Pregenerated sensors for CCDC83 (Homo sapiens)
Ensembl gene IDs: ENSG00000150676Ensembl transcript IDs: ENST00000280245.8, ENST00000342404.8, ENST00000526729.1, ENST00000529676.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCAGCGTGCTTCCGTTTTaGTCACTCATACCATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: NYGELACIIDWLSITLSISVLPF*SLIPCK Trigger: CTTGCATGGTATGAGTGACCAAAACGGAAGCACGCT...GATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| 3UTR-3UTR CAA 90 bp | TATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACACCTCAGAGACTACCTaGAACCCACTGTCATGCTTC | + |
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Preference number: 3 (lower is better) Translates to: YRLAVYHIEHPQRERCVDTSETT*NPLSCF Trigger: GAAGCATGACAGTGGGTTCAAGGTAGTCTCTGAGGT...GTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| 3UTR TCA 72 bp | ACCTCAGAGACTACCTTGAACCCACTGTCATGCTTCTaGATACTTCAGTGTAGAAATACAAAGCGTGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: TSETTLNPLSCF*ILQCRNTKRAS Trigger: GGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTGGGTTCAAGGTAGTCTCTGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| 3UTR CCA 72 bp | GGGTTAAACTACGGAGAATTGGCTTGCATTATAGACTaGCTGTCTATCACATTGAGCATCCTCAGAGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: GLNYGELACIID*LSITLSILRGK Trigger: TTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| 3UTR-3UTR CAA 90 bp | CATCCTCAGAGGGAAAGATGTGTAGACAATGCTATGCAAACTTCTAAGTTTTTCAAGCGTGCTTCCGTTTaGGTCACTCATACCATGCAA | + |
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Preference number: 3 (lower is better) Translates to: HPQRERCVDNAMQTSKFFKRASV*VTHTMQ Trigger: TTGCATGGTATGAGTGACCAAAACGGAAGCACGCTT...GAAAAACTTAGAAGTTTGCATAGCATTGTCTACACATCTTTCCCTCTGAGGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | CTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTGCGCGACCCCCAGGCTaGTCTCGAAGCGGCGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LRRIGLHYRLAVYHIEHPARPPG*SRSGAS Trigger: GCTTGCGCCGCTTCGAGATCAGCCTGGGGGTCGCGC...AGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR GCA 90 bp | AACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCGCCTACCGGCTCCACTaGAGCGGCTGCTGCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: NYGELACIIDWLSITLSIAYRLH*SGCCAL Trigger: CAGGGCGCAGCAGCCGCTGCAGTGGAGCCGGTAGGC...GATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR GCA 90 bp | TATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACATCCCCTCCACAGCCTaGAGGGGCGGATACCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: YRLAVYHIEHPQRERCVDIPSTA*RGGYPA Trigger: GGCCGGGTATCCGCCCCTGCAGGCTGTGGAGGGGAT...GTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR CCA 90 bp | CTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTGCGGATACCCGGCCCTaGGCGGACAGCTCGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LRRIGLHYRLAVYHIEHPADTRP*ADSSHF Trigger: GAAGTGCGAGCTGTCCGCCCAGGGCCGGGTATCCGC...AGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR CCA 90 bp | TATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACCAGGCCCGTGGAGAGTaGAGCCCGTGGAGGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: YRLAVYHIEHPQRERCVDQARGE*SPWRVV Trigger: GACCACCCTCCACGGGCTCCACTCTCCACGGGCCTG...GTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR CCA 90 bp | TTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAAGGCAAGCCCAGGCCCGTaGAGAGTGGAGCCCGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FSVEIQSVLPFWSLIPCKASPGP*RVEPVE Trigger: CTCCACGGGCTCCACTCTCCACGGGCCTGGGCTTGC...CTTGCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR CCA 90 bp | TACACAGGGTTAAACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCAAGAACGGCGCTTCGTaGACAAGACCAGGAGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: YTGLNYGELACIIDWLSIKNGAS*TRPGGR Trigger: GCGCCCTCCTGGTCTTGTCCACGAAGCGCCGTTCTT...GATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAACCCTGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR CCA 90 bp | ACCCACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGCTCCTTCTCATCTCCTaGGTGGAGAAGAGGAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: THCHASEYFSVEIQSVLPLLLIS*VEKRSG Trigger: CCCACTCCTCTTCTCCACCCAGGAGATGAGAAGGAG...CGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CCA 90 bp | TACACAGGGTTAAACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCTCTTCAGTGTCAGACTaGAAGGAGTCGGGGGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: YTGLNYGELACIIDWLSISSVSD*KESGAK Trigger: CTTGGCCCCCGACTCCTTCCAGTCTGACACTGAAGA...GATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAACCCTGTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR CCA 90 bp | AACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTCCTTCTCATCTCCTaGGTGGAGAAGAGGAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NYGELACIIDWLSITLSILLLIS*VEKRSG Trigger: CCCACTCCTCTTCTCCACCCAGGAGATGAGAAGGAG...GATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | TATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACCCTCAGAGACTACCTTaGACCCACTGTCATGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: YRLAVYHIEHPQRERCVDPQRLP*THCHAS Trigger: AGAAGCATGACAGTGGGTTCAAGGTAGTCTCTGAGG...GTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | GCTGGTTTAAAAATGAGCCAAAGTGTAAGTAAAATGGGCAACGGATATACTTCAGGCAGCAGCAGCAGATaGCGAGGATTAGAGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: AGLKMSQSVSKMGNGYTSGSSSR*RGLEVG Trigger: TCCCACCTCTAATCCTCGTCATCTGCTGCTGCTGCC...TGAAGTATATCCGTTGCCCATTTTACTTACACTTTGGCTCATTTTTAAACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR TCA 90 bp | TTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAAGGGCTGTCTATCACATTaGGCATCCTCAGAGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: FSVEIQSVLPFWSLIPCKGCLSH*ASSEGK Trigger: CTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCC...CTTGCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | TACACAGGGTTAAACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCGTCGCCTGGGTATCTTaGGATCCACAAGTCTACAGT | + |
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Preference number: 4 (lower is better) Translates to: YTGLNYGELACIIDWLSIVAWVS*DPQVYS Trigger: ACTGTAGACTTGTGGATCTCAAGATACCCAGGCGAC...GATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAACCCTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342404.8 |
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| CDS-3UTR GCA 90 bp | CTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTCAGATTAAAAAGGCCTaGCCTCCTTCTCATCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LRRIGLHYRLAVYHIEHPQIKKA*PPSHLL Trigger: CAGGAGATGAGAAGGAGGGCAGGCCTTTTTAATCTG...AGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR GCA 90 bp | AGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACAATAACTGGCAATCCCTCTaGCTTCTCTTCACTCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RLAVYHIEHPQRERCVDNNWQSL*LLFTQF Trigger: GAACTGAGTGAAGAGAAGGCAGAGGGATTGCCAGTT...ATTGTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR GCA 90 bp | CTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTAACTGGCAATCCCTCTaGCTTCTCTTCACTCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LRRIGLHYRLAVYHIEHPNWQSL*LLFTQF Trigger: GAACTGAGTGAAGAGAAGGCAGAGGGATTGCCAGTT...AGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CCA 90 bp | CTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTCGCAAGGCGGAGAGATaGGTTAACATTCTGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: LRRIGLHYRLAVYHIEHPRKAER*VNILIR Trigger: TCTGATCAGAATGTTAACCCATCTCTCCGCCTTGCG...AGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CCA 90 bp | TTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTCGCCAGCAACGCCTaGCAGAGATTAGACATGATT | + |
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Preference number: 4 (lower is better) Translates to: LHYRLAVYHIEHPQRERCVASNA*QRLDMI Trigger: AATCATGTCTAATCTCTGCCAGGCGTTGCTGGCGAC...ACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR CCA 90 bp | AGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACAATTCTAGTCCAGCAGCTTaGGTAAGATATAGTCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RLAVYHIEHPQRERCVDNSSPAA*VRYSRQ Trigger: CTGGCGACTATATCTTACCCAAGCTGCTGGACTAGA...ATTGTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS-3UTR CCA 90 bp | AGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACAATAGCGTGCTTCCGTTTTaGTCACTCATACCATGCAAG | + |
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Preference number: 4 (lower is better) Translates to: RLAVYHIEHPQRERCVDNSVLPF*SLIPCK Trigger: CTTGCATGGTATGAGTGACCAAAACGGAAGCACGCT...ATTGTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR GCA 90 bp | TTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTCAGATTAAAAAGGCCTaGCCTCCTTCTCATCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LHYRLAVYHIEHPQRERCQIKKA*PPSHLL Trigger: CAGGAGATGAGAAGGAGGGCAGGCCTTTTTAATCTG...ACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CCA 90 bp | CATCCTCAGAGGGAAAGATGTGTAGACAATGCTATGCAAACTTCTAAGTTTTTCTTCTCATCTCCTGGGTaGAGAAGAGGAGTGGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: HPQRERCVDNAMQTSKFFFSSPG*RRGVGL Trigger: TAGGCCCACTCCTCTTCTCCACCCAGGAGATGAGAA...GAAAAACTTAGAAGTTTGCATAGCATTGTCTACACATCTTTCCCTCTGAGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CCA 90 bp | AACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTCTCTTGTTACAACTaGCAATCCCTCTGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: NYGELACIIDWLSITLSILSCYN*QSLCLL Trigger: GAGAAGGCAGAGGGATTGCCAGTTGTAACAAGAGAG...GATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CCA 90 bp | TTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTAGCGTGCTTCCGTTTTaGTCACTCATACCATGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LHYRLAVYHIEHPQRERCSVLPF*SLIPCK Trigger: CTTGCATGGTATGAGTGACCAAAACGGAAGCACGCT...ACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CCA 90 bp | TACACAGGGTTAAACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCTCTAGTCCAGCAGCTTaGGTAAGATATAGTCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: YTGLNYGELACIIDWLSISSPAA*VRYSRL Trigger: CAGGCGACTATATCTTACCCAAGCTGCTGGACTAGA...GATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAACCCTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | TACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAACTGCCCTTGTCAATaGGCTTTACAGCATTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: YFSVEIQSVLPFWSLIPCNCPCQ*ALQHSV Trigger: CACAGAATGCTGTAAAGCTCATTGACAAGGGCAGTT...GCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACACTGAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | TTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAAGAACTGCCCTTGTCAATaGGCTTTACAGCATTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: FSVEIQSVLPFWSLIPCKNCPCQ*ALQHSV Trigger: CACAGAATGCTGTAAAGCTCATTGACAAGGGCAGTT...CTTGCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | TTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAAGTCATCATCTTATATGTaGTGTGGCTTTCTGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSVEIQSVLPFWSLIPCKSSSYM*CGFLGS Trigger: GGAGCCCAGAAAGCCACATCACATATAAGATGATGA...CTTGCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | AACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCTCATCATCTTATATGTaGTGTGGCTTTCTGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NYGELACIIDWLSITLSISSSYM*CGFLGS Trigger: GGAGCCCAGAAAGCCACATCACATATAAGATGATGA...GATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | TGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAAGTAAATGGCTGTCTATCACATTaGGCATCCTCAGAGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: CRNTKRASVLVTHTMQVNGCLSH*ASSEGK Trigger: CTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCC...ATTTACTTGCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR GCA 90 bp | TATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACTACGGAGAATTGGCTTaGATTATAGACTGGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: YRLAVYHIEHPQRERCVDYGELA*IIDWLS Trigger: AGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTA...GTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR GCA 90 bp | ACCCACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTACGGAGAATTGGCTTaGATTATAGACTGGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: THCHASEYFSVEIQSVLPYGELA*IIDWLS Trigger: AGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTA...CGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CCA 90 bp | TATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACGCCCATTCCTTCTTTTaGTCCAGTTGCAACAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: YRLAVYHIEHPQRERCVDAHSFF*SSCNKV Trigger: AACTTTGTTGCAACTGGACCAAAAGAAGGAATGGGC...GTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CCA 90 bp | TATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACGCTTGCATTATAGACTaGCTGTCTATCACATTGAGC | + |
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Preference number: 4 (lower is better) Translates to: YRLAVYHIEHPQRERCVDACIID*LSITLS Trigger: GCTCAATGTGATAGACAGCCAGTCTATAATGCAAGC...GTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | ACCCACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTGTGGGTTGCAATTCTaGCTTCTCTTCTATATGTGT | + |
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Preference number: 4 (lower is better) Translates to: THCHASEYFSVEIQSVLPCGLQF*LLFYMC Trigger: ACACATATAGAAGAGAAGTCAGAATTGCAACCCACA...CGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | ACCCACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGCCACTGTCATGCTTCTaGATACTTCAGTGTAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: THCHASEYFSVEIQSVLPPLSCF*ILQCRN Trigger: ATTTCTACACTGAAGTATTCAGAAGCATGACAGTGG...CGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR TCA 90 bp | TTAAAAATGAGCCAAAGTGTAAGTAAAATGGGCAACGGATATACTTCAGTTCCCCCTCAGAGACTACCTTaGACCCACTGTCATGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LKMSQSVSKMGNGYTSVPPQRLP*THCHAS Trigger: AGAAGCATGACAGTGGGTTCAAGGTAGTCTCTGAGG...GGGAACTGAAGTATATCCGTTGCCCATTTTACTTACACTTTGGCTCATTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR GCA 90 bp | AACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCATCAAATTCAGAGCCTaGCTTTCGAGAGGGCAAATA | + |
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Preference number: 4 (lower is better) Translates to: NYGELACIIDWLSITLSIIKFRA*LSRGQI Trigger: TATTTGCCCTCTCGAAAGGCAGGCTCTGAATTTGAT...GATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CCA 90 bp | CATCCTCAGAGGGAAAGATGTGTAGACAATGCTATGCAAACTTCTAAGTTTTTCCTCTCTTGTTACAACTaGCAATCCCTCTGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPQRERCVDNAMQTSKFFLSCYN*QSLCLL Trigger: GAGAAGGCAGAGGGATTGCCAGTTGTAACAAGAGAG...GAAAAACTTAGAAGTTTGCATAGCATTGTCTACACATCTTTCCCTCTGAGGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CCA 90 bp | AACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCTGTGATGTGGCTTTCTaGGCTCCTGACATCTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: NYGELACIIDWLSITLSICDVAF*APDIFI Trigger: TATAAAGATGTCAGGAGCCCAGAAAGCCACATCACA...GATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR TCA 90 bp | ACCCACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGATGAAGAAATATACCTaGATCAAATTCAGAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: THCHASEYFSVEIQSVLPMKKYT*IKFRAC Trigger: GCAGGCTCTGAATTTGATTCAGGTATATTTCTTCAT...CGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR TCA 90 bp | AGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACAATTCTTTATTTGAAACATaGATTGCTCCACGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLAVYHIEHPQRERCVDNSLFET*IAPRHL Trigger: AAGATGCCGTGGAGCAATTCATGTTTCAAATAAAGA...ATTGTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR GCA 90 bp | TATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACAGTAGATGCCGTATGTaGCAAATCTGTTCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YRLAVYHIEHPQRERCVDSRCRM*QICSSF Trigger: AAAAGAAGAACAGATTTGGCACATACGGCATCTACT...GTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR GCA 90 bp | AGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACAATAGTAGATGCCGTATGTaGCAAATCTGTTCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLAVYHIEHPQRERCVDNSRCRM*QICSSF Trigger: AAAAGAAGAACAGATTTGGCACATACGGCATCTACT...ATTGTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR GCA 90 bp | ACCCACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGAAGCACCAAATTTTCTaGTTCCAGTTCATGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: THCHASEYFSVEIQSVLPKHQIF*FQFMNS Trigger: GCTATTCATGAACTGGAAGCAGAAAATTTGGTGCTT...CGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTTTAAAAATGAGCCAAAGTGTAAGTAAAATGGGCAACGGATATACTTCACGCAAGGCGGAGAGATaGGTTAACATTCