Pregenerated sensors for CCDC89 (Homo sapiens)
Ensembl gene IDs: ENSG00000179071Ensembl transcript IDs: ENST00000316398.5
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTaGGTAATTGTGCTAATTATTTTTCACAATGGCACATCTCACTGC | + |
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Preference number: 1 (lower is better) Translates to: LTISTMGDYKPNYLQ*VIVLIIFHNGTSHC Trigger: GCAGTGAGATGTGCCATTGTGAAAAATAATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| 3UTR-3UTR GCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCAGCTTTTCTTTGAGTTaGCTTTTGTGCTTGAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LIHVCLQSQLWETISLTISFSLS*LLCLKV Trigger: TACTTTCAAGCACAAAAGGCAACTCAAAGAAAAGCT...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| 3UTR-3UTR CAA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTATTTGAATTCTGAATaGCAGGCCAGAGGAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LIHVCLQSQLWETISLTIYLNSE*QARGSR Trigger: TCTGCTTCCTCTGGCCTGCAATTCAGAATTCAAATA...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| 3UTR GCA 72 bp | CTGCAAAGCATTCATGCTATTATGCTGATACATGTTTaGTTACAATCTCAACTATGGGAGACTATAAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: LQSIHAIMLIHV*LQSQLWETISL Trigger: TAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAGCATAATAGCATGAATGCTTTGCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| 3UTR-3UTR CAA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTGAAATCTGGCAAATCTaGTGTATTCTAGGTGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: TSAMICYPKLSNCLLAYREIWQI*CILGVE Trigger: TTCTACACCTAGAATACACAAGATTTGCCAGATTTC...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGATGGGTGCAGGCCTGCTaGCTCTGTAGCTCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGWVQAC*LCSSSS Trigger: GCTGCTGGAGCTACAGAGCCAGCAGGCCTGCACCCA...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGATTTCTAGCTCCCCAGTaGGGGCCTCACACCGGACTG | + |
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Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGFLAPQ*GPHTGL Trigger: CAGTCCGGTGTGAGGCCCTCACTGGGGAGCTAGAAA...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGACAGTCCCCGGAGGTTTaGCAAGGCTTCCCTCAGACC | + |
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Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGQSPEV*QGFPQT Trigger: GGTCTGAGGGAAGCCTTGGCAAACCTCCGGGGACTG...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGATGCTGCTTGAGGGTCTaGAGCTGGCTGCGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGCCLRV*SWLRSC Trigger: ACAGCTGCGCAGCCAGCTGCAGACCCTCAAGCAGCA...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGATGCTCCACAGCCTGCTaGTGCTGCTGCTTGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGCSTAC*CCCLRV Trigger: GACCCTCAAGCAGCAGCACCAGCAGGCTGTGGAGCA...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTCTTCTCGCGCGCCTGTaGCTGGCAGGCATCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: TSAMICYPKLSNCLLAYRLLARL*LAGILS Trigger: GCTCAGGATGCCTGCCAGGCACAGGCGCGCGAGAAG...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGCCTGCTGGTGCTGCTaGTTGAGGGTCTGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LTISTMGDYKPNYLQWVIACWCC*LRVCSW Trigger: CCAGCTGCAGACCCTCAAGCAGCAGCACCAGCAGGC...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTCTGGCCTGCAGCTCCTaGCTCAGGCTGCTGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LTISTMGDYKPNYLQWVILACSS*LRLLCV Trigger: GACACACAGCAGCCTGAGCCAGGAGCTGCAGGCCAG...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGACCTTCAGAGCCTGGCTaGAGAGGCTGCTATTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGPSEPG*RGCYSP Trigger: TGGAGAATAGCAGCCTCTTCAGCCAGGCTCTGAAGG...