RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC93 (Homo sapiens)

Ensembl gene IDs: ENSG00000125633

Ensembl transcript IDs: ENST00000319432.9, ENST00000376300.7, ENST00000437999.5, ENST00000460781.1, ENST00000466171.1, ENST00000470650.1, ENST00000474006.1, ENST00000474546.1, ENST00000488908.1

Found 768 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTaGGGTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: LSPSKPPHDHGSGTS*GGAAHDPRSARRWQ
Trigger: CTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCACCTCAGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp GACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGCTGCTaGTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAA +
Preference number: 1 (lower is better)
Translates to: DPRSARRWQFLFASC*FRLAQVGLAGPGTE
Trigger: TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp CATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGCTaGTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACT +
Preference number: 1 (lower is better)
Translates to: HDPRSARRWQFLFAS*CFRLAQVGLAGPGT
Trigger: AGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 90 bp GGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTaGACCCTGGACCTTCTGGTTGTGCTGATGGACTCAGCGGACACT +
Preference number: 1 (lower is better)
Translates to: GGPEGSVLSENASHA*TLDLLVVLMDSADT
Trigger: AGTGTCCGCTGAGTCCATCAGCACAACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp TTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATaGCTGGACCCTGGACCTTCTGGTTGTGCTGATGGACTCAGCGGA +
Preference number: 1 (lower is better)
Translates to: FRRSRGLGIVRECFP*LDPGPSGCADGLSG
Trigger: TCCGCTGAGTCCATCAGCACAACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 90 bp CTTTCGTTCCAGTTGCTGTCACCACCAAGCCTGCTGGCTGGCACCTaGAGGAGCTGGGAACAAAAGGTACCATGGCAGGTGAAAGGCCCA +
Preference number: 1 (lower is better)
Translates to: LSFQLLSPPSLLAGT*RSWEQKVPWQVKGP
Trigger: TGGGCCTTTCACCTGCCATGGTACCTTTTGTTCCCAGCTCCTCCAGGTGCCAGCCAGCAGGCTTGGTGGTGACAGCAACTGGAACGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp GCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATaGTTCCCATGCCTGGACCCTGGACCTTCTGGTTGTGCTGATGGA +
Preference number: 1 (lower is better)
Translates to: AQGFRRSRGLGIVRE*FPCLDPGPSGCADG
Trigger: TCCATCAGCACAACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 90 bp GTGGTAAGACAAGCCCTTACTTTTGTTGCGCAGGGCCACTGGACATaGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCA +
Preference number: 1 (lower is better)
Translates to: VVRQALTFVAQGHWT*AGNGDGCKAGVEHP
Trigger: TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTGGCCCTGCGCAACAAAAGTAAGGGCTTGTCTTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 90 bp CCTGCCACCACCGTATCTAGTGCTGCCACCCACAGCCTTGCACTGTaGTCCCACTTCTTGGTTCACATGGCTGAGACATTTCTGCCCATC +
Preference number: 1 (lower is better)
Translates to: PATTVSSAATHSLAL*SHFLVHMAETFLPI
Trigger: GATGGGCAGAAATGTCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAGCACTAGATACGGTGGTGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp GGCCCTCCAAAGCCTAGTCTCAGCCCTACTTCCCAGACGGGTCTCTaGAGCCTCCTGCAGAGACTAGCTTATTCCCTCCTTTCCCAACAT +
Preference number: 1 (lower is better)
Translates to: GPPKPSLSPTSQTGL*SLLQRLAYSLLSQH
Trigger: ATGTTGGGAAAGGAGGGAATAAGCTAGTCTCTGCAGGAGGCTTCAGAGACCCGTCTGGGAAGTAGGGCTGAGACTAGGCTTTGGAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp CAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTTGTGCTaGTGGACTCAGCGGACACTGGCAGGACCCAGCTATCCTGAAAAT +
Preference number: 1 (lower is better)
Translates to: QRMLPMPGPWTFWLC*WTQRTLAGPSYPEN
Trigger: ATTTTCAGGATAGCTGGGTCCTGCCAGTGTCCGCTGAGTCCATCAGCACAACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 90 bp GCCACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTaGAACATCCACGGTATTCCCTGTGTTGTCAAGTATGCTGCAGAT +
Preference number: 1 (lower is better)
Translates to: ATGHGQAMGTDVRLA*NIHGIPCVVKYAAD
Trigger: ATCTGCAGCATACTTGACAACACAGGGAATACCGTGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp TGGCTGGCACCTGGAGGAGCTGGGAACAAAAGGTACCATGGCAGGTaGAAGGCCCAAGTGACCAACACTACATGGGCTGATCATTTCAGC +
Preference number: 1 (lower is better)
Translates to: WLAPGGAGNKRYHGR*KAQVTNTTWADHFS
Trigger: GCTGAAATGATCAGCCCATGTAGTGTTGGTCACTTGGGCCTTTCACCTGCCATGGTACCTTTTGTTCCCAGCTCCTCCAGGTGCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp CTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTaGAACCAGTGGCTGTTTTTAATCCAGCACGTGTGTGTGTTTTTA +
Preference number: 1 (lower is better)
Translates to: LLLPPGSGRPCWPWH*NQWLFLIQHVCVFL
Trigger: TAAAAACACACACACGTGCTGGATTAAAAACAGCCACTGGTTTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp CACCTACAGAGTGGGCAAACAAGACCATATGAGGCAGCAGAAATATaGGGGCACAGGTTAGAGCCAGGGCTCACTGTCCGGAGTGCCCTT +
Preference number: 1 (lower is better)
Translates to: HLQSGQTRPYEAAEI*GHRLEPGLTVRSAL
Trigger: AAGGGCACTCCGGACAGTGAGCCCTGGCTCTAACCTGTGCCCTCATATTTCTGCTGCCTCATATGGTCTTGTTTGCCCACTCTGTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp GCATTTGCACTTTTGATAGACACCGTCCAGCTGTCCCCCATGGAGTaGCTACATGTCACACTCCTGCCACCACCGTATCTAGTGCTGCCA +
Preference number: 1 (lower is better)
Translates to: AFALLIDTVQLSPME*LHVTLLPPPYLVLP
Trigger: TGGCAGCACTAGATACGGTGGTGGCAGGAGTGTGACATGTAGGCACTCCATGGGGGACAGCTGGACGGTGTCTATCAAAAGTGCAAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 90 bp AGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACTTTCCTTaGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGG +
Preference number: 1 (lower is better)
Translates to: RAWGILKMHRTRHFP*QSQPWGQMMASILW
Trigger: CCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp CTTGAGTGCAGGGAACAGTGTCTATCTCTCTCCTGGCTCAGACCATaGCCCATCTGCAGCGTAGCCTCATCAAATGTGCCTTCAATGAGG +
Preference number: 1 (lower is better)
Translates to: LECREQCLSLSWLRP*PICSVASSNVPSMR
Trigger: CCTCATTGAAGGCACATTTGATGAGGCTACGCTGCAGATGGGTCATGGTCTGAGCCAGGAGAGAGATAGACACTGTTCCCTGCACTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp CACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTaGTCGCGGCTTAAAGCAGAGCAGTCCCATGTACTCCATAAGAAG +
Preference number: 1 (lower is better)
Translates to: HAPRDHAILSCSQQL*SRLKAEQSHVLHKK
Trigger: CTTCTTATGGAGTACATGGGACTGCTCTGCTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp GTCAAAGACATCAACAAATGTCCTAGCATCTCCCCACGCACCTCGTaGTCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCT +
Preference number: 1 (lower is better)
Translates to: VKDINKCPSISPRTS*SRNLVLLTTALIAA
Trigger: AGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAGATGCTAGGACATTTGTTGATGTCTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp ACCAGACTCCTGAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTaGACTGGTCATTTCCAAGGATTAAAATCAACCCTCAGCTGCCCT +
Preference number: 1 (lower is better)
Translates to: TRLLRTRAAGAPCLI*TGHFQGLKSTLSCP
Trigger: AGGGCAGCTGAGGGTTGATTTTAATCCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTCAGGAGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp GAGGAGCTGGGAACAAAAGGTACCATGGCAGGTGAAAGGCCCAAGTaGCCAACACTACATGGGCTGATCATTTCAGCTAAATGCCTTCTG +
Preference number: 1 (lower is better)
Translates to: EELGTKGTMAGERPK*PTLHGLIISAKCLL
Trigger: CAGAAGGCATTTAGCTGAAATGATCAGCCCATGTAGTGTTGGTCACTTGGGCCTTTCACCTGCCATGGTACCTTTTGTTCCCAGCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp GCTCTGGACTTCATGAAAAGGATCAAGAGAGGGCCTGGGGGATTCTaGAGATGCACAGAACAAGGCACTTTCCTTGGCAATCCCAACCAT +
Preference number: 1 (lower is better)
Translates to: ALDFMKRIKRGPGGF*RCTEQGTFLGNPNH
Trigger: ATGGTTGGGATTGCCAAGGAAAGTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTCATGAAGTCCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 90 bp TTGCTTTGGATTCATCATGCCATACTTTCCCCATCAGCACAGAGGTaGACTCCAGTAACCCCAGAATGTCATCTGCCTCCCTACCACCTT +
Preference number: 1 (lower is better)
Translates to: LLWIHHAILSPSAQR*TPVTPECHLPPYHL
Trigger: AAGGTGGTAGGGAGGCAGATGACATTCTGGGGTTACTGGAGTCCACCTCTGTGCTGATGGGGAAAGTATGGCATGATGAATCCAAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp ATCTTCATTCTACTTTGCTTAATTCCTTCCACAATCTGTTCCATCTaGCGTAAAAACTGGTCCCGGGCAGCAGGGGAGGCCATGGCCTGT +
Preference number: 1 (lower is better)
Translates to: IFILLCLIPSTICSI*RKNWSRAAGEAMAC
Trigger: ACAGGCCATGGCCTCCCCTGCTGCCCGGGACCAGTTTTTACGTCAGATGGAACAGATTGTGGAAGGAATTAAGCAAAGTAGAATGAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR CCA 90 bp CTGAAGATGCACAGAACAAGGCACTTTCCTTGGCAATCCCAACCATaGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTATTGTAC +
Preference number: 1 (lower is better)
Translates to: LKMHRTRHFPWQSQP*GQMMASILWGSLLY
Trigger: GTACAATAAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGTTCTGTGCATCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp TTGCAAGATTTATGCAAAATGGAGCACAAACCTACAGAACATGACTaGGTTACCAGACTCCTGAGGACCAGGGCAGCAGGAGCTCCATGT +
Preference number: 1 (lower is better)
Translates to: LQDLCKMEHKPTEHD*VTRLLRTRAAGAPC
Trigger: ACATGGAGCTCCTGCTGCCCTGGTCCTCAGGAGTCTGGTAACTCAGTCATGTTCTGTAGGTTTGTGCTCCATTTTGCATAAATCTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp ATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTACAGAACATaGCTGAGTTACCAGACTCCTGAGGACCAGGGCAGCAGGAGCTCC +
Preference number: 1 (lower is better)
Translates to: MFARFMQNGAQTYRT*LSYQTPEDQGSRSS
Trigger: GGAGCTCCTGCTGCCCTGGTCCTCAGGAGTCTGGTAACTCAGTCATGTTCTGTAGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp GGGCCTACAAGCTGCTTAACAAGACAACGCAGATGTTTCCCTGACTaGAATAATTTCAAACGCAGTCAAACTTCTGTCTCCTTCCCCTGC +
Preference number: 1 (lower is better)
Translates to: GPTSCLTRQRRCFPD*NNFKRSQTSVSFPC
Trigger: GCAGGGGAAGGAGACAGAAGTTTGACTGCGTTTGAAATTATTTCAGTCAGGGAAACATCTGCGTTGTCTTGTTAAGCAGCTTGTAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp ACAATGCATCTTCAGCCTGTAATAGAAGGAATGCTCTGGACTTCATaGAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAG +
Preference number: 1 (lower is better)
Translates to: TMHLQPVIEGMLWTS*KGSREGLGDSEDAQ
Trigger: CTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTCATGAAGTCCAGAGCATTCCTTCTATTACAGGCTGAAGATGCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp TGCCTGCACTTTCAAAAAGAATTACTGGTTGCTTTGGATTCATCATaGCATACTTTCCCCATCAGCACAGAGGTGGACTCCAGTAACCCC +
Preference number: 1 (lower is better)
Translates to: CLHFQKELLVALDSS*HTFPISTEVDSSNP
Trigger: GGGGTTACTGGAGTCCACCTCTGTGCTGATGGGGAAAGTATGGCATGATGAATCCAAAGCAACCAGTAATTCTTTTTGAAAGTGCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp CGGCCCTCCTCCTTGAACTCTTTCACAGTCTTAAAGTATAGCCTCTaGTTTTCTAACAGCTCCAAGTACTGGTCGTTCAACTGGTCTCTT +
Preference number: 1 (lower is better)
Translates to: RPSSLNSFTVLKYSL*FSNSSKYWSFNWSL
Trigger: AAGAGACCAGTTGAACGACCAGTACTTGGAGCTGTTAGAAAAGCAGAGGCTATACTTTAAGACTGTGAAAGAGTTCAAGGAGGAGGGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR TCA 90 bp AAAGCCATTTTATCCAACCGGAATTTCCCAGTCAGTCATCTACCTTaGGCTAGATGCTGGGGAGAGTGTGGTAAGACAAGCCCTTACTTT +
Preference number: 1 (lower is better)
Translates to: KAILSNRNFPVSHLP*ARCWGECGKTSPYF
Trigger: AAAGTAAGGGCTTGTCTTACCACACTCTCCCCAGCATCTAGCTCAAGGTAGATGACTGACTGGGAAATTCCGGTTGGATAAAATGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp TACTGTATTAGCTCGGCACGGCTAGGGACTTCATCAATCTTGCGGTaGAAAATTGCTATTTCTCGATTTCTTCGAGCCTGTAGTAAACGT +
Preference number: 1 (lower is better)
Translates to: YCISSARLGTSSILR*KIAISRFLRACSKR
Trigger: ACGTTTACTACAGGCTCGAAGAAATCGAGAAATAGCAATTTTGCACCGCAAGATTGATGAAGTCCCTAGCCGTGCCGAGCTAATACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR CCA 90 bp CCTTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATaGGGCTCTTTATTGTACTGTTCTGCATTAAGATGTTCTTTTACT +
Preference number: 1 (lower is better)
Translates to: PWQSQPWGQMMASIL*GSLLYCSALRCSFT
Trigger: AGTAAAAGAACATCTTAATGCAGAACAGTACAATAAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp AAGGCACTGTCCACACTGAGAGTTGTCTGCAGCAAGTGTGAAATTTaGGCTCAAACTGGCTTCTGTAGTCTAATTCAAAGTGTATTCAGG +
Preference number: 1 (lower is better)
Translates to: KALSTLRVVCSKCEI*AQTGFCSLIQSVFR
Trigger: CCTGAATACACTTTGAATTAGACTACAGAAGCCAGTTTGAGCTCAAATTTCACACTTGCTGCAGACAACTCTCAGTGTGGACAGTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp AAGTGCTTCCTTAAAGTGTTCTTCCTCAATGCATGTTTCAACATCTaGACTTCAGAACAAGTGGTCAGGCTCAAAGTAACTGTGCTACTG +
Preference number: 1 (lower is better)
Translates to: KCFLKVFFLNACFNI*TSEQVVRLKVTVLL
Trigger: CAGTAGCACAGTTACTTTGAGCCTGACCACTTGTTCTGAAGTGCAGATGTTGAAACATGCATTGAGGAAGAACACTTTAAGGAAGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp CCCACTTGCTTGACATGTTTAAGCTTTTGTGTTACTGTGCAAACCTaGCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAA +
Preference number: 1 (lower is better)
Translates to: PTCLTCLSFCVTVQT*HLVCLQDLCKMEHK
Trigger: TTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAACACAAAAGCTTAAACATGTCAAGCAAGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp TATCCTGAAAATATTAAGGGCTACGAGCTAGAACCATTAAAACCATaGACTTCGGACTCTAACAGAGATATGCTTGACAAACTGGGAATT +
Preference number: 1 (lower is better)
Translates to: YPENIKGYELEPLKP*TSDSNRDMLDKLGI
Trigger: AATTCCCAGTTTGTCAAGCATATCTCTGTTAGAGTCCGAAGTTCATGGTTTTAATGGTTCTAGCTCGTAGCCCTTAATATTTTCAGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 90 bp CACCTTGTTTCATCTCAAACTTCAAGGTTACAGTATAACATACTCTaGGAGAGACCCTCTAAAGTTGTGAAAACTGTTCTCAAACTAAGC +
Preference number: 1 (lower is better)
Translates to: HLVSSQTSRLQYNIL*ERPSKVVKTVLKLS
Trigger: GCTTAGTTTGAGAACAGTTTTCACAACTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATGAAACAAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 90 bp TGTGTTGTCAAGTATGCTGCAGATCAGCACCAGATTCTCCAGTTTTaGACATTTATTGAGAAGAGGGAATACTATTATAGCATTACCTTT +
Preference number: 1 (lower is better)
Translates to: CVVKYAADQHQILQF*TFIEKREYYYSITF
Trigger: AAAGGTAATGCTATAATAGTATTCCCTCTTCTCAATAAATGTGCAAAACTGGAGAATCTGGTGCTGATCTGCAGCATACTTGACAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 90 bp CCATTGTTTAAGCTGGCCATAATGTATTTAACCATTCCCCTGTATTaGTGGCACTCTCCAACTTTTTGCTATTACAATGTTTCAACAAAA +
Preference number: 1 (lower is better)
Translates to: PLFKLAIMYLTIPLY*WHSPTFCYYNVSTK
Trigger: TTTTGTTGAAACATTGTAATAGCAAAAAGTTGGAGAGTGCCACCAATACAGGGGAATGGTTAAATACATTATGGCCAGCTTAAACAATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAATCCCAGACGGGTCTCTaGAGCCTCCTGCAGAGACTA +
Preference number: 2 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTESQTGL*SLLQRL
Trigger: TAGTCTCTGCAGGAGGCTTCAGAGACCCGTCTGGGA...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCCACGTGTTTACTGTCTaGCTCCATCAACAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: PNPEAGGDSTALGSLPASHVFTV*LHQQQP
Trigger: TGGCTGCTGTTGATGGAGTCAGACAGTAAACACGTG...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAAGGCACCTGGAGGAGCTaGGAACAAAAGGTACCATGG +
Preference number: 2 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTEGTWRS*EQKVPW
Trigger: CCATGGTACCTTTTGTTCCCAGCTCCTCCAGGTGCC...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGGCTCAGGGACCAGCTaGGGTGGAGCTGCACATGAC +
Preference number: 2 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRGSGTS*GGAAHD
Trigger: GTCATGTGCAGCTCCACCTCAGCTGGTCCCTGAGCC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAACAACGTCACAACCCTaGGGTCTGAGGTCCCGGGCA +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPTTSQP*GLRSRA
Trigger: TGCCCGGGACCTCAGACCTCAGGGTTGTGACGTTGT...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCCCTACTTGCCTTGAGTaGAGGGAACAGTGTCTATCT +
Preference number: 2 (lower is better)
Translates to: PNPEAGGDSTALGSLPASPTCLE*REQCLS
Trigger: AGATAGACACTGTTCCCTGCACTCAAGGCAAGTAGG...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCCTTTCCCAACATGCATaGCTTGTACTCCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: PNPEAGGDSTALGSLPASLSQHA*LVLLCT
Trigger: AGTGCAGAGGAGTACAAGGCATGCATGTTGGGAAAG...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGAGTTACCAGACTCCTaGGGACCAGGGCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRELPDS*GPGQQE
Trigger: CTCCTGCTGCCCTGGTCCTCAGGAGTCTGGTAACTC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATGGCTCAGGGACCAGCTaGGGTGGAGCTGCACATGAC +
Preference number: 2 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDGSGTS*GGAAHD
Trigger: GTCATGTGCAGCTCCACCTCAGCTGGTCCCTGAGCC...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCATTCAAAACCCCCACATaGCCACGGCTCAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPFKTPT*PRLRDQ
Trigger: CTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAA...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCAGCACTGGGCAGCCTaGCCGCTAGCAACTCCCTGT +
Preference number: 2 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDQHWAA*PLATPC
Trigger: ACAGGGAGTTGCTAGCGGGCAGGCTGCCCAGTGCTG...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 90 bp CTCCAGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATaGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: LQPLLKVSGGPEGSV*SENASHAWTLDLLV
Trigger: AACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 90 bp CATACAGCCACGGCTGGGGATGTTCAGGAGGCCTTCGCTTTCACCTaGGACAGCAGCATCTCGTTCTTGCGGCCCTCCTCCTTGAACTCT +
Preference number: 2 (lower is better)
Translates to: HTATAGDVQEAFAFT*DSSISFLRPSSLNS
Trigger: AGAGTTCAAGGAGGAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAGCCGTGGCTGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR-3UTR TCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGTCCTGGCTCAGACCATaGCCCATCTGCAGCGTAGCC +
Preference number: 2 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRSWLRP*PICSVA
Trigger: GGCTACGCTGCAGATGGGTCATGGTCTGAGCCAGGA...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTGAGTTACCAGACTCCTaGGGACCAGGGCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: CFNLALQNPHMTTAQGPAELPDS*GPGQQE
Trigger: CTCCTGCTGCCCTGGTCCTCAGGAGTCTGGTAACTC...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCAGCAAGTGTGAAATTTaGGCTCAAACTGGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: PNPEAGGDSTALGSLPASSKCEI*AQTGFC
Trigger: ACAGAAGCCAGTTTGAGCTCAAATTTCACACTTGCT...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAAGCAACTCCCTGTGCTaGTTGAGCAGGGAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: LTVRSALSGRSASVTRDVSNSLC*LSREPL
Trigger: GAGAGGCTCCCTGCTCAATCAGCACAGGGAGTTGCT...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAGGAGCCTCTCTCTCCTaGGGAAACCTGGTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LTVRSALSGRSASVTRDVGASLS*GNLVPP
Trigger: AGGAGGAACCAGGTTTCCCCAGGAGAGAGAGGCTCC...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCCCCAACCCAGAGGCTaGCGGAGATTCCACAGCACT +
Preference number: 2 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMPQPRG*RRFHST
Trigger: AGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGGG...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAAGGCACTGTCCACACTaGGAGTTGTCTGCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPRHCPH*ELSAAS
Trigger: ACTTGCTGCAGACAACTCTCAGTGTGGACAGTGCCT...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAATAGCCCTGGGAAGATaGCCCCTTCTGGTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGIALGR*PLLVLQ
Trigger: CTGGAGCACCAGAAGGGGTCATCTTCCCAGGGCTAT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTACCAAGCCTGCTGGCTaGCACCTGGAGGAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFTKPAG*HLEELG
Trigger: TCCCAGCTCCTCCAGGTGCCAGCCAGCAGGCTTGGT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGACCAAGCCTGCTGGCTaGCACCTGGAGGAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKTKPAG*HLEELG
Trigger: TCCCAGCTCCTCCAGGTGCCAGCCAGCAGGCTTGGT...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 90 bp GTCACACTCCTGCCACCACCGTATCTAGTGCTGCCACCCACAGCCTaGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGACATTTC +
Preference number: 2 (lower is better)
Translates to: VTLLPPPYLVLPPTA*HCGPTSWFTWLRHF
Trigger: GAAATGTCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAGCACTAGATACGGTGGTGGCAGGAGTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCACACGTGTTTACTGTCTaGCTCCATCAACAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPHVFTV*LHQQQP
Trigger: TGGCTGCTGTTGATGGAGTCAGACAGTAAACACGTG...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAACACCCTACTTGCCTTaGGTGCAGGGAACAGTGTCT +
Preference number: 2 (lower is better)
Translates to: LTVRSALSGRSASVTRDVTPYLP*VQGTVS
Trigger: AGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGT...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTAGGTGGAGCTGCACATaGCCCAAGAAGCGCTCGCAG +
Preference number: 2 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFRWSCT*PKKRSQ
Trigger: CTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCACCT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATAGGTGGCTTCTGAAATaGTCAGGGGCCTTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDRWLLK*SGALGH
Trigger: ATGCCCCAAGGCCCCTGATCATTTCAGAAGCCACCT...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAGGGCATGGCACTTTGTaGGGTAGTAAAAGGACTGTC +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPGHGTL*GSKRTV
Trigger: GACAGTCCTTTTACTACCTCACAAAGTGCCATGCCC...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACACAACGTCACAACCCTaGGGTCTGAGGTCCCGGGCA +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHTTSQP*GLRSRA
Trigger: TGCCCGGGACCTCAGACCTCAGGGTTGTGACGTTGT...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAACCTCCCTTTTAGGGTaGTCAGTCACCTACAGAGTG +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPTSLLG*SVTYRV
Trigger: CACTCTGTAGGTGACTGATCACCCTAAAAGGGAGGT...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTCTATTTGCAAGCTGCTaGTTCCGCCTGGCTCAGGTA +
Preference number: 2 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGLFASC*FRLAQV
Trigger: TACCTGAGCCAGGCGGAAGCAGCAGCTTGCAAATAG...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTTCAGTTAGCCAGGGGTaGGCCTACAAGCTGCTTAAC +
Preference number: 2 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGSVSQG*AYKLLN
Trigger: GTTAAGCAGCTTGTAGGCCCACCCCTGGCTAACTGA...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCCCTCCCTACCACCTTTaGACAAATATTCAAATAACT +
Preference number: 2 (lower is better)
Translates to: PNPEAGGDSTALGSLPASPPYHL*TNIQIT
Trigger: AGTTATTTGAATATTTGTCCAAAGGTGGTAGGGAGG...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTCCATCAGCACAGAGGTaGACTCCAGTAACCCCAGAA +
Preference number: 2 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGPSAQR*TPVTPE
Trigger: TTCTGGGGTTACTGGAGTCCACCTCTGTGCTGATGG...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTATAAGAAGCAAGAAGTaGGAGGGAGCCCCCAACCCA +
Preference number: 2 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGIRSKK*EGAPNP
Trigger: TGGGTTGGGGGCTCCCTCCCACTTCTTGCTTCTTAT...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTACACCCTACTTGCCTTaGGTGCAGGGAACAGTGTCT +
Preference number: 2 (lower is better)
Translates to: CFNLALQNPHMTTAQGPATPYLP*VQGTVS
Trigger: AGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGT...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTTCCCAGACGGGTCTCTaGAGCCTCCTGCAGAGACTA +
Preference number: 2 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFSQTGL*SLLQRL
Trigger: TAGTCTCTGCAGGAGGCTTCAGAGACCCGTCTGGGA...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGATGCTGGCCCTGGCACTaGAACCAGTGGCTGTTTTTA +
Preference number: 2 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGCWPWH*NQWLFL
Trigger: TAAAAACAGCCACTGGTTTCAGTGCCAGGGCCAGCA...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGAGGCACTGTCCACACTaGGAGTTGTCTGCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMRHCPH*ELSAAS
Trigger: ACTTGCTGCAGACAACTCTCAGTGTGGACAGTGCCT...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTGCTCCAGGTGGCTTCTaGAATGATCAGGGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFAPGGF*NDQGPW
Trigger: CCAAGGCCCCTGATCATTTCAGAAGCCACCTGGAGC...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGTGCTCACAACAGCTCTaGTCGCGGCTTAAAGCAGAG +
Preference number: 2 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMCSQQL*SRLKAE
Trigger: CTCTGCTTTAAGCCGCGATCAGAGCTGTTGTGAGCA...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGGGCATGGCACTTTGTaGGGTAGTAAAAGGACTGTC +
Preference number: 2 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRGHGTL*GSKRTV
