Pregenerated sensors for CCL13 (Homo sapiens)
Ensembl gene IDs: ENSG00000181374Ensembl transcript IDs: ENST00000225844.7, ENST00000577681.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCATCCCTTCATGTCCATGACTCCCACAGGCATGCTCTCAACCCCTaGGAACCGAATACAAACCCACTGCCAGCAGCTCATAGTGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: ASLHVHDSHRHALNP*EPNTNPLPAAHSGR Trigger: CCTTCCACTATGAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGTTGAGAGCATGCCTGTGGGAGTCATGGACATGAAGGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| 3UTR CCA 90 bp | ATGGTAGAAGTATTCCAAAGCATAGAAGAGGAGGCCAGAGGAGAATaGAAAAGTCATTTCACGTACTCCAGCTTGATTTCAGTAGGGGTA | + |
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Preference number: 1 (lower is better) Translates to: MVEVFQSIEEEARGE*KSHFTYSSLISVGV Trigger: TACCCCTACTGAAATCAAGCTGGAGTACGTGAAATGACTTTTCCATTCTCCTCTGGCCTCCTCTTCTATGCTTTGGAATACTTCTACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| 3UTR-3UTR GCA 90 bp | CAGGCATGCTCTCAACCCCTGGGAACCGAATACAAACCCACTGCCAGCAGCTCAACTTGCTCAAGGCCTTaGTTTAGAAAAGATCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: QACSQPLGTEYKPTASSSTCSRP*FRKDQQ Trigger: TTGCTGATCTTTTCTAAAGCAAGGCCTTGAGCAAGT...TGAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGTTGAGAGCATGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCACAGGCATGCTCTCACGAATACAAACCCACTaGCAGCAGCTCATAGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LPTLQHPFMSMTPTGMLSRIQTH*QQLIVE Trigger: TTCCACTATGAGCTGCTGGCAGTGGGTTTGTATTCG...TGAGAGCATGCCTGTGGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCACAGGCATGCTCTCAAGACAGCAACCTACTTaGTCAAGGCCTTGCTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LPTLQHPFMSMTPTGMLSRQQPT*SRPCFR Trigger: TCTAAAGCAAGGCCTTGAGCAAGTAGGTTGCTGTCT...TGAGAGCATGCCTGTGGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| 3UTR-3UTR GCA 90 bp | TCACAAAGAGCTCTCCTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCCGAATACAAACCCACTaGCAGCAGCTCATAGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SQRALLPTLQHPFMSMTPRIQTH*QQLIVE Trigger: TTCCACTATGAGCTGCTGGCAGTGGGTTTGTATTCG...GGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGCTCTTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| 3UTR CAA 90 bp | ATATTTAGCAACACCTCACATTCACAAAGAGCTCTCCTTCCTACATaGCAGCATCCCTTCATGTCCATGACTCCCACAGGCATGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: IFSNTSHSQRALLPT*QHPFMSMTPTGMLS Trigger: TGAGAGCATGCCTGTGGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGCTCTTTGTGAATGTGAGGTGTTGCTAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| 3UTR CCA 72 bp | CATGTCCATGACTCCCACAGGCATGCTCTCAACCCCTaGGAACCGAATACAAACCCACTGCCAGCAGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: HVHDSHRHALNP*EPNTNPLPAAH Trigger: ATGAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGTTGAGAGCATGCCTGTGGGAGTCATGGACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| 3UTR-3UTR CAA 90 bp | ACCCCTGGGAACCGAATACAAACCCACTGCCAGCAGCTCATAGTGGAAGGGAAGTTCACGTACTCCAGCTaGATTTCAGTAGGGGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: TPGNRIQTHCQQLIVEGKFTYSS*ISVGVA Trigger: TGCTACCCCTACTGAAATCAAGCTGGAGTACGTGAA...CTTCCCTTCCACTATGAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| 3UTR-3UTR CAA 90 bp | CTCAACCCCTGGGAACCGAATACAAACCCACTGCCAGCAGCTCATAGTGGAAGGTTCACGTACTCCAGCTaGATTTCAGTAGGGGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: LNPWEPNTNPLPAAHSGRFTYSS*ISVGVA Trigger: TGCTACCCCTACTGAAATCAAGCTGGAGTACGTGAA...CCTTCCACTATGAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR TCA 90 bp | CCACAGGCATGCTCTCAACCCCTGGGAACCGAATACAAACCCACTGCCAGCAGCCAAGTCTTCAGGGTGTaGGCTTTCCGGCCCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PQACSQPLGTEYKPTASSQVFRV*AFRPRC Trigger: ACACCTGGGCCGGAAAGCTCACACCCTGAAGACTTG...GCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGTTGAGAGCATGCCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR TCA 90 bp | CCACAGGCATGCTCTCAACCCCTGGGAACCGAATACAAACCCACTGCCAGCAGCGACACCTGCTGGTGGTaGTCACATAGCTCTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PQACSQPLGTEYKPTASSDTCWW*SHSSSA Trigger: GGCTGAAGAGCTATGTGATCACCACCAGCAGGTGTC...GCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGTTGAGAGCATGCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225844.7 |
