GACGTTTCTGTGCCAACCCCAGTGATAAGCAAGTTC...GACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR GCA 72 bp | TGGGCCCTGATGGACACCAGTCTATCAGGTCCTCCCTaGAAGATGCTACAGAGTCCTTCTCCCTCAACACAT | + |
|
Preference number: 3 (lower is better) Translates to: WALMDTSLSGPP*KMLQSPSPSTH Trigger: ATGTGTTGAGGGAGAAGGACTCTGTAGCATCTTGCAGGGAGGACCTGATAGACTGGTGTCCATCAGGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAAAACGTCGCCCCTTCTaGGTGAGGAAGCTGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EARKLVAGNLCPFTLTSSKRRPF*VRKLAG Trigger: TCCTGCCAGCTTCCTCACCAAGAAGGGGCGACGTTT...TGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCAAACGTCGCCCCTTCTaGGTGAGGAAGCTGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LCPFTLTSSILPGLDPCVKRRPF*VRKLAG Trigger: TCCTGCCAGCTTCCTCACCAAGAAGGGGCGACGTTT...GACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCTTTGGTGGCTGGCAACTaGTGTCCCTTCACCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: KKVGGWQLVSLHLDKFNSLVAGN*CPFTLT Trigger: TGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAA...AGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCGTTGAGGCAAGAAAGTaGGTGGCTGGCAACTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LCPFTLTSSILPGLDPCVVEARK*VAGNLC Trigger: ACACAAGTTGCCAGCCACCAACTTTCTTGCCTCAAC...GACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCTGTTGAGGCAAGAAAGTaGGTGGCTGGCAACTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KKVGGWQLVSLHLDKFNSVEARK*VAGNLC Trigger: ACACAAGTTGCCAGCCACCAACTTTCTTGCCTCAAC...AGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR TCA 90 bp | TTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCCAGAGGGTGGGCCCTaGTGGACACCAGTCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVAGNLCPFTLTSSILPGPEGGP*WTPVYQ Trigger: CTGATAGACTGGTGTCCATCAGGGCCCACCCTCTGG...ACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCTCCAGAGGGTGGGCCCTaGTGGACACCAGTCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKVGGWQLVSLHLDKFNSPEGGP*WTPVYQ Trigger: CTGATAGACTGGTGTCCATCAGGGCCCACCCTCTGG...AGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CCA 90 bp | TTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTGCTTATCACTGGGGTTaGCACAGAAACGTCGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVAGNLCPFTLTSSILPGAYHWG*HRNVAP Trigger: AGGGGCGACGTTTCTGTGCCAACCCCAGTGATAAGC...ACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR TCA 90 bp | GAGGCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAAATTCTTCCTGGTCTTaGTCCGTGTGTCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EARKLVAGNLCPFTLTSSNSSWS*SVCPAS Trigger: TGAAGCTGGACACACGGATCAAGACCAGGAAGAATT...TGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR TCA 90 bp | GAGGCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCATCAACACATGTTTGGTaGGCTTGGCACCTACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EARKLVAGNLCPFTLTSSSTHVW*AWHLHD Trigger: GTCATGTAGGTGCCAAGCTCACCAAACATGTGTTGA...TGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR GCA 90 bp | TTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTATCAGGTCCTCCCTaGAAGATGCTACAGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVAGNLCPFTLTSSILPGLSGPP*KMLQSP Trigger: AGGACTCTGTAGCATCTTGCAGGGAGGACCTGATAG...ACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCTGCTTATCACTGGGGTTaGCACAGAAACGTCGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KKVGGWQLVSLHLDKFNSAYHWG*HRNVAP Trigger: AGGGGCGACGTTTCTGTGCCAACCCCAGTGATAAGC...AGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CCA 90 bp | GAGGCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAAAGAAAGTTGGTGGCTaGCAACTTGTGTCCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EARKLVAGNLCPFTLTSSKKVGG*QLVSLH Trigger: GTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTT...TGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR TCA 90 bp | TGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCCAGAATTCTTCCTGGTCTTaGTCCGTGTGTCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPFTLTSSILPGLDPCVQNSSWS*SVCPAS Trigger: TGAAGCTGGACACACGGATCAAGACCAGGAAGAATT...CTGGACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CCA 