Trigger: GACAGTCCTTTTACTACCTCACAAAGTGCCATGCCC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCAACTTTCGTTCCAGTTaGTGTCACCACCAAGCCTGC +
Preference number: 2 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCNFRSS*CHHQAC
Trigger: GCAGGCTTGGTGGTGACAGCAACTGGAACGAAAGTT...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTACACAGCCCCTCTGCATaGTGTGACTCACATGAACAT +
Preference number: 2 (lower is better)
Translates to: LTVRSALSGRSASVTRDVHSPSA*CDSHEH
Trigger: ATGTTCATGTGAGTCACAGCATGCAGAGGGGCTGTG...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGACACAGCCCCTCTGCATaGTGTGACTCACATGAACAT +
Preference number: 2 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRHSPSA*CDSHEH
Trigger: ATGTTCATGTGAGTCACAGCATGCAGAGGGGCTGTG...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAGTGGCAGTTTCTATTTaGAAGCTGCTGCTTCCGCCT +
Preference number: 2 (lower is better)
Translates to: LTVRSALSGRSASVTRDVVAVSI*KLLLPP
Trigger: AGGCGGAAGCAGCAGCTTGCAAATAGAAACTGCCAC...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCCCCTGCCCTCAGAGTaGCACCTGTTCTTTTGCAAT +
Preference number: 2 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMPLPSE*HLFFCN
Trigger: ATTGCAAAAGAACAGGTGGCACTCTGAGGGCAGGGG...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAGGTGGGCCTACAAGCTaGTTAACAAGACAACGCAGA +
Preference number: 2 (lower is better)
Translates to: LTVRSALSGRSASVTRDVGGPTS*LTRQRR
Trigger: TCTGCGTTGTCTTGTTAAGCAGCTTGTAGGCCCACC...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACCTGTATCTGCCTCCCTaGGCCACCTGCTGGGTACTT +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHLYLPP*ATCWVL
Trigger: AAGTACCCAGCAGGTGGCCCAGGGAGGCAGATACAG...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 90 bp GAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACTTTCCTaGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATG +
Preference number: 2 (lower is better)
Translates to: EGLGDSEDAQNKALS*AIPTMGTDDGIHPM
Trigger: CATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCAGGAGCTCCATGTTTaGTCTGCACTGGTCATTTCC +
Preference number: 2 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDQELHV*SALVIS
Trigger: GGAAATGACCAGTGCAGATCAAACATGGAGCTCCTG...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTAGGTGGCTTCTGAAATaGTCAGGGGCCTTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFRWLLK*SGALGH
Trigger: ATGCCCCAAGGCCCCTGATCATTTCAGAAGCCACCT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACACCTTCTGGTTGTGCTaGTGGACTCAGCGGACACTG +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHTFWLC*WTQRTL
Trigger: CAGTGTCCGCTGAGTCCATCAGCACAACCAGAAGGT...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCACCTGCTGGGTACTTGTaGAGTAGGAACTGTGTTTTA +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPPAGYL*SRNCVL
Trigger: TAAAACACAGTTCCTACTGCACAAGTACCCAGCAGG...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAATAGGGCTCAAATGCTaGCTCCTCCAGGAAGTTTCC +
Preference number: 2 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGIGLKC*LLQEVS
Trigger: GGAAACTTCCTGGAGGAGGCAGCATTTGAGCCCTAT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCACTGTGTTGTCAAGTATaGTGCAGATCAGCACCAGAT +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPLCCQV*CRSAPD
Trigger: ATCTGGTGCTGATCTGCAGCATACTTGACAACACAG...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGATCCAGGAAGTTTCCCTaGATCTCTGCAAACCCTACT +
Preference number: 2 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRSRKFP*ISANPT
Trigger: AGTAGGGTTTGCAGAGATCCAGGGAAACTTCCTGGA...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAATCCTCTGCACTCTCTTaGGTTTTTAATCATAGTGTA +
Preference number: 2 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTESSALS*VFNHSV
Trigger: TACACTATGATTAAAAACCCAAGAGAGTGCAGAGGA...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGAGAAGCGCTCGCAGGTaGCAGTTTCTATTTGCAAGC +
Preference number: 2 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMRSARR*QFLFAS
Trigger: GCTTGCAAATAGAAACTGCCACCTGCGAGCGCTTCT...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACGAAGATGACCCCTTCTaGTGCTCCAGGTGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHEDDPF*CSRWLL
Trigger: CAGAAGCCACCTGGAGCACCAGAAGGGGTCATCTTC...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GCCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTGCGGCCCTCCTCCTTGAACAGCTCCAAGTACTaGTCGTTCAACTGGTCTCTT +
Preference number: 2 (lower is better)
Translates to: AFAFTLDSSISFLRPSSLNSSKY*SFNWSL
Trigger: AAGAGACCAGTTGAACGACCAGTACTTGGAGCTGTT...CAAGGAGGAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR-3UTR GCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAATAGGGCTCAAATGCTaGCTCCTCCAGGAAGTTTCC +
Preference number: 2 (lower is better)
Translates to: VELHMTQEALAGGSFYLQIGLKC*LLQEVS
Trigger: GGAAACTTCCTGGAGGAGGCAGCATTTGAGCCCTAT...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGCTTTCCCAACATGCATaGCTTGTACTCCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRLSQHA*LVLLCT
Trigger: AGTGCAGAGGAGTACAAGGCATGCATGTTGGGAAAG...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTGCTTTTGTGTTACTGTaGAAACCTGCCACCTGGTAT +
Preference number: 2 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGAFVLL*KPATWY
Trigger: ATACCAGGTGGCAGGTTTGCACAGTAACACAAAAGC...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCATGTACACATCAGCCCTaGTTAATCACATCCATTAGG +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPCTHQP*LITSIR
Trigger: CCTAATGGATGTGATTAAGCAGGGCTGATGTGTACA...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGCCCCTGCCCTCAGAGTaGCACCTGTTCTTTTGCAAT +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKPLPSE*HLFFCN
Trigger: ATTGCAAAAGAACAGGTGGCACTCTGAGGGCAGGGG...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp AATGACATACAGCCACGGCTGGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGTGCTTGGTTTCTTTGTaGACTGCTGAAATCTGGCGG +
Preference number: 2 (lower is better)
Translates to: NDIQPRLGMFRRPSLSPWCLVSL*TAEIWR
Trigger: CCGCCAGATTTCAGCAGTGCACAAAGAAACCAAGCA...CCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAGCCGTGGCTGTATGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR-3UTR CCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGCTGTATCTGCCTCCCTaGGCCACCTGCTGGGTACTT +
Preference number: 2 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVLYLPP*ATCWVL
Trigger: AAGTACCCAGCAGGTGGCCCAGGGAGGCAGATACAG...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACTCTCCTGGGGAAACCTaGTTCCTCCTGAAGCGCATA +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHSPGET*FLLKRI
Trigger: TATGCGCTTCAGGAGGAACCAGGTTTCCCCAGGAGA...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACCCTACAGAACATGACTaGGTTACCAGACTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHPTEHD*VTRLLR
Trigger: CCTCAGGAGTCTGGTAACTCAGTCATGTTCTGTAGG...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CCATCTGACGTAAAAACTGGTCCCGGGCAGCAGGGGAGGCCATGGCCTGTGAGATCAATAAATCTCTTCTaGTACTGTATTAGCTCGGCA +
Preference number: 2 (lower is better)
Translates to: PSDVKTGPGQQGRPWPVRSINLF*YCISSA
Trigger: TGCCGAGCTAATACAGTATCAGAAGAGATTTATTGA...TCTCACAGGCCATGGCCTCCCCTGCTGCCCGGGACCAGTTTTTACGTCAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR-3UTR GCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACCCTCCTTTCCCAACATaGATGCCTTGTACTCCTCTG +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHPPFPT*MPCTPL
Trigger: CAGAGGAGTACAAGGCATGCATGTTGGGAAAGGAGG...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTCCTCCTTTCCCAACATaGATGCCTTGTACTCCTCTG +
Preference number: 2 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFPPFPT*MPCTPL
Trigger: CAGAGGAGTACAAGGCATGCATGTTGGGAAAGGAGG...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGGGTGGGCCTACAAGCTaGTTAACAAGACAACGCAGA +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKGGPTS*LTRQRR
Trigger: TCTGCGTTGTCTTGTTAAGCAGCTTGTAGGCCCACC...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGACAAACTGGGAATTTaGCCTCTGTTAAAACAACCC +
Preference number: 2 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRDKLGI*PLLKQP
Trigger: GGGTTGTTTTAACAGAGGGCAAATTCCCAGTTTGTC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGAACAAAAGGTACCATaGCAGGTGAAAGGCCCAAGT +
Preference number: 2 (lower is better)
Translates to: VELHMTQEALAGGSFYLQEQKVP*QVKGPS
Trigger: ACTTGGGCCTTTCACCTGCCATGGTACCTTTTGTTC...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTGACTCACATGAACATTaGGGCAGGGGAAGGTATAAT +
Preference number: 2 (lower is better)
Translates to: CFNLALQNPHMTTAQGPADSHEH*GRGRYN
Trigger: ATTATACCTTCCCCTGCCCCAATGTTCATGTGAGTC...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTATGTTTTACACGTCTCTaGATCTTCCTCAGTGCTTAT +
Preference number: 2 (lower is better)
Translates to: LTVRSALSGRSASVTRDVCFTRL*IFLSAY
Trigger: ATAAGCACTGAGGAAGATTCAGAGACGTGTAAAACA...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTTCCTGGCTCAGACCATaGCCCATCTGCAGCGTAGCC +
Preference number: 2 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPSWLRP*PICSVA
Trigger: GGCTACGCTGCAGATGGGTCATGGTCTGAGCCAGGA...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGGTCTTCTCCAGCCTCTaGTCAAGGTTTCAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVVFSSL*SRFQEV
Trigger: GACCTCCTGAAACCTTGAGCAGAGGCTGGAGAAGAC...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGGAACAAAAGGTACCATaGCAGGTGAAAGGCCCAAGT +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKEQKVP*QVKGPS
Trigger: ACTTGGGCCTTTCACCTGCCATGGTACCTTTTGTTC...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGTCCAGGAAGTTTCCCTaGATCTCTGCAAACCCTACT +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKSRKFP*ISANPT
Trigger: AGTAGGGTTTGCAGAGATCCAGGGAAACTTCCTGGA...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGATGCAAACCTGCCACCTaGTATGTTTGCAAGATTTAT +
Preference number: 2 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRCKPAT*YVCKIY
Trigger: ATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCA...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGAAACATCCAGGTTGTTaGAATCATCACAACTGCATC +
Preference number: 2 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMKHPGC*NHHNCI
Trigger: GATGCAGTTGTGATGATTTCAACAACCTGGATGTTT...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGTGTTTTACACGTCTCTaGATCTTCCTCAGTGCTTAT +
Preference number: 2 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMCFTRL*IFLSAY
Trigger: ATAAGCACTGAGGAAGATTCAGAGACGTGTAAAACA...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACTGTCTGCAGCAAGTGTaGAATTTGAGCTCAAACTGG +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHCLQQV*NLSSNW
Trigger: CCAGTTTGAGCTCAAATTTCACACTTGCTGCAGACA...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATAAACCTGGTTCCTCCTaGAGCGCATATTTTGAAAAA +
Preference number: 2 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDKPGSS*SAYFEK
Trigger: TTTTTCAAAATATGCGCTTCAGGAGGAACCAGGTTT...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGCCTGCTGGGTACTTGTaGAGTAGGAACTGTGTTTTA +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKPAGYL*SRNCVL
Trigger: TAAAACACAGTTCCTACTGCACAAGTACCCAGCAGG...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGGCTCCATGTTTGATCTaGACTGGTCATTTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKAPCLI*TGHFQG
Trigger: TCCTTGGAAATGACCAGTGCAGATCAAACATGGAGC...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCATCTTTTGCAATTACTTaGTTCAACTTAGCCCTTCAA +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPSFAIT*FNLALQ
Trigger: TTGAAGGGCTAAGTTGAAGCAAGTAATTGCAAAAGA...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAAAATATTCAAATAACTaGCCCAACTGCTCACAAAGT +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPKYSNN*PNCSQS
Trigger: ACTTTGTGAGCAGTTGGGGCAGTTATTTGAATATTT...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATGACTCACATGAACATTaGGGCAGGGGAAGGTATAAT +
Preference number: 2 (lower is better)
Translates to: TALPPDTLLALSAGNSVYDSHEH*GRGRYN
Trigger: ATTATACCTTCCCCTGCCCCAATGTTCATGTGAGTC...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAAATTACTGGTTGCTTTaGATTCATCATGCCATACTT +
Preference number: 2 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPNYWLL*IHHAIL
Trigger: AAGTATGGCATGATGAATCCAAAGCAACCAGTAATT...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAAAACATCCAGGTTGTTaGAATCATCACAACTGCATC +
Preference number: 2 (lower is better)
Translates to: VELHMTQEALAGGSFYLQKHPGC*NHHNCI
Trigger: GATGCAGTTGTGATGATTTCAACAACCTGGATGTTT...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGAGATGTTTCCCTGACTaGAATAATTTCAAACGCAGT +
Preference number: 2 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMRCFPD*NNFKRS
Trigger: ACTGCGTTTGAAATTATTTCAGTCAGGGAAACATCT...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGCTGAATCTTCCTCAGTaGTTATTTCTCAGTGGTTGC +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKLNLPQ*LFLSGC
Trigger: GCAACCACTGAGAAATAAGCACTGAGGAAGATTCAG...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACCTGAATCTTCCTCAGTaGTTATTTCTCAGTGGTTGC +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHLNLPQ*LFLSGC
Trigger: GCAACCACTGAGAAATAAGCACTGAGGAAGATTCAG...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGGCTGAATGCCCCACTTaGTTGACATGTTTAAGCTTT +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKAECPT*LTCLSF
Trigger: AAAGCTTAAACATGTCAAGCAAGTGGGGCATTCAGC...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACGCTGAATGCCCCACTTaGTTGACATGTTTAAGCTTT +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHAECPT*LTCLSF
Trigger: AAAGCTTAAACATGTCAAGCAAGTGGGGCATTCAGC...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGTGTACACATCAGCCCTaGTTAATCACATCCATTAGG +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKCTHQP*LITSIR
Trigger: CCTAATGGATGTGATTAAGCAGGGCTGATGTGTACA...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 90 bp TTAGGAGTAGCATTGCTAGTTCAAAGAGCTTATGCATTTGCACTTTaGATAGACACCGTCCAGCTGTCCCCCATGGAGTGCCTACATGTC +
Preference number: 2 (lower is better)
Translates to: LGVALLVQRAYAFAL*IDTVQLSPMECLHV
Trigger: GACATGTAGGCACTCCATGGGGGACAGCTGGACGGTGTCTATCAAAAGTGCAAATGCATAAGCTCTTTGAACTAGCAATGCTACTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTAGGTATAATTTTTATTaGCGTGTCCTCAGCACAAGG +
Preference number: 2 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFRYNFY*RVLSTR
Trigger: CCTTGTGCTGAGGACACGTCAATAAAAATTATACCT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGTGTCTGCAGCAAGTGTaGAATTTGAGCTCAAACTGG +
Preference number: 2 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVCLQQV*NLSSNW
Trigger: CCAGTTTGAGCTCAAATTTCACACTTGCTGCAGACA...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGGTTACTGTGCAAACCTaGCACCTGGTATGTTTGCAA +
Preference number: 2 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVVTVQT*HLVCLQ
Trigger: TTGCAAACATACCAGGTGGCAGGTTTGCACAGTAAC...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATCTGCTGGCTGGCACCTaGAGGAGCTGGGAACAAAAG +
Preference number: 2 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDLLAGT*RSWEQK
Trigger: CTTTTGTTCCCAGCTCCTCCAGGTGCCAGCCAGCAG...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTATGTTTGATCTGCACTaGTCATTTCCAAGGATTAAA +
Preference number: 2 (lower is better)
Translates to: CFNLALQNPHMTTAQGPAMFDLH*SFPRIK
Trigger: TTTAATCCTTGGAAATGACCAGTGCAGATCAAACAT...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATATGTTTGATCTGCACTaGTCATTTCCAAGGATTAAA +
Preference number: 2 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDMFDLH*SFPRIK
Trigger: TTTAATCCTTGGAAATGACCAGTGCAGATCAAACAT...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACGGGAATAGAGATCTATaGACACCTCTCTATACCAAA +
Preference number: 2 (lower is better)
Translates to: EKDQERAWGILKMHRTRHGNRDL*TPLYTK
Trigger: TTTGGTATAGAGAGGTGTCCATAGATCTCTATTCCC...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGACCTTCTGGTTGTGCTaGTGGACTCAGCGGACACTG +
Preference number: 2 (lower is better)
Translates to: HLKLQGYSITYSERDPLKTFWLC*WTQRTL
Trigger: CAGTGTCCGCTGAGTCCATCAGCACAACCAGAAGGT...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGAGGTATAATTTTTATTaGCGTGTCCTCAGCACAAGG +
Preference number: 2 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVRYNFY*RVLSTR
Trigger: CCTTGTGCTGAGGACACGTCAATAAAAATTATACCT...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGAAAAGAATTACTGGTTaGTTTGGATTCATCATGCCA +
Preference number: 2 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKKRITG*FGFIMP
Trigger: TGGCATGATGAATCCAAAGCAACCAGTAATTCTTTT...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTACTCTAACAGAGATATaGTTGACAAACTGGGAATTT +
Preference number: 2 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFTLTEI*LTNWEF
Trigger: AAATTCCCAGTTTGTCAAGCATATCTCTGTTAGAGT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATTCAGTTAGCCAGGGGTaGGCCTACAAGCTGCTTAAC +
Preference number: 2 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDSVSQG*AYKLLN
Trigger: GTTAAGCAGCTTGTAGGCCCACCCCTGGCTAACTGA...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGTGGCAATCCCAACCATaGGGACAGATGATGGCATCC +
Preference number: 2 (lower is better)
Translates to: HLKLQGYSITYSERDPLKWQSQP*GQMMAS
Trigger: GGATGCCATCATCTGTCCCCATGGTTGGGATTGCCA...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGCCTACAGAACATGACTaGGTTACCAGACTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: HLKLQGYSITYSERDPLKPTEHD*VTRLLR
Trigger: CCTCAGGAGTCTGGTAACTCAGTCATGTTCTGTAGG...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCGCTCCATGTTTGATCTaGACTGGTCATTTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSAPCLI*TGHFQG
Trigger: TCCTTGGAAATGACCAGTGCAGATCAAACATGGAGC...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTATATTCTTCATAGGATaGTGGGTGTTATCCAAGCCA +
Preference number: 2 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPIFFIG*WVLSKP
Trigger: TGGCTTGGATAACACCCATCATCCTATGAAGAATAT...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp TGCTTTTCTAACAGCTCCAAGTACTGGTCGTTCAACTGGTCTCTTCTCATTTTGCTTGCGGTGCAAAATTaGTATTTCTCGATTTCTTCG +
Preference number: 2 (lower is better)
Translates to: CFSNSSKYWSFNWSLLILLAVQN*YFSISS
Trigger: CGAAGAAATCGAGAAATAGCAATTTTGCACCGCAAG...CAAAATGAGAAGAGACCAGTTGAACGACCAGTACTTGGAGCTGTTAGAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR CAA 90 bp TGTTTAAGCTTTTGTGTTACTGTGCAAACCTGCCACCTGGTATGTTaGCAAGATTTATGCAAAATGGAGCACAAACCTACAGAACATGAC +
Preference number: 2 (lower is better)
Translates to: CLSFCVTVQTCHLVC*QDLCKMEHKPTEHD
Trigger: GTCATGTTCTGTAGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAACACAAAAGCTTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGTCAGGCAACAAAAACTaGTTTATCCGTAGTAGGCCT +
Preference number: 2 (lower is better)
Translates to: HLKLQGYSITYSERDPLKSGNKN*FIRSRP
Trigger: AGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGA...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR GCA 90 bp TCATCCAGGGTATTATATAAAGTGAAGAACTGCTTGGTTTCTTTGTGCACTGCTTCATCAATCTTGCGGTaGAAAATTGCTATTTCTCGA +
Preference number: 2 (lower is better)
Translates to: SSRVLYKVKNCLVSLCTASSILR*KIAISR
Trigger: TCGAGAAATAGCAATTTTGCACCGCAAGATTGATGA...AGCAGTGCACAAAGAAACCAAGCAGTTCTTCACTTTATATAATACCCTGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR CAA 90 bp TCTGTAAAAGGCAATTCCTTTGAAAGATTCAAAACCTCTGACACCTaGTTTCATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAG +
Preference number: 2 (lower is better)
Translates to: SVKGNSFERFKTSDT*FHLKLQGYSITYSE
Trigger: CTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATGAAACAAGGTGTCAGAGGTTTTGAATCTTTCAAAGGAATTGCCTTTTACAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp AAGCAAGAAGTGGGAGGGAGCCCCCAACCCAGAGGCTaGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGC +
Preference number: 3 (lower is better)
Translates to: KQEVGGSPQPRG*RRFHSTGQPAR
Trigger: GCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGGGGCTCCCTCCCACTTCTTGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp CCCCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTaGGCAGCCTGCCCGCTAGCAACTCCCTGTGCTGAT +
Preference number: 3 (lower is better)
Translates to: PPTQRLAEIPQH*AACPLATPCAD
Trigger: ATCAGCACAGGGAGTTGCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCGAACTTTCGTTCCAGTaGCTGTCACCACCAAGCCTG +
Preference number: 3 (lower is better)
Translates to: PNPEAGGDSTALGSLPASELSFQ*LSPPSL
Trigger: CAGGCTTGGTGGTGACAGCAACTGGAACGAAAGTTC...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp AGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGCTGCTaGTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: SARRWQFLFASC*FRLAQVGLAGP
Trigger: AGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGCAAATAGAAACTGCCACCTGCGAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp CGGCTGGGGATGTTCAGGAGGCCTTCGCTTTCACCTTaGACAGCAGCATCTCGTTCTTGCGGCCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: RLGMFRRPSLSP*TAASRSCGPPP
Trigger: AGGAGGAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR TCA 72 bp CCACGGCTCAGGGACCAGCTGAGGTGGAGCTGCACATaGCCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATT +
Preference number: 3 (lower is better)
Translates to: PRLRDQLRWSCT*PKKRSQVAVSI
Trigger: AATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCACCTCAGCTGGTCCCTGAGCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp CTTCCCATGCCTGGACCCTGGACCTTCTGGTTGTGCTaGTGGACTCAGCGGACACTGGCAGGACCCAGCTAT +
Preference number: 3 (lower is better)
Translates to: LPMPGPWTFWLC*WTQRTLAGPSY
Trigger: ATAGCTGGGTCCTGCCAGTGTCCGCTGAGTCCATCAGCACAACCAGAAGGTCCAGGGTCCAGGCATGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp AGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGCTaGTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGC +
Preference number: 3 (lower is better)
Translates to: RSARRWQFLFAS*CFRLAQVGLAG
Trigger: GCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGCAAATAGAAACTGCCACCTGCGAGCGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp CAGTTGCTGTCACCACCAAGCCTGCTGGCTGGCACCTaGAGGAGCTGGGAACAAAAGGTACCATGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: QLLSPPSLLAGT*RSWEQKVPWQV
Trigger: CACCTGCCATGGTACCTTTTGTTCCCAGCTCCTCCAGGTGCCAGCCAGCAGGCTTGGTGGTGACAGCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp TGGATAGCCCAGTTCTGCGGTCAAGTGTGCTGTATCTaGCTCCCTGGGCCACCTGCTGGGTACTTGTGCAGT +
Preference number: 3 (lower is better)
Translates to: WIAQFCGQVCCI*LPGPPAGYLCS
Trigger: ACTGCACAAGTACCCAGCAGGTGGCCCAGGGAGGCAGATACAGCACACTTGACCGCAGAACTGGGCTATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp GGTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTaGCAGTTTCTATTTGCAAGCTGCTGCTTCCGCCTG +
Preference number: 3 (lower is better)
Translates to: GGAAHDPRSARR*QFLFASCCFRL
Trigger: CAGGCGGAAGCAGCAGCTTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTGACACCCTACTTGCCTaGAGTGCAGGGAACAGTGTC +
Preference number: 3 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGDTLLA*SAGNSV
Trigger: GACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTC...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCGAATTACTGGTTGCTTaGGATTCATCATGCCATACT +
Preference number: 3 (lower is better)
Translates to: PNPEAGGDSTALGSLPASELLVA*DSSCHT
Trigger: AGTATGGCATGATGAATCCAAAGCAACCAGTAATTC...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp TCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATaGCTGGACCCTGGACCTTCTGGTTGTGCTGATGGA +
Preference number: 3 (lower is better)
Translates to: SRGLGIVRECFP*LDPGPSGCADG
Trigger: TCCATCAGCACAACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp TTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATaGTTCCCATGCCTGGACCCTGGACCTTCTGGTTGT +
Preference number: 3 (lower is better)
Translates to: FRRSRGLGIVRE*FPCLDPGPSGC
Trigger: ACAACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp GTCATTCCCACCCCTCTTCCCAGAGGCAATTCAGGCTaGCGGGCTGCTAGATATCCTCCCAGAGACATCCTA +
Preference number: 3 (lower is better)
Translates to: VIPTPLPRGNSG*RAARYPPRDIL
Trigger: TAGGATGTCTCTGGGAGGATATCTAGCAGCCCGGCAGCCTGAATTGCCTCTGGGAAGAGGGGTGGGAATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCCCACCTGCTGGGTACTaGTGCAGTAGGAACTGTGTT +
