Pregenerated sensors for CCL11 (Homo sapiens)
Ensembl gene IDs: ENSG00000172156Ensembl transcript IDs: ENST00000305869.4
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGAGTCACACTTTGGGTTCACAAGAACAATGACATTTTCATACTaGTCATCTTTGCCAGGACCTTTACAAGATTCCAGGGAGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: NESHFGFTRTMTFSY*SSLPGPLQDSREEE Trigger: CTCTTCCTCCCTGGAATCTTGTAAAGGTCCTGGCAAAGATGATCAGTATGAAAATGTCATTGTTCTTGTGAACCCAAAGTGTGACTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| 3UTR GCA 90 bp | AATAAAACCCATGCCCTTTGGACTGATAATGAGGTTACCTCAGAATaGATTGTAAGAAGGGAAAACAAATTAGGCAACACTCAGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: NKTHALWTDNEVTSE*IVRRENKLGNTQAL Trigger: CAGAGCCTGAGTGTTGCCTAATTTGTTTTCCCTTCTTACAATGCATTCTGAGGTAACCTCATTATCAGTCCAAAGGGCATGGGTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAACCAAGCCCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGGACAGGGGATCGAATTaGGGCTCCCAGGGGGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: PLTKPLLATAIFVPLSSVDRGSN*GSQGVK Trigger: CTTTACCCCCTGGGAGCCCCAATTCGATCCCCTGTC...CACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGGGCTTGGTTAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCCCAGGGACATAGTTCCCACCCCCTTAACCAAGCCCCTCTTGGCCACAGCCAACATTGCCCACACGTaGCAGGGGATCGAATTGGGG | + |
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Preference number: 2 (lower is better) Translates to: FPRDIVPTPLTKPLLATANIAHT*QGIELG Trigger: CCCCAATTCGATCCCCTGTCACGTGTGGGCAATGTT...GGCTGTGGCCAAGAGGGGCTTGGTTAAGGGGGTGGGAACTATGTCCCTGGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| 3UTR-3UTR GCA 90 bp | TTAACCAAGCCCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGGGAGAGGGGGAACATTaGCCACACGTGACAGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: LTKPLLATAIFVPLSSVWGEGEH*PHVTGD Trigger: ATCCCCTGTCACGTGTGGGCAATGTTCCCCCTCTCC...CCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGGGCTTGGTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| 3UTR-3UTR GCA 90 bp | CAAGCCCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGATTTCCATACTGATCATCTTTaGCAGGACCTTTACAAGATT | + |
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Preference number: 2 (lower is better) Translates to: QAPLGHSHLCPPQLSVDFHTDHL*QDLYKI Trigger: AATCTTGTAAAGGTCCTGGCAAAGATGATCAGTATG...GAAATCCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGGGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| 3UTR-3UTR CCA 90 bp | GACCAGCTAAGCCAAAAACTCATTTCCCAGGGACATAGTTCCCACCCCCTTAACGCAACACTCAGGCTCTaGTTTGGTTTCAAAAATGGT | + |
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Preference number: 2 (lower is better) Translates to: DQLSQKLISQGHSSHPLNATLRL*FGFKNG Trigger: ACCATTTTTGAAACCAAACCAGAGCCTGAGTGTTGC...GTTAAGGGGGTGGGAACTATGTCCCTGGGAAATGAGTTTTTGGCTTAGCTGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| 3UTR-3UTR CAA 90 bp | TCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGATTTCCCACAAAAAGGAGAGGGGGAACATaGCCCACACGTGACAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: SWPQPSLSPSAQCGFPTKRRGGT*PTRDRG Trigger: TCCCCTGTCACGTGTGGGCAATGTTCCCCCTCTCCT...TTTTGTGGGAAATCCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| 3UTR-3UTR CAA 90 bp | CAAGCCCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGATTTCCACTCAGGCTCTGGTTaGGTTTCAAAAATGGTGATT | + |