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCGGGTCTGCAGCTGGCTaGGCAGCTGTTCTGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTIGSAAG*AAVLSP Trigger: AGGAGACAGAACAGCTGCGCAGCCAGCTGCAGACCC...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCACAGCCTGCTGGTGCTaGTGCTTGAGGGTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTITACWC*CLRVCS Trigger: GCTGCAGACCCTCAAGCAGCAGCACCAGCAGGCTGT...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTTCCACAGCCTGCTGGTaGTGCTGCTTGAGGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: STMGDYKPNYLQWVIVLISTACW*CCLRVC Trigger: GCAGACCCTCAAGCAGCAGCACCAGCAGGCTGTGGA...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTTCTCTAGTGACGGTCTaGAGCCTGGCCTGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTISTMGDYKPNYLQWVISLVTV*SLACSS Trigger: GGAGCTGCAGGCCAGGCTGCAGACCGTCACTAGAGA...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGAGGAGCCTGCTGTTTCTaGAGCATAGGCGCTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGGACCF*SIGALI Trigger: GATGAGAGCGCCTATGCTCCAGAAACAGCAGGCTCC...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCGCGGGGTGTCCATCCTaGGAGCCTGCTGTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTIAGCPS*EPAVSG Trigger: TCCAGAAACAGCAGGCTCCCAGGATGGACACCCCGC...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCAGCAGCTCTAGGATCTaGCAGCGCTCCAGGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTISSSRI*QRSRAS Trigger: TGAGGCCCTGGAGCGCTGCCAGATCCTAGAGCTGCT...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTCTGTCTCCTTGGTGTaGGTGCAGGCCTGCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTISVSLV*VQACWL Trigger: GAGCCAGCAGGCCTGCACCCACACCAAGGAGACAGA...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTCCTCCAGCTCTGCATTaGGCAGCTCTAGGATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: STMGDYKPNYLQWVIVLIPPALH*AALGSG Trigger: GCCAGATCCTAGAGCTGCTCAATGCAGAGCTGGAGG...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTCTCCTTGGTGTGGGTaGAGGCCTGCTGGCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTISPWCG*RPAGSV Trigger: TACAGAGCCAGCAGGCCTGCACCCACACCAAGGAGA...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCACAGCCACTGCCTCTTaGTCAAACCGCTCCAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTITATAS*SNRSSA Trigger: TGCGCTGGAGCGGTTTGAGCAAGAGGCAGTGGCTGT...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTGCGCTGAAGCTCCCTaGCTCTCAAGTTGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTICAEAP*LSSCCP Trigger: TGGACAGCAACTTGAGAGTCAGGGAGCTTCAGCGCA...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTTCCATCCTGGGAGCCTaGTGTTTCTGGAGCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: LTISTMGDYKPNYLQWVISILGA*CFWSIG Trigger: GCCTATGCTCCAGAAACAGCAGGCTCCCAGGATGGA...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTATCTGCTCCACAGCCTaGTGGTGCTGCTGCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TSAMICYPKLSNCLLAYRICSTA*WCCCLR Trigger: CCTCAAGCAGCAGCACCAGCAGGCTGTGGAGCAGAT...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTTCTGCCTTAGCTATCTaGTCCACAGCCTGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LTISTMGDYKPNYLQWVISALAI*STACWC Trigger: GCACCAGCAGGCTGTGGAGCAGATAGCTAAGGCAGA...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGAAACCGCTCCAGCGCATaGTTCCTGTCTTCATTTGCT | + |