Preference number: 3 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCPPAGY*CSRNCV
Trigger: AACACAGTTCCTACTGCACAAGTACCCAGCAGGTGG...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGAACTTTCGTTCCAGTaGCTGTCACCACCAAGCCTG +
Preference number: 3 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRELSFQ*LSPPSL
Trigger: CAGGCTTGGTGGTGACAGCAACTGGAACGAAAGTTC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGGACACCCTACTTGCCTaGAGTGCAGGGAACAGTGTC +
Preference number: 3 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRDTLLA*SAGNSV
Trigger: GACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTC...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTCGTGATCACGCAATCTaGTCCTGCTCACAACAGCTC +
Preference number: 3 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGRDHAI*SCSQQL
Trigger: GAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACG...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGACGTGATCACGCAATCTaGTCCTGCTCACAACAGCTC +
Preference number: 3 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRRDHAI*SCSQQL
Trigger: GAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACG...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp AAAACATCTTGGATAGCCCAGTTCTGCGGTCAAGTGTaGTGTATCTGCCTCCCTGGGCCACCTGCTGGGTAC +
Preference number: 3 (lower is better)
Translates to: KTSWIAQFCGQV*CICLPGPPAGY
Trigger: GTACCCAGCAGGTGGCCCAGGGAGGCAGATACAGCACACTTGACCGCAGAACTGGGCTATCCAAGATGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp GCTGGCACCTGGAGGAGCTGGGAACAAAAGGTACCATaGCAGGTGAAAGGCCCAAGTGACCAACACTACATG +
Preference number: 3 (lower is better)
Translates to: AGTWRSWEQKVP*QVKGPSDQHYM
Trigger: CATGTAGTGTTGGTCACTTGGGCCTTTCACCTGCCATGGTACCTTTTGTTCCCAGCTCCTCCAGGTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp CTCCCTGTGCTGATTGAGCAGGGAGCCTCTCTCTCCTaGGGAAACCTGGTTCCTCCTGAAGCGCATATTTTG +
Preference number: 3 (lower is better)
Translates to: LPVLIEQGASLS*GNLVPPEAHIL
Trigger: CAAAATATGCGCTTCAGGAGGAACCAGGTTTCCCCAGGAGAGAGAGGCTCCCTGCTCAATCAGCACAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp GAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTaGACCCTGGACCTTCTGGTTGTGCTGATGGACTCA +
Preference number: 3 (lower is better)
Translates to: EGSVLSENASHA*TLDLLVVLMDS
Trigger: TGAGTCCATCAGCACAACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCAACATGCATGCCTaGTACTCCTCTGCACTCTCT +
Preference number: 3 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGPNMHA*YSSALS
Trigger: AGAGAGTGCAGAGGAGTACAAGGCATGCATGTTGGG...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp CCTGGAGGAGCTGGGAACAAAAGGTACCATGGCAGGTaGAAGGCCCAAGTGACCAACACTACATGGGCTGAT +
Preference number: 3 (lower is better)
Translates to: PGGAGNKRYHGR*KAQVTNTTWAD
Trigger: ATCAGCCCATGTAGTGTTGGTCACTTGGGCCTTTCACCTGCCATGGTACCTTTTGTTCCCAGCTCCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp ACCCTACTGCTCTTCCTCCTGACACCCTACTTGCCTTaGGTGCAGGGAACAGTGTCTATCTCTCTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: TLLLFLLTPYLP*VQGTVSISLLA
Trigger: AGCCAGGAGAGAGATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGTAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp AAGCCTAGTCTCAGCCCTACTTCCCAGACGGGTCTCTaGAGCCTCCTGCAGAGACTAGCTTATTCCCTCCTT +
Preference number: 3 (lower is better)
Translates to: KPSLSPTSQTGL*SLLQRLAYSLL
Trigger: AAGGAGGGAATAAGCTAGTCTCTGCAGGAGGCTTCAGAGACCCGTCTGGGAAGTAGGGCTGAGACTAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp AGTGGGCAAACAAGACCATATGAGGCAGCAGAAATATaGGGGCACAGGTTAGAGCCAGGGCTCACTGTCCGG +
Preference number: 3 (lower is better)
Translates to: SGQTRPYEAAEI*GHRLEPGLTVR
Trigger: CCGGACAGTGAGCCCTGGCTCTAACCTGTGCCCTCATATTTCTGCTGCCTCATATGGTCTTGTTTGCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp CATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTaGAACATCCACGGTATTCCCTGTGTTGTCAAGTAT +
Preference number: 3 (lower is better)
Translates to: HGQAMGTDVRLA*NIHGIPCVVKY
Trigger: ATACTTGACAACACAGGGAATACCGTGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAACCCAACATGCATGCCTaGTACTCCTCTGCACTCTCT +
Preference number: 3 (lower is better)
Translates to: VELHMTQEALAGGSFYLQPNMHA*YSSALS
Trigger: AGAGAGTGCAGAGGAGTACAAGGCATGCATGTTGGG...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAGCAGGAGCTCCATGTTaGATCTGCACTGGTCATTTC +
Preference number: 3 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGAGAPC*ICTGHF
Trigger: GAAATGACCAGTGCAGATCAAACATGGAGCTCCTGC...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp CGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTaGTCGCGGCTTAAAGCAGAGCAGTCCCATGTACTC +
Preference number: 3 (lower is better)
Translates to: RDHAILSCSQQL*SRLKAEQSHVL
Trigger: GAGTACATGGGACTGCTCTGCTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp TGCCCCAACTGCTCACAAAGTTCAGTTAGCCAGGGGTaGGCCTACAAGCTGCTTAACAAGACAACGCAGATG +
Preference number: 3 (lower is better)
Translates to: CPNCSQSSVSQG*AYKLLNKTTQM
Trigger: CATCTGCGTTGTCTTGTTAAGCAGCTTGTAGGCCCACCCCTGGCTAACTGAACTTTGTGAGCAGTTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp GGACCTTCTGGTTGTGCTGATGGACTCAGCGGACACTaGCAGGACCCAGCTATCCTGAAAATATTAAGGGCT +
Preference number: 3 (lower is better)
Translates to: GPSGCADGLSGH*QDPAILKILRA
Trigger: AGCCCTTAATATTTTCAGGATAGCTGGGTCCTGCCAGTGTCCGCTGAGTCCATCAGCACAACCAGAAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp CACAGAACAAGGCACTTTCCTTGGCAATCCCAACCATaGGGACAGATGATGGCATCCATCCTATGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: HRTRHFPWQSQP*GQMMASILWGS
Trigger: AGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGAATGCCCCACTTGCTaGACATGTTTAAGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRECPTC*TCLSFC
Trigger: ACAAAAGCTTAAACATGTCAAGCAAGTGGGGCATTC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp GTTCAGGAGGCCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTGCGGCCCTCTTGCGGTGCAAAATaGCTATTTCTCGATTTCTTC +
Preference number: 3 (lower is better)
Translates to: VQEAFAFTLDSSISFLRPSCGAK*LFLDFF
Trigger: GAAGAAATCGAGAAATAGCAATTTTGCACCGCAAGA...GGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR TCA 72 bp ATCAACAAATGTCCTAGCATCTCCCCACGCACCTCGTaGTCACGCAATCTTGTCCTGCTCACAACAGCTCTG +
Preference number: 3 (lower is better)
Translates to: INKCPSISPRTS*SRNLVLLTTAL
Trigger: CAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAGATGCTAGGACATTTGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp ATTCATCATGCCATACTTTCCCCATCAGCACAGAGGTaGACTCCAGTAACCCCAGAATGTCATCTGCCTCCC +
Preference number: 3 (lower is better)
Translates to: IHHAILSPSAQR*TPVTPECHLPP
Trigger: GGGAGGCAGATGACATTCTGGGGTTACTGGAGTCCACCTCTGTGCTGATGGGGAAAGTATGGCATGATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp GGGATTCTGAAGATGCACAGAACAAGGCACTTTCCTTaGCAATCCCAACCATGGGGACAGATGATGGCATCC +
Preference number: 3 (lower is better)
Translates to: GILKMHRTRHFP*QSQPWGQMMAS
Trigger: GGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGTTCTGTGCATCTTCAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAAACTTAAGGATGTTCTaGCTTCCTTTTAACTCCGGA +
Preference number: 3 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRNLRMF*LPFNSG
Trigger: TCCGGAGTTAAAAGGAAGCAAGAACATCCTTAAGTT...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp GGCACTTTCCTTGGCAATCCCAACCATGGGGACAGATaGTGGCATCCATCCTATGGGGCTCTTTATTGTACT +
Preference number: 3 (lower is better)
Translates to: GTFLGNPNHGDR*WHPSYGALYCT
Trigger: AGTACAATAAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAAGGAAAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp CTGAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTaGACTGGTCATTTCCAAGGATTAAAATCAACCCTC +
Preference number: 3 (lower is better)
Translates to: LRTRAAGAPCLI*TGHFQGLKSTL
Trigger: GAGGGTTGATTTTAATCCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTGACATGTTTAAGCTTTaGTGTTACTGTGCAAACCTG +
Preference number: 3 (lower is better)
Translates to: CFNLALQNPHMTTAQGPADMFKL*CYCANL
Trigger: CAGGTTTGCACAGTAACACAAAAGCTTAAACATGTC...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGAATGCCCCACTTGCTaGACATGTTTAAGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: VELHMTQEALAGGSFYLQECPTC*TCLSFC
Trigger: ACAAAAGCTTAAACATGTCAAGCAAGTGGGGCATTC...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAAAAACCTCTGACACCTaGTTTCATCTCAAACTTCAA +
Preference number: 3 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRKTSDT*FHLKLQ
Trigger: TTGAAGTTTGAGATGAAACAAGGTGTCAGAGGTTTT...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp TTCACCTTGGACAGCAGCATCTCGTTCTTGCGGCCCTCCTCCTTGAACTCTTTCGGGACTTCATCAATCTaGCGGTGCAAAATTGCTATT +
Preference number: 3 (lower is better)
Translates to: FTLDSSISFLRPSSLNSFGTSSI*RCKIAI
Trigger: AATAGCAATTTTGCACCGCAAGATTGATGAAGTCCC...GAAAGAGTTCAAGGAGGAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR TCA 72 bp TTATGCAAAATGGAGCACAAACCTACAGAACATGACTaGGTTACCAGACTCCTGAGGACCAGGGCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: LCKMEHKPTEHD*VTRLLRTRAAG
Trigger: TCCTGCTGCCCTGGTCCTCAGGAGTCTGGTAACTCAGTCATGTTCTGTAGGTTTGTGCTCCATTTTGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp GTGGAACATCCACGGTATTCCCTGTGTTGTCAAGTATaGTGCAGATCAGCACCAGATTCTCCAGTTTTGCAC +
Preference number: 3 (lower is better)
Translates to: VEHPRYSLCCQV*CRSAPDSPVLH
Trigger: GTGCAAAACTGGAGAATCTGGTGCTGATCTGCAGCATACTTGACAACACAGGGAATACCGTGGATGTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp AGCTCGGCACGGCTAGGGACTTCATCAATCTTGCGGTaGAAAATTGCTATTTCTCGATTTCTTCGAGCCTGT +
Preference number: 3 (lower is better)
Translates to: SSARLGTSSILR*KIAISRFLRAC
Trigger: ACAGGCTCGAAGAAATCGAGAAATAGCAATTTTGCACCGCAAGATTGATGAAGTCCCTAGCCGTGCCGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR CCA 72 bp TGCTCTGGACTTCATGAAAAGGATCAAGAGAGGGCCTaGGGGATTCTGAAGATGCACAGAACAAGGCACTTT +
Preference number: 3 (lower is better)
Translates to: CSGLHEKDQERA*GILKMHRTRHF
Trigger: AAAGTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTCATGAAGTCCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAAAGAAAACATCCAGGTaGTTGAAATCATCACAACTG +
Preference number: 3 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGKKTSR*LKSSQL
Trigger: CAGTTGTGATGATTTCAACAACCTGGATGTTTTCTT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATAAGAAAACATCCAGGTaGTTGAAATCATCACAACTG +
Preference number: 3 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDKKTSR*LKSSQL
Trigger: CAGTTGTGATGATTTCAACAACCTGGATGTTTTCTT...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGGTGCCACCTGTTCTTTaGCAATTACTTGCTTCAACT +
Preference number: 3 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKVPPVL*QLLAST
Trigger: AGTTGAAGCAAGTAATTGCAAAAGAACAGGTGGCAC...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp GGAACAAAAGGTACCATGGCAGGTGAAAGGCCCAAGTaGCCAACACTACATGGGCTGATCATTTCAGCTAAA +
Preference number: 3 (lower is better)
Translates to: GTKGTMAGERPK*PTLHGLIISAK
Trigger: TTTAGCTGAAATGATCAGCCCATGTAGTGTTGGTCACTTGGGCCTTTCACCTGCCATGGTACCTTTTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp GCAGCAGGGGAGGCCATGGCCTGTGAGAAGTTCTCATaGATTGAGTTCAGCAGACTAATCTCTTTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: AAGEAMACEKFS*IEFSRLISFSK
Trigger: TTTGGAAAAAGAGATTAGTCTGCTGAACTCAATTCATGAGAACTTCTCACAGGCCATGGCCTCCCCTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR-3UTR CAA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATAAAACATCCAGGTTGTaGAAATCATCACAACTGCAT +
Preference number: 3 (lower is better)
Translates to: TALPPDTLLALSAGNSVYKTSRL*KSSQLH
Trigger: ATGCAGTTGTGATGATTTCAACAACCTGGATGTTTT...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACTTCTTTTGCAATTACTaGCTTCAACTTAGCCCTTCA +
Preference number: 3 (lower is better)
Translates to: EKDQERAWGILKMHRTRHFFCNY*LQLSPS
Trigger: TGAAGGGCTAAGTTGAAGCAAGTAATTGCAAAAGAA...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGAAAAAGAATTACTGGTaGCTTTGGATTCATCATGCC +
Preference number: 3 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKKKNYW*LWIHHA
Trigger: GGCATGATGAATCCAAAGCAACCAGTAATTCTTTTT...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp GAACATCCACGGTATTCCCTGTGTTGTCAAGTATGCTaGAGATCAGCACCAGATTCTCCAGTTTTGCACATT +
Preference number: 3 (lower is better)
Translates to: EHPRYSLCCQVC*RSAPDSPVLHI
Trigger: AATGTGCAAAACTGGAGAATCTGGTGCTGATCTGCAGCATACTTGACAACACAGGGAATACCGTGGATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp TCCCAACCATGGGGACAGATGATGGCATCCATCCTATaGGGCTCTTTATTGTACTGTTCTGCATTAAGATGT +
Preference number: 3 (lower is better)
Translates to: SQPWGQMMASIL*GSLLYCSALRC
Trigger: ACATCTTAATGCAGAACAGTACAATAAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGAACAAGGCACTTTCCTaGGCAATCCCAACCATGGGG +
Preference number: 3 (lower is better)
Translates to: HLKLQGYSITYSERDPLKNKALS*AIPTMG
Trigger: CCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGTT...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGACGGTATTCCCTGTGTaGTCAAGTATGCTGCAGATC +
Preference number: 3 (lower is better)
Translates to: HLKLQGYSITYSERDPLKTVFPV*SSMLQI
Trigger: GATCTGCAGCATACTTGACAACACAGGGAATACCGT...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp AACAGAGAACAAGTACTCCCTATATTCTTCATAGGATaGTGGGTGTTATCCAAGCCACGTGTTTACTGTCTG +
Preference number: 3 (lower is better)
Translates to: NREQVLPIFFIG*WVLSKPRVYCL
Trigger: CAGACAGTAAACACGTGGCTTGGATAACACCCATCATCCTATGAAGAATATAGGGAGTACTTGTTCTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp TCCACACTGAGAGTTGTCTGCAGCAAGTGTGAAATTTaGGCTCAAACTGGCTTCTGTAGTCTAATTCAAAGT +
Preference number: 3 (lower is better)
Translates to: STLRVVCSKCEI*AQTGFCSLIQS
Trigger: ACTTTGAATTAGACTACAGAAGCCAGTTTGAGCTCAAATTTCACACTTGCTGCAGACAACTCTCAGTGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp AATGAACACATTTCTGTGGCTGCTGAATGCCCCACTTaGTTGACATGTTTAAGCTTTTGTGTTACTGTGCAA +
Preference number: 3 (lower is better)
Translates to: NEHISVAAECPT*LTCLSFCVTVQ
Trigger: TTGCACAGTAACACAAAAGCTTAAACATGTCAAGCAAGTGGGGCATTCAGCAGCCACAGAAATGTGTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp TCCTTGAACTCTTTCACAGTCTTAAAGTATAGCCTCTaGTTTTCTAACAGCTCCAAGTACTGGTCGTTCAAC +
Preference number: 3 (lower is better)
Translates to: SLNSFTVLKYSL*FSNSSKYWSFN
Trigger: GTTGAACGACCAGTACTTGGAGCTGTTAGAAAAGCAGAGGCTATACTTTAAGACTGTGAAAGAGTTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR-3UTR CAA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCAAAACATCCAGGTTGTaGAAATCATCACAACTGCAT +
Preference number: 3 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSKTSRL*KSSQLH
Trigger: ATGCAGTTGTGATGATTTCAACAACCTGGATGTTTT...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR-3UTR CAA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATGACATGTTTAAGCTTTaGTGTTACTGTGCAAACCTG +
Preference number: 3 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDDMFKL*CYCANL
Trigger: CAGGTTTGCACAGTAACACAAAAGCTTAAACATGTC...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp AAGTATGCTGCAGATCAGCACCAGATTCTCCAGTTTTaGACATTTATTGAGAAGAGGGAATACTATTATAGC +
Preference number: 3 (lower is better)
Translates to: KYAADQHQILQF*TFIEKREYYYS
Trigger: GCTATAATAGTATTCCCTCTTCTCAATAAATGTGCAAAACTGGAGAATCTGGTGCTGATCTGCAGCATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp CTGGCCATAATGTATTTAACCATTCCCCTGTATTGGTaGCACTCTCCAACTTTTTGCTATTACAATGTTTCA +
Preference number: 3 (lower is better)
Translates to: LAIMYLTIPLYW*HSPTFCYYNVS
Trigger: TGAAACATTGTAATAGCAAAAAGTTGGAGAGTGCCACCAATACAGGGGAATGGTTAAATACATTATGGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CCA 72 bp AAGCTGGCCATAATGTATTTAACCATTCCCCTGTATTaGTGGCACTCTCCAACTTTTTGCTATTACAATGTT +
Preference number: 3 (lower is better)
Translates to: KLAIMYLTIPLY*WHSPTFCYYNV
Trigger: AACATTGTAATAGCAAAAAGTTGGAGAGTGCCACCAATACAGGGGAATGGTTAAATACATTATGGCCAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR TCA 72 bp AATATTAAGGGCTACGAGCTAGAACCATTAAAACCATaGACTTCGGACTCTAACAGAGATATGCTTGACAAA +
Preference number: 3 (lower is better)
Translates to: NIKGYELEPLKP*TSDSNRDMLDK
Trigger: TTTGTCAAGCATATCTCTGTTAGAGTCCGAAGTTCATGGTTTTAATGGTTCTAGCTCGTAGCCCTTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR GCA 72 bp TTGACATGTTTAAGCTTTTGTGTTACTGTGCAAACCTaGCACCTGGTATGTTTGCAAGATTTATGCAAAATG +
Preference number: 3 (lower is better)
Translates to: LTCLSFCVTVQT*HLVCLQDLCKM
Trigger: CATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAACACAAAAGCTTAAACATGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAACCCTGGGCAACCCCATaGTCCGACCGGGCTGTCGTA +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTEPWATP*SDRAVV
Trigger: TACGACAGCCCGGTCGGATCATGGGGTTGCCCAGGG...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCGGACTCAGCGGACACTaGCAGGACCCAGCTATCCTG +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASGLSGH*QDPAIL
Trigger: CAGGATAGCTGGGTCCTGCCAGTGTCCGCTGAGTCC...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAAAGGTGGAGCTGCACATaGCCCAAGAAGCGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTERWSCT*PKKRSQ
Trigger: CTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCACCT...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCACCTTCTGGTTGTGCTaGTGGACTCAGCGGACACTG +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASTFWLC*WTQRTL
Trigger: CAGTGTCCGCTGAGTCCATCAGCACAACCAGAAGGT...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCCAGCAGGGGAGGCCATaGCCTGTGAGAAGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASQQGRP*PVRSSH
Trigger: ATGAGAACTTCTCACAGGCCATGGCCTCCCCTGCTG...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCTGCTCACAACAGCTCTaGTCGCGGCTTAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASCSQQL*SRLKAE
Trigger: CTCTGCTTTAAGCCGCGATCAGAGCTGTTGTGAGCA...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCACGCTGCTCTTCAGCTaGTCGAAGCTCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASTLLFS*SKLIFL
Trigger: GAGGAAGATGAGCTTCGAGCAGCTGAAGAGCAGCGT...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCTCAGTTAGCCAGGGGTaGGCCTACAAGCTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASSVSQG*AYKLLN
Trigger: GTTAAGCAGCTTGTAGGCCCACCCCTGGCTAACTGA...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCATAAGAAGCAAGAAGTaGGAGGGAGCCCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASIRSKK*EGAPNP
Trigger: TGGGTTGGGGGCTCCCTCCCACTTCTTGCTTCTTAT...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAAGCTTGTAGGCTGGTGTaGCTTGCTCGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTEACRLV*LARSSS
Trigger: TGAAGAGCTGCGAGCAAGTCACACCAGCCTACAAGC...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAGGCTCAGGGACCAGCTaGGGTGGAGCTGCACATGAC +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPGSGTS*GGAAHD
Trigger: GTCATGTGCAGCTCCACCTCAGCTGGTCCCTGAGCC...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCACCTCCCTTTTAGGGTaGTCAGTCACCTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASTSLLG*SVTYRV
Trigger: CACTCTGTAGGTGACTGATCACCCTAAAAGGGAGGT...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATGGAGGAAGCTGTCCCTaGCGCGGAGCTGCTACCGGG +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDGGSCP*RGAATG
Trigger: CCCGGTAGCAGCTCCGCGGCAGGGACAGCTTCCTCC...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS-3UTR GCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCGCTGATAGCTCAGACTaGTTCTCTGCATACTCGGAC +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASADSSD*FSAYSD
Trigger: GTCCGAGTATGCAGAGAAGCAGTCTGAGCTATCAGC...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCGTGGCAGTTTCTATTTaGAAGCTGCTGCTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASVAVSI*KLLLPP
Trigger: AGGCGGAAGCAGCAGCTTGCAAATAGAAACTGCCAC...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCCCTTCGCTTTCACCTTaGACAGCAGCATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASPSLSP*TAASRS
Trigger: AGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGG...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 72 bp ACGGCTGGGGATGTTCAGGAGGCCTTCGCTTTCACCTaGGACAGCAGCATCTCGTTCTTGCGGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TAGDVQEAFAFT*DSSISFLRPSS
Trigger: GGAGGAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR GCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCTCCCTGCCGCGGAGCTaGTACCGGGGTGGAGTACAA +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCSLPRS*YRGGVQ
Trigger: TTGTACTCCACCCCGGTAGCAGCTCCGCGGCAGGGA...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS-3UTR GCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCTGGCCCACGGAGCTTaGGGTGAGACGGCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDLAHGA*GETALL
Trigger: GAGGAGAGCCGTCTCACCGCAAGCTCCGTGGGCCAG...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTGGCCCACGGAGCTTaGGGTGAGACGGCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMLAHGA*GETALL
Trigger: GAGGAGAGCCGTCTCACCGCAAGCTCCGTGGGCCAG...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAATGGCAATCCCAACCATaGGGACAGATGATGGCATCC +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTEWQSQP*GQMMAS
Trigger: GGATGCCATCATCTGTCCCCATGGTTGGGATTGCCA...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGATCCTGGCTCAGACCATaGCCCATCTGCAGCGTAGCC +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRSWLRP*PICSVA
Trigger: GGCTACGCTGCAGATGGGTCATGGTCTGAGCCAGGA...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCAGGTGGAGCTGCACATaGCCCAAGAAGCGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCRWSCT*PKKRSQ
Trigger: CTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCACCT...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGCACAACCCTGAGGTCTaGGGTCCCGGGCATGGCACT +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRHNPEV*GPGHGT
Trigger: AGTGCCATGCCCGGGACCTCAGACCTCAGGGTTGTG...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAAAACTTTCGTTCCAGTTaGTGTCACCACCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTENFRSS*CHHQAC
Trigger: GCAGGCTTGGTGGTGACAGCAACTGGAACGAAAGTT...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAGGGCTCCAGCTGGTGTaGGCATTTCATCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPGLQLV*AFHPWQ
Trigger: CTGCCAAGGATGAAATGCCCACACCAGCTGGAGCCC...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGATCCCCTGGATCTGGTaGGGCTCCAGCTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRIPWIW*GSSWCG
Trigger: CCCACACCAGCTGGAGCCCCACCAGATCCAGGGGAT...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTTCCATCCCCTGGATCTaGTGGGGCTCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGSIPWI*WGSSWC
Trigger: ACACCAGCTGGAGCCCCACCAGATCCAGGGGATGGA...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCCAGAGTCCCACAATCTaGCCCACGGAGCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCQSPTI*PTELAV
Trigger: CACCGCAAGCTCCGTGGGCCAGATTGTGGGACTCTG...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAACCTTCGCTTTCACCTTaGACAGCAGCATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTEPSLSP*TAASRS
Trigger: AGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGG...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATACCAAGCCTGCTGGCTaGCACCTGGAGGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDTKPAG*HLEELG
Trigger: TCCCAGCTCCTCCAGGTGCCAGCCAGCAGGCTTGGT...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTACCCCAACCCAGAGGCTaGCGGAGATTCCACAGCACT +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVPQPRG*RRFHST
Trigger: AGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGGG...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGCCACGGAGCTTGCGGTaGGACGGCTCTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLPRSLR*DGSPHL
Trigger: CAAATGAGGAGAGCCGTCTCACCGCAAGCTCCGTGG...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAAACAATCTGTTCCATCTaGCGTAAAAACTGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTETICSI*RKNWSR
Trigger: CCGGGACCAGTTTTTACGTCAGATGGAACAGATTGT...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATGAGTTACCAGACTCCTaGGGACCAGGGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDELPDS*GPGQQE
Trigger: CTCCTGCTGCCCTGGTCCTCAGGAGTCTGGTAACTC...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGATTCAAAACCCCCACATaGCCACGGCTCAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRFKTPT*PRLRDQ