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Preference number: 3 (lower is better) Translates to: QAPLGHSHLCPPQLSVDFHSGSG*VSKMVI Trigger: AATCACCATTTTTGAAACCAAACCAGAGCCTGAGTG...GAAATCCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGGGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| 3UTR TCA 72 bp | CACTTTGGGTTCACAAGAACAATGACATTTTCATACTaGTCATCTTTGCCAGGACCTTTACAAGATTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HFGFTRTMTFSY*SSLPGPLQDSR Trigger: CCTGGAATCTTGTAAAGGTCCTGGCAAAGATGATCAGTATGAAAATGTCATTGTTCTTGTGAACCCAAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | CCCTTAACCAAGCCCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGAAAGCAGCAGGTGGTTaGGACAGAAGCTGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PLTKPLLATAIFVPLSSVKAAGG*DRSWPS Trigger: GCTGGGCCAGCTTCTGTCCCAACCACCTGCTGCTTT...CACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGGGCTTGGTTAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR TCA 90 bp | TTAACCAAGCCCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGAACATTGCCCACACGTaGCAGGGGATCGAATTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LTKPLLATAIFVPLSSVWNIAHT*QGIELG Trigger: CCCCAATTCGATCCCCTGTCACGTGTGGGCAATGTT...CCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGGGCTTGGTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | ACTGATCATCTTTGCCAGGACCTTTACAAGATTCCAGGGAGGAAGAGAGGAGAGGGTTGGGACAGAAGCTaGCCCAGCGAGCCCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TDHLCQDLYKIPGRKRGEGWDRS*PSEPLG Trigger: CCCCAGGGGCTCGCTGGGCCAGCTTCTGTCCCAACC...CTCTCCTCTCTTCCTCCCTGGAATCTTGTAAAGGTCCTGGCAAAGATGATCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | GGGAGGAAGAGAGGAGAGGGGGAACATTGCCCACACGTGACAGGGGATCGAATTCTTTGGCGTGAGAGGTaGTGGTTTCTGGGTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GRKRGEGEHCPHVTGDRILWRER*WFLGWS Trigger: AGACCAACCCAGAAACCACCACCTCTCACGCCAAAG...AATTCGATCCCCTGTCACGTGTGGGCAATGTTCCCCCTCTCCTCTCTTCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | CCCTTAACCAAGCCCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGGGTCCAGATACTTCATaGAATCCTGCACCCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLTKPLLATAIFVPLSSVGPDTS*NPAPTS Trigger: AGAAGTGGGTGCAGGATTCCATGAAGTATCTGGACC...CACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGGGCTTGGTTAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR TCA 90 bp | AACTCATTTCCCAGGGACATAGTTCCCACCCCCTTAACCAAGCCCCTCTTGGCCTGGCCAGTTTGGTCTTaGAGATCACAGCTTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NSFPRDIVPTPLTKPLLAWPVWS*RSQLSG Trigger: CCCAGAAAGCTGTGATCTTCAAGACCAAACTGGCCA...GGCCAAGAGGGGCTTGGTTAAGGGGGTGGGAACTATGTCCCTGGGAAATGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | ACTGATCATCTTTGCCAGGACCTTTACAAGATTCCAGGGAGGAAGAGAGGAGAGGACAGGGGATCGAATTaGGGCTCCCAGGGGGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: TDHLCQDLYKIPGRKRGEDRGSN*GSQGVK Trigger: CTTTACCCCCTGGGAGCCCCAATTCGATCCCCTGTC...CTCTCCTCTCTTCCTCCCTGGAATCTTGTAAAGGTCCTGGCAAAGATGATCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | CCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGATTTCCCACAATGGGAATAGAGGGCTaGAATGGGTTTGTCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PSWPQPSLSPSAQCGFPTMGIEG*NGFVSF Trigger: GAAACTGACAAACCCATTCCAGCCCTCTATTCCCAT...TGTGGGAAATCCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | GACATAGTTCCCACCCCCTTAACCAAGCCCCTCTTGGCCACAGCCATCTTTGTCAATAGAGGGCTGGAATaGGTTTGTCAGTTTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: DIVPTPLTKPLLATAIFVNRGLE*VCQFHP Trigger: AGGGTGAAACTGACAAACCCATTCCAGCCCTCTATT...GACAAAGATGGCTGTGGCCAAGAGGGGCTTGGTTAAGGGGGTGGGAACTATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR TCA 90 bp | CCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGATTTCCCACAATGACATTTTCATACTaGTCATCTTTGCCAGGACCT | + |