90 bp | TTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTGAACTTGCTTATCACTaGGGTTGGCACAGAAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVAGNLCPFTLTSSILPGELAYH*GWHRNV Trigger: GACGTTTCTGTGCCAACCCCAGTGATAAGCAAGTTC...ACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR TCA 90 bp | TTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCATTCAGGAAGGTAGTTaGGGCAAGAAAGTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCPFTLTSSILPGLDPCVIQEGS*GKKVGG Trigger: GCCACCAACTTTCTTGCCTCAACTACCTTCCTGAAT...GACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR TCA 90 bp | GCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTTCAACACATGTTTGGTaGGCTTGGCACCTACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ARKLVAGNLCPFTLTSSISTHVW*AWHLHD Trigger: GTCATGTAGGTGCCAAGCTCACCAAACATGTGTTGA...AATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CCA 90 bp | GCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTGAACTTGCTTATCACTaGGGTTGGCACAGAAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARKLVAGNLCPFTLTSSIELAYH*GWHRNV Trigger: GACGTTTCTGTGCCAACCCCAGTGATAAGCAAGTTC...AATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR TCA 90 bp | TTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCTGTGTCCCTTCACCTTaGCAAGTTCAATTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCPFTLTSSILPGLDPCVCVPSP*QVQFFL Trigger: CAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACA...GACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR TCA 90 bp | GCAAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTTGTGTCCCTTCACCTTaGCAAGTTCAATTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARKLVAGNLCPFTLTSSICVPSP*QVQFFL Trigger: CAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACA...AATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| 3UTR CAA 72 bp | AAGGTAGTTGAGGCAAGAAAGTTGGTGGCTGGCAACTaGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVVEARKLVAGN*CPFTLTSSILP Trigger: AGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTTGCCTCAACTACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CAA 90 bp | TGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCCAGAAACGTCGCCCCTTCTaGGTGAGGAAGCTGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CPFTLTSSILPGLDPCVQKRRPF*VRKLAG Trigger: TCCTGCCAGCTTCCTCACCAAGAAGGGGCGACGTTT...CTGGACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CAA 90 bp | TGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCCAGCAATTCTTCCTGGTCTaGATCCGTGTGTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPFTLTSSILPGLDPCVQQFFLV*IRVSSF Trigger: GAAGCTGGACACACGGATCAAGACCAGGAAGAATTG...CTGGACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CAA 90 bp | TTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCTTGGTGGCTGGCAACTaGTGTCCCTTCACCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LCPFTLTSSILPGLDPCVLVAGN*CPFTLT Trigger: TGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAA...GACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CAA 90 bp | TGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCCAGGTTGAGGCAAGAAAGTaGGTGGCTGGCAACTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CPFTLTSSILPGLDPCVQVEARK*VAGNLC Trigger: ACACAAGTTGCCAGCCACCAACTTTCTTGCCTCAAC...CTGGACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CAA 90 bp | TTGTGTCCCTTCACCTTGACAAGTTCAATTCTTCCTGGTCTTGATCCGTGTGTCTTGTGTCCCTTCACCTaGACAAGTTCAATTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCPFTLTSSILPGLDPCVLCPFT*TSSILP Trigger: AGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA...GACACACGGATCAAGACCAGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||
| CDS-3UTR CAA 90 bp | AAGAAAGTTGGTGGCTGGCAACTTGTGTCCCTTCACCTTGACAAGTTCAATTCTTTGTGTCCCTTCACCTaGACAAGTTCAATTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KKVGGWQLVSLHLDKFNSLCPFT*TSSILP Trigger: AGGAAGAATTGAACTTGTCAAGGTGAAGGGACACAA...AGAATTGAACTTGTCAAGGTGAAGGGACACAAGTTGCCAGCCACCAACTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000613876.1 ENST00000631414.1 |
||