Trigger: CTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAA...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTGCTCCAGGTGGCTTCTaGAATGATCAGGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGAPGGF*NDQGPW
Trigger: CCAAGGCCCCTGATCATTTCAGAAGCCACCTGGAGC...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTATCCCCACGCACCTCGTaGTCACGCAATCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVSPRTS*SRNLVL
Trigger: CAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGA...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAACACAACCCTGAGGTCTaGGGTCCCGGGCATGGCACT +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQHNPEV*GPGHGT
Trigger: AGTGCCATGCCCGGGACCTCAGACCTCAGGGTTGTG...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAACAGCACTGGGCAGCCTaGCCGCTAGCAACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQQHWAA*PLATPC
Trigger: ACAGGGAGTTGCTAGCGGGCAGGCTGCCCAGTGCTG...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATGCTCACTGTCCGGAGTaGCCTTTCAGGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDAHCPE*PFRQVC
Trigger: GCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAGC...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCACTGTCCCCCATGGAGTaGCTACATGTCACACTCCTG +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPLSPME*LHVTLL
Trigger: CAGGAGTGTGACATGTAGGCACTCCATGGGGGACAG...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATTCCATCCCCTGGATCTaGTGGGGCTCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDSIPWI*WGSSWC
Trigger: ACACCAGCTGGAGCCCCACCAGATCCAGGGGATGGA...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTCTGTATCTGCCTCCCTaGGCCACCTGCTGGGTACTT +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGLYLPP*ATCWVL
Trigger: AAGTACCCAGCAGGTGGCCCAGGGAGGCAGATACAG...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGACTGCTGGCTGGCACCTaGAGGAGCTGGGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRLLAGT*RSWEQK
Trigger: CTTTTGTTCCCAGCTCCTCCAGGTGCCAGCCAGCAG...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGGAGATTCCACAGCACTaGGCAGCCTGCCCGCTAGCA +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPREIPQH*AACPLA
Trigger: TGCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTC...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCATGGCATCCATCCTATaGGGCTCTTTATTGTACTGT +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASMASIL*GSLLYC
Trigger: ACAGTACAATAAAGAGCCCCATAGGATGGATGCCAT...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 72 bp CTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATaGTCAGAGAATGCTTCCCATGCCTGGACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LLKVSGGPEGSV*SENASHAWTLD
Trigger: GTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCATATTCTTCATAGGATaGTGGGTGTTATCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: PNPEAGGDSTALGSLPASIFFIG*WVLSKP
Trigger: TGGCTTGGATAACACCCATCATCCTATGAAGAATAT...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGAGTTACCAGACTCCTaGGGACCAGGGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQELPDS*GPGQQE
Trigger: CTCCTGCTGCCCTGGTCCTCAGGAGTCTGGTAACTC...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATGCTCCAGGTGGCTTCTaGAATGATCAGGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDAPGGF*NDQGPW
Trigger: CCAAGGCCCCTGATCATTTCAGAAGCCACCTGGAGC...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTATAGCCCTGGGAAGATaGCCCCTTCTGGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CFNLALQNPHMTTAQGPAIALGR*PLLVLQ
Trigger: CTGGAGCACCAGAAGGGGTCATCTTCCCAGGGCTAT...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAAGCAACTCCCTGTGCTaGTTGAGCAGGGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGSNSLC*LSREPL
Trigger: GAGAGGCTCCCTGCTCAATCAGCACAGGGAGTTGCT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAACCTTCTGGTTGTGCTaGTGGACTCAGCGGACACTG +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRTFWLC*WTQRTL
Trigger: CAGTGTCCGCTGAGTCCATCAGCACAACCAGAAGGT...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTCAGCACTGGGCAGCCTaGCCGCTAGCAACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFQHWAA*PLATPC
Trigger: ACAGGGAGTTGCTAGCGGGCAGGCTGCCCAGTGCTG...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCTGGTGGGGCTCCAGCTaGTGTGGGCATTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCWWGSS*CGHFIL
Trigger: AAGGATGAAATGCCCACACCAGCTGGAGCCCCACCA...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAAAACAGCTCCAAGTACTaGTCGTTCAACTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTENSSKY*SFNWSL
Trigger: AAGAGACCAGTTGAACGACCAGTACTTGGAGCTGTT...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTGTATCTGCCTCCCTaGGCCACCTGCTGGGTACTT +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMLYLPP*ATCWVL
Trigger: AAGTACCCAGCAGGTGGCCCAGGGAGGCAGATACAG...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAGGAGCCTCTCTCTCCTaGGGAAACCTGGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGGASLS*GNLVPP
Trigger: AGGAGGAACCAGGTTTCCCCAGGAGAGAGAGGCTCC...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAAATTCCCCTGTATTGGTaGCACTCTCCAACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTEIPLYW*HSPTFC
Trigger: GCAAAAAGTTGGAGAGTGCCACCAATACAGGGGAAT...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCAGCTTTTTCTGTAGCTaGCAGCCCTGCTGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCSFFCS*QPCWKC
Trigger: GCACTTCCAGCAGGGCTGTCAGCTACAGAAAAAGCT...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCATTGGTCATCAGCGACTaGATACGCTGCTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPLVISD*IRCSSA
Trigger: AGCTGAAGAGCAGCGTATTCAGTCGCTGATGACCAA...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCCGGACACAATCTGCTTaGTCTCAGCAGAGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCRTQSA*SQQSRV
Trigger: GACTCTGCTCTGCTGAGATCAAGCAGATTGTGTCCG...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAATCCCAGACGGGTCTCTaGAGCCTCCTGCAGAGACTA +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQSQTGL*SLLQRL
Trigger: TAGTCTCTGCAGGAGGCTTCAGAGACCCGTCTGGGA...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAATTCAAAACCCCCACATaGCCACGGCTCAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQFKTPT*PRLRDQ
Trigger: CTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAA...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTAGGTGGCTTCTGAAATaGTCAGGGGCCTTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: CFNLALQNPHMTTAQGPARWLLK*SGALGH
Trigger: ATGCCCCAAGGCCCCTGATCATTTCAGAAGCCACCT...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTACAACGTCACAACCCTaGGGTCTGAGGTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFTTSQP*GLRSRA
Trigger: TGCCCGGGACCTCAGACCTCAGGGTTGTGACGTTGT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCAGCCCTGCTGGAAGTaGCGTTTTCTTGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDQPCWK*RFLVLS
Trigger: GCTGAGGACAAGAAAACGGCACTTCCAGCAGGGCTG...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCACACAGCCCCTCTGCATaGTGTGACTCACATGAACAT +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPHSPSA*CDSHEH
Trigger: ATGTTCATGTGAGTCACAGCATGCAGAGGGGCTGTG...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGACCCCTGCCCTCAGAGTaGCACCTGTTCTTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRPLPSE*HLFFCN
Trigger: ATTGCAAAAGAACAGGTGGCACTCTGAGGGCAGGGG...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTGCTCACTGTCCGGAGTaGCCTTTCAGGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFAHCPE*PFRQVC
Trigger: GCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAGC...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCAGCCCTTACTTTTGTTaGGCAGGGCCACTGGACATG +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCSPYFC*AGPLDM
Trigger: CATGTCCAGTGGCCCTGCGCAACAAAAGTAAGGGCT...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGTCCTCTGCTCCCTGGTaGCGTTTGTATTTCCGACGG +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMSSAPW*RLYFRR
Trigger: CCGTCGGAAATACAAACGCCACCAGGGAGCAGAGGA...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGATCCTCTGCTCCCTGGTaGCGTTTGTATTTCCGACGG +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGSSAPW*RLYFRR
Trigger: CCGTCGGAAATACAAACGCCACCAGGGAGCAGAGGA...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACCAGAGTCCCACAATCTaGCCCACGGAGCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHQSPTI*PTELAV
Trigger: CACCGCAAGCTCCGTGGGCCAGATTGTGGGACTCTG...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTCAGGCGGCTCTCCACTaGAGAGGGTCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: CFNLALQNPHMTTAQGPAQAALH*RGSFHL
Trigger: GAGATGAAAAGACCCTCTCCAGTGGAGAGCCGCCTG...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGCAGCAGGGGAGGCCATaGCCTGTGAGAAGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRQQGRP*PVRSSH
Trigger: ATGAGAACTTCTCACAGGCCATGGCCTCCCCTGCTG...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTTCAGGAGGCCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTGCGGCCCCCTTCGCTTTCACCTTaGACAGCAGCATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: VQEAFAFTLDSSISFLRPPSLSP*TAASRS
Trigger: AGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGG...GGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGACATACAGCCACGGCTaGGGATGTTCAGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMTYSHG*GCSGGL
Trigger: AAGGCCTCCTGAACATCCCCAGCCGTGGCTGTATGT...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGACATACAGCCACGGCTaGGGATGTTCAGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRTYSHG*GCSGGL
Trigger: AAGGCCTCCTGAACATCCCCAGCCGTGGCTGTATGT...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAGGCACCTGGAGGAGCTaGGAACAAAAGGTACCATGG +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGGTWRS*EQKVPW
Trigger: CCATGGTACCTTTTGTTCCCAGCTCCTCCAGGTGCC...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGACCATCAGCACAGAGGTaGACTCCAGTAACCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRPSAQR*TPVTPE
Trigger: TTCTGGGGTTACTGGAGTCCACCTCTGTGCTGATGG...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATGGACTCAGCGGACACTaGCAGGACCCAGCTATCCTG +
Preference number: 4 (lower is better)
Translates to: TALPPDTLLALSAGNSVYGLSGH*QDPAIL
Trigger: CAGGATAGCTGGGTCCTGCCAGTGTCCGCTGAGTCC...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCGATCAAGAGAGGGCCTaGGGGATTCTGAAGATGCAC +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCDQERA*GILKMH
Trigger: GTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATC...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGATGTAAGGCTGGCGTaGAACATCCACGGTATTCCC +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRDVRLA*NIHGIP
Trigger: GGGAATACCGTGGATGTTCCACGCCAGCCTTACATC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAACTAGGCATATGCAGGTaGACATATGATATACACGTG +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTELGICR*TYDIHV
Trigger: CACGTGTATATCATATGTCCACCTGCATATGCCTAG...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAACACCCTACTTGCCTTaGGTGCAGGGAACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGTPYLP*VQGTVS
Trigger: AGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTACAGGAGCTCCATGTTTaGTCTGCACTGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVQELHV*SALVIS
Trigger: GGAAATGACCAGTGCAGATCAAACATGGAGCTCCTG...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTACCTACAGAACATGACTaGGTTACCAGACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVPTEHD*VTRLLR
Trigger: CCTCAGGAGTCTGGTAACTCAGTCATGTTCTGTAGG...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGTGCTGGCCCTGGCACTaGAACCAGTGGCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMCWPWH*NQWLFL
Trigger: TAAAAACAGCCACTGGTTTCAGTGCCAGGGCCAGCA...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGAGGCACTGTCCACACTaGGAGTTGTCTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRRHCPH*ELSAAS
Trigger: ACTTGCTGCAGACAACTCTCAGTGTGGACAGTGCCT...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGATAGCCCTGGGAAGATaGCCCCTTCTGGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKIALGR*PLLVLQ
Trigger: CTGGAGCACCAGAAGGGGTCATCTTCCCAGGGCTAT...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATTGCTCACAACAGCTCTaGTCGCGGCTTAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDCSQQL*SRLKAE
Trigger: CTCTGCTTTAAGCCGCGATCAGAGCTGTTGTGAGCA...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GGCCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTGCGGCCCTCCTCCTTAGCTCATTCTCGTCATaGGTCATTGCAGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GLRFHLGQQHLVLAALLLSSFSS*VIAEVK
Trigger: CTTGACCTCTGCAATGACTCATGACGAGAATGAGCT...AAGGAGGAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR GCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAACGGCTCTCCTCATTTaGCATAGCGGTCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRTALLI*HSGHLG
Trigger: ACCAAGATGACCGCTATGGCAAATGAGGAGAGCCGT...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCACGGCTCTCCTCATTTaGCATAGCGGTCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCTALLI*HSGHLG
Trigger: ACCAAGATGACCGCTATGGCAAATGAGGAGAGCCGT...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAACTCCTCTCGACAATGTaGTTTAAATTCCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTELLSTM*FKFLFL
Trigger: CAAGAACAGGAATTTAAAGCACATTGTCGAGAGGAG...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCATTCATCTCCACGTGGTaGTCTCTCAGCTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPFISTW*SLSFQV
Trigger: AACCTGAAAGCTGAGAGAGCACCACGTGGAGATGAA...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGCTATTTGCAAGCTGCTaGTTCCGCCTGGCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLLFASC*FRLAQV
Trigger: TACCTGAGCCAGGCGGAAGCAGCAGCTTGCAAATAG...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTTTTCTATTTGCAAGCTaGTGCTTCCGCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGFLFAS*CFRLAQ
Trigger: CTGAGCCAGGCGGAAGCAGCAGCTTGCAAATAGAAA...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAGGTATTGTCAGAGAATaGTTCCCATGCCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVGIVRE*FPCLDP
Trigger: AGGGTCCAGGCATGGGAAGCATTCTCTGACAATACC...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGGTCTTCTCCAGCCTCTaGTCAAGGTTTCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMVFSSL*SRFQEV
Trigger: GACCTCCTGAAACCTTGAGCAGAGGCTGGAGAAGAC...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGGTCTTCTCCAGCCTCTaGTCAAGGTTTCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLVFSSL*SRFQEV
Trigger: GACCTCCTGAAACCTTGAGCAGAGGCTGGAGAAGAC...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGAGCCCTTACTTTTGTTaGGCAGGGCCACTGGACATG +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRSPYFC*AGPLDM
Trigger: CATGTCCAGTGGCCCTGCGCAACAAAAGTAAGGGCT...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TGGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTCCCAAGGGGCTCAGCTaGAGGCAAAATCCAACAGAC +
Preference number: 4 (lower is better)
Translates to: WGCSGGLRFHLGQQHLVLPKGLS*RQNPTD
Trigger: GTCTGTTGGATTTTGCCTGCAGCTGAGCCCCTTGGG...AAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGAGCTGCTACCGGGGTaGAGTACAAAGCGGAAACTC +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQELLPG*STKRKL
Trigger: GAGTTTCCGCTTTGTACTCCACCCCGGTAGCAGCTC...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS-3UTR CCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGGGGCTCCAGCTGGTGTaGGCATTTCATCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKGLQLV*AFHPWQ
Trigger: CTGCCAAGGATGAAATGCCCACACCAGCTGGAGCCC...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGAGCTCCTCTGCTCCCTaGTGGCGTTTGTATTTCCGA +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMSSSAP*WRLYFR
Trigger: TCGGAAATACAAACGCCACCAGGGAGCAGAGGAGCT...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAAGCTCCTCTGCTCCCTaGTGGCGTTTGTATTTCCGA +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGSSSAP*WRLYFR
Trigger: TCGGAAATACAAACGCCACCAGGGAGCAGAGGAGCT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACCTGCTGGCTGGCACCTaGAGGAGCTGGGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHLLAGT*RSWEQK
Trigger: CTTTTGTTCCCAGCTCCTCCAGGTGCCAGCCAGCAG...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGACCAAGCCTGCTGGCTaGCACCTGGAGGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVTKPAG*HLEELG
Trigger: TCCCAGCTCCTCCAGGTGCCAGCCAGCAGGCTTGGT...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAAGAAGCGCTCGCAGGTaGCAGTTTCTATTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRRSARR*QFLFAS
Trigger: GCTTGCAAATAGAAACTGCCACCTGCGAGCGCTTCT...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCATCAGCACAGAGGTaGACTCCAGTAACCCCAGAA +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGPSAQR*TPVTPE
Trigger: TTCTGGGGTTACTGGAGTCCACCTCTGTGCTGATGG...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGAAGATGACCCCTTCTaGTGCTCCAGGTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQEDDPF*CSRWLL
Trigger: CAGAAGCCACCTGGAGCACCAGAAGGGGTCATCTTC...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATGGAGCCTCTCTCTCCTaGGGAAACCTGGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TALPPDTLLALSAGNSVYGASLS*GNLVPP
Trigger: AGGAGGAACCAGGTTTCCCCAGGAGAGAGAGGCTCC...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATATAAGAAGCAAGAAGTaGGAGGGAGCCCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDIRSKK*EGAPNP
Trigger: TGGGTTGGGGGCTCCCTCCCACTTCTTGCTTCTTAT...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGTGGCAATCCCAACCATaGGGACAGATGATGGCATCC +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMWQSQP*GQMMAS
Trigger: GGATGCCATCATCTGTCCCCATGGTTGGGATTGCCA...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATGATCAAGAGAGGGCCTaGGGGATTCTGAAGATGCAC +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDDQERA*GILKMH
Trigger: GTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATC...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 72 bp AACCCTACTGCTCTTCCTCCTGACACCCTACTTGCCTaGAGTGCAGGGAACAGTGTCTATCTCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NPTALPPDTLLA*SAGNSVYLSPG
Trigger: GCCAGGAGAGAGATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGTAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp ATACAGCCACGGCTGGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGACAGCAACAATCTGTTCCATCTaGCGTAAAAACTGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: IQPRLGMFRRPSLSPWTATICSI*RKNWSR
Trigger: CCGGGACCAGTTTTTACGTCAGATGGAACAGATTGT...TGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAGCCGTGGCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR TCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGCAGGAGCTCCATGTTTaGTCTGCACTGGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLQELHV*SALVIS
Trigger: GGAAATGACCAGTGCAGATCAAACATGGAGCTCCTG...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGGGGCATGGCACTTTGTaGGGTAGTAAAAGGACTGTC +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRGHGTL*GSKRTV
Trigger: GACAGTCCTTTTACTACCTCACAAAGTGCCATGCCC...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTACCTCCCTTTTAGGGTaGTCAGTCACCTACAGAGTG +
Preference number: 4 (lower is better)
Translates to: CFNLALQNPHMTTAQGPATSLLG*SVTYRV
Trigger: CACTCTGTAGGTGACTGATCACCCTAAAAGGGAGGT...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATCAGCCCTGCTGGAAGTaGCGTTTTCTTGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TALPPDTLLALSAGNSVYQPCWK*RFLVLS
Trigger: GCTGAGGACAAGAAAACGGCACTTCCAGCAGGGCTG...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGGCTGATAGCTCAGACTaGTTCTCTGCATACTCGGAC +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMADSSD*FSAYSD
Trigger: GTCCGAGTATGCAGAGAAGCAGTCTGAGCTATCAGC...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTTTCTCGAGGGCTGCTTaGTCTTTGTCCAGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGFSRAA*SLSSFS
Trigger: TGAGAAACTGGACAAAGAGCAAGCAGCCCTCGAGAA...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCATATCTTCTCGAGGGCTaGTTGCTCTTTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPYLLEG*LLFVQF
Trigger: AAACTGGACAAAGAGCAAGCAGCCCTCGAGAAGATA...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCTTCATCTCCACGTGGTaGTCTCTCAGCTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCFISTW*SLSFQV
Trigger: AACCTGAAAGCTGAGAGAGCACCACGTGGAGATGAA...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCTGCTTGGTTTCTTTGTaGACTGCTGAAATCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCCLVSL*TAEIWR
Trigger: CCGCCAGATTTCAGCAGTGCACAAAGAAACCAAGCA...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTATAGGGCTCAAATGCTaGCTCCTCCAGGAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: CFNLALQNPHMTTAQGPAIGLKC*LLQEVS
Trigger: GGAAACTTCCTGGAGGAGGCAGCATTTGAGCCCTAT...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGCCTCCTTTCCCAACATaGATGCCTTGTACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLPPFPT*MPCTPL
Trigger: CAGAGGAGTACAAGGCATGCATGTTGGGAAAGGAGG...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGTTTCTATTTGCAAGCTaGTGCTTCCGCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLFLFAS*CFRLAQ
Trigger: CTGAGCCAGGCGGAAGCAGCAGCTTGCAAATAGAAA...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGGGTATTGTCAGAGAATaGTTCCCATGCCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLGIVRE*FPCLDP
Trigger: AGGGTCCAGGCATGGGAAGCATTCTCTGACAATACC...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTCTGTCCCCCATGGAGTaGCTACATGTCACACTCCTG +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFLSPME*LHVTLL
Trigger: CAGGAGTGTGACATGTAGGCACTCCATGGGGGACAG...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGAACAAAAGGTACCATaGCAGGTGAAAGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLREQKVP*QVKGPS
Trigger: ACTTGGGCCTTTCACCTGCCATGGTACCTTTTGTTC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGAATGATCAGGGGCCTTaGGGCATCTCCTTACCCTAT +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRNDQGP*GISLPY
Trigger: ATAGGGTAAGGAGATGCCCCAAGGCCCCTGATCATT...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGAATGATCAGGGGCCTTaGGGCATCTCCTTACCCTAT +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMNDQGP*GISLPY
Trigger: ATAGGGTAAGGAGATGCCCCAAGGCCCCTGATCATT...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATGAAGATGACCCCTTCTaGTGCTCCAGGTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TALPPDTLLALSAGNSVYEDDPF*CSRWLL
Trigger: CAGAAGCCACCTGGAGCACCAGAAGGGGTCATCTTC...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAATCTCCTGGGGAAACCTaGTTCCTCCTGAAGCGCATA +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQSPGET*FLLKRI
Trigger: TATGCGCTTCAGGAGGAACCAGGTTTCCCCAGGAGA...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTTCACTAGAGACGTACTaGGGCCTGACAACATCAACA +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGSLETY*GLTTST
Trigger: TGTTGATGTTGTCAGGCCCCAGTACGTCTCTAGTGA...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAACTTCTTGGTTCACATaGCTGAGACATTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPTSWFT*LRHFCP
Trigger: TGGGCAGAAATGTCTCAGCCATGTGAACCAAGAAGT...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGTCTAGGTCTTCGTCATaGGTCATTGCAGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLSRSSS*VIAEVK
Trigger: CTTGACCTCTGCAATGACTCATGACGAAGACCTAGA...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGTCTAGGTCTTCGTCATaGGTCATTGCAGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRSRSSS*VIAEVK
Trigger: CTTGACCTCTGCAATGACTCATGACGAAGACCTAGA...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATACAATCTGTTCCATCTaGCGTAAAAACTGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDTICSI*RKNWSR
Trigger: CCGGGACCAGTTTTTACGTCAGATGGAACAGATTGT...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTTGCTGGCCCTGGCACTaGAACCAGTGGCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFCWPWH*NQWLFL
Trigger: TAAAAACAGCCACTGGTTTCAGTGCCAGGGCCAGCA...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCATCAGGCAACAAAAACTaGTTTATCCGTAGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPSGNKN*FIRSRP
Trigger: AGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGA...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACGAGGCAGCAGAAATATaGGGGCACAGGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHEAAEI*GHRLEP
