Pregenerated sensors for CCL17 (Homo sapiens)
Ensembl gene IDs: ENSG00000102970Ensembl transcript IDs: ENST00000219244.9, ENST00000616880.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGGAAGGCCTCCCCTGGACCCAGGCGCTCAGGGTGGGGGCGGTaGACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTCA | + |
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Preference number: 1 (lower is better) Translates to: PWKASPGPRRSGWGR*TPTVEVPGSPGRQS Trigger: TGACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACCGCCCCCACCCTGAGCGCCTGGGTCCAGGGGAGGCCTTCCAGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| 3UTR-3UTR TCA 90 bp | GGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCCTCAGGGTGGGGGCGGTaGACACCAACGGTGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: GISLTVALLRPWKASPGPSGWGR*TPTVEV Trigger: GACCTCCACCGTTGGTGTTCACCGCCCCCACCCTGA...GGGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| 3UTR-3UTR CCA 90 bp | GGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGGGTGAACACCAACGGTaGAGGTCCCAGGTAGTCCCG | + |
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Preference number: 2 (lower is better) Translates to: GWDLPHCGSSSSLEGLPWGEHQR*RSQVVP Trigger: CGGGACTACCTGGGACCTCCACCGTTGGTGTTCACC...CCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| 3UTR-3UTR CCA 90 bp | ATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACGGTGAACACCAACGGTaGAGGTCCCAGGTAGTCCCG | + |
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Preference number: 2 (lower is better) Translates to: MGSPSLWLFFVPGRPPLDGEHQR*RSQVVP Trigger: CGGGACTACCTGGGACCTCCACCGTTGGTGTTCACC...GTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | GGTGGGGGCGGTGAACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTACTCCCGGCCCACATTaGTCCCTCGAGCTGCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GGGGEHQRWRSQVVPGDSTPGPH*SLELRG Trigger: TCCACGCAGCTCGAGGGACCAATGTGGGCCGGGAGT...ACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACCGCCCCCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | GGTGGGGGCGGTGAACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTGCTCTTCTTCGTCCCTaGAAGGCCTCCCCTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: GGGGEHQRWRSQVVPGDSALLRP*KASPGP Trigger: GGGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGC...ACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACCGCCCCCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR TCA 90 bp | AGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTCAGGGTGGGGGCGGTaGACACCAACGGTGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RGWDLPHCGSSSSLEGLPSGWGR*TPTVEV Trigger: GACCTCCACCGTTGGTGTTCACCGCCCCCACCCTGA...GGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCCAGGCGGCCAGCATCTTCAGTaGGGCCATGGTGCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPSLWLFFVPGRPPLDPGGQHLQ*GHGARS Trigger: GCTCCTGGCACCATGGCCCCACTGAAGATGCTGGCC...GCCTGGGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR TCA 90 bp | ATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCCCCCAGGAGGAGGGTaGCCAGGGCCAGCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: MGSPSLWLFFVPGRPPLDPPGGG*PGPASS Trigger: TGAAGATGCTGGCCCTGGTCACCCTCCTCCTGGGGG...GTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCAT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR GCA 90 bp | TCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCCAGGCGAGGGAGTCTCTGTGTaGAGGTCCCTCTGCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SPSLWLFFVPGRPPLDPGEGVSV*RSLCSG Trigger: CCCTGAGCAGAGGGACCTGCACACAGAGACTCCCTC...GCCTGGGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR GCA 90 bp | GGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGCGAGCTGCGTGGATGTaGTGCAGAGAAGCCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GMGSPSLWLFFVPGRPPLRAAWM*CREAPR Trigger: CCTGGGGGCTTCTCTGCAGCACATCCACGCAGCTCG...CAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | GGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGTCTTCAGTGGGGCCATaGTGCCAGGAGCCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GWDLPHCGSSSSLEGLPWSSVGP*CQEPRR Trigger: CCTCCTGGGCTCCTGGCACCATGGCCCCACTGAAGA...CCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | AGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCGCTCTTCTTCGTCCCTaGAAGGCCTCCCCTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: RGWDLPHCGSSSSLEGLPALLRP*KASPGP Trigger: GGGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGC...GGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | ATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACTCTTCAGTGGGGCCATaGTGCCAGGAGCCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: MGSPSLWLFFVPGRPPLDSSVGP*CQEPRR Trigger: CCTCCTGGGCTCCTGGCACCATGGCCCCACTGAAGA...GTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCCAGGCTGGGGTCCGAACAGATaGCCCTGCCCTGCACAGTTA | + |