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| CDS-3UTR GCA 90 bp | CAGGCATGCTCTCAACCCCTGGGAACCGAATACAAACCCACTGCCAGCAGCTCACTGGGGGTTGAAAGCTaGTGTCATGAGCAGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: QACSQPLGTEYKPTASSSLGVES*CHEQQA Trigger: TGCCTGCTGCTCATGACAGCAGCTTTCAACCCCCAG...TGAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGTTGAGAGCATGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000225844.7 |
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| CDS-3UTR CCA 90 bp | ACCCCTGGGAACCGAATACAAACCCACTGCCAGCAGCTCATAGTGGAAGGGAAGGACGTTGAGTGCATCTaGCTGAGCAAGTCCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TPGNRIQTHCQQLIVEGKDVECI*LSKSLG Trigger: CCCCAGGGACTTGCTCAGCCAGATGCACTCAACGTC...CTTCCCTTCCACTATGAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225844.7 |
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| CDS-3UTR TCA 90 bp | CATGCTCTCAACCCCTGGGAACCGAATACAAACCCACTGCCAGCAGCTCATAGTCAAGTCTTCAGGGTGTaGGCTTTCCGGCCCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HALNPWEPNTNPLPAAHSQVFRV*AFRPRC Trigger: ACACCTGGGCCGGAAAGCTCACACCCTGAAGACTTG...ACTATGAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGTTGAGAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR TCA 90 bp | ACCCCTGGGAACCGAATACAAACCCACTGCCAGCAGCTCATAGTGGAAGGGAAGATCCCTTCATGTCCATaGCTCCCACAGGCATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TPGNRIQTHCQQLIVEGKIPSCP*LPQACS Trigger: AGAGCATGCCTGTGGGAGTCATGGACATGAAGGGAT...CTTCCCTTCCACTATGAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR GCA 90 bp | CCACAGGCATGCTCTCAACCCCTGGGAACCGAATACAAACCCACTGCCAGCAGCACTTGCTCAAGGCCTTaGTTTAGAAAAGATCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PQACSQPLGTEYKPTASSTCSRP*FRKDQQ Trigger: TTGCTGATCTTTTCTAAAGCAAGGCCTTGAGCAAGT...GCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGTTGAGAGCATGCCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR GCA 90 bp | GCTCTCCTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCACAGGCATGCTCTCCTTCCTACATTaGAGCATCCCTTCATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ALLPTLQHPFMSMTPTGMLSFLH*SIPSCP Trigger: TGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAG...CATGCCTGTGGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR TCA 90 bp | GAATGGAAAAGTCATTTCACGTACTCCAGCTTGATTTCAGTAGGGGTAGCAGAGTTGAGTGCATCTGGCTaGGCAAGTCCCTGGGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: EWKSHFTYSSLISVGVAELSASG*ASPWGL Trigger: CAACCCCCAGGGACTTGCTCAGCCAGATGCACTCAA...CTCTGCTACCCCTACTGAAATCAAGCTGGAGTACGTGAAATGACTTTTCCATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000225844.7 |
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| CDS-3UTR GCA 90 bp | CCCTGGGAACCGAATACAAACCCACTGCCAGCAGCTCATAGTGGAAGGGAAGGGCAGCAGTCCTACTATTaGATTCATCTTTCCACAATA | + |
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Preference number: 4 (lower is better) Translates to: PWEPNTNPLPAAHSGREGQQSYY*IHLSTI Trigger: TATTGTGGAAAGATGAATGCAATAGTAGGACTGCTG...CCCTTCCCTTCCACTATGAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR GCA 90 bp | GCTCTCCTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCACAGGCATGACTTGCTCAAGGCCTTaGTTTAGAAAAGATCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ALLPTLQHPFMSMTPTGMTCSRP*FRKDQQ Trigger: TTGCTGATCTTTTCTAAAGCAAGGCCTTGAGCAAGT...CATGCCTGTGGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR GCA 90 bp | TCACAAAGAGCTCTCCTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCAGACAGCAACCTACTTaGTCAAGGCCTTGCTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: SQRALLPTLQHPFMSMTPRQQPT*SRPCFR Trigger: TCTAAAGCAAGGCCTTGAGCAAGTAGGTTGCTGTCT...GGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGCTCTTTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR CCA 90 bp | ACACCTCACATTCACAAAGAGCTCTCCTTCCTACATTGCAGCATCCCTTCATGTGAAGCAGCAAGTAGATaGGACGTTGAGTGCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: TPHIHKELSFLHCSIPSCEAASR*DVECIW Trigger: CCAGATGCACTCAACGTCCCATCTACTTGCTGCTTC...ACATGAAGGGATGCTGCAATGTAGGAAGGAGAGCTCTTTGTGAATGTGAGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225844.7 |
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| CDS-3UTR GCA 90 bp | GAATGGAAAAGTCATTTCACGTACTCCAGCTTGATTTCAGTAGGGGTAGCAGAGCTCTCCTTCCTACATTaGAGCATCCCTTCATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: EWKSHFTYSSLISVGVAELSFLH*SIPSCP Trigger: TGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAG...CTCTGCTACCCCTACTGAAATCAAGCTGGAGTACGTGAAATGACTTTTCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR GCA 90 bp | TCACAAAGAGCTCTCCTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCCAGCAGTCCTACTATTaGATTCATCTTTCCACAATA | + |
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Preference number: 4 (lower is better) Translates to: SQRALLPTLQHPFMSMTPQQSYY*IHLSTI Trigger: TATTGTGGAAAGATGAATGCAATAGTAGGACTGCTG...GGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGCTCTTTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR CAA 90 bp | GCTCTCCTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCACAGGCATGGCTCTCCTTCCTACATaGCAGCATCCCTTCATGTCC | + |
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Preference number: 5 (lower is better) Translates to: ALLPTLQHPFMSMTPTGMALLPT*QHPFMS Trigger: GGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGC...CATGCCTGTGGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR CAA 90 bp | GCTCTCCTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCACAGGCATGATCTCCTTGCCCAGTTaGGTTCTGAAGCTGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: ALLPTLQHPFMSMTPTGMISLPS*VLKLLV Trigger: CACCAGCAGCTTCAGAACCAAACTGGGCAAGGAGAT...CATGCCTGTGGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577681.1 |
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| CDS-3UTR CAA 90 bp | GCTCTCCTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCACAGGCATGTTCACGTACTCCAGCTaGATTTCAGTAGGGGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: ALLPTLQHPFMSMTPTGMFTYSS*ISVGVA Trigger: TGCTACCCCTACTGAAATCAAGCTGGAGTACGTGAA...CATGCCTGTGGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR CAA 90 bp | GAATGGAAAAGTCATTTCACGTACTCCAGCTTGATTTCAGTAGGGGTAGCAGAGGCTCTCCTTCCTACATaGCAGCATCCCTTCATGTCC | + |
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Preference number: 5 (lower is better) Translates to: EWKSHFTYSSLISVGVAEALLPT*QHPFMS Trigger: GGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGC...CTCTGCTACCCCTACTGAAATCAAGCTGGAGTACGTGAAATGACTTTTCCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225844.7 ENST00000577681.1 |
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| CDS-3UTR CAA 90 bp | TCACAAAGAGCTCTCCTTCCTACATTGCAGCATCCCTTCATGTCCATGACTCCCGCAGAGACTTTCATGTaGAAGGTTAAGAGTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SQRALLPTLQHPFMSMTPAETFM*KVKSWR Trigger: TCTCCAACTCTTAACCTTCAACATGAAAGTCTCTGC...GGGAGTCATGGACATGAAGGGATGCTGCAATGTAGGAAGGAGAGCTCTTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225844.7 |
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| CDS CCA 72 bp | GATCTTCTTACTGCTAAATGTGAAGCAGCAAGTAGATaGGACGTTGAGTGCATCTGGCTGAGCAAGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: DLLTAKCEAASR*DVECIWLSKSL Trigger: CAGGGACTTGCTCAGCCAGATGCACTCAACGTCCCATCTACTTGCTGCTTCACATTTAGCAGTAAGAAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225844.7 |
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