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Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGNRSSA*FLSSFA Trigger: AGCAAATGAAGACAGGAAGCATGCGCTGGAGCGGTT...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTCCTCACACCGGACTGTaGGCTGTAATACTTTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: STMGDYKPNYLQWVIVLIPHTGL*AVILSP Trigger: AGGCGAAAGTATTACAGCTCACAGTCCGGTGTGAGG...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTCCATCTACTTTGCGCTaGAGCTCCCTGACTCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: STMGDYKPNYLQWVIVLIPSTLR*SSLTLK Trigger: CTTGAGAGTCAGGGAGCTTCAGCGCAAAGTAGATGG...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTCTTCAGACTGCAGCCTaGGTTCATCGTAGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LTISTMGDYKPNYLQWVILQTAA*VHRRPS Trigger: AGAAGGCCTACGATGAACTCAGGCTGCAGTCTGAAG...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTCCAAGCTGTGCTTTTTaGAGGCTTCAGACTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: STMGDYKPNYLQWVIVLIPSCAF*RLQTAA Trigger: GGCTGCAGTCTGAAGCCTTCAAAAAGCACAGCTTGG...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTAGGATGCAGATGAGCTaGGACTGCTCTTCAATGCGG | + |
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Preference number: 4 (lower is better) Translates to: LTISTMGDYKPNYLQWVIRMQMS*DCSSMR Trigger: CCGCATTGAAGAGCAGTCCCAGCTCATCTGCATCCT...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTCGGAGCATCAACTCGTaGTTGGCTGCTAGGGTCATA | + |
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Preference number: 4 (lower is better) Translates to: LTISTMGDYKPNYLQWVIRSINS*LAARVI Trigger: TATGACCCTAGCAGCCAACCACGAGTTGATGCTCCG...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTCATCCACTAAGGGCTaGCTACAGTCTTTTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTISSTKG*LQSFPL Trigger: GAGGGGAAAAGACTGTAGTCAGCCCTTAGTGGATGA...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTGGCGGAGTTTGCCATTaGGTTCTCTCTCCTTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: TSAMICYPKLSNCLLAYRGGVCH*VLSPCL Trigger: TAAGCAAGGAGAGAGAACTCAATGGCAAACTCCGCC...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCAAGCTGGCAGATCTCTaGCTGTTTGTTCTGAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTIKLADL*LFVLKH Trigger: GTGCTTCAGAACAAACAGGCAGAGATCTGCCAGCTT...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTTCATCCTTCAGAGCCTaGCTGAAGAGGCTGCTATTC | + |
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Preference number: 4 (lower is better) Translates to: TSAMICYPKLSNCLLAYRSSFRA*LKRLLF Trigger: GAATAGCAGCCTCTTCAGCCAGGCTCTGAAGGATGA...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTCTTTGCCCCTTTCAATaGACAGCTGCAGCAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: TSAMICYPKLSNCLLAYRLCPFQ*TAAATP Trigger: AGGAGTTGCTGCAGCTGTCCATTGAAAGGGGCAAAG...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTTCTTGTATTCATCCTTaGAGCGGAGCATCAACTCGT | + |
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Preference number: 4 (lower is better) Translates to: STMGDYKPNYLQWVIVLISCIHP*SGASTR Trigger: ACGAGTTGATGCTCCGCTTCAAGGATGAATACAAGA...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTTCTCCTCCCTCAGCTTaGTGTTCTCACTCTTGTATT | + |
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Preference number: 4 (lower is better) Translates to: STMGDYKPNYLQWVIVLISPPSA*CSHSCI Trigger: AATACAAGAGTGAGAACATCAAGCTGAGGGAGGAGA...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR TCA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTTCTGCCTGTTTGTTCTaGAGCACTTTGCCCCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TSAMICYPKLSNCLLAYRSACLF*STLPLS Trigger: TGAAAGGGGCAAAGTGCTTCAGAACAAACAGGCAGA...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTTGTTCTGAAGCACTTTaGCCCTTTCAATGGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: LTISTMGDYKPNYLQWVICSEAL*PFQWTA Trigger: AGCTGTCCATTGAAAGGGGCAAAGTGCTTCAGAACA...