Trigger: TGGCTCTAACCTGTGCCCTCATATTTCTGCTGCCTC...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGGAGGCAGCAGAAATATaGGGGCACAGGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKEAAEI*GHRLEP
Trigger: TGGCTCTAACCTGTGCCCTCATATTTCTGCTGCCTC...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATAACCATGGGGACAGATaGTGGCATCCATCCTATGGG +
Preference number: 4 (lower is better)
Translates to: TALPPDTLLALSAGNSVYNHGDR*WHPSYG
Trigger: CCCATAGGATGGATGCCATCATCTGTCCCCATGGTT...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGTACTCGGACACAATCTaGTTGATCTCAGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMYSDTI*LISAEQ
Trigger: CTGCTCTGCTGAGATCAAGCAGATTGTGTCCGAGTA...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCTCAGACTGCTTCTCTaGATACTCGGACACAATCTG +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDLRLLL*ILGHNL
Trigger: CAGATTGTGTCCGAGTATGCAGAGAAGCAGTCTGAG...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATTTCTCGAGGGCTGCTTaGTCTTTGTCCAGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDFSRAA*SLSSFS
Trigger: TGAGAAACTGGACAAAGAGCAAGCAGCCCTCGAGAA...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATTTCGTCATGAGTCATTaGAGAGGTCAAGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDFVMSH*RGQGTR
Trigger: CCTGGTACCTTGACCTCTGCAATGACTCATGACGAA...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGACCTGCTGGGTACTTGTaGAGTAGGAACTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRPAGYL*SRNCVL
Trigger: TAAAACACAGTTCCTACTGCACAAGTACCCAGCAGG...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGCCTACTTGCCTTGAGTaGAGGGAACAGTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRPTCLE*REQCLS
Trigger: AGATAGACACTGTTCCCTGCACTCAAGGCAAGTAGG...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACTTTCCCAACATGCATaGCTTGTACTCCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGLSQHA*LVLLCT
Trigger: AGTGCAGAGGAGTACAAGGCATGCATGTTGGGAAAG...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCGTTACTGTGCAAACCTaGCACCTGGTATGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCVTVQT*HLVCLQ
Trigger: TTGCAAACATACCAGGTGGCAGGTTTGCACAGTAAC...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACCTATTTGCAAGCTGCTaGTTCCGCCTGGCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHLFASC*FRLAQV
Trigger: TACCTGAGCCAGGCGGAAGCAGCAGCTTGCAAATAG...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTAGAGAATGCTTCCCATaGCTGGACCCTGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFRECFP*LDPGPS
Trigger: AGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTTTCCGGCGATGTAGCTaGGAGGTTCCTAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGFRRCS*EVPNFS
Trigger: AGAAAAATTAGGAACCTCCCAGCTACATCGCCGGAA...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTATCTGGCTTGTAGGCTaGTGTGACTTGCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFIWLVG*CDLLAA
Trigger: AGCTGCGAGCAAGTCACACCAGCCTACAAGCCAGAT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGCTTTTCATCTCCACGTaGTGCTCTCTCAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRLFIST*CSLSFQ
Trigger: CTGAAAGCTGAGAGAGCACCACGTGGAGATGAAAAG...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CCACAATCTGTTCCATCTGACGTAAAAACTGGTCCCGGGCAGCAGGGGAGGCCAAACAGCTCCAAGTACTaGTCGTTCAACTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PQSVPSDVKTGPGQQGRPNSSKY*SFNWSL
Trigger: AAGAGACCAGTTGAACGACCAGTACTTGGAGCTGTT...TGGCCTCCCCTGCTGCCCGGGACCAGTTTTTACGTCAGATGGAACAGATTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCGACTCACATGAACATTaGGGCAGGGGAAGGTATAAT +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCDSHEH*GRGRYN
Trigger: ATTATACCTTCCCCTGCCCCAATGTTCATGTGAGTC...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACAATGCTTCCCATGCCTaGACCCTGGACCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHNASHA*TLDLLV
Trigger: AACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATT...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGTGTGGTCCCACTTCTTaGTTCACATGGCTGAGACAT +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMCGPTS*FTWLRH
Trigger: ATGTCTCAGCCATGTGAACCAAGAAGTGGGACCACA...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATCACAGCCTTGCACTGTaGTCCCACTTCTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: TALPPDTLLALSAGNSVYHSLAL*SHFLVH
Trigger: GTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTG...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGGGTCCACAACTGTCTTaGTGGCCTTTTCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMGPQLS*WPFLFS
Trigger: AGAGAAAAGAAAAGGCCATCAAGACAGTTGTGGACC...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATGTTTGTTCAAGGAAATaGCTTTCCGGCGATGTAGCT +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDVCSRK*LSGDVA
Trigger: AGCTACATCGCCGGAAAGTCATTTCCTTGAACAAAC...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGGCTTGTAGGCTGGTGTaGCTTGCTCGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVACRLV*LARSSS
Trigger: TGAAGAGCTGCGAGCAAGTCACACCAGCCTACAAGC...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAAGGTATAATTTTTATTaGCGTGTCCTCAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPRYNFY*RVLSTR
Trigger: CCTTGTGCTGAGGACACGTCAATAAAAATTATACCT...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCGGCTCAGGGACCAGCTaGGGTGGAGCTGCACATGAC +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSGSGTS*GGAAHD
Trigger: GTCATGTGCAGCTCCACCTCAGCTGGTCCCTGAGCC...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTTCAGGCAACAAAAACTaGTTTATCCGTAGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGSGNKN*FIRSRP
Trigger: AGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGA...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCAAAACCTGGTTCCTCCTaGAGCGCATATTTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPKPGSS*SAYFEK
Trigger: TTTTTCAAAATATGCGCTTCAGGAGGAACCAGGTTT...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTGGGCATGGCACTTTGTaGGGTAGTAAAAGGACTGTC +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFGHGTL*GSKRTV
Trigger: GACAGTCCTTTTACTACCTCACAAAGTGCCATGCCC...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGGGCCAACACCAGCCATaGGTAAATCATAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMGQHQP*VNHKVL
Trigger: AAGCACTTTATGATTTACTCATGGCTGGTGTTGGCC...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCCTGCTGGGTACTTGTaGAGTAGGAACTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDPAGYL*SRNCVL
Trigger: TAAAACACAGTTCCTACTGCACAAGTACCCAGCAGG...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGCACAGCCCCTCTGCATaGTGTGACTCACATGAACAT +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKHSPSA*CDSHEH
Trigger: ATGTTCATGTGAGTCACAGCATGCAGAGGGGCTGTG...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAACTTTCCCAACATGCATaGCTTGTACTCCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQLSQHA*LVLLCT
Trigger: AGTGCAGAGGAGTACAAGGCATGCATGTTGGGAAAG...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCGCTGAATGCCCCACTTaGTTGACATGTTTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCAECPT*LTCLSF
Trigger: AAAGCTTAAACATGTCAAGCAAGTGGGGCATTCAGC...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTAATAACTGCCCCAACTaGTCACAAAGTTCAGTTAGC +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGNNCPN*SQSSVS
Trigger: GCTAACTGAACTTTGTGAGCAGTTGGGGCAGTTATT...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGATGTTGTCAAGTATGCTaGAGATCAGCACCAGATTCT +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRCCQVC*RSAPDS
Trigger: AGAATCTGGTGCTGATCTGCAGCATACTTGACAACA...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATTGGGCATTTCATCCTTaGCAGGACCGAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDWAFHP*QDRDNF
Trigger: AAAATTGTCTCGGTCCTGCCAAGGATGAAATGCCCA...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCATCCCCTGGATCTGGTaGGGCTCCAGCTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSIPWIW*GSSWCG
Trigger: CCCACACCAGCTGGAGCCCCACCAGATCCAGGGGAT...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGAGCTCATCTTCCTCGTaGGCATCAGCTTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLSSSSS*ASAFSV
Trigger: TACAGAAAAAGCTGATGCCCACGAGGAAGATGAGCT...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGCAGGCGGCTCTCCACTaGAGAGGGTCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVQAALH*RGSFHL
Trigger: GAGATGAAAAGACCCTCTCCAGTGGAGAGCCGCCTG...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACAGAAGCGCTCGCAGGTaGCAGTTTCTATTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHRSARR*QFLFAS
Trigger: GCTTGCAAATAGAAACTGCCACCTGCGAGCGCTTCT...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTACAAGGCACTTTCCTTaGCAATCCCAACCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFTRHFP*QSQPWG
Trigger: TCCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATACAAGGCACTTTCCTTaGCAATCCCAACCATGGGGA +
Preference number: 4 (lower is better)
Translates to: TALPPDTLLALSAGNSVYTRHFP*QSQPWG
Trigger: TCCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGT...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTTTCTCCATTTTGCTCTaGCGGCTAAATCCATATCTC +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGFSILL*RLNPYL
Trigger: GAGATATGGATTTAGCCGCCAGAGCAAAATGGAGAA...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376300.7
CDS-3UTR CCA 90 bp CTGGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTCCAACAGACTTCACTaGAAGAGTGCTGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LGMFRRPSLSPWTAASRSSNRLH*KSAEAH
Trigger: ATGAGCTTCAGCACTCTTCCAGTGAAGTCTGTTGGA...AGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
3UTR CAA 72 bp GGGGATTCTGAAGATGCACAGAACAAGGCACTTTCCTaGGCAATCCCAACCATGGGGACAGATGATGGCATC +
Preference number: 4 (lower is better)
Translates to: GDSEDAQNKALS*AIPTMGTDDGI
Trigger: GATGCCATCATCTGTCCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGTTCTGTGCATCTTCAGAATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGCCCTGGGCAACCCCATaGTCCGACCGGGCTGTCGTA +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKPWATP*SDRAVV
Trigger: TACGACAGCCCGGTCGGATCATGGGGTTGCCCAGGG...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCATCAATAAATCTCTTCTaGTACTGTATTAGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPSINLF*YCISSA
Trigger: TGCCGAGCTAATACAGTATCAGAAGAGATTTATTGA...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GGCCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTGCGGCCCTCCTCCTTTCAATAAATCTCTTCTaGTACTGTATTAGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: GLRFHLGQQHLVLAALLLSINLF*YCISSA
Trigger: TGCCGAGCTAATACAGTATCAGAAGAGATTTATTGA...AAGGAGGAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR TCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTATATTCTTCATAGGATaGTGGGTGTTATCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGIFFIG*WVLSKP
Trigger: TGGCTTGGATAACACCCATCATCCTATGAAGAATAT...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGATGTTTTACACGTCTCTaGATCTTCCTCAGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRCFTRL*IFLSAY
Trigger: ATAAGCACTGAGGAAGATTCAGAGACGTGTAAAACA...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAAGGTATAATTTTTATTaGCGTGTCCTCAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRRYNFY*RVLSTR
Trigger: CCTTGTGCTGAGGACACGTCAATAAAAATTATACCT...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGAGCAAGTGTGAAATTTaGGCTCAAACTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMSKCEI*AQTGFC
Trigger: ACAGAAGCCAGTTTGAGCTCAAATTTCACACTTGCT...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTAGCAAGTGTGAAATTTaGGCTCAAACTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CFNLALQNPHMTTAQGPASKCEI*AQTGFC
Trigger: ACAGAAGCCAGTTTGAGCTCAAATTTCACACTTGCT...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAAAACCTGGTTCCTCCTaGAGCGCATATTTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRKPGSS*SAYFEK
Trigger: TTTTTCAAAATATGCGCTTCAGGAGGAACCAGGTTT...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGCTTGGTTCACATGGCTaGGACATTTCTGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKLGSHG*DISAHQ
Trigger: TTGATGGGCAGAAATGTCTCAGCCATGTGAACCAAG...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAACAAAAGGTGTACATTaGAAAGTCATTCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGTKGVH*KVIPTP
Trigger: AGGGGTGGGAATGACTTTTCAATGTACACCTTTTGT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGCTCAGACTGCTTCTCTaGATACTCGGACACAATCTG +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKLRLLL*ILGHNL
Trigger: CAGATTGTGTCCGAGTATGCAGAGAAGCAGTCTGAG...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTCTCCTCTCGACAATGTaGTTTAAATTCCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGLLSTM*FKFLFL
Trigger: CAAGAACAGGAATTTAAAGCACATTGTCGAGAGGAG...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTCTTGCGGTGCAAAATTaGTATTTCTCGATTTCTTCG +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGLAVQN*YFSISS
Trigger: CGAAGAAATCGAGAAATAGCAATTTTGCACCGCAAG...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTCTGAATCTTCCTCAGTaGTTATTTCTCAGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: CFNLALQNPHMTTAQGPALNLPQ*LFLSGC
Trigger: GCAACCACTGAGAAATAAGCACTGAGGAAGATTCAG...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGCCTACTTGCCTTGAGTaGAGGGAACAGTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKPTCLE*REQCLS
Trigger: AGATAGACACTGTTCCCTGCACTCAAGGCAAGTAGG...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGATGTACACATCAGCCCTaGTTAATCACATCCATTAGG +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGCTHQP*LITSIR
Trigger: CCTAATGGATGTGATTAAGCAGGGCTGATGTGTACA...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTGACAAACTGGGAATTTaGCCTCTGTTAAAACAACCC +
Preference number: 4 (lower is better)
Translates to: CFNLALQNPHMTTAQGPADKLGI*PLLKQP
Trigger: GGGTTGTTTTAACAGAGGGCAAATTCCCAGTTTGTC...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGTGTTGTCAAGTATGCTaGAGATCAGCACCAGATTCT +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLCCQVC*RSAPDS
Trigger: AGAATCTGGTGCTGATCTGCAGCATACTTGACAACA...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTATCAGATTTTCATTCATaGCTACAAGTGCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVSDFHS*LQVLSG
Trigger: ACCTGAGAGCACTTGTAGCCATGAATGAAAATCTGA...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCTCAGATTTTCATTCATaGCTACAAGTGCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCSDFHS*LQVLSG
Trigger: ACCTGAGAGCACTTGTAGCCATGAATGAAAATCTGA...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATCTTTTCATCTCCACGTaGTGCTCTCTCAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TALPPDTLLALSAGNSVYLFIST*CSLSFQ
Trigger: CTGAAAGCTGAGAGAGCACCACGTGGAGATGAAAAG...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGATACTGGTCGTTCAACTaGTCTCTTCTCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRYWSFN*SLLILF
Trigger: GAACAAAATGAGAAGAGACCAGTTGAACGACCAGTA...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp ATACAGCCACGGCTGGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGACAGCATACTGGTCGTTCAACTaGTCTCTTCTCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: IQPRLGMFRRPSLSPWTAYWSFN*SLLILF
Trigger: GAACAAAATGAGAAGAGACCAGTTGAACGACCAGTA...TGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAGCCGTGGCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCTGCAAACCTGCCACCTaGTATGTTTGCAAGATTTAT +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCCKPAT*YVCKIY
Trigger: ATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCA...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGTCAGTTAGCCAGGGGTaGGCCTACAAGCTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVSVSQG*AYKLLN
Trigger: GTTAAGCAGCTTGTAGGCCCACCCCTGGCTAACTGA...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTCCCCAACCCAGAGGCTaGCGGAGATTCCACAGCACT +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPPQPRG*RRFHST
Trigger: AGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGGG...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGAATGCTTCCCATGCCTaGACCCTGGACCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVNASHA*TLDLLV
Trigger: AACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATT...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTTCACTAGAGACGTACTaGGGCCTGACAACATCAACA +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFSLETY*GLTTST
Trigger: TGTTGATGTTGTCAGGCCCCAGTACGTCTCTAGTGA...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGTGTGGTCCCACTTCTTaGTTCACATGGCTGAGACAT +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKCGPTS*FTWLRH
Trigger: ATGTCTCAGCCATGTGAACCAAGAAGTGGGACCACA...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGCTAGGCATATGCAGGTaGACATATGATATACACGTG +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLLGICR*TYDIHV
Trigger: CACGTGTATATCATATGTCCACCTGCATATGCCTAG...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGCAAAGTTGCAAGTGGTaGTACACCAAGTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKQSCKW*YTKSFL
Trigger: GAGGAATGACTTGGTGTATCACCACTTGCAACTTTG...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGACAACAGGAAATATGTaGATAAAATCCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMTTGNM*IKSIPW
Trigger: CCAGGGGATGGATTTTATTCACATATTTCCTGTTGT...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGTTGGTCATCAGCGACTaGATACGCTGCTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVLVISD*IRCSSA
Trigger: AGCTGAAGAGCAGCGTATTCAGTCGCTGATGACCAA...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACGTTTGTTCAAGGAAATaGCTTTCCGGCGATGTAGCT +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHVCSRK*LSGDVA
Trigger: AGCTACATCGCCGGAAAGTCATTTCCTTGAACAAAC...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTTCAATAAATCTCTTCTaGTACTGTATTAGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGSINLF*YCISSA
Trigger: TGCCGAGCTAATACAGTATCAGAAGAGATTTATTGA...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGTGTGAGAAGTTCTCATaGATTGAGTTCAGCAGACTA +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMCEKFS*IEFSRL
Trigger: TAGTCTGCTGAACTCAATTCATGAGAACTTCTCACA...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGAAACATCCAGGTTGTTaGAATCATCACAACTGCATC +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLKHPGC*NHHNCI
Trigger: GATGCAGTTGTGATGATTTCAACAACCTGGATGTTT...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTAGATGTTTCCCTGACTaGAATAATTTCAAACGCAGT +
Preference number: 4 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGRCFPD*NNFKRS
Trigger: ACTGCGTTTGAAATTATTTCAGTCAGGGAAACATCT...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTGGCCAACACCAGCCATaGGTAAATCATAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFGQHQP*VNHKVL
Trigger: AAGCACTTTATGATTTACTCATGGCTGGTGTTGGCC...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGTTCATGACACATTTTaGGCCAAAACATACCTTATC +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRVHDTF*AKTYLI
Trigger: GATAAGGTATGTTTTGGCTCAAAATGTGTCATGAAC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTATTACCTTTAGGTTCATaGCACATTTTGAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVLPLGS*HILSQN
Trigger: GTTTTGGCTCAAAATGTGTCATGAACCTAAAGGTAA...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGATTACCTTTAGGTTCATaGCACATTTTGAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRLPLGS*HILSQN
Trigger: GTTTTGGCTCAAAATGTGTCATGAACCTAAAGGTAA...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AATGACATACAGCCACGGCTGGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGCTCCTCTCGACAATGTaGTTTAAATTCCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: NDIQPRLGMFRRPSLSPWLLSTM*FKFLFL
Trigger: CAAGAACAGGAATTTAAAGCACATTGTCGAGAGGAG...CCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAGCCGTGGCTGTATGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR GCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAAGGTTTTCAATTTCTTaGTGTAGTCGTGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGRFSIS*CSRVIS
Trigger: GGAGATGACACGACTACAGCAAGAAATTGAAAACCT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACGTTACTGTGCAAACCTaGCACCTGGTATGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHVTVQT*HLVCLQ
Trigger: TTGCAAACATACCAGGTGGCAGGTTTGCACAGTAAC...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATGCTTTTGTGTTACTGTaGAAACCTGCCACCTGGTAT +
Preference number: 4 (lower is better)
Translates to: TALPPDTLLALSAGNSVYAFVLL*KPATWY
Trigger: ATACCAGGTGGCAGGTTTGCACAGTAACACAAAAGC...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGGCTTTTGTGTTACTGTaGAAACCTGCCACCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKAFVLL*KPATWY
Trigger: ATACCAGGTGGCAGGTTTGCACAGTAACACAAAAGC...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGAGTGTTCTTCCTCAATaGATGTTTCAACATCTGCAC +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLSVLPQ*MFQHLH
Trigger: GTGCAGATGTTGAAACATGCATTGAGGAAGAACACT...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTCTGTGTTGTCAAGTATaGTGCAGATCAGCACCAGAT +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFLCCQV*CRSAPD
Trigger: ATCTGGTGCTGATCTGCAGCATACTTGACAACACAG...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGTGGGCATTTCATCCTTaGCAGGACCGAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKWAFHP*QDRDNF
Trigger: AAAATTGTCTCGGTCCTGCCAAGGATGAAATGCCCA...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCTCCAAAAGTGTAGCATaGATTCGAGATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCSKSVA*IRDSSS
Trigger: TGATGAAGAATCTCGAATCCATGCTACACTTTTGGA...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGGCTCTTCAAGATGTTTaGTCTTTTGCGCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRALQDV*SFAQSV
Trigger: AACAGATTGCGCAAAAGACCAAACATCTTGAAGAGC...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGTGGCTTCATTATATCTaGCTTGTAGGCTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKWLHYI*LVGWCD
Trigger: GTCACACCAGCCTACAAGCCAGATATAATGAAGCCA...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAATACTTGGATCAGCTTTaGATTCTATCTTCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQYLDQL*ILSSRG
Trigger: CCCTCGAGAAGATAGAATCCAAAGCTGATCCAAGTA...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GGGACTTCATCAATCTTGCGGTGCAAAATTGCTATTTCTCGATTTCTTCGAGCCCAGCAGGGGAGGCCATaGCCTGTGAGAAGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GTSSILRCKIAISRFLRAQQGRP*PVRSSH
Trigger: ATGAGAACTTCTCACAGGCCATGGCCTCCCCTGCTG...GGCTCGAAGAAATCGAGAAATAGCAATTTTGCACCGCAAGATTGATGAAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATTACTGGTCGTTCAACTaGTCTCTTCTCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDYWSFN*SLLILF
Trigger: GAACAAAATGAGAAGAGACCAGTTGAACGACCAGTA...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGGGGAATAGAGATCTATaGACACCTCTCTATACCAAA +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLGNRDL*TPLYTK
Trigger: TTTGGTATAGAGAGGTGTCCATAGATCTCTATTCCC...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTACTTCTTGGTTCACATaGCTGAGACATTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFTSWFT*LRHFCP
Trigger: TGGGCAGAAATGTCTCAGCCATGTGAACCAAGAAGT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGACCATTCCCCTGTATTaGTGGCACTCTCCAACTTTT +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKTIPLY*WHSPTF
Trigger: AAAAGTTGGAGAGTGCCACCAATACAGGGGAATGGT...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 72 bp AGACTCCTGAGGACCAGGGCAGCAGGAGCTCCATGTTaGATCTGCACTGGTCATTTCCAAGGATTAAAATCA +
Preference number: 4 (lower is better)
Translates to: RLLRTRAAGAPC*ICTGHFQGLKS
Trigger: TGATTTTAATCCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTCAGGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 72 bp GCATTGCTAGTTCAAAGAGCTTATGCATTTGCACTTTaGATAGACACCGTCCAGCTGTCCCCCATGGAGTGC +
Preference number: 4 (lower is better)
Translates to: ALLVQRAYAFAL*IDTVQLSPMEC
Trigger: GCACTCCATGGGGGACAGCTGGACGGTGTCTATCAAAAGTGCAAATGCATAAGCTCTTTGAACTAGCAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGCCACGGAGCTTGCGGTaGGACGGCTCTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKPRSLR*DGSPHL
Trigger: CAAATGAGGAGAGCCGTCTCACCGCAAGCTCCGTGG...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATTCCTGGCTCAGACCATaGCCCATCTGCAGCGTAGCC +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDSWLRP*PICSVA