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Preference number: 4 (lower is better) Translates to: SPSLWLFFVPGRPPLDPGWGPNR*PCPAQL Trigger: TAACTGTGCAGGGCAGGGCCATCTGTTCGGACCCCA...GCCTGGGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCGGTGAACACCAACGGTaGAGGTCCCAGGTAGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: WDLPHCGSSSSLEGLPWTGEHQR*RSQVVP Trigger: CGGGACTACCTGGGACCTCCACCGTTGGTGTTCACC...GGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR TCA 90 bp | CCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGCCCCCAGGAGGAGGGTaGCCAGGGCCAGCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PVQTRGWDLPHCGSSSSLPPGGG*PGPASS Trigger: TGAAGATGCTGGCCCTGGTCACCCTCCTCCTGGGGG...CAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR GCA 90 bp | ATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACGTGTGCAGGTCCCTCTaGTCAGGGAGACACCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: MGSPSLWLFFVPGRPPLDVCRSL*SGRHPG Trigger: ACCAGGGTGTCTCCCTGAGCAGAGGGACCTGCACAC...GTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219244.9 |
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| CDS-3UTR GCA 90 bp | GGTGAACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTCAGGAGTCTGAGGGAGTCTCTGTGTaGAGGTCCCTCTGCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GEHQRWRSQVVPGDSQESEGVSV*RSLCSG Trigger: CCCTGAGCAGAGGGACCTGCACACAGAGACTCCCTC...AGACTCCTGACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR GCA 90 bp | GGTGAACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTCAGGAGTCTGTGTGCAGGTCCCTCTaGTCAGGGAGACACCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GEHQRWRSQVVPGDSQESVCRSL*SGRHPA Trigger: AGCAGGGTGTCTCCCTGAGCAGAGGGACCTGCACAC...AGACTCCTGACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCGGCCCTTTGTGCCCATaGCTCCAGTTCAGACAAGGG | + |
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Preference number: 4 (lower is better) Translates to: WDLPHCGSSSSLEGLPWTGPLCP*LQFRQG Trigger: CCCTTGTCTGAACTGGAGCCATGGGCACAAAGGGCC...GGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR TCA 90 bp | TCCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTTCAGGGTGGGGGCGGTaGACACCAACGGTGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSSDKGMGSPSLWLFFVPSGWGR*TPTVEV Trigger: GACCTCCACCGTTGGTGTTCACCGCCCCCACCCTGA...AGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR GCA 90 bp | GGGGGCGGTGAACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTCAGCAGATGGCCCTGCCCTaGACAGTTACAAAAACGATG | + |
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Preference number: 4 (lower is better) Translates to: GGGEHQRWRSQVVPGDSQQMALP*TVTKTM Trigger: CATCGTTTTTGTAACTGTGCAGGGCAGGGCCATCTG...CTGACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACCGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | GGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGGATCTCCCTCACTGTaGCTCTTCTTCGTCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GMGSPSLWLFFVPGRPPLGSPSL*LFFVPG Trigger: TCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCC...CAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCGTTCAGACAAGGGGATaGGATCTCCCTCACTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: WDLPHCGSSSSLEGLPWTVQTRG*DLPHCG Trigger: GCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAAC...GGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR GCA 90 bp | GTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAACGAGCTGCGTGGATGTaGTGCAGAGAAGCCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VQTRGWDLPHCGSSSSLERAAWM*CREAPR Trigger: CCTGGGGGCTTCTCTGCAGCACATCCACGCAGCTCG...TTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TCCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGCCAGCATCTTCAGTaGGGCCATGGTGCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SSSDKGMGSPSLWLFFVPGQHLQ*GHGARS Trigger: GCTCCTGGCACCATGGCCCCACTGAAGATGCTGGCC...AGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | GTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAACTCCCGGCCCACATTaGTCCCTCGAGCTGCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VQTRGWDLPHCGSSSSLETPGPH*SLELRG Trigger: TCCACGCAGCTCGAGGGACCAATGTGGGCCGGGAGT...TTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCTCACTCTCTTGTTGTTaGGGTCCGAACAGATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: WDLPHCGSSSSLEGLPWTSLSCC*GPNRWP Trigger: GGGCCATCTGTTCGGACCCCAACAACAAGAGAGTGA...GGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR TCA 90 bp | CCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGTCAGGAGTCTGGGGTaGGGAGGCTTCAAGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: PVQTRGWDLPHCGSSSSLVRSLG*GGFKTS Trigger: AGAGGTCTTGAAGCCTCCTCACCCCAGACTCCTGAC...CAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR GCA 90 bp | AGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCCAGATGGCCCTGCCCTaGACAGTTACAAAAACGATG | + |