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR GCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGAAAAAGATCCAAGCTGTaGTTTTTGAAGGCTTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGKRSKL*FLKASD Trigger: GTCTGAAGCCTTCAAAAAGCACAGCTTGGATCTTTT...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS-3UTR CCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGATCCGTCTCCTCTTCCTaGTTGTTCAGTTTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGSVSSS*LFSFSF Trigger: AAATGAAAAACTGAACAACCAGGAAGAGGAGACGGA...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CCA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTAACTTTTCCTCAAGCTaGCAGATCTCTGCCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: STMGDYKPNYLQWVIVLINFSSS*QISACL Trigger: CAAACAGGCAGAGATCTGCCAGCTTGAGGAAAAGTT...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR TCA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTAGATCACGTCTGCTATaGTTTGTTACCCCAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: STMGDYKPNYLQWVIVLIRSRLL*FVTPNC Trigger: ACAATTTGGGGTAACAAATCATAGCAGACGTGATCT...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CCA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGATTACAATCTCAACTATaGGAGACTATAAGCCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LAIMLRRKYLNSELQARGLQSQL*ETISLT Trigger: AGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAA...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| 3UTR CAA 72 bp | TCTGCAAAGCATTCATGCTATTATGCTGATACATGTTaGCTTACAATCTCAACTATGGGAGACTATAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAKHSCYYADTC*LTISTMGDYKP Trigger: AGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAGCATAATAGCATGAATGCTTTGCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR GCA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTCTATAGATCACGTCTaGTATGATTTGTTACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIHVCLQSQLWETISLTISIDHV*YDLLPQ Trigger: TTGGGGTAACAAATCATAGCAGACGTGATCTATAGA...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR GCA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTAGCTTTTCTTTGAGTTaGCTTTTGTGCTTGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTISTMGDYKPNYLQWVISFSLS*LLCLKV Trigger: TACTTTCAAGCACAAAAGGCAACTCAAAGAAAAGCT...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR GCA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTATGCTGATACATGTTTaGTTACAATCTCAACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: STMGDYKPNYLQWVIVLIMLIHV*LQSQLW Trigger: CCATAGTTGAGATTGTAAGCAAACATGTATCAGCAT...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CCA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTGCACAGAAGGAAATCTaGCAAATCTTGTGTATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TSAMICYPKLSNCLLAYRAQKEI*QILCIL Trigger: TAGAATACACAAGATTTGCCAGATTTCCTTCTGTGC...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR GCA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTTATCATCTTTACTCTTaGCATAATGCTAAGACGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSAMICYPKLSNCLLAYRYHLYS*HNAKTQ Trigger: TTGCGTCTTAGCATTATGGCAAGAGTAAAGATGATA...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR GCA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTTCTGCAAAGCATTCATaGTATTATGCTGATACATGT | + |
|