Trigger: GGCTACGCTGCAGATGGGTCATGGTCTGAGCCAGGA...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGACAACGTCACAACCCTaGGGTCTGAGGTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKTTSQP*GLRSRA
Trigger: TGCCCGGGACCTCAGACCTCAGGGTTGTGACGTTGT...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATAGATGTTTGGTCTTTTaGGCAATCTGTTTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDRCLVF*AICLFK
Trigger: CTTGAACAAACAGATTGCGCAAAAGACCAAACATCT...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGTCATCAATCTTGCGGTaGAAAATTGCTATTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLSSILR*KIAISR
Trigger: TCGAGAAATAGCAATTTTGCACCGCAAGATTGATGA...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTGGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTCATCAATCTTGCGGTaGAAAATTGCTATTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LGMFRRPSLSPWTAASRSSSILR*KIAISR
Trigger: TCGAGAAATAGCAATTTTGCACCGCAAGATTGATGA...AGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTCTGAATCTTCCTCAGTaGTTATTTCTCAGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFLNLPQ*LFLSGC
Trigger: GCAACCACTGAGAAATAAGCACTGAGGAAGATTCAG...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTATCTTTTGCAATTACTTaGTTCAACTTAGCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVSFAIT*FNLALQ
Trigger: TTGAAGGGCTAAGTTGAAGCAAGTAATTGCAAAAGA...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAAAAAGAATTACTGGTTaGTTTGGATTCATCATGCCA +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVKRITG*FGFIMP
Trigger: TGGCATGATGAATCCAAAGCAACCAGTAATTCTTTT...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAACTCTAACAGAGATATaGTTGACAAACTGGGAATTT +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVTLTEI*LTNWEF
Trigger: AAATTCCCAGTTTGTCAAGCATATCTCTGTTAGAGT...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTCAGATTCTCCAGTTTTaGACATTTATTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CFNLALQNPHMTTAQGPAQILQF*TFIEKR
Trigger: CCTCTTCTCAATAAATGTGCAAAACTGGAGAATCTG...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGAAGAGCTTATGCATTTaGACTTTTGATAGACACCGT +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLKSLCI*TFDRHR
Trigger: ACGGTGTCTATCAAAAGTGCAAATGCATAAGCTCTT...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCTGGTGGGGCTCCAGCTaGTGTGGGCATTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSWWGSS*CGHFIL
Trigger: AAGGATGAAATGCCCACACCAGCTGGAGCCCCACCA...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGTCCAAAAGTGTAGCATaGATTCGAGATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMSKSVA*IRDSSS
Trigger: TGATGAAGAATCTCGAATCCATGCTACACTTTTGGA...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACTTCTCCATTTTGCTCTaGCGGCTAAATCCATATCTG +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHFSILL*RLNPYL
Trigger: CAGATATGGATTTAGCCGCCAGAGCAAAATGGAGAA...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS-3UTR CCA 90 bp TGGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTTCAGATTTTCATTCATaGCTACAAGTGCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: WGCSGGLRFHLGQQHLVLSDFHS*LQVLSG
Trigger: ACCTGAGAGCACTTGTAGCCATGAATGAAAATCTGA...AAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CCA 90 bp TGCTTTTCTAACAGCTCCAAGTACTGGTCGTTCAACTGGTCTCTTCTCATTTTGCAGGCGGCTCTCCACTaGAGAGGGTCTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: CFSNSSKYWSFNWSLLILQAALH*RGSFHL
Trigger: GAGATGAAAAGACCCTCTCCAGTGGAGAGCCGCCTG...CAAAATGAGAAGAGACCAGTTGAACGACCAGTACTTGGAGCTGTTAGAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CCA 90 bp CGGCTAGGGACTTCATCAATCTTGCGGTGCAAAATTGCTATTTCTCGATTTCTTACATACAGCCACGGCTaGGGATGTTCAGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RLGTSSILRCKIAISRFLTYSHG*GCSGGL
Trigger: AAGGCCTCCTGAACATCCCCAGCCGTGGCTGTATGT...AAGAAATCGAGAAATAGCAATTTTGCACCGCAAGATTGATGAAGTCCCTAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGTCCAGGAAGTTTCCCTaGATCTCTGCAAACCCTACT +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVSRKFP*ISANPT
Trigger: AGTAGGGTTTGCAGAGATCCAGGGAAACTTCCTGGA...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGTCCTCTGCACTCTCTTaGGTTTTTAATCATAGTGTA +
Preference number: 4 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLSSALS*VFNHSV
Trigger: TACACTATGATTAAAAACCCAAGAGAGTGCAGAGGA...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGATCCTCTGCACTCTCTTaGGTTTTTAATCATAGTGTA +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGSSALS*VFNHSV
Trigger: TACACTATGATTAAAAACCCAAGAGAGTGCAGAGGA...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCTCCCTACCACCTTTaGACAAATATTCAAATAACT +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGPPYHL*TNIQIT
Trigger: AGTTATTTGAATATTTGTCCAAAGGTGGTAGGGAGG...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAAATTACTGGTTGCTTTaGATTCATCATGCCATACTT +
Preference number: 4 (lower is better)
Translates to: LTVRSALSGRSASVTRDVNYWLL*IHHAIL
Trigger: AAGTATGGCATGATGAATCCAAAGCAACCAGTAATT...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATGAGATTCCACAGCACTaGGCAGCCTGCCCGCTAGCA +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDEIPQH*AACPLA
Trigger: TGCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTC...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCAGCTTTTTCTGTAGCTaGCAGCCCTGCTGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSSFFCS*QPCWKC
Trigger: GCACTTCCAGCAGGGCTGTCAGCTACAGAAAAAGCT...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACTGTGAGAAGTTCTCATaGATTGAGTTCAGCAGACTA +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHCEKFS*IEFSRL
Trigger: TAGTCTGCTGAACTCAATTCATGAGAACTTCTCACA...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTAGGCACTGTCCACACTaGGAGTTGTCTGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPRHCPH*ELSAAS
Trigger: ACTTGCTGCAGACAACTCTCAGTGTGGACAGTGCCT...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATAGCAACTCCCTGTGCTaGTTGAGCAGGGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDSNSLC*LSREPL
Trigger: GAGAGGCTCCCTGCTCAATCAGCACAGGGAGTTGCT...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGTCCCCACGCACCTCGTaGTCACGCAATCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKSPRTS*SRNLVL
Trigger: CAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGA...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGCAGTATAACATACTCTaGGAGAGACCCTCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKQYNIL*ERPSKV
Trigger: AACTTTAGAGGGTCTCTCTCAGAGTATGTTATACTG...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGTTCATGACACATTTTaGGCCAAAACATACCTTATC +
Preference number: 4 (lower is better)
Translates to: VELHMTQEALAGGSFYLQVHDTF*AKTYLI
Trigger: GATAAGGTATGTTTTGGCTCAAAATGTGTCATGAAC...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGTATCTTCTCGAGGGCTaGTTGCTCTTTGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVYLLEG*LLFVQF
Trigger: AAACTGGACAAAGAGCAAGCAGCCCTCGAGAAGATA...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGTCTTTTGCAATTACTTaGTTCAACTTAGCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMSFAIT*FNLALQ
Trigger: TTGAAGGGCTAAGTTGAAGCAAGTAATTGCAAAAGA...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTAAATATTCAAATAACTaGCCCAACTGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: CFNLALQNPHMTTAQGPAKYSNN*PNCSQS
Trigger: ACTTTGTGAGCAGTTGGGGCAGTTATTTGAATATTT...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAAAATATTCAAATAACTaGCCCAACTGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGKYSNN*PNCSQS
Trigger: ACTTTGTGAGCAGTTGGGGCAGTTATTTGAATATTT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATAGTGTTCTTCCTCAATaGATGTTTCAACATCTGCAC +
Preference number: 4 (lower is better)
Translates to: TALPPDTLLALSAGNSVYSVLPQ*MFQHLH
Trigger: GTGCAGATGTTGAAACATGCATTGAGGAAGAACACT...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTGACATCCTAGGCATATaGAGGTGGACATATGATATA +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFDILGI*RWTYDI
Trigger: TATATCATATGTCCACCTGCATATGCCTAGGATGTC...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGGACATCCTAGGCATATaGAGGTGGACATATGATATA +
Preference number: 4 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKDILGI*RWTYDI
Trigger: TATATCATATGTCCACCTGCATATGCCTAGGATGTC...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGTTCCGGCGATGTAGCTaGGAGGTTCCTAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVFRRCS*EVPNFS
Trigger: AGAAAAATTAGGAACCTCCCAGCTACATCGCCGGAA...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTATCTGGCTTGTAGGCTaGTGTGACTTGCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPIWLVG*CDLLAA
Trigger: AGCTGCGAGCAAGTCACACCAGCCTACAAGCCAGAT...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACCTGTCAGCGTTTTCTTaGCTTCATTATATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHLSAFS*LHYIWL
Trigger: AAGCCAGATATAATGAAGCCAAGAAAACGCTGACAG...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTCTGTCAGCGTTTTCTTaGCTTCATTATATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFLSAFS*LHYIWL
Trigger: AAGCCAGATATAATGAAGCCAAGAAAACGCTGACAG...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGAACAGCTCCAAGTACTaGTCGTTCAACTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVNSSKY*SFNWSL
Trigger: AAGAGACCAGTTGAACGACCAGTACTTGGAGCTGTT...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACTGCAAACCTGCCACCTaGTATGTTTGCAAGATTTAT +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHCKPAT*YVCKIY
Trigger: ATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCA...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCTCTCCTGGGGAAACCTaGTTCCTCCTGAAGCGCATA +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSSPGET*FLLKRI
Trigger: TATGCGCTTCAGGAGGAACCAGGTTTCCCCAGGAGA...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTCACAGCCTTGCACTGTaGTCCCACTTCTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPHSLAL*SHFLVH
Trigger: GTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTG...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGATTCCCCTGTATTGGTaGCACTCTCCAACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVIPLYW*HSPTFC
Trigger: GCAAAAAGTTGGAGAGTGCCACCAATACAGGGGAAT...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGACCATTCCCCTGTATTaGTGGCACTCTCCAACTTTT +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVTIPLY*WHSPTF
Trigger: AAAAGTTGGAGAGTGCCACCAATACAGGGGAATGGT...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTCCTACAGAACATGACTaGGTTACCAGACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPPTEHD*VTRLLR
Trigger: CCTCAGGAGTCTGGTAACTCAGTCATGTTCTGTAGG...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGAGGTGGCTTCTGAAATaGTCAGGGGCCTTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKRWLLK*SGALGH
Trigger: ATGCCCCAAGGCCCCTGATCATTTCAGAAGCCACCT...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTAAGATTCAAAACCTCTaGCACCTTGTTTCATCTCAA +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFKIQNL*HLVSSQ
Trigger: TTGAGATGAAACAAGGTGTCAGAGGTTTTGAATCTT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACAGATGTTTGGTCTTTTaGGCAATCTGTTTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: EKDQERAWGILKMHRTRHRCLVF*AICLFK
Trigger: CTTGAACAAACAGATTGCGCAAAAGACCAAACATCT...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GGGACTTCATCAATCTTGCGGTGCAAAATTGCTATTTCTCGATTTCTTCGAGCCTTCATCTCCACGTGGTaGTCTCTCAGCTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: GTSSILRCKIAISRFLRAFISTW*SLSFQV
Trigger: AACCTGAAAGCTGAGAGAGCACCACGTGGAGATGAA...GGCTCGAAGAAATCGAGAAATAGCAATTTTGCACCGCAAGATTGATGAAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTTCATCAATCTTGCGGTaGAAAATTGCTATTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFSSILR*KIAISR
Trigger: TCGAGAAATAGCAATTTTGCACCGCAAGATTGATGA...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCAACTTTCGTTCCAGTTaGTGTCACCACCAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSNFRSS*CHHQAC
Trigger: GCAGGCTTGGTGGTGACAGCAACTGGAACGAAAGTT...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGCGGACACAATCTGCTTaGTCTCAGCAGAGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKRTQSA*SQQSRV
Trigger: GACTCTGCTCTGCTGAGATCAAGCAGATTGTGTCCG...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTCTTGGTTCACATGGCTaGGACATTTCTGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPLGSHG*DISAHQ
Trigger: TTGATGGGCAGAAATGTCTCAGCCATGTGAACCAAG...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCTACTCGGACACAATCTaGTTGATCTCAGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSYSDTI*LISAEQ
Trigger: CTGCTCTGCTGAGATCAAGCAGATTGTGTCCGAGTA...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CGGCTAGGGACTTCATCAATCTTGCGGTGCAAAATTGCTATTTCTCGATTTCTTTGCTTGGTTTCTTTGTaGACTGCTGAAATCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RLGTSSILRCKIAISRFLCLVSL*TAEIWR
Trigger: CCGCCAGATTTCAGCAGTGCACAAAGAAACCAAGCA...AAGAAATCGAGAAATAGCAATTTTGCACCGCAAGATTGATGAAGTCCCTAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR GCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATAGAGAATGCTTCCCATaGCTGGACCCTGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDRECFP*LDPGPS
Trigger: AGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCT...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTATAGAGATGCAAAGTTaGAATGTGGAAAAGCCATTT +
Preference number: 4 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFIEMQS*NVEKPF
Trigger: AAATGGCTTTTCCACATTGCAACTTTGCATCTCTAT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CGGTGCAAAATTGCTATTTCTCGATTTCTTCGAGCCTGTAGTAAACGTATCTTGCTCGTCATGAGTCATTaGAGAGGTCAAGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: RCKIAISRFLRACSKRILLVMSH*RGQGTR
Trigger: CCTGGTACCTTGACCTCTGCAATGACTCATGACGAG...CAAGATACGTTTACTACAGGCTCGAAGAAATCGAGAAATAGCAATTTTGCACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTTCCAGGAAGTTTCCCTaGATCTCTGCAAACCCTACT +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPSRKFP*ISANPT
Trigger: AGTAGGGTTTGCAGAGATCCAGGGAAACTTCCTGGA...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 72 bp GAACACATTTCTGTGGCTGCTGAATGCCCCACTTGCTaGACATGTTTAAGCTTTTGTGTTACTGTGCAAACC +
Preference number: 4 (lower is better)
Translates to: EHISVAAECPTC*TCLSFCVTVQT
Trigger: GGTTTGCACAGTAACACAAAAGCTTAAACATGTCAAGCAAGTGGGGCATTCAGCAGCCACAGAAATGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCGGTCCACAACTGTCTTaGTGGCCTTTTCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSGPQLS*WPFLFS
Trigger: AGAGAAAAGAAAAGGCCATCAAGACAGTTGTGGACC...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGCACGTGTTTACTGTCTaGCTCCATCAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKHVFTV*LHQQQP
Trigger: TGGCTGCTGTTGATGGAGTCAGACAGTAAACACGTG...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTGCAAACAAGACCATATaGGGCAGCAGAAATATGAGG +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPANKTI*GSRNMR
Trigger: CCTCATATTTCTGCTGCCTCATATGGTCTTGTTTGC...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATATAGGGCTCAAATGCTaGCTCCTCCAGGAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDIGLKC*LLQEVS
Trigger: GGAAACTTCCTGGAGGAGGCAGCATTTGAGCCCTAT...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTGCTCCATGTTTGATCTaGACTGGTCATTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPAPCLI*TGHFQG
Trigger: TCCTTGGAAATGACCAGTGCAGATCAAACATGGAGC...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATGTGGCAGTTTCTATTTaGAAGCTGCTGCTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDVAVSI*KLLLPP
Trigger: AGGCGGAAGCAGCAGCTTGCAAATAGAAACTGCCAC...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATGGTGGGCCTACAAGCTaGTTAACAAGACAACGCAGA +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDGGPTS*LTRQRR
Trigger: TCTGCGTTGTCTTGTTAAGCAGCTTGTAGGCCCACC...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCAGCTCATCTTCCTCGTaGGCATCAGCTTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSSSSSS*ASAFSV
Trigger: TACAGAAAAAGCTGATGCCCACGAGGAAGATGAGCT...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp ATCTTGCGGTGCAAAATTGCTATTTCTCGATTTCTTCGAGCCTGTAGTAAACGTCTTTTCATCTCCACGTaGTGCTCTCTCAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ILRCKIAISRFLRACSKRLFIST*CSLSFQ
Trigger: CTGAAAGCTGAGAGAGCACCACGTGGAGATGAAAAG...ACGTTTACTACAGGCTCGAAGAAATCGAGAAATAGCAATTTTGCACCGCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR TCA 90 bp GGGACTTCATCAATCTTGCGGTGCAAAATTGCTATTTCTCGATTTCTTCGAGCCTGTGAGAAGTTCTCATaGATTGAGTTCAGCAGACTA +
Preference number: 4 (lower is better)
Translates to: GTSSILRCKIAISRFLRACEKFS*IEFSRL
Trigger: TAGTCTGCTGAACTCAATTCATGAGAACTTCTCACA...GGCTCGAAGAAATCGAGAAATAGCAATTTTGCACCGCAAGATTGATGAAGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR GCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGTTCGTCATGAGTCATTaGAGAGGTCAAGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKFVMSH*RGQGTR
Trigger: CCTGGTACCTTGACCTCTGCAATGACTCATGACGAA...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATTGCTTGGTTTCTTTGTaGACTGCTGAAATCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDCLVSL*TAEIWR
Trigger: CCGCCAGATTTCAGCAGTGCACAAAGAAACCAAGCA...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGACTCTAACAGAGATATaGTTGACAAACTGGGAATTT +
Preference number: 4 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVTLTEI*LTNWEF
Trigger: AAATTCCCAGTTTGTCAAGCATATCTCTGTTAGAGT...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCTACTTGGATCAGCTTTaGATTCTATCTTCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSYLDQL*ILSSRG
Trigger: CCCTCGAGAAGATAGAATCCAAAGCTGATCCAAGTA...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGGAACAAAAGGTACCATaGCAGGTGAAAGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKEQKVP*QVKGPS
Trigger: ACTTGGGCCTTTCACCTGCCATGGTACCTTTTGTTC...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATCAAAGTTGCAAGTGGTaGTACACCAAGTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDQSCKW*YTKSFL
Trigger: GAGGAATGACTTGGTGTATCACCACTTGCAACTTTG...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATTGTCTGCAGCAAGTGTaGAATTTGAGCTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDCLQQV*NLSSNW
Trigger: CCAGTTTGAGCTCAAATTTCACACTTGCTGCAGACA...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGTGTCTGCAGCAAGTGTaGAATTTGAGCTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKCLQQV*NLSSNW
Trigger: CCAGTTTGAGCTCAAATTTCACACTTGCTGCAGACA...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGGCAAACAAGACCATATaGGGCAGCAGAAATATGAGG +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKANKTI*GSRNMR
Trigger: CCTCATATTTCTGCTGCCTCATATGGTCTTGTTTGC...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTCTTGCGGTGCAAAATTaGTATTTCTCGATTTCTTCG +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPLAVQN*YFSISS
Trigger: CGAAGAAATCGAGAAATAGCAATTTTGCACCGCAAG...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGGCTCCATGTTTGATCTaGACTGGTCATTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKAPCLI*TGHFQG
Trigger: TCCTTGGAAATGACCAGTGCAGATCAAACATGGAGC...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGCTGTGTTGTCAAGTATaGTGCAGATCAGCACCAGAT +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKLCCQV*CRSAPD
Trigger: ATCTGGTGCTGATCTGCAGCATACTTGACAACACAG...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGTGGCTTCATTATATCTaGCTTGTAGGCTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKWLHYI*LVGWCD
Trigger: GTCACACCAGCCTACAAGCCAGATATAATGAAGCCA...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCGGGAATAGAGATCTATaGACACCTCTCTATACCAAA +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSGNRDL*TPLYTK
Trigger: TTTGGTATAGAGAGGTGTCCATAGATCTCTATTCCC...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CGGTGCAAAATTGCTATTTCTCGATTTCTTCGAGCCTGTAGTAAACGTATCTTGCTTGCGGTGCAAAATTaGTATTTCTCGATTTCTTCG +
Preference number: 4 (lower is better)
Translates to: RCKIAISRFLRACSKRILLAVQN*YFSISS
Trigger: CGAAGAAATCGAGAAATAGCAATTTTGCACCGCAAG...CAAGATACGTTTACTACAGGCTCGAAGAAATCGAGAAATAGCAATTTTGCACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR GCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGAATAACTGCCCCAACTaGTCACAAAGTTCAGTTAGC +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKNNCPN*SQSSVS
Trigger: GCTAACTGAACTTTGTGAGCAGTTGGGGCAGTTATT...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTCAGATTCTCCAGTTTTaGACATTTATTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPQILQF*TFIEKR
Trigger: CCTCTTCTCAATAAATGTGCAAAACTGGAGAATCTG...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGATGGCATCCATCCTATaGGGCTCTTTATTGTACTGT +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKMASIL*GSLLYC
Trigger: ACAGTACAATAAAGAGCCCCATAGGATGGATGCCAT...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 72 bp TTTTGTGTTACTGTGCAAACCTGCCACCTGGTATGTTaGCAAGATTTATGCAAAATGGAGCACAAACCTACA +
Preference number: 4 (lower is better)
Translates to: FCVTVQTCHLVC*QDLCKMEHKPT
Trigger: TGTAGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAACACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGTGTTTTACACGTCTCTaGATCTTCCTCAGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKCFTRL*IFLSAY
Trigger: ATAAGCACTGAGGAAGATTCAGAGACGTGTAAAACA...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGCAGTATAACATACTCTaGGAGAGACCCTCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: HLKLQGYSITYSERDPLKQYNIL*ERPSKV
Trigger: AACTTTAGAGGGTCTCTCTCAGAGTATGTTATACTG...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATAGGTTTTCAATTTCTTaGTGTAGTCGTGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDRFSIS*CSRVIS
Trigger: GGAGATGACACGACTACAGCAAGAAATTGAAAACCT...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTAAAAGAATTACTGGTTaGTTTGGATTCATCATGCCA +
Preference number: 4 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPKRITG*FGFIMP
Trigger: TGGCATGATGAATCCAAAGCAACCAGTAATTCTTTT...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCATAGAGATGCAAAGTTaGAATGTGGAAAAGCCATTT +
Preference number: 4 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSIEMQS*NVEKPF
Trigger: AAATGGCTTTTCCACATTGCAACTTTGCATCTCTAT...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATGCTCTTCAAGATGTTTaGTCTTTTGCGCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDALQDV*SFAQSV
Trigger: AACAGATTGCGCAAAAGACCAAACATCTTGAAGAGC...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 72 bp GTACCTTGTACACAGGTACAATTCTTAGGAGTAGCATaGCTAGTTCAAAGAGCTTATGCATTTGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: VPCTQVQFLGVA*LVQRAYAFALL
Trigger: CAAAAGTGCAAATGCATAAGCTCTTTGAACTAGCAATGCTACTCCTAAGAATTGTACCTGTGTACAAGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR TCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATAAGATTCAAAACCTCTaGCACCTTGTTTCATCTCAA +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDKIQNL*HLVSSQ
Trigger: TTGAGATGAAACAAGGTGTCAGAGGTTTTGAATCTT...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR GCA 90 bp AGGGTATTATATAAAGTGAAGAACTGCTTGGTTTCTTTGTGCACTGCTGAAATCAGGTTTTCAATTTCTTaGTGTAGTCGTGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: RVLYKVKNCLVSLCTAEIRFSIS*CSRVIS
Trigger: GGAGATGACACGACTACAGCAAGAAATTGAAAACCT...GATTTCAGCAGTGCACAAAGAAACCAAGCAGTTCTTCACTTTATATAATACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR GCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATAAGAGCTTATGCATTTaGACTTTTGATAGACACCGT +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDKSLCI*TFDRHR
Trigger: ACGGTGTCTATCAAAAGTGCAAATGCATAAGCTCTT...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CCA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATCCTCCCTACCACCTTTaGACAAATATTCAAATAACT +
Preference number: 4 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDPPYHL*TNIQIT
Trigger: AGTTATTTGAATATTTGTCCAAAGGTGGTAGGGAGG...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
3UTR CAA 72 bp GGCAATTCCTTTGAAAGATTCAAAACCTCTGACACCTaGTTTCATCTCAAACTTCAAGGTTACAGTATAACA +
Preference number: 4 (lower is better)
Translates to: GNSFERFKTSDT*FHLKLQGYSIT
Trigger: TGTTATACTGTAACCTTGAAGTTTGAGATGAAACAAGGTGTCAGAGGTTTTGAATCTTTCAAAGGAATTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS TCA 90 bp CCACCTCCGGGAGACCCTGGCCCTCCGGCCCCCTGGGCAACCCCATaGTCCGACCGGGCTGTCGTAAGGCGAGAGCGAAGCCCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: PPPGDPGPPAPWATP*SDRAVVRRERSPPS
Trigger: GCTTGGCGGGCTTCGCTCTCGCCTTACGACAGCCCGGTCGGATCATGGGGTTGCCCAGGGGGCCGGAGGGCCAGGGTCTCCCGGAGGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS CCA 90 bp AAGCGTCCGGAGGAAGCTGTCCCTGCCGCGGAGCTGCTACCGGGGTaGAGTACAAAGCGGAAACTCCCTCTGCCGCCGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: KRPEEAVPAAELLPG*STKRKLPLPPPPPP
Trigger: CGGCGGCGGCGGCGGCGGCAGAGGGAGTTTCCGCTTTGTACTCCACCCCGGTAGCAGCTCCGCGGCAGGGACAGCTTCCTCCGGACGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS GCA 90 bp CGAAGCCCGCCAAGCGTCCGGAGGAAGCTGTCCCTGCCGCGGAGCTaGTACCGGGGTGGAGTACAAAGCGGAAACTCCCTCTGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RSPPSVRRKLSLPRS*YRGGVQSGNSLCRR
Trigger: GCGGCGGCAGAGGGAGTTTCCGCTTTGTACTCCACCCCGGTAGCAGCTCCGCGGCAGGGACAGCTTCCTCCGGACGCTTGGCGGGCTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS-3UTR CAA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCCTTCTCGAGGGCTGCTaGCTCTTTGTCCAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PNPEAGGDSTALGSLPASLLEGC*LFVQFL
Trigger: GAGAAACTGGACAAAGAGCAAGCAGCCCTCGAGAAG...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GCAAGCTGCTGCTTCCGCCTGGCTCAGGTAGGCCTTGCTGGCCCTGGCACTGAAAGCAGCATCTCGTTCTaGCGGCCCTCCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: ASCCFRLAQVGLAGPGTESSISF*RPSSLN
Trigger: GTTCAAGGAGGAGGGCCGCAAGAACGAGATGCTGCT...TTCAGTGCCAGGGCCAGCAAGGCCTACCTGAGCCAGGCGGAAGCAGCAGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCCCCAACATGCATGCCTaGTACTCCTCTGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: PNPEAGGDSTALGSLPASPNMHA*YSSALS
Trigger: AGAGAGTGCAGAGGAGTACAAGGCATGCATGTTGGG...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGCTCCCTGGTGGCGTTaGTATTTCCGACGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRAPWWR*YFRRGL
Trigger: CAAGCCCCGTCGGAAATACAAACGCCACCAGGGAGC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCGGGACTTCATCAATCTaGCGGTGCAAAATTGCTATT +
Preference number: 5 (lower is better)
Translates to: PNPEAGGDSTALGSLPASGTSSI*RCKIAI
Trigger: AATAGCAATTTTGCACCGCAAGATTGATGAAGTCCC...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp ATACAGCCACGGCTGGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGACAGCAAGCAGCATCTCGTTCTaGCGGCCCTCCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: IQPRLGMFRRPSLSPWTASSISF*RPSSLN
Trigger: GTTCAAGGAGGAGGGCCGCAAGAACGAGATGCTGCT...TGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAGCCGTGGCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CAA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCACTTCTCGAGGGCTGCTaGCTCTTTGTCCAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPLLEGC*LFVQFL
Trigger: GAGAAACTGGACAAAGAGCAAGCAGCCCTCGAGAAG...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGCCTTCGCTTTCACCTaGGACAGCAGCATCTCGTTC +
Preference number: 5 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRAFAFT*DSSISF
Trigger: GAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCGACATGTTTAAGCTTTaGTGTTACTGTGCAAACCTG +
Preference number: 5 (lower is better)
Translates to: PNPEAGGDSTALGSLPASDMFKL*CYCANL
Trigger: CAGGTTTGCACAGTAACACAAAAGCTTAAACATGTC...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CCCAACCCAGAGGCTGGCGGAGATTCCACAGCACTGGGCAGCCTGCCCGCTAGCCTATGGGGCTCTTTATaGTACTGTTCTGCATTAAGA +
Preference number: 5 (lower is better)
Translates to: PNPEAGGDSTALGSLPASLWGSL*YCSALR
Trigger: TCTTAATGCAGAACAGTACAATAAAGAGCCCCATAG...GCTAGCGGGCAGGCTGCCCAGTGCTGTGGAATCTCCGCCAGCCTCTGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS CCA 90 bp TCGGACACAATCTGCTTGATCTCAGCAGAGCAGAGTCCCACAATCTaGCCCACGGAGCTTGCGGTGAGACGGCTCTCCTCATTTGCCATA +
Preference number: 5 (lower is better)
Translates to: SDTICLISAEQSPTI*PTELAVRRLSSFAI
Trigger: TATGGCAAATGAGGAGAGCCGTCTCACCGCAAGCTCCGTGGGCCAGATTGTGGGACTCTGCTCTGCTGAGATCAAGCAGATTGTGTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS-3UTR CAA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTATATTTCCGACGGGGCTaGTACACTTCTGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LTVRSALSGRSASVTRDVYFRRG*YTSERS
Trigger: GGACCTCTCAGAAGTGTACAAGCCCCGTCGGAAATA...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CACTGGACATGGGCAGGCAATGGGGACGGATGTAAGGCTGGCGTGGAACATCCACTTCGTCATGAGTCATaGCAGAGGTCAAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: HWTWAGNGDGCKAGVEHPLRHES*QRSRYQ
Trigger: CTGGTACCTTGACCTCTGCAATGACTCATGACGAAG...TGGATGTTCCACGCCAGCCTTACATCCGTCCCCATTGCCTGCCCATGTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp AGCCTCTGCTCAAGGTTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGGGTGGCAGTTTCTATTaGCAAGCTGCTGCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: SLCSRFQEVPRARYCQRMGGSFY*QAAASA
Trigger: GGCGGAAGCAGCAGCTTGCAAATAGAAACTGCCACC...CATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAACCTTGAGCAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGGACAAGCCCTTACTTTaGTTGCGCAGGGCCACTGGA +
Preference number: 5 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLDKPLL*LRRATG
Trigger: TCCAGTGGCCCTGCGCAACAAAAGTAAGGGCTTGTC...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAGTTCTTCATCTTCTCTaGTTTCCACCTCCGGGAGAC +
Preference number: 5 (lower is better)
Translates to: LTVRSALSGRSASVTRDVVLHLL*FPPPGD
Trigger: GTCTCCCGGAGGTGGAAACAAGAGAAGATGAAGAAC...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGAGTTCTTCATCTTCTCTaGTTTCCACCTCCGGGAGAC +
Preference number: 5 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRVLHLL*FPPPGD
Trigger: GTCTCCCGGAGGTGGAAACAAGAGAAGATGAAGAAC...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGGTAGGCTGGTGTGACTaGCTCGCAGCTCTTCAAGAT +
Preference number: 5 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRVGWCD*LAALQD
Trigger: ATCTTGAAGAGCTGCGAGCAAGTCACACCAGCCTAC...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGACTTCGTCATGAGTCATaGCAGAGGTCAAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRLRHES*QRSRYQ
Trigger: CTGGTACCTTGACCTCTGCAATGACTCATGACGAAG...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CCATCTGACGTAAAAACTGGTCCCGGGCAGCAGGGGAGGCCATGGCCTGTGAGAAACTGCTTGGTTTCTTaGTGCACTGCTGAAATCTGG +
Preference number: 5 (lower is better)
Translates to: PSDVKTGPGQQGRPWPVRNCLVS*CTAEIW
Trigger: CCAGATTTCAGCAGTGCACAAAGAAACCAAGCAGTT...TCTCACAGGCCATGGCCTCCCCTGCTGCCCGGGACCAGTTTTTACGTCAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CAA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCACCTGCTGGGTACTaGTGCAGTAGGAACTGTGTT +
Preference number: 5 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGPPAGY*CSRNCV
Trigger: AACACAGTTCCTACTGCACAAGTACCCAGCAGGTGG...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGGAACTTTCGTTCCAGTaGCTGTCACCACCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRELSFQ*LSPPSL
Trigger: CAGGCTTGGTGGTGACAGCAACTGGAACGAAAGTTC...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACGTGATCACGCAATCTaGTCCTGCTCACAACAGCTC +
Preference number: 5 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGRDHAI*SCSQQL
Trigger: GAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACG...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAAACAAGGCACTTTCCTaGGCAATCCCAACCATGGGG +
Preference number: 5 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGNKALS*AIPTMG
Trigger: CCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGTT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGTCGGACACAATCTGCTaGATCTCAGCAGAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLSDTIC*ISAEQS
Trigger: ACTCTGCTCTGCTGAGATCAAGCAGATTGTGTCCGA...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATGCAGGAGCTCCATGTTaGATCTGCACTGGTCATTTC +
Preference number: 5 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDAGAPC*ICTGHF
Trigger: GAAATGACCAGTGCAGATCAAACATGGAGCTCCTGC...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGGCAGGAGCTCCATGTTaGATCTGCACTGGTCATTTC +
Preference number: 5 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRAGAPC*ICTGHF
Trigger: GAAATGACCAGTGCAGATCAAACATGGAGCTCCTGC...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGCCCGAGGGCTCGGTATaGTCAGAGAATGCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKPEGSV*SENASH
Trigger: ATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGG...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTACGGTATTCCCTGTGTaGTCAAGTATGCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGTVFPV*SSMLQI
Trigger: GATCTGCAGCATACTTGACAACACAGGGAATACCGT...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS CCA 90 bp GCATGGATTCGAGATTCTTCATCAAGTAGCTCCTCTGCTCCCTGGTaGCGTTTGTATTTCCGACGGGGCTTGTACACTTCTGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: AWIRDSSSSSSSAPW*RLYFRRGLYTSERS
Trigger: GGACCTCTCAGAAGTGTACAAGCCCCGTCGGAAATACAAACGCCACCAGGGAGCAGAGGAGCTACTTGATGAAGAATCTCGAATCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS-3UTR CAA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAATTCCTCCTACTACCTaGTCAAAGGGTGATAAGCCT +
Preference number: 5 (lower is better)
Translates to: LTVRSALSGRSASVTRDVIPPTT*SKGDKP
Trigger: AGGCTTATCACCCTTTGACAAGGTAGTAGGAGGAAT...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAATCAGCCTTCTCCATTTaGCTCTGGCGGCTAAATCCA +
Preference number: 5 (lower is better)
Translates to: VELHMTQEALAGGSFYLQSAFSI*LWRLNP
Trigger: TGGATTTAGCCGCCAGAGCAAAATGGAGAAGGCTGA...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGAGCAGCATCTCGTTCTaGCGGCCCTCCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVSSISF*RPSSLN
Trigger: GTTCAAGGAGGAGGGCCGCAAGAACGAGATGCTGCT...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTCCACCTGCTGGGTACTaGTGCAGTAGGAACTGTGTT +
Preference number: 5 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFPPAGY*CSRNCV
Trigger: AACACAGTTCCTACTGCACAAGTACCCAGCAGGTGG...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATGAACTTTCGTTCCAGTaGCTGTCACCACCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: TALPPDTLLALSAGNSVYELSFQ*LSPPSL
Trigger: CAGGCTTGGTGGTGACAGCAACTGGAACGAAAGTTC...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATAACAAGGCACTTTCCTaGGCAATCCCAACCATGGGG +
Preference number: 5 (lower is better)
Translates to: TALPPDTLLALSAGNSVYNKALS*AIPTMG
Trigger: CCCCATGGTTGGGATTGCCAAGGAAAGTGCCTTGTT...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATAAGCCCTTACTTTTGTaGCGCAGGGCCACTGGACAT +
Preference number: 5 (lower is better)
Translates to: TALPPDTLLALSAGNSVYKPLLL*RRATGH
Trigger: ATGTCCAGTGGCCCTGCGCAACAAAAGTAAGGGCTT...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS CCA 90 bp GTAGCATGGATTCGAGATTCTTCATCAAGTAGCTCCTCTGCTCCCTaGTGGCGTTTGTATTTCCGACGGGGCTTGTACACTTCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: VAWIRDSSSSSSSAP*WRLYFRRGLYTSER
Trigger: CCTCTCAGAAGTGTACAAGCCCCGTCGGAAATACAAACGCCACCAGGGAGCAGAGGAGCTACTTGATGAAGAATCTCGAATCCATGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS-3UTR CAA 90 bp TTTCAGGAGGTCCCGAGGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGAATTCCTCCTACTACCTaGTCAAAGGGTGATAAGCCT +
Preference number: 5 (lower is better)
Translates to: FQEVPRARYCQRMLPMPGIPPTT*SKGDKP
Trigger: AGGCTTATCACCCTTTGACAAGGTAGTAGGAGGAAT...TCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGGACCTCCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACGTGGGCATTTCATCCTaGGCAGGACCGAGACAATTT +
Preference number: 5 (lower is better)
Translates to: EKDQERAWGILKMHRTRHVGISS*AGPRQF
Trigger: AAATTGTCTCGGTCCTGCCAAGGATGAAATGCCCAC...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGAGGTCCACAACTGTCTaGATGGCCTTTTCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLRSTTV*MAFSFL
Trigger: GAGAAAAGAAAAGGCCATCAAGACAGTTGTGGACCT...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATGGAAGTGCCGTTTTCTaGTCCTCAGCCTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: TALPPDTLLALSAGNSVYGSAVF*SSAFSI
Trigger: AATGGAGAAGGCTGAGGACAAGAAAACGGCACTTCC...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGGGAAGTGCCGTTTTCTaGTCCTCAGCCTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKGSAVF*SSAFSI
Trigger: AATGGAGAAGGCTGAGGACAAGAAAACGGCACTTCC...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACTCGGACACAATCTGCTaGATCTCAGCAGAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: EKDQERAWGILKMHRTRHSDTIC*ISAEQS
Trigger: ACTCTGCTCTGCTGAGATCAAGCAGATTGTGTCCGA...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GCCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTGCGGCCCTCCTCCTTGTCTTGCGGTGCAAAATaGCTATTTCTCGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: AFAFTLDSSISFLRPSSLSCGAK*LFLDFF
Trigger: GAAGAAATCGAGAAATAGCAATTTTGCACCGCAAGA...CAAGGAGGAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CAA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGAACTGCTTGGTTTCTTaGTGCACTGCTGAAATCTGG +
Preference number: 5 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLNCLVS*CTAEIW
Trigger: CCAGATTTCAGCAGTGCACAAAGAAACCAAGCAGTT...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGGACACCCTACTTGCCTaGAGTGCAGGGAACAGTGTC +
Preference number: 5 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVDTLLA*SAGNSV
Trigger: GACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTC...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGGGTGGCAGTTTCTATTaGCAAGCTGCTGCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVGGSFY*QAAASA
Trigger: GGCGGAAGCAGCAGCTTGCAAATAGAAACTGCCACC...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGCCCGAGGGCTCGGTATaGTCAGAGAATGCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVPEGSV*SENASH
Trigger: ATGGGAAGCATTCTCTGACAATACCGAGCCCTCGGG...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGTATGCATTTGCACTTTaGATAGACACCGTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLYAFAL*IDTVQL
Trigger: CAGCTGGACGGTGTCTATCAAAAGTGCAAATGCATA...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS TCA 90 bp ATCTTCATTCTACTTTGCTTAATTCCTTCCACAATCTGTTCCATCTaGCGTAAAAACTGGTCCCGGGCAGCAGGGGAGGCCATGGCCCTG +
Preference number: 5 (lower is better)
Translates to: IFILLCLIPSTICSI*RKNWSRAAGEAMAL
Trigger: CAGGGCCATGGCCTCCCCTGCTGCCCGGGACCAGTTTTTACGTCAGATGGAACAGATTGTGGAAGGAATTAAGCAAAGTAGAATGAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474546.1
CDS-3UTR CAA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAACATCTACATCAAAGTaGCAAGTGGTGATACACCAA +
Preference number: 5 (lower is better)
Translates to: LTVRSALSGRSASVTRDVTSTSK*QVVIHQ
Trigger: TTGGTGTATCACCACTTGCAACTTTGATGTAGATGT...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGAGCTCTTCAAGATGTTaGGTCTTTTGCGCAATCTGT +
Preference number: 5 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLSSSRC*VFCAIC
Trigger: ACAGATTGCGCAAAAGACCAAACATCTTGAAGAGCT...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGGGTTCTGTAGGATACTaGGATCAGCTTTGGATTCTA +
Preference number: 5 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLGSVGY*DQLWIL
Trigger: TAGAATCCAAAGCTGATCCAAGTATCCTACAGAACC...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGCCCAACATGCATGCCTaGTACTCCTCTGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVPNMHA*YSSALS
Trigger: AGAGAGTGCAGAGGAGTACAAGGCATGCATGTTGGG...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGGCCTCCCTACCACCTTaGGACAAATATTCAAATAAC +
Preference number: 5 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRASLPP*DKYSNN
Trigger: GTTATTTGAATATTTGTCCAAAGGTGGTAGGGAGGC...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GGGCTCGGTATTGTCAGAGAATGCTTCCCATGCCTGGACCCTGGACCTTCTGGTAACTTAAGGATGTTCTaGCTTCCTTTTAACTCCGGA +
Preference number: 5 (lower is better)
Translates to: GLGIVRECFPCLDPGPSGNLRMF*LPFNSG
Trigger: TCCGGAGTTAAAAGGAAGCAAGAACATCCTTAAGTT...ACCAGAAGGTCCAGGGTCCAGGCATGGGAAGCATTCTCTGACAATACCGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TGCTTCAACTTAGCCCTTCAAAACCCCCACATGACCACGGCTCAGGGACCAGCTCTAACAGAGATATGCTaGACAAACTGGGAATTTGCC +
Preference number: 5 (lower is better)
Translates to: CFNLALQNPHMTTAQGPALTEIC*TNWEFA
Trigger: GGCAAATTCCCAGTTTGTCAAGCATATCTCTGTTAG...AGCTGGTCCCTGAGCCGTGGTCATGTGGGGGTTTTGAAGGGCTAAGTTGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTACGGTATTCCCTGTGTaGTCAAGTATGCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFTVFPV*SSMLQI
Trigger: GATCTGCAGCATACTTGACAACACAGGGAATACCGT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCCTGCCACCCACAGCCTaGCACTGTGGTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSLPPTA*HCGPTS
Trigger: AGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTCTGCCACCCACAGCCTaGCACTGTGGTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPLPPTA*HCGPTS
Trigger: AGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGTACAAAAGGTGTACATaGAAAAGTCATTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRYKRCT*KSHSHP
Trigger: GGGGTGGGAATGACTTTTCAATGTACACCTTTTGTA...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGTACAAAAGGTGTACATaGAAAAGTCATTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLYKRCT*KSHSHP
Trigger: GGGGTGGGAATGACTTTTCAATGTACACCTTTTGTA...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS CCA 90 bp AAGTCTTGCATGTACCTTTGTCAAGCACATTATAGCAATGTGAGGTaGGCTGAATTCAAAGCGCAGGCCGGCAGGGTATTAGTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: KSCMYLCQAHYSNVR*AEFKAQAGRVLVGR
Trigger: CCTTCCCACTAATACCCTGCCGGCCTGCGCTTTGAATTCAGCCCACCTCACATTGCTATAATGTGCTTGACAAAGGTACATGCAAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466171.1
CDS-3UTR CAA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTATTTTGCGCAATCTGTTaGTTCAAGGAAATGACTTTC +
Preference number: 5 (lower is better)
Translates to: LTVRSALSGRSASVTRDVFCAIC*FKEMTF
Trigger: GAAAGTCATTTCCTTGAACAAACAGATTGCGCAAAA...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAATACTTGGATCAGCTTaGGATTCTATCTTCTCGAGG +
Preference number: 5 (lower is better)
Translates to: VELHMTQEALAGGSFYLQILGSA*DSIFSR
Trigger: CCTCGAGAAGATAGAATCCAAAGCTGATCCAAGTAT...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAGGTTCTGTAGGATACTaGGATCAGCTTTGGATTCTA +
Preference number: 5 (lower is better)
Translates to: VELHMTQEALAGGSFYLQGSVGY*DQLWIL
Trigger: TAGAATCCAAAGCTGATCCAAGTATCCTACAGAACC...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTAACTGCTTGGTTTCTTaGTGCACTGCTGAAATCTGG +
Preference number: 5 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFNCLVS*CTAEIW
Trigger: CCAGATTTCAGCAGTGCACAAAGAAACCAAGCAGTT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CAGCGTAGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCAAAACATCCAGGTTGTaGAAATCATCACAACTGCAT +
Preference number: 5 (lower is better)
Translates to: QRSLIKCAFNEGDAQPLCKTSRL*KSSQLH
Trigger: ATGCAGTTGTGATGATTTCAACAACCTGGATGTTTT...GCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCTACGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp AGCCTCATCAAATGTGCCTTCAATGAGGGGGATGCACAGCCCCTCTGCATGCTGGACATGTTTAAGCTTTaGTGTTACTGTGCAAACCTG +
Preference number: 5 (lower is better)
Translates to: SLIKCAFNEGDAQPLCMLDMFKL*CYCANL
Trigger: CAGGTTTGCACAGTAACACAAAAGCTTAAACATGTC...CAGCATGCAGAGGGGCTGTGCATCCCCCTCATTGAAGGCACATTTGATGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTGCCACCCACAGCCTTGCACTGTGGTCCCACTTCTTGGTTCACATGGCTGAGATTCTTTTGCAATTACTaGCTTCAACTTAGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: LPPTALHCGPTSWFTWLRFFCNY*LQLSPS
Trigger: TGAAGGGCTAAGTTGAAGCAAGTAATTGCAAAAGAA...TCTCAGCCATGTGAACCAAGAAGTGGGACCACAGTGCAAGGCTGTGGGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATGAATTACTGGTTGCTTaGGATTCATCATGCCATACT +
Preference number: 5 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDELLVA*DSSCHT
Trigger: AGTATGGCATGATGAATCCAAAGCAACCAGTAATTC...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCACTGTCCGGAGTGCCCTTTCAGGCAGGTCTGCTTCGGTCACTAGAGACGTAAAAACCTCTGACACCTaGTTTCATCTCAAACTTCAA +
Preference number: 5 (lower is better)
Translates to: LTVRSALSGRSASVTRDVKTSDT*FHLKLQ
Trigger: TTGAAGTTTGAGATGAAACAAGGTGTCAGAGGTTTT...TACGTCTCTAGTGACCGAAGCAGACCTGCCTGAAAGGGCACTCCGGACAGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TCGGCACGGCTAGGGACTTCATCAATCTTGCGGTGCAAAATTGCTATTTCTCGATCTCGTCATGAGTCATaGCAGAGGTCAAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: SARLGTSSILRCKIAISRSRHES*QRSRYQ
Trigger: CTGGTACCTTGACCTCTGCAATGACTCATGACGAGA...TCGAGAAATAGCAATTTTGCACCGCAAGATTGATGAAGTCCCTAGCCGTGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS CCA 90 bp CTCTGGCGGCTAAATCCATATCTGCCATATTCCAAAAGTGTAGCATaGATTCGAGATTCTTCATCAAGTAGCTCCTCTGCTCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LWRLNPYLPYSKSVA*IRDSSSSSSSAPWW
Trigger: CCACCAGGGAGCAGAGGAGCTACTTGATGAAGAATCTCGAATCCATGCTACACTTTTGGAATATGGCAGATATGGATTTAGCCGCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS CCA 90 bp GATATACGGTGCTTAAAAGTAAAATCAATGACATACAGCCACGGCTaGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGACAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: DIRCLKVKSMTYSHG*GCSGGLRFHLGQQH
Trigger: ATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAGCCGTGGCTGTATGTCATTGATTTTACTTTTAAGCACCGTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGGCTCCCTGGTGGCGTTaGTATTTCCGACGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: HLKLQGYSITYSERDPLKAPWWR*YFRRGL
Trigger: CAAGCCCCGTCGGAAATACAAACGCCACCAGGGAGC...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTAGCTCTTCAAGATGTTaGGTCTTTTGCGCAATCTGT +
Preference number: 5 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFSSSRC*VFCAIC
Trigger: ACAGATTGCGCAAAAGACCAAACATCTTGAAGAGCT...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGTCTGTCAGCGTTTTCTaGGCTTCATTATATCTGGCT +
Preference number: 5 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKSVSVF*ASLYLA
Trigger: AGCCAGATATAATGAAGCCAAGAAAACGCTGACAGA...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTGGGACTTCATCAATCTaGCGGTGCAAAATTGCTATT +
Preference number: 5 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFGTSSI*RCKIAI
Trigger: AATAGCAATTTTGCACCGCAAGATTGATGAAGTCCC...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGTTCTTTTGCAATTACTaGCTTCAACTTAGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRFFCNY*LQLSPS
Trigger: TGAAGGGCTAAGTTGAAGCAAGTAATTGCAAAAGAA...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TTGGCAATCCCAACCATGGGGACAGATGATGGCATCCATCCTATGGGGCTCTTTGCCTCCCTACCACCTTaGGACAAATATTCAAATAAC +
Preference number: 5 (lower is better)
Translates to: LAIPTMGTDDGIHPMGLFASLPP*DKYSNN
Trigger: GTTATTTGAATATTTGTCCAAAGGTGGTAGGGAGGC...AAAGAGCCCCATAGGATGGATGCCATCATCTGTCCCCATGGTTGGGATTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATAAAAAGAATTACTGGTaGCTTTGGATTCATCATGCC +
Preference number: 5 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDKKNYW*LWIHHA
Trigger: GGCATGATGAATCCAAAGCAACCAGTAATTCTTTTT...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GAGGACCAGGGCAGCAGGAGCTCCATGTTTGATCTGCACTGGTCATTTCCAAGGAAAAAGAATTACTGGTaGCTTTGGATTCATCATGCC +
Preference number: 5 (lower is better)
Translates to: EDQGSRSSMFDLHWSFPRKKNYW*LWIHHA
Trigger: GGCATGATGAATCCAAAGCAACCAGTAATTCTTTTT...CCTTGGAAATGACCAGTGCAGATCAAACATGGAGCTCCTGCTGCCCTGGTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTGACAAGCCCTTACTTTaGTTGCGCAGGGCCACTGGA +
Preference number: 5 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPDKPLL*LRRATG
Trigger: TCCAGTGGCCCTGCGCAACAAAAGTAAGGGCTTGTC...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCCCCACGCACCTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATGCACTCTCCAACTTTTaGCTATTACAATGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: LPTHLVITQSCPAHNSSDALSNF*LLQCFN
Trigger: GTTGAAACATTGTAATAGCAAAAAGTTGGAGAGTGC...ATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAGGTGCGTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS GCA 90 bp AAGACAGGCAAAAAGATTTCCACACTACTGCAACTGCTGCAAGCTTaGCTGTCTCCACATACTGCTTCTGCAAGGAACACATGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: KTGKKISTLLQLLQA*LSPHTASARNTCLV
Trigger: AACAAGGCATGTGTTCCTTGCAGAAGCAGTATGTGGAGACAGGCAAGCTTGCAGCAGTTGCAGTAGTGTGGAAATCTTTTTGCCTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470650.1