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Preference number: 4 (lower is better) Translates to: PSWPQPSLSPSAQCGFPTMTFSY*SSLPGP Trigger: AGGTCCTGGCAAAGATGATCAGTATGAAAATGTCAT...TGTGGGAAATCCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | GGGAGGAAGAGAGGAGAGGGGGAACATTGCCCACACGTGACAGGGGATCGAATTGGAGTTGGAGATTTTTaGTCCAGATACTTCATGGAA | + |
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Preference number: 4 (lower is better) Translates to: GRKRGEGEHCPHVTGDRIGVGDF*SRYFME Trigger: TTCCATGAAGTATCTGGACCAAAAATCTCCAACTCC...AATTCGATCCCCTGTCACGTGTGGGCAATGTTCCCCCTCTCCTCTCTTCCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR TCA 90 bp | TCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGATTTCCCACAAAACACCCTGCATTTCAATaGAGACCAGCTAAGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: SWPQPSLSPSAQCGFPTKHPAFQ*RPAKPK Trigger: TTTTGGCTTAGCTGGTCTTCATTGAAATGCAGGGTG...TTTTGTGGGAAATCCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR GCA 90 bp | AGGGACATAGTTCCCACCCCCTTAACCAAGCCCCTCTTGGCCACAGCCATCTTTCATACTGATCATCTTTaGCAGGACCTTTACAAGATT | + |
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Preference number: 4 (lower is better) Translates to: RDIVPTPLTKPLLATAIFHTDHL*QDLYKI Trigger: AATCTTGTAAAGGTCCTGGCAAAGATGATCAGTATG...AAAGATGGCTGTGGCCAAGAGGGGCTTGGTTAAGGGGGTGGGAACTATGTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | TCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGATTTCCCACAAAAGCAACACTCAGGCTCTaGTTTGGTTTCAAAAATGGT | + |
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Preference number: 4 (lower is better) Translates to: SWPQPSLSPSAQCGFPTKATLRL*FGFKNG Trigger: ACCATTTTTGAAACCAAACCAGAGCCTGAGTGTTGC...TTTTGTGGGAAATCCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR GCA 90 bp | AATGAGGTTACCTCAGAATGCATTGTAAGAAGGGAAAACAAATTAGGCAACACTGGAGAGGGGGAACATTaGCCACACGTGACAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: NEVTSECIVRRENKLGNTGEGEH*PHVTGD Trigger: ATCCCCTGTCACGTGTGGGCAATGTTCCCCCTCTCC...AGTGTTGCCTAATTTGTTTTCCCTTCTTACAATGCATTCTGAGGTAACCTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | ACTGATCATCTTTGCCAGGACCTTTACAAGATTCCAGGGAGGAAGAGAGGAGAGAAAACCCATGCCCTTTaGACTGATAATGAGGTTACC | + |
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Preference number: 4 (lower is better) Translates to: TDHLCQDLYKIPGRKRGEKTHAL*TDNEVT Trigger: GGTAACCTCATTATCAGTCCAAAGGGCATGGGTTTT...CTCTCCTCTCTTCCTCCCTGGAATCTTGTAAAGGTCCTGGCAAAGATGATCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR TCA 90 bp | AATGAGGTTACCTCAGAATGCATTGTAAGAAGGGAAAACAAATTAGGCAACACTCTTCATGTTGGAGGCTaGAGGTGTGAGCTTTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: NEVTSECIVRRENKLGNTLHVGG*RCELWR Trigger: ACGCCAAAGCTCACACCTTCAGCCTCCAACATGAAG...AGTGTTGCCTAATTTGTTTTCCCTTCTTACAATGCATTCTGAGGTAACCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CCA 90 bp | ACTGATCATCTTTGCCAGGACCTTTACAAGATTCCAGGGAGGAAGAGAGGAGAGTTATGGCTTTGGAGTTaGAGATTTTTGGTCCAGATA | + |