Preference number: 4 (lower is better) Translates to: TSAMICYPKLSNCLLAYRSAKHS*YYADTC Trigger: ACATGTATCAGCATAATAGCATGAATGCTTTGCAGA...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 90 bp | TGGCTGCGCAGCTGTTCTGTCTCCTTGGTGTGGGTGCAGGCCTGCTaGCTCTGTAGCTCCAGCAGCTCCTTCTCGCGCGCCTGTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLRSCSVSLVWVQAC*LCSSSSSFSRACAW Trigger: CCAGGCACAGGCGCGCGAGAAGGAGCTGCTGGAGCTACAGAGCCAGCAGGCCTGCACCCACACCAAGGAGACAGAACAGCTGCGCAGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 90 bp | TTGAGGGTCTGCAGCTGGCTGCGCAGCTGTTCTGTCTCCTTGGTGTaGGTGCAGGCCTGCTGGCTCTGTAGCTCCAGCAGCTCCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRVCSWLRSCSVSLV*VQACWLCSSSSSFS Trigger: CGAGAAGGAGCTGCTGGAGCTACAGAGCCAGCAGGCCTGCACCCACACCAAGGAGACAGAACAGCTGCGCAGCCAGCTGCAGACCCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS GCA 90 bp | AGGCTGCTGTGTGTCTCCTCTGCCTTAGCTATCTGCTCCACAGCCTaGTGGTGCTGCTGCTTGAGGGTCTGCAGCTGGCTGCGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLLCVSSALAICSTA*WCCCLRVCSWLRSC Trigger: ACAGCTGCGCAGCCAGCTGCAGACCCTCAAGCAGCAGCACCAGCAGGCTGTGGAGCAGATAGCTAAGGCAGAGGAGACACACAGCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS GCA 90 bp | CTGTGTGTCTCCTCTGCCTTAGCTATCTGCTCCACAGCCTGCTGGTaGTGCTGCTTGAGGGTCTGCAGCTGGCTGCGCAGCTGTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LCVSSALAICSTACW*CCLRVCSWLRSCSV Trigger: GACAGAACAGCTGCGCAGCCAGCTGCAGACCCTCAAGCAGCAGCACCAGCAGGCTGTGGAGCAGATAGCTAAGGCAGAGGAGACACACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 90 bp | CGCTCCAGGGCCTCATCTGACCTCCGCTTCAGGATGCAGATGAGCTaGGACTGCTCTTCAATGCGGGAGCGAAGCATAGCCTTCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSRASSDLRFRMQMS*DCSSMRERSIAFSL Trigger: GAGCGAGAAGGCTATGCTTCGCTCCCGCATTGAAGAGCAGTCCCAGCTCATCTGCATCCTGAAGCGGAGGTCAGATGAGGCCCTGGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS GCA 90 bp | AGGGCCTCATCTGACCTCCGCTTCAGGATGCAGATGAGCTGGGACTaGTCTTCAATGCGGGAGCGAAGCATAGCCTTCTCGCTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RASSDLRFRMQMSWD*SSMRERSIAFSLLS Trigger: GGAGAGGAGCGAGAAGGCTATGCTTCGCTCCCGCATTGAAGAGCAGTCCCAGCTCATCTGCATCCTGAAGCGGAGGTCAGATGAGGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 90 bp | TGCATCATCTTCTCCTCCAGCTCTGCATTGAGCAGCTCTAGGATCTaGCAGCGCTCCAGGGCCTCATCTGACCTCCGCTTCAGGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CIIFSSSSALSSSRI*QRSRASSDLRFRMQ Trigger: CTGCATCCTGAAGCGGAGGTCAGATGAGGCCCTGGAGCGCTGCCAGATCCTAGAGCTGCTCAATGCAGAGCTGGAGGAGAAGATGATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS TCA 90 bp | CATCGTAGGCCTTCTGGATCCCATCTACTTTGCGCTGAAGCTCCCTaGCTCTCAAGTTGCTGTCCACAGCCACTGCCTCTTGCTCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: HRRPSGSHLLCAEAP*LSSCCPQPLPLAQT Trigger: GGTTTGAGCAAGAGGCAGTGGCTGTGGACAGCAACTTGAGAGTCAGGGAGCTTCAGCGCAAAGTAGATGGGATCCAGAAGGCCTACGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 90 bp | CGGACTGTGAGCTGTAATACTTTCGCCTCCTCATCCTTCAGAGCCTaGCTGAAGAGGCTGCTATTCTCCAGCCTCAGCTTCTCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTVSCNTFASSSFRA*LKRLLFSSLSFSFS Trigger: GGAGAATGAGAAGCTGAGGCTGGAGAATAGCAGCCTCTTCAGCCAGGCTCTGAAGGATGAGGAGGCGAAAGTATTACAGCTCACAGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGATGCTGGTGCTGCTGCTaGAGGGTCTGCAGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAIMLRRKYLNSELQARGCWCCC*RVCSWL Trigger: CAGCCAGCTGCAGACCCTCAAGCAGCAGCACCAGCA...