CDS-3UTR CAA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGAGGTCCACAACTGTCTaGATGGCCTTTTCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVRSTTV*MAFSFL
Trigger: GAGAAAAGAAAAGGCCATCAAGACAGTTGTGGACCT...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGTCTTGCGGTGCAAAATaGCTATTTCTCGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKSCGAK*LFLDFF
Trigger: GAAGAAATCGAGAAATAGCAATTTTGCACCGCAAGA...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAAAGAAAACATCCAGGTaGTTGAAATCATCACAACTG +
Preference number: 5 (lower is better)
Translates to: VELHMTQEALAGGSFYLQKKTSR*LKSSQL
Trigger: CAGTTGTGATGATTTCAACAACCTGGATGTTTTCTT...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CTCGTGATCACGCAATCTTGTCCTGCTCACAACAGCTCTGATCGCGGCTTAAAGAACTTAAGGATGTTCTaGCTTCCTTTTAACTCCGGA +
Preference number: 5 (lower is better)
Translates to: LVITQSCPAHNSSDRGLKNLRMF*LPFNSG
Trigger: TCCGGAGTTAAAAGGAAGCAAGAACATCCTTAAGTT...CTTTAAGCCGCGATCAGAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTCGTGATCACGCAATCTaGTCCTGCTCACAACAGCTC +
Preference number: 5 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPRDHAI*SCSQQL
Trigger: GAGCTGTTGTGAGCAGGACAAGATTGCGTGATCACG...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTGGAGCTGCACATGACCCAAGAAGCGCTCGCAGGTGGCAGTTTCTATTTGCAAAAAACCTCTGACACCTaGTTTCATCTCAAACTTCAA +
Preference number: 5 (lower is better)
Translates to: VELHMTQEALAGGSFYLQKTSDT*FHLKLQ
Trigger: TTGAAGTTTGAGATGAAACAAGGTGTCAGAGGTTTT...TTGCAAATAGAAACTGCCACCTGCGAGCGCTTCTTGGGTCATGTGCAGCTCCAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS CCA 90 bp TGTAAGTCTTCAGCTCTGTCAGCGTTTTCTTGGCTTCATTATATCTaGCTTGTAGGCTGGTGTGACTTGCTCGCAGCTCTTCAAGATGTT +
Preference number: 5 (lower is better)
Translates to: CKSSALSAFSWLHYI*LVGWCDLLAALQDV
Trigger: AACATCTTGAAGAGCTGCGAGCAAGTCACACCAGCCTACAAGCCAGATATAATGAAGCCAAGAAAACGCTGACAGAGCTGAAGACTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTTCAGCCTTCTCCATTTaGCTCTGGCGGCTAAATCCA +
Preference number: 5 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPSAFSI*LWRLNP
Trigger: TGGATTTAGCCGCCAGAGCAAAATGGAGAAGGCTGA...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TCATCCAGGGTATTATATAAAGTGAAGAACTGCTTGGTTTCTTTGTGCACTGCTGCCTTCGCTTTCACCTaGGACAGCAGCATCTCGTTC +
Preference number: 5 (lower is better)
Translates to: SSRVLYKVKNCLVSLCTAAFAFT*DSSISF
Trigger: GAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGC...AGCAGTGCACAAAGAAACCAAGCAGTTCTTCACTTTATATAATACCCTGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CAA 90 bp ACTGCTCTTCCTCCTGACACCCTACTTGCCTTGAGTGCAGGGAACAGTGTCTATAAGAAAACATCCAGGTaGTTGAAATCATCACAACTG +
Preference number: 5 (lower is better)
Translates to: TALPPDTLLALSAGNSVYKKTSR*LKSSQL
Trigger: CAGTTGTGATGATTTCAACAACCTGGATGTTTTCTT...ATAGACACTGTTCCCTGCACTCAAGGCAAGTAGGGTGTCAGGAGGAAGAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGGAATGCCCCACTTGCTaGACATGTTTAAGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVECPTC*TCLSFC
Trigger: ACAAAAGCTTAAACATGTCAAGCAAGTGGGGCATTC...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GAAAAGGATCAAGAGAGGGCCTGGGGGATTCTGAAGATGCACAGAACAAGGCACCTACAAACTATTCCATaGTTTAAGCTGGCCATAATG +
Preference number: 5 (lower is better)
Translates to: EKDQERAWGILKMHRTRHLQTIP*FKLAIM
Trigger: CATTATGGCCAGCTTAAACAATGGAATAGTTTGTAG...GTGCCTTGTTCTGTGCATCTTCAGAATCCCCCAGGCCCTCTCTTGATCCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS GCA 90 bp TCATCTCCACGTGGTGCTCTCTCAGCTTTCAGGTTTTCAATTTCTTaGTGTAGTCGTGTCATCTCCTCTCGACAATGTGCTTTAAATTCC +
Preference number: 5 (lower is better)
Translates to: SSPRGALSAFRFSIS*CSRVISSRQCALNS
Trigger: GGAATTTAAAGCACATTGTCGAGAGGAGATGACACGACTACAGCAAGAAATTGAAAACCTGAAAGCTGAGAGAGCACCACGTGGAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000437999.5
CDS CCA 90 bp TGCGCAATCTGTTTGTTCAAGGAAATGACTTTCCGGCGATGTAGCTaGGAGGTTCCTAATTTTTCTGGACTTTCTTCAGCTGATAGCTCA +
Preference number: 5 (lower is better)
Translates to: CAICLFKEMTFRRCS*EVPNFSGLSSADSS
Trigger: TGAGCTATCAGCTGAAGAAAGTCCAGAAAAATTAGGAACCTCCCAGCTACATCGCCGGAAAGTCATTTCCTTGAACAAACAGATTGCGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS-3UTR CAA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGTATTTCCGACGGGGCTaGTACACTTCTGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: HLKLQGYSITYSERDPLKYFRRG*YTSERS
Trigger: GGACCTCTCAGAAGTGTACAAGCCCCGTCGGAAATA...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGGTAGGCTGGTGTGACTaGCTCGCAGCTCTTCAAGAT +
Preference number: 5 (lower is better)
Translates to: HLKLQGYSITYSERDPLKVGWCD*LAALQD
Trigger: ATCTTGAAGAGCTGCGAGCAAGTCACACCAGCCTAC...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGTCTTGCGGTGCAAAATaGCTATTTCTCGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVSCGAK*LFLDFF
Trigger: GAAGAAATCGAGAAATAGCAATTTTGCACCGCAAGA...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATAAGCCCTTACTTTTGTaGCGCAGGGCCACTGGACAT +
Preference number: 5 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDKPLLL*RRATGH
Trigger: ATGTCCAGTGGCCCTGCGCAACAAAAGTAAGGGCTT...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS TCA 90 bp CTTCAAGATGTTTGGTCTTTTGCGCAATCTGTTTGTTCAAGGAAATaGCTTTCCGGCGATGTAGCTGGGAGGTTCCTAATTTTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LQDVWSFAQSVCSRK*LSGDVAGRFLIFLD
Trigger: GTCCAGAAAAATTAGGAACCTCCCAGCTACATCGCCGGAAAGTCATTTCCTTGAACAAACAGATTGCGCAAAAGACCAAACATCTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS GCA 90 bp GAAATTATAAGACAGGCAAAAAGATTTCCACACTACTGCAACTGCTaGAAGCTTGCCTGTCTCCACATACTGCTTCTGCAAGGAACACAT +
Preference number: 5 (lower is better)
Translates to: EIIRQAKRFPHYCNC*KLACLHILLLQGTH
Trigger: ATGTGTTCCTTGCAGAAGCAGTATGTGGAGACAGGCAAGCTTGCAGCAGTTGCAGTAGTGTGGAAATCTTTTTGCCTGTCTTATAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470650.1
CDS GCA 90 bp AACGAAATTATAAGACAGGCAAAAAGATTTCCACACTACTGCAACTaGTGCAAGCTTGCCTGTCTCCACATACTGCTTCTGCAAGGAACA +
Preference number: 5 (lower is better)
Translates to: NEIIRQAKRFPHYCN*CKLACLHILLLQGT
Trigger: TGTTCCTTGCAGAAGCAGTATGTGGAGACAGGCAAGCTTGCAGCAGTTGCAGTAGTGTGGAAATCTTTTTGCCTGTCTTATAATTTCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470650.1
CDS-3UTR CAA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATGTGGGCATTTCATCCTaGGCAGGACCGAGACAATTT +
Preference number: 5 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDVGISS*AGPRQF
Trigger: AAATTGTCTCGGTCCTGCCAAGGATGAAATGCCCAC...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp GTCAGGCTCAAAGTAACTGTGCTACTGCTAGATACCTACCTCCCTTTTAGGGTGGCACTCTCCAACTTTTaGCTATTACAATGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: VRLKVTVLLLDTYLPFRVALSNF*LLQCFN
Trigger: GTTGAAACATTGTAATAGCAAAAAGTTGGAGAGTGC...CACCCTAAAAGGGAGGTAGGTATCTAGCAGTAGCACAGTTACTTTGAGCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTTCTGTCAGCGTTTTCTaGGCTTCATTATATCTGGCT +
Preference number: 5 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPSVSVF*ASLYLA
Trigger: AGCCAGATATAATGAAGCCAAGAAAACGCTGACAGA...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTATACTTGGATCAGCTTaGGATTCTATCTTCTCGAGG +
Preference number: 5 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPILGSA*DSIFSR
Trigger: CCTCGAGAAGATAGAATCCAAAGCTGATCCAAGTAT...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS TCA 90 bp AGTCGTGTCATCTCCTCTCGACAATGTGCTTTAAATTCCTGTTCTTaGCTTTTCAGATTTTCATTCATGGCTACAAGTGCTCTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SRVISSRQCALNSCS*LFRFSFMATSALRF
Trigger: GAACCTGAGAGCACTTGTAGCCATGAATGAAAATCTGAAAAGTCAAGAACAGGAATTTAAAGCACATTGTCGAGAGGAGATGACACGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000437999.5
CDS-3UTR CAA 90 bp TTACTGTGCAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCCTATGGGGCTCTTTATaGTACTGTTCTGCATTAAGA +
Preference number: 5 (lower is better)
Translates to: LLCKPATWYVCKIYAKWSLWGSL*YCSALR
Trigger: TCTTAATGCAGAACAGTACAATAAAGAGCCCCATAG...GCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTGCACAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGTATGCATTTGCACTTTaGATAGACACCGTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: HLKLQGYSITYSERDPLKYAFAL*IDTVQL
Trigger: CAGCTGGACGGTGTCTATCAAAAGTGCAAATGCATA...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TCATCCAGGGTATTATATAAAGTGAAGAACTGCTTGGTTTCTTTGTGCACTGCTGGGACTTCATCAATCTaGCGGTGCAAAATTGCTATT +
Preference number: 5 (lower is better)
Translates to: SSRVLYKVKNCLVSLCTAGTSSI*RCKIAI
Trigger: AATAGCAATTTTGCACCGCAAGATTGATGAAGTCCC...AGCAGTGCACAAAGAAACCAAGCAGTTCTTCACTTTATATAATACCCTGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS-3UTR CAA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGGTGCCACCTGTTCTTTaGCAATTACTTGCTTCAACT +
Preference number: 5 (lower is better)
Translates to: HLKLQGYSITYSERDPLKVPPVL*QLLAST
Trigger: AGTTGAAGCAAGTAATTGCAAAAGAACAGGTGGCAC...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATCTAACAGAGATATGCTaGACAAACTGGGAATTTGCC +
Preference number: 5 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDLTEIC*TNWEFA
Trigger: GGCAAATTCCCAGTTTGTCAAGCATATCTCTGTTAG...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CAAACCTGCCACCTGGTATGTTTGCAAGATTTATGCAAAATGGAGCACAAACCTCTACAAACTATTCCATaGTTTAAGCTGGCCATAATG +
Preference number: 5 (lower is better)
Translates to: QTCHLVCLQDLCKMEHKPLQTIP*FKLAIM
Trigger: CATTATGGCCAGCTTAAACAATGGAATAGTTTGTAG...AGGTTTGTGCTCCATTTTGCATAAATCTTGCAAACATACCAGGTGGCAGGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS TCA 90 bp TTTCTTGAAAGAGCAAATCAACATCTACATCAAAGTTGCAAGTGGTaGTACACCAAGTCATTCCTCCTACTACCTTGTCAAAGGGTGATA +
Preference number: 5 (lower is better)
Translates to: FLERANQHLHQSCKW*YTKSFLLLPCQRVI
Trigger: TATCACCCTTTGACAAGGTAGTAGGAGGAATGACTTGGTGTATCACCACTTGCAACTTTGATGTAGATGTTGATTTGCTCTTTCAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS TCA 90 bp CACCAAACAACACTTACTCGACAATGTGCTTTAAATTCCTGTTCTTaGCTTTTCAGATTTTCATTCATGGCTACAAGTGCTCTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: HQTTLTRQCALNSCS*LFRFSFMATSALRF
Trigger: GAACCTGAGAGCACTTGTAGCCATGAATGAAAATCTGAAAAGTCAAGAACAGGAATTTAAAGCACATTGTCGAGTAAGTGTTGTTTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488908.1
CDS-3UTR CAA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATGAATTACTGGTTGCTTaGGATTCATCATGCCATACT +
Preference number: 5 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDELLVA*DSSCHT
Trigger: AGTATGGCATGATGAATCCAAAGCAACCAGTAATTC...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS GCA 90 bp GTCCTGGTTTATTTGCTGACACCAAACAACACTTACTCGACAATGTaGTTTAAATTCCTGTTCTTGACTTTTCAGATTTTCATTCATGGC +
Preference number: 5 (lower is better)
Translates to: VLVYLLTPNNTYSTM*FKFLFLTFQIFIHG
Trigger: GCCATGAATGAAAATCTGAAAAGTCAAGAACAGGAATTTAAAGCACATTGTCGAGTAAGTGTTGTTTGGTGTCAGCAAATAAACCAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488908.1
CDS-3UTR CAA 90 bp TCAAAGTGTATTCAGGCAACAAAAACTGATTTATCCGTAGTAGGCCTTGTCGATTTTTGCGCAATCTGTTaGTTCAAGGAAATGACTTTC +
Preference number: 5 (lower is better)
Translates to: SKCIQATKTDLSVVGLVDFCAIC*FKEMTF
Trigger: GAAAGTCATTTCCTTGAACAAACAGATTGCGCAAAA...ATCGACAAGGCCTACTACGGATAAATCAGTTTTTGTTGCCTGAATACACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS-3UTR CAA 90 bp CATCTCAAACTTCAAGGTTACAGTATAACATACTCTGAGAGAGACCCTCTAAAGAAAACATCCAGGTTGTaGAAATCATCACAACTGCAT +
Preference number: 5 (lower is better)
Translates to: HLKLQGYSITYSERDPLKKTSRL*KSSQLH
Trigger: ATGCAGTTGTGATGATTTCAACAACCTGGATGTTTT...CTTTAGAGGGTCTCTCTCAGAGTATGTTATACTGTAACCTTGAAGTTTGAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS TCA 72 bp GGAGACCCTGGCCCTCCGGCCCCCTGGGCAACCCCATaGTCCGACCGGGCTGTCGTAAGGCGAGAGCGAAGC +
Preference number: 6 (lower is better)
Translates to: GDPGPPAPWATP*SDRAVVRRERS
Trigger: GCTTCGCTCTCGCCTTACGACAGCCCGGTCGGATCATGGGGTTGCCCAGGGGGCCGGAGGGCCAGGGTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS GCA 72 bp AGCGAAGCCCGCCAAGCGTCCGGAGGAAGCTGTCCCTaGCGCGGAGCTGCTACCGGGGTGGAGTACAAAGCG +
Preference number: 6 (lower is better)
Translates to: SEARQASGGSCP*RGAATGVEYKA
Trigger: CGCTTTGTACTCCACCCCGGTAGCAGCTCCGCGGCAGGGACAGCTTCCTCCGGACGCTTGGCGGGCTTCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS CCA 72 bp GAGGAAGCTGTCCCTGCCGCGGAGCTGCTACCGGGGTaGAGTACAAAGCGGAAACTCCCTCTGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: EEAVPAAELLPG*STKRKLPLPPP
Trigger: CGGCGGCGGCAGAGGGAGTTTCCGCTTTGTACTCCACCCCGGTAGCAGCTCCGCGGCAGGGACAGCTTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS GCA 72 bp CCAAGCGTCCGGAGGAAGCTGTCCCTGCCGCGGAGCTaGTACCGGGGTGGAGTACAAAGCGGAAACTCCCTC +
Preference number: 6 (lower is better)
Translates to: PSVRRKLSLPRS*YRGGVQSGNSL
Trigger: GAGGGAGTTTCCGCTTTGTACTCCACCCCGGTAGCAGCTCCGCGGCAGGGACAGCTTCCTCCGGACGCTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS GCA 72 bp AGCAGAGCAGAGTCCCACAATCTGGCCCACGGAGCTTaGGGTGAGACGGCTCTCCTCATTTGCCATAGCGGT +
Preference number: 6 (lower is better)
Translates to: SRAESHNLAHGA*GETALLICHSG
Trigger: ACCGCTATGGCAAATGAGGAGAGCCGTCTCACCGCAAGCTCCGTGGGCCAGATTGTGGGACTCTGCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS CCA 72 bp ATCTGCTTGATCTCAGCAGAGCAGAGTCCCACAATCTaGCCCACGGAGCTTGCGGTGAGACGGCTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ICLISAEQSPTI*PTELAVRRLSS
Trigger: TGAGGAGAGCCGTCTCACCGCAAGCTCCGTGGGCCAGATTGTGGGACTCTGCTCTGCTGAGATCAAGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS CCA 72 bp CGCTGCTCTTCAGCTGCTCGAAGCTCATCTTCCTCGTaGGCATCAGCTTTTTCTGTAGCTGACAGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: RCSSAARSSSSS*ASAFSVADSPA
Trigger: AGCAGGGCTGTCAGCTACAGAAAAAGCTGATGCCCACGAGGAAGATGAGCTTCGAGCAGCTGAAGAGCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS GCA 72 bp GGAAGAGTGCTGAAGCTCATTCTCGTCATGAGTCATTaGAGAGGTCAAGGTACCAGGCGGCTCTCCACTGGA +
Preference number: 6 (lower is better)
Translates to: GRVLKLILVMSH*RGQGTRRLSTG
Trigger: TCCAGTGGAGAGCCGCCTGGTACCTTGACCTCTGCAATGACTCATGACGAGAATGAGCTTCAGCACTCTTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437999.5
CDS CAA 72 bp TCTTCATCAAGTAGCTCCTCTGCTCCCTGGTGGCGTTaGTATTTCCGACGGGGCTTGTACACTTCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSAPWWR*YFRRGLYTSER
Trigger: CCTCTCAGAAGTGTACAAGCCCCGTCGGAAATACAAACGCCACCAGGGAGCAGAGGAGCTACTTGATGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS CAA 72 bp TCAGACTGCTTCTCTGCATACTCGGACACAATCTGCTaGATCTCAGCAGAGCAGAGTCCCACAATCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SDCFSAYSDTIC*ISAEQSPTIWP
Trigger: GGGCCAGATTGTGGGACTCTGCTCTGCTGAGATCAAGCAGATTGTGTCCGAGTATGCAGAGAAGCAGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS CAA 72 bp AGCTCAGACTTCTCTGCATACTCGGACACAATCTGCTaGATCTCAGCAGAGCAGAGTCCCACAATCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SSDFSAYSDTIC*ISAEQSPTIWP
Trigger: GGGCCAGATTGTGGGACTCTGCTCTGCTGAGATCAAGCAGATTGTGTCCGAGTATGCAGAGAAGTCTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460781.1
CDS CAA 90 bp TCAGCTGATAGCTCAGACTTCTCTGCATACTCGGACACAATCTGCTaGATCTCAGCAGAGCAGAGTCCCACAATCTGGCCCACGGAGCTT +
Preference number: 6 (lower is better)
Translates to: SADSSDFSAYSDTIC*ISAEQSPTIWPTEL
Trigger: AAGCTCCGTGGGCCAGATTGTGGGACTCTGCTCTGCTGAGATCAAGCAGATTGTGTCCGAGTATGCAGAGAAGTCTGAGCTATCAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460781.1
CDS TCA 72 bp CTTGCATGTACCTTTGTCAAGCACATTATAGCAATGTaGGGTGGGCTGAATTCAAAGCGCAGGCCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LACTFVKHIIAM*GGLNSKRRPAG
Trigger: CCCTGCCGGCCTGCGCTTTGAATTCAGCCCACCTCACATTGCTATAATGTGCTTGACAAAGGTACATGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466171.1
CDS CCA 72 bp CGAGATTCTTCATCAAGTAGCTCCTCTGCTCCCTGGTaGCGTTTGTATTTCCGACGGGGCTTGTACACTTCT +
Preference number: 6 (lower is better)
Translates to: RDSSSSSSSAPW*RLYFRRGLYTS
Trigger: AGAAGTGTACAAGCCCCGTCGGAAATACAAACGCCACCAGGGAGCAGAGGAGCTACTTGATGAAGAATCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS CAA 90 bp ATTCGAGATTCTTCATCAAGTAGCTCCTCTGCTCCCTGGTGGCGTTaGTATTTCCGACGGGGCTTGTACACTTCTGAGAGGTCCACAACT +
Preference number: 6 (lower is better)
Translates to: IRDSSSSSSSAPWWR*YFRRGLYTSERSTT
Trigger: AGTTGTGGACCTCTCAGAAGTGTACAAGCCCCGTCGGAAATACAAACGCCACCAGGGAGCAGAGGAGCTACTTGATGAAGAATCTCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS TCA 72 bp GCAGCAGGGGAGGCCATGGCCTGTGAGAAGTTCTCATaGATTGAGTTCAGCAGACTAATCTGGGGAAGTAAA +
Preference number: 6 (lower is better)
Translates to: AAGEAMACEKFS*IEFSRLIWGSK
Trigger: TTTACTTCCCCAGATTAGTCTGCTGAACTCAATTCATGAGAACTTCTCACAGGCCATGGCCTCCCCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470650.1
CDS GCA 72 bp GATAGCTCAGACTTCTCTGCATACTCGGACACAATCTaGTTGATCTCAGCAGAGCAGAGTCCCACAATCTGG +
Preference number: 6 (lower is better)
Translates to: DSSDFSAYSDTI*LISAEQSPTIW
Trigger: CCAGATTGTGGGACTCTGCTCTGCTGAGATCAAGCAGATTGTGTCCGAGTATGCAGAGAAGTCTGAGCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460781.1
CDS CCA 72 bp ATTCGAGATTCTTCATCAAGTAGCTCCTCTGCTCCCTaGTGGCGTTTGTATTTCCGACGGGGCTTGTACACT +
Preference number: 6 (lower is better)
Translates to: IRDSSSSSSSAP*WRLYFRRGLYT
Trigger: AGTGTACAAGCCCCGTCGGAAATACAAACGCCACCAGGGAGCAGAGGAGCTACTTGATGAAGAATCTCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS CCA 72 bp GGCATACTAAGTAGCCTTTATGGCATCTCTAAAGTCTaGGCAGCATCACAGACGGATCTGGGACTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: GILSSLYGISKV*AASQTDLGLLH
Trigger: ATGGAGAAGTCCCAGATCCGTCTGTGATGCTGCCCAGACTTTAGAGATGCCATAAAGGCTACTTAGTATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474006.1
CDS CAA 90 bp CTTGCTCGCAGCTCTTCAAGATGTTTGGTCTTTTGCGCAATCTGTTaGTTCAAGGAAATGACTTTCCGGCGATGTAGCTGGGAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: LARSSSRCLVFCAIC*FKEMTFRRCSWEVP
Trigger: AGGAACCTCCCAGCTACATCGCCGGAAAGTCATTTCCTTGAACAAACAGATTGCGCAAAAGACCAAACATCTTGAAGAGCTGCGAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS GCA 72 bp CGTGGTGCTCTCTCAGCTTTCAGGTTTTCAATTTCTTaGTGTAGTCGTGTCATCTCCTCTCGACAATGTGCT +
Preference number: 6 (lower is better)
Translates to: RGALSAFRFSIS*CSRVISSRQCA
Trigger: AGCACATTGTCGAGAGGAGATGACACGACTACAGCAAGAAATTGAAAACCTGAAAGCTGAGAGAGCACCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000437999.5
CDS GCA 72 bp AGACAGGCAAAAAGATTTCCACACTACTGCAACTGCTaGAAGCTTGCCTGTCTCCACATACTGCTTCTGCAA +
Preference number: 6 (lower is better)
Translates to: RQAKRFPHYCNC*KLACLHILLLQ
Trigger: TTGCAGAAGCAGTATGTGGAGACAGGCAAGCTTGCAGCAGTTGCAGTAGTGTGGAAATCTTTTTGCCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470650.1
CDS CCA 72 bp TGCTTAAAAGTAAAATCAATGACATACAGCCACGGCTaGGGATGTTCAGGAGGCCTTCGCTTTCACCTTGGA +
Preference number: 6 (lower is better)
Translates to: CLKVKSMTYSHG*GCSGGLRFHLG
Trigger: TCCAAGGTGAAAGCGAAGGCCTCCTGAACATCCCCAGCCGTGGCTGTATGTCATTGATTTTACTTTTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS CCA 72 bp ATGTACCTTTGTCAAGCACATTATAGCAATGTGAGGTaGGCTGAATTCAAAGCGCAGGCCGGCAGGGTATTA +
Preference number: 6 (lower is better)
Translates to: MYLCQAHYSNVR*AEFKAQAGRVL
Trigger: TAATACCCTGCCGGCCTGCGCTTTGAATTCAGCCCACCTCACATTGCTATAATGTGCTTGACAAAGGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466171.1
CDS CAA 72 bp CAAAAAGATTTCCACACTACTGCAACTGCTGCAAGCTaGCCTGTCTCCACATACTGCTTCTGCAAGGAACAC +
Preference number: 6 (lower is better)
Translates to: QKDFHTTATAAS*PVSTYCFCKEH
Trigger: GTGTTCCTTGCAGAAGCAGTATGTGGAGACAGGCAAGCTTGCAGCAGTTGCAGTAGTGTGGAAATCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470650.1
CDS GCA 72 bp AAAAAGATTTCCACACTACTGCAACTGCTGCAAGCTTaGCTGTCTCCACATACTGCTTCTGCAAGGAACACA +
Preference number: 6 (lower is better)
Translates to: KKISTLLQLLQA*LSPHTASARNT
Trigger: TGTGTTCCTTGCAGAAGCAGTATGTGGAGACAGGCAAGCTTGCAGCAGTTGCAGTAGTGTGGAAATCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470650.1
CDS GCA 72 bp ATAAGACAGGCAAAAAGATTTCCACACTACTGCAACTaGTGCAAGCTTGCCTGTCTCCACATACTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: IRQAKRFPHYCN*CKLACLHILLL
Trigger: CAGAAGCAGTATGTGGAGACAGGCAAGCTTGCAGCAGTTGCAGTAGTGTGGAAATCTTTTTGCCTGTCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470650.1
CDS CCA 72 bp TCTCACTGTAAGTCTTCAGCTCTGTCAGCGTTTTCTTaGCTTCATTATATCTGGCTTGTAGGCTGGTGTGAC +
Preference number: 6 (lower is better)
Translates to: SHCKSSALSAFS*LHYIWLVGWCD
Trigger: GTCACACCAGCCTACAAGCCAGATATAATGAAGCCAAGAAAACGCTGACAGAGCTGAAGACTTACAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319432.9
ENST00000376300.7
CDS CAA 72 bp TGGATCAGCTTTGGATTCTATCTTCTCGAGGGCTGCTaGCTCTTTGTCCAGTTTCTCACTGTAAGTCTTCAG +
Preference number: 6 (lower is better)
Translates to: WISFGFYLLEGC*LFVQFLTVSLQ
Trigger: CTGAAGACTTACAGTGAGAAACTGGACAAAGAGCAAGCAGCCCTCGAGAAGATAGAATCCAAAGCTGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000488908.1
CDS CAA 72 bp AAAAGTAGGGATACTGGGTTGGTTTCGGAGACGTCTTaGAAGATCCTAGCTTCCAAATCGTCCAGGAAGTAC +
Preference number: 6 (lower is better)
Translates to: KSRDTGLVSETS*KILASKSSRKY
Trigger: GTACTTCCTGGACGATTTGGAAGCTAGGATCTTCAAAGACGTCTCCGAAACCAACCCAGTATCCCTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460781.1
CDS TCA 72 bp GTTTGGTCTTTTGCGCAATCTGTTTGTTCAAGGAAATaGCTTTCCGGCGATGTAGCTGGGAGGTTCCTAATT +
Preference number: 6 (lower is better)
Translates to: VWSFAQSVCSRK*LSGDVAGRFLI
Trigger: AATTAGGAACCTCCCAGCTACATCGCCGGAAAGTCATTTCCTTGAACAAACAGATTGCGCAAAAGACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS TCA 72 bp TTCTTGGCTTCATTATATCTGGCTTGTAGGCTGGTGTaGCTTGCTCGCAGCTCTTCAAGATGTTTGGTCTTT +
Preference number: 6 (lower is better)
Translates to: FLASLYLACRLV*LARSSSRCLVF
Trigger: AAAGACCAAACATCTTGAAGAGCTGCGAGCAAGTCACACCAGCCTACAAGCCAGATATAATGAAGCCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS CAA 72 bp AGCTCTTCAAGATGTTTGGTCTTTTGCGCAATCTGTTaGTTCAAGGAAATGACTTTCCGGCGATGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: SSSRCLVFCAIC*FKEMTFRRCSW
Trigger: CCAGCTACATCGCCGGAAAGTCATTTCCTTGAACAAACAGATTGCGCAAAAGACCAAACATCTTGAAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS CAA 72 bp GTGACTTGCTCGCAGCTCTTCAAGATGTTTGGTCTTTaGCGCAATCTGTTTGTTCAAGGAAATGACTTTCCG +
Preference number: 6 (lower is better)
Translates to: VTCSQLFKMFGL*RNLFVQGNDFP
Trigger: CGGAAAGTCATTTCCTTGAACAAACAGATTGCGCAAAAGACCAAACATCTTGAAGAGCTGCGAGCAAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS CCA 72 bp TGTTTGTTCAAGGAAATGACTTTCCGGCGATGTAGCTaGGAGGTTCCTAATTTTTCTGGACTTTCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: CLFKEMTFRRCS*EVPNFSGLSSA
Trigger: AGCTGAAGAAAGTCCAGAAAAATTAGGAACCTCCCAGCTACATCGCCGGAAAGTCATTTCCTTGAACAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319432.9
ENST00000376300.7
ENST00000460781.1
CDS CCA 72 bp AATCCATATCTCCTGCCATATTCCAAAAGTGTAGCATaGATTCGAGATTCTTCATCAAGTAGCTCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: NPYLLPYSKSVA*IRDSSSSSSSA
Trigger: AGCAGAGGAGCTACTTGATGAAGAATCTCGAATCCATGCTACACTTTTGGAATATGGCAGGAGATATGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376300.7
ENST00000460781.1
CDS CAA 72 bp GGTAAACCAAGAGATTCAATAAGCGTCCTGGTTTATTaGCTGACACCAAACAACACTTACTCGACAATGTGC +
Preference number: 6 (lower is better)
Translates to: GKPRDSISVLVY*LTPNNTYSTMC
Trigger: GCACATTGTCGAGTAAGTGTTGTTTGGTGTCAGCAAATAAACCAGGACGCTTATTGAATCTCTTGGTTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488908.1
CDS CAA 90 bp GACAACGGAGGTAAACCAAGAGATTCAATAAGCGTCCTGGTTTATTaGCTGACACCAAACAACACTTACTCGACAATGTGCTTTAAATTC +
Preference number: 6 (lower is better)
Translates to: DNGGKPRDSISVLVY*LTPNNTYSTMCFKF
Trigger: GAATTTAAAGCACATTGTCGAGTAAGTGTTGTTTGGTGTCAGCAAATAAACCAGGACGCTTATTGAATCTCTTGGTTTACCTCCGTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488908.1
CDS CCA 72 bp CTAAATCCATATCTGCCATATTCCAAAAGTGTAGCATaGATTCGAGATTCTTCATCAAGTAGCTCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: LNPYLPYSKSVA*IRDSSSSSSSA
Trigger: AGCAGAGGAGCTACTTGATGAAGAATCTCGAATCCATGCTACACTTTTGGAATATGGCAGATATGGATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319432.9
CDS TCA 72 bp AGGAGGACTGACAGTACTTACTGTGAGAAGTTCTCATaGATTGAGTTCAGCAGACTAATCTCTTTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: RRTDSTYCEKFS*IEFSRLISFSK
Trigger: TTTGGAAAAAGAGATTAGTCTGCTGAACTCAATTCATGAGAACTTCTCACAGTAAGTACTGTCAGTCCTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466171.1