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Preference number: 4 (lower is better) Translates to: RGWDLPHCGSSSSLEGLPQMALP*TVTKTM Trigger: CATCGTTTTTGTAACTGTGCAGGGCAGGGCCATCTG...GGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TCCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGTCCCTCGAGCTGCGTaGATGTGCTGCAGAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSSDKGMGSPSLWLFFVPVPRAA*MCCREA Trigger: GGCTTCTCTGCAGCACATCCACGCAGCTCGAGGGAC...AGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | CCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGTGGGGTCCGAACAGATaGCCCTGCCCTGCACAGTTA | + |
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Preference number: 4 (lower is better) Translates to: PVQTRGWDLPHCGSSSSLWGPNR*PCPAQL Trigger: TAACTGTGCAGGGCAGGGCCATCTGTTCGGACCCCA...CAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | ATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACAGACAGTCAGGAGTCTaGGGTGAGGAGGCTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: MGSPSLWLFFVPGRPPLDRQSGV*GEEASR Trigger: TCTTGAAGCCTCCTCACCCCAGACTCCTGACTGTCT...GTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TCCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGTGAACACCAACGGTaGAGGTCCCAGGTAGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: SSSDKGMGSPSLWLFFVPGEHQR*RSQVVP Trigger: CGGGACTACCTGGGACCTCCACCGTTGGTGTTCACC...AGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | GGCTCCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCGGCCCTTTGTGCCCATaGCTCCAGTTCAGACAAGGG | + |
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Preference number: 4 (lower is better) Translates to: GSSSDKGMGSPSLWLFFVGPLCP*LQFRQG Trigger: CCCTTGTCTGAACTGGAGCCATGGGCACAAAGGGCC...GACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | CCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGGATCTCCCTCACTGTaGCTCTTCTTCGTCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PVQTRGWDLPHCGSSSSLGSPSL*LFFVPG Trigger: TCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCC...CAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | CCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGTTCAGACAAGGGGATaGGATCTCCCTCACTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PVQTRGWDLPHCGSSSSLVQTRG*DLPHCG Trigger: GCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAAC...CAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR TCA 90 bp | CCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGCAGGCGGTGACACTGTaGGCTCAAAGTCACTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PVQTRGWDLPHCGSSSSLQAVTL*AQSHFS Trigger: AGAGAAGTGACTTTGAGCTCACAGTGTCACCGCCTG...CAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219244.9 |
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| CDS-3UTR CCA 90 bp | ATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCAGTTACAAAAACGATaGCATCCCTGGAGCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: MGSPSLWLFFVPGRPPLDQLQKR*HPWSSP Trigger: AGGACTGCTCCAGGGATGCCATCGTTTTTGTAACTG...GTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR TCA 90 bp | GGCTCCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCGAGACACCCTGGTTTTaGATTCAGCTCTCCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: GSSSDKGMGSPSLWLFFVETPWF*IQLSHQ Trigger: CTGATGGGAGAGCTGAATTCAAAACCAGGGTGTCTC...GACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219244.9 |
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| CDS-3UTR CCA 90 bp | CAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAACGATGGCATCCCTaGAGCAGTCCTCAGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: QFRQGDGISLTVALLRPWKRWHP*SSPQMS Trigger: AGACATCTGAGGACTGCTCCAGGGATGCCATCGTTT...CCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | GTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAATCACTCTCTTGTTGTTaGGGTCCGAACAGATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VQTRGWDLPHCGSSSSLESLSCC*GPNRWP Trigger: GGGCCATCTGTTCGGACCCCAACAACAAGAGAGTGA...TTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TCCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTAGACAGTCAGGAGTCTaGGGTGAGGAGGCTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SSSDKGMGSPSLWLFFVPRQSGV*GEEASR