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 90 bp | ATGTTCTCACTCTTGTATTCATCCTTGAAGCGGAGCATCAACTCGTaGTTGGCTGCTAGGGTCATAAAGCGTTCCTCTAGTTTCCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: MFSLLYSSLKRSINS*LAARVIKRSSSFRL Trigger: CAGTCGGAAACTAGAGGAACGCTTTATGACCCTAGCAGCCAACCACGAGTTGATGCTCCGCTTCAAGGATGAATACAAGAGTGAGAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS GCA 90 bp | GTCTTCATTTGCTATCTCCAACTTTTCCTCAAGCTGGCAGATCTCTaGCTGTTTGTTCTGAAGCACTTTGCCCCTTTCAATGGACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VFICYLQLFLKLADL*LFVLKHFAPFNGQL Trigger: CAGCTGTCCATTGAAAGGGGCAAAGTGCTTCAGAACAAACAGGCAGAGATCTGCCAGCTTGAGGAAAAGTTGGAGATAGCAAATGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTACAGTCCCCGGAGGTTaGCCAAGGCTTCCCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: STMGDYKPNYLQWVIVLITVPGG*PRLPSD Trigger: GTCTGAGGGAAGCCTTGGCAAACCTCCGGGGACTGT...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTAGCTGTTCTGTCTCCTaGGTGTGGGTGCAGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: STMGDYKPNYLQWVIVLISCSVS*VWVQAC Trigger: GCAGGCCTGCACCCACACCAAGGAGACAGAACAGCT...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTTCCTCCAGCTCTGCATaGAGCAGCTCTAGGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: STMGDYKPNYLQWVIVLISSSSA*SSSRIW Trigger: CCAGATCCTAGAGCTGCTCAATGCAGAGCTGGAGGA...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | CTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATTGCAGGCCAGAGGACTCTTGTATTCATCCTaGAAGCGGAGCATCAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LAIMLRRKYLNSELQARGLLYSS*KRSINS Trigger: CGAGTTGATGCTCCGCTTCAAGGATGAATACAAGAG...TCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | CTGATACATGTTTGCTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCGAGAGATGGCGGAGTTaGCCATTGAGTTCTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LIHVCLQSQLWETISLTIERWRS*PLSSLS Trigger: GGAGAGAGAACTCAATGGCAAACTCCGCCATCTCTC...GATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAGCAAACATGTATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | CTTACAATCTCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTAGCATCAACTCGTGGTaGGCTGCTAGGGTCATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTISTMGDYKPNYLQWVISINSW*AARVIK Trigger: CTTTATGACCCTAGCAGCCAACCACGAGTTGATGCT...AATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGAGATTGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS TCA 90 bp | CATCTTTACTCTTGCCATAATGCTAAGACGCAAATATTTGAATTCTaGATTGCAGGCCAGAGGAAGCAGAAACTTCCCTATGGAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HLYSCHNAKTQIFEF*IAGQRKQKLPYGER Trigger: TCTCTCTCCATAGGGAAGTTTCTGCTTCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAGAGTAAAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTTGGCGGAGTTTGCCATaGAGTTCTCTCTCCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSAMICYPKLSNCLLAYRWRSLP*SSLSLL Trigger: AAGCAAGGAGAGAGAACTCAATGGCAAACTCCGCCA...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTTTCTCCTCCCTCAGCTaGATGTTCTCACTCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: STMGDYKPNYLQWVIVLIFSSLS*MFSLLY Trigger: ATACAAGAGTGAGAACATCAAGCTGAGGGAGGAGAA...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTTTGAGTTCTCTCTCCTaGCTTAAAAGATCCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: STMGDYKPNYLQWVIVLILSSLS*LKRSKL Trigger: CAGCTTGGATCTTTTAAGCAAGGAGAGAGAACTCAA...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTTTGATGTTCTCACTCTaGTATTCATCCTTGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TSAMICYPKLSNCLLAYRLMFSL*YSSLKR Trigger: CCGCTTCAAGGATGAATACAAGAGTGAGAACATCAA...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | ACGTCTGCTATGATTTGTTACCCCAAATTGTCTAATTGTCTATTAGCATATCGTTATTTGAATTCTGAATaGCAGGCCAGAGGAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TSAMICYPKLSNCLLAYRYLNSE*QARGSR Trigger: TCTGCTTCCTCTGGCCTGCAATTCAGAATTCAAATA...ACGATATGCTAATAGACAATTAGACAATTTGGGGTAACAAATCATAGCAGACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS-3UTR CAA 90 bp | TCAACTATGGGAGACTATAAGCCTAACTATCTACAGTGGGTAATTGTGCTAATTGAAATCTGGCAAATCTaGTGTATTCTAGGTGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: STMGDYKPNYLQWVIVLIEIWQI*CILGVE Trigger: TTCTACACCTAGAATACACAAGATTTGCCAGATTTC...AATTAGCACAATTACCCACTGTAGATAGTTAGGCTTATAGTCTCCCATAGTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 72 bp | TGCAGCTGGCTGCGCAGCTGTTCTGTCTCCTTGGTGTaGGTGCAGGCCTGCTGGCTCTGTAGCTCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CSWLRSCSVSLV*VQACWLCSSSS Trigger: GCTGCTGGAGCTACAGAGCCAGCAGGCCTGCACCCACACCAAGGAGACAGAACAGCTGCGCAGCCAGCTGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS TCA 72 bp | AGCTCCTTCTCGCGCGCCTGTGCCTGGCAGGCATCCTaGGCACACCTCTCCTTCAGCGTTTCTAGCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSFSRACAWQAS*AHLSFSVSSSP Trigger: TGGGGAGCTAGAAACGCTGAAGGAGAGGTGTGCTCAGGATGCCTGCCAGGCACAGGCGCGCGAGAAGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS GCA 72 bp | TGTGTCTCCTCTGCCTTAGCTATCTGCTCCACAGCCTaGTGGTGCTGCTGCTTGAGGGTCTGCAGCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CVSSALAICSTA*WCCCLRVCSWL Trigger: CAGCCAGCTGCAGACCCTCAAGCAGCAGCACCAGCAGGCTGTGGAGCAGATAGCTAAGGCAGAGGAGACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 72 bp | TTCTCCTCCAGCTCTGCATTGAGCAGCTCTAGGATCTaGCAGCGCTCCAGGGCCTCATCTGACCTCCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSSSSALSSSRI*QRSRASSDLRF Trigger: GAAGCGGAGGTCAGATGAGGCCCTGGAGCGCTGCCAGATCCTAGAGCTGCTCAATGCAGAGCTGGAGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 72 bp | GCCTCATCTGACCTCCGCTTCAGGATGCAGATGAGCTaGGACTGCTCTTCAATGCGGGAGCGAAGCATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASSDLRFRMQMS*DCSSMRERSIA Trigger: GGCTATGCTTCGCTCCCGCATTGAAGAGCAGTCCCAGCTCATCTGCATCCTGAAGCGGAGGTCAGATGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS TCA 72 bp | CCTTCTGGATCCCATCTACTTTGCGCTGAAGCTCCCTaGCTCTCAAGTTGCTGTCCACAGCCACTGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSGSHLLCAEAP*LSSCCPQPLPL Trigger: AAGAGGCAGTGGCTGTGGACAGCAACTTGAGAGTCAGGGAGCTTCAGCGCAAAGTAGATGGGATCCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 72 bp | AGCTGTAATACTTTCGCCTCCTCATCCTTCAGAGCCTaGCTGAAGAGGCTGCTATTCTCCAGCCTCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SCNTFASSSFRA*LKRLLFSSLSF Trigger: GAAGCTGAGGCTGGAGAATAGCAGCCTCTTCAGCCAGGCTCTGAAGGATGAGGAGGCGAAAGTATTACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS TCA 72 bp | GTAATACTTTCGCCTCCTCATCCTTCAGAGCCTGGCTaGAGAGGCTGCTATTCTCCAGCCTCAGCTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VILSPPHPSEPG*RGCYSPASASH Trigger: ATGAGAAGCTGAGGCTGGAGAATAGCAGCCTCTTCAGCCAGGCTCTGAAGGATGAGGAGGCGAAAGTATTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 72 bp | CTGAATTGCAGGCCAGAGGAAGCAGAAACTTCCCTATaGAGAGAGATGGCGGAGTTTGCCATTGAGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LNCRPEEAETSL*REMAEFAIEFS Trigger: AGAGAACTCAATGGCAAACTCCGCCATCTCTCTCCATAGGGAAGTTTCTGCTTCCTCTGGCCTGCAATTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CAA 72 bp | TCCCTCAGCTTGATGTTCTCACTCTTGTATTCATCCTaGAAGCGGAGCATCAACTCGTGGTTGGCTGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSLMFSLLYSS*KRSINSWLAAR Trigger: CCTAGCAGCCAACCACGAGTTGATGCTCCGCTTCAAGGATGAATACAAGAGTGAGAACATCAAGCTGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CCA 72 bp | CTCTTGTATTCATCCTTGAAGCGGAGCATCAACTCGTaGTTGGCTGCTAGGGTCATAAAGCGTTCCTCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLYSSLKRSINS*LAARVIKRSSS Trigger: ACTAGAGGAACGCTTTATGACCCTAGCAGCCAACCACGAGTTGATGCTCCGCTTCAAGGATGAATACAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CAA 90 bp | TTCTCACTCTTGTATTCATCCTTGAAGCGGAGCATCAACTCGTGGTaGGCTGCTAGGGTCATAAAGCGTTCCTCTAGTTTCCGACTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: FSLLYSSLKRSINSW*AARVIKRSSSFRLY Trigger: GTACAGTCGGAAACTAGAGGAACGCTTTATGACCCTAGCAGCCAACCACGAGTTGATGCTCCGCTTCAAGGATGAATACAAGAGTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
||
| CDS CAA 90 bp | CCCTATGGAGAGAGATGGCGGAGTTTGCCATTGAGTTCTCTCTCCTaGCTTAAAAGATCCAAGCTGTGCTTTTTGAAGGCTTCAGACTGC | + |
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Preference number: 6 (lower is better) Translates to: PYGERWRSLPLSSLS*LKRSKLCFLKASDC Trigger: GCAGTCTGAAGCCTTCAAAAAGCACAGCTTGGATCTTTTAAGCAAGGAGAGAGAACTCAATGGCAAACTCCGCCATCTCTCTCCATAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS CAA 72 bp | TTGTATTCATCCTTGAAGCGGAGCATCAACTCGTGGTaGGCTGCTAGGGTCATAAAGCGTTCCTCTAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LYSSLKRSINSW*AARVIKRSSSF Trigger: GAAACTAGAGGAACGCTTTATGACCCTAGCAGCCAACCACGAGTTGATGCTCCGCTTCAAGGATGAATACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS CAA 90 bp | AGGAAGCAGAAACTTCCCTATGGAGAGAGATGGCGGAGTTTGCCATaGAGTTCTCTCTCCTTGCTTAAAAGATCCAAGCTGTGCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: RKQKLPYGERWRSLP*SSLSLLKRSKLCFL Trigger: CAAAAAGCACAGCTTGGATCTTTTAAGCAAGGAGAGAGAACTCAATGGCAAACTCCGCCATCTCTCTCCATAGGGAAGTTTCTGCTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS TCA 72 bp | AACTTCCCTATGGAGAGAGATGGCGGAGTTTGCCATTaGGTTCTCTCTCCTTGCTTAAAAGATCCAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: NFPMERDGGVCH*VLSPCLKDPSC Trigger: ACAGCTTGGATCTTTTAAGCAAGGAGAGAGAACTCAATGGCAAACTCCGCCATCTCTCTCCATAGGGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS GCA 72 bp | TGCTATCTCCAACTTTTCCTCAAGCTGGCAGATCTCTaGCTGTTTGTTCTGAAGCACTTTGCCCCTTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: CYLQLFLKLADL*LFVLKHFAPFN Trigger: ATTGAAAGGGGCAAAGTGCTTCAGAACAAACAGGCAGAGATCTGCCAGCTTGAGGAAAAGTTGGAGATAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS CAA 72 bp | GAGAGATGGCGGAGTTTGCCATTGAGTTCTCTCTCCTaGCTTAAAAGATCCAAGCTGTGCTTTTTGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ERWRSLPLSSLS*LKRSKLCFLKA Trigger: AGCCTTCAAAAAGCACAGCTTGGATCTTTTAAGCAAGGAGAGAGAACTCAATGGCAAACTCCGCCATCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS CAA 72 bp | GCCATAATGCTAAGACGCAAATATTTGAATTCTGAATaGCAGGCCAGAGGAAGCAGAAACTTCCCTATGGAG | + |
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Preference number: 6 (lower is better) Translates to: AIMLRRKYLNSE*QARGSRNFPME Trigger: CTCCATAGGGAAGTTTCTGCTTCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS CAA 90 bp | TTTACTCTTGCCATAATGCTAAGACGCAAATATTTGAATTCTGAATaGCAGGCCAGAGGAAGCAGAAACTTCCCTATGGAGAGAGATGGC | + |
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Preference number: 6 (lower is better) Translates to: FTLAIMLRRKYLNSE*QARGSRNFPMERDG Trigger: GCCATCTCTCTCCATAGGGAAGTTTCTGCTTCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAGAGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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| CDS TCA 72 bp | TCTTGCCATAATGCTAAGACGCAAATATTTGAATTCTaGATTGCAGGCCAGAGGAAGCAGAAACTTCCCTAT | + |
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Preference number: 6 (lower is better) Translates to: SCHNAKTQIFEF*IAGQRKQKLPY Trigger: ATAGGGAAGTTTCTGCTTCCTCTGGCCTGCAATTCAGAATTCAAATATTTGCGTCTTAGCATTATGGCAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316398.5 |
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