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Preference number: 4 (lower is better) Translates to: TDHLCQDLYKIPGRKRGELWLWS*RFLVQI Trigger: TATCTGGACCAAAAATCTCCAACTCCAAAGCCATAA...CTCTCCTCTCTTCCTCCCTGGAATCTTGTAAAGGTCCTGGCAAAGATGATCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR GCA 90 bp | ACTGATAATGAGGTTACCTCAGAATGCATTGTAAGAAGGGAAAACAAATTAGGCTTGTCAGTTTCACCCTaGATTTCAATGAAGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: TDNEVTSECIVRRENKLGLSVSP*ISMKTS Trigger: GCTGGTCTTCATTGAAATGCAGGGTGAAACTGACAA...GCCTAATTTGTTTTCCCTTCTTACAATGCATTCTGAGGTAACCTCATTATCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CAA 90 bp | GACATAGTTCCCACCCCCTTAACCAAGCCCCTCTTGGCCACAGCCATCTTTGTCAGGAGAGGGGGAACATaGCCCACACGTGACAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: DIVPTPLTKPLLATAIFVRRGGT*PTRDRG Trigger: TCCCCTGTCACGTGTGGGCAATGTTCCCCCTCTCCT...GACAAAGATGGCTGTGGCCAAGAGGGGCTTGGTTAAGGGGGTGGGAACTATGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CAA 90 bp | TTTCCCAGGGACATAGTTCCCACCCCCTTAACCAAGCCCCTCTTGGCCACAGCCAGGGCTGGAATGGGTTaGTCAGTTTCACCCTGCATT | + |
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Preference number: 5 (lower is better) Translates to: FPRDIVPTPLTKPLLATARAGMG*SVSPCI Trigger: AATGCAGGGTGAAACTGACAAACCCATTCCAGCCCT...GGCTGTGGCCAAGAGGGGCTTGGTTAAGGGGGTGGGAACTATGTCCCTGGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CAA 90 bp | CAAGCCCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGATTTCAGGGGTATCTTCCTATaGGCCAGGTTAAAGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: QAPLGHSHLCPPQLSVDFRGIFL*ARLKQQ Trigger: CTGCTGCTTTAACCTGGCCAATAGGAAGATACCCCT...GAAATCCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGGGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CAA 90 bp | GGCTGGAATGGGTTTGTCAGTTTCACCCTGCATTTCAATGAAGACCAGCTAAGCGCGGAGACCTTCATGTaGGAGGCTGAAGGTGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: GWNGFVSFTLHFNEDQLSAETFM*EAEGVS Trigger: GCTCACACCTTCAGCCTCCAACATGAAGGTCTCCGC...GCTTAGCTGGTCTTCATTGAAATGCAGGGTGAAACTGACAAACCCATTCCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CAA 90 bp | ACTGATCATCTTTGCCAGGACCTTTACAAGATTCCAGGGAGGAAGAGAGGAGAGTGGCCACAGCCATCTTaGTCCCCCTCAGCTCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: TDHLCQDLYKIPGRKRGEWPQPS*SPSAQC Trigger: ACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCA...CTCTCCTCTCTTCCTCCCTGGAATCTTGTAAAGGTCCTGGCAAAGATGATCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CAA 90 bp | TTAACCAAGCCCCTCTTGGCCACAGCCATCTTTGTCCCCCTCAGCTCAGTGTGGTGGAGTTGGAGATTTTaGGTCCAGATACTTCATGGA | + |
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Preference number: 5 (lower is better) Translates to: LTKPLLATAIFVPLSSVWWSWRF*VQILHG Trigger: TCCATGAAGTATCTGGACCAAAAATCTCCAACTCCA...CCACACTGAGCTGAGGGGGACAAAGATGGCTGTGGCCAAGAGGGGCTTGGTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CAA 90 bp | GGCTGGAATGGGTTTGTCAGTTTCACCCTGCATTTCAATGAAGACCAGCTAAGCGCTTTCTGGGGACATTaGCCACTGGTGATTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GWNGFVSFTLHFNEDQLSAFWGH*PLVILL Trigger: CAGGAGAATCACCAGTGGCAAATGTCCCCAGAAAGC...GCTTAGCTGGTCTTCATTGAAATGCAGGGTGAAACTGACAAACCCATTCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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| CDS-3UTR CAA 90 bp | AGGGACATAGTTCCCACCCCCTTAACCAAGCCCCTCTTGGCCACAGCCATCTTTCACTCAGGCTCTGGTTaGGTTTCAAAAATGGTGATT | + |
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Preference number: 5 (lower is better) Translates to: RDIVPTPLTKPLLATAIFHSGSG*VSKMVI Trigger: AATCACCATTTTTGAAACCAAACCAGAGCCTGAGTG...AAAGATGGCTGTGGCCAAGAGGGGCTTGGTTAAGGGGGTGGGAACTATGTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000305869.4 |
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