Trigger: TCTTGAAGCCTCCTCACCCCAGACTCCTGACTGTCT...AGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CCA 90 bp | TTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGAAACGATGGCATCCCTaGAGCAGTCCTCAGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: FRQGDGISLTVALLRPWKKRWHP*SSPQMS Trigger: AGACATCTGAGGACTGCTCCAGGGATGCCATCGTTT...CTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR GCA 90 bp | CAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGTTGCAGGTATTTAACTaGATTCTTCACTCTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QFRQGDGISLTVALLRPWLQVFN*ILHSLV Trigger: AACAAGAGAGTGAAGAATGCAGTTAAATACCTGCAA...CCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR GCA 90 bp | TCCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTTTGCAGGTATTTAACTaGATTCTTCACTCTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SSSDKGMGSPSLWLFFVPLQVFN*ILHSLV Trigger: AACAAGAGAGTGAAGAATGCAGTTAAATACCTGCAA...AGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | CAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGCACTCCCGGCCCACATaGGTCCCTCGAGCTGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: QFRQGDGISLTVALLRPWHSRPT*VPRAAW Trigger: CCACGCAGCTCGAGGGACCAATGTGGGCCGGGAGTG...CCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | CCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGCACTCCCGGCCCACATaGGTCCCTCGAGCTGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: PVQTRGWDLPHCGSSSSLHSRPT*VPRAAW Trigger: CCACGCAGCTCGAGGGACCAATGTGGGCCGGGAGTG...CAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | GGGGGCGGTGAACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTCAGTTCACTCTCTTGTTGTaGGGGTCCGAACAGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: GGGEHQRWRSQVVPGDSQFTLLL*GSEQMA Trigger: GGCCATCTGTTCGGACCCCAACAACAAGAGAGTGAA...CTGACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACCGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | GGTGGGGGCGGTGAACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTGCATTCTTCACTCTCTaGTTGTTGGGGTCCGAACAG | + |
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Preference number: 5 (lower is better) Translates to: GGGGEHQRWRSQVVPGDSAFFTL*LLGSEQ Trigger: CTGTTCGGACCCCAACAACAAGAGAGTGAAGAATGC...ACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACCGCCCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | GGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGACCCTTTAATCTGGGCCCTTaGTGCCCATGGCTCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: GISLTVALLRPWKASPGPFNLGP*CPWLQF Trigger: GAACTGGAGCCATGGGCACAAAGGGCCCAGATTAAA...GGGTCCAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | GGTGGGGGCGGTGAACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTTTCTTCACTCTCTTGTaGTTGGGGTCCGAACAGATG | + |
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Preference number: 5 (lower is better) Translates to: GGGGEHQRWRSQVVPGDSFFTLL*LGSEQM Trigger: CATCTGTTCGGACCCCAACAACAAGAGAGTGAAGAA...ACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACCGCCCCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | GGCGGTGAACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTCAGGAGGCATTCTTCACTCTCTaGTTGTTGGGGTCCGAACAG | + |
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Preference number: 5 (lower is better) Translates to: GGEHQRWRSQVVPGDSQEAFFTL*LLGSEQ Trigger: CTGTTCGGACCCCAACAACAAGAGAGTGAAGAATGC...CTCCTGACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | AGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTTTAATCTGGGCCCTTaGTGCCCATGGCTCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: RGWDLPHCGSSSSLEGLPFNLGP*CPWLQF Trigger: GAACTGGAGCCATGGGCACAAAGGGCCCAGATTAAA...GGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS CCA 90 bp | CCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTCAGGAGTCTaGGGTGAGGAGGCTTCAAGACCTCTCAAGGCTTTGCAGGTATTT | + |
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Preference number: 5 (lower is better) Translates to: PTVEVPGSPGRQSGV*GEEASRPLKALQVF Trigger: AAATACCTGCAAAGCCTTGAGAGGTCTTGAAGCCTCCTCACCCCAGACTCCTGACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | GGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAAGGCCTCCCCTGGGAGACACCCTGGTTTaGAATTCAGCTCTCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: GMGSPSLWLFFVPGRPPLGDTLV*NSALPS Trigger: TGATGGGAGAGCTGAATTCAAAACCAGGGTGTCTCC...CAGGGGAGGCCTTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219244.9 |
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| CDS-3UTR CAA 90 bp | GGTGAACACCAACGGTGGAGGTCCCAGGTAGTCCCGGGAGACAGTCAGGAGTCTTTCACTCTCTTGTTGTaGGGGTCCGAACAGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: GEHQRWRSQVVPGDSQESFTLLL*GSEQMA Trigger: GGCCATCTGTTCGGACCCCAACAACAAGAGAGTGAA...AGACTCCTGACTGTCTCCCGGGACTACCTGGGACCTCCACCGTTGGTGTTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | GTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGGAATTCTTCACTCTCTTGTaGTTGGGGTCCGAACAGATG | + |
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Preference number: 5 (lower is better) Translates to: VQTRGWDLPHCGSSSSLEFFTLL*LGSEQM Trigger: CATCTGTTCGGACCCCAACAACAAGAGAGTGAAGAA...TTCCAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | CCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTGAGACCTCTCAAGGCTTaGCAGGTATTTAACTGCATT | + |
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Preference number: 5 (lower is better) Translates to: PVQTRGWDLPHCGSSSSLRPLKA*QVFNCI Trigger: AATGCAGTTAAATACCTGCAAAGCCTTGAGAGGTCT...CAGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS GCA 90 bp | AGTCAGGAGTCTGGGGTGAGGAGGCTTCAAGACCTCTCAAGGCTTTaGAGGTATTTAACTGCATTCTTCACTCTCTTGTTGTTGGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SQESGVRRLQDLSRL*RYLTAFFTLLLLGS Trigger: GGACCCCAACAACAAGAGAGTGAAGAATGCAGTTAAATACCTGCAAAGCCTTGAGAGGTCTTGAAGCCTCCTCACCCCAGACTCCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS-3UTR CAA 90 bp | TCCAGTTCAGACAAGGGGATGGGATCTCCCTCACTGTGGCTCTTCTTCGTCCCTAGACCTCTCAAGGCTTaGCAGGTATTTAACTGCATT | + |
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Preference number: 5 (lower is better) Translates to: SSSDKGMGSPSLWLFFVPRPLKA*QVFNCI Trigger: AATGCAGTTAAATACCTGCAAAGCCTTGAGAGGTCT...AGGGACGAAGAAGAGCCACAGTGAGGGAGATCCCATCCCCTTGTCTGAACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS CCA 72 bp | CCCCAGGAGGAGGGTGACCAGGGCCAGCATCTTCAGTaGGGCCATGGTGCCAGGAGCCCAGGAGGGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PQEEGDQGQHLQ*GHGARSPGGSL Trigger: GAGACTCCCTCCTGGGCTCCTGGCACCATGGCCCCACTGAAGATGCTGGCCCTGGTCACCCTCCTCCTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS TCA 72 bp | GTGCAGGTCCCTCTGCTCAGGGAGACACCCTGGTTTTaGATTCAGCTCTCCCATCAGCAGGCGGTGACACTG | + |
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Preference number: 6 (lower is better) Translates to: VQVPLLRETPWF*IQLSHQQAVTL Trigger: CAGTGTCACCGCCTGCTGATGGGAGAGCTGAATTCAAAACCAGGGTGTCTCCCTGAGCAGAGGGACCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219244.9 |
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| CDS GCA 72 bp | CTCTTGTTGTTGGGGTCCGAACAGATGGCCCTGCCCTaGACAGTTACAAAAACGATGGCATCCCTGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLLLGSEQMALP*TVTKTMASLEQ Trigger: CTGCTCCAGGGATGCCATCGTTTTTGTAACTGTGCAGGGCAGGGCCATCTGTTCGGACCCCAACAACAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS CCA 72 bp | AAAACGATGGCATCCCTGGAGCAGTCCTCAGATGTCTaGTACCACGTCTTCAGCTTTCTAAGGGGAATGGCT | + |
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Preference number: 6 (lower is better) Translates to: KTMASLEQSSDV*YHVFSFLRGMA Trigger: AGCCATTCCCCTTAGAAAGCTGAAGACGTGGTACCAGACATCTGAGGACTGCTCCAGGGATGCCATCGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS CAA 90 bp | CAGTCAGGAGTCTGGGGTGAGGAGGCTTCAAGACCTCTCAAGGCTTaGCAGGTATTTAACTGCATTCTTCACTCTCTTGTTGTTGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: QSGVWGEEASRPLKA*QVFNCILHSLVVGV Trigger: GACCCCAACAACAAGAGAGTGAAGAATGCAGTTAAATACCTGCAAAGCCTTGAGAGGTCTTGAAGCCTCCTCACCCCAGACTCCTGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS CCA 72 bp | CATTCTTCACTCTCTTGTTGTTGGGGTCCGAACAGATaGCCCTGCCCTGCACAGTTACAAAAACGATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: HSSLSCCWGPNR*PCPAQLQKRWH Trigger: ATGCCATCGTTTTTGTAACTGTGCAGGGCAGGGCCATCTGTTCGGACCCCAACAACAAGAGAGTGAAGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS CAA 72 bp | TGCAGGTATTTAACTGCATTCTTCACTCTCTTGTTGTaGGGGTCCGAACAGATGGCCCTGCCCTGCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: CRYLTAFFTLLL*GSEQMALPCTV Trigger: AACTGTGCAGGGCAGGGCCATCTGTTCGGACCCCAACAACAAGAGAGTGAAGAATGCAGTTAAATACCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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| CDS CAA 72 bp | GTCTGGGGTGAGGAGGCTTCAAGACCTCTCAAGGCTTaGCAGGTATTTAACTGCATTCTTCACTCTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: VWGEEASRPLKA*QVFNCILHSLV Trigger: AACAAGAGAGTGAAGAATGCAGTTAAATACCTGCAAAGCCTTGAGAGGTCTTGAAGCCTCCTCACCCCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000219244.9 ENST00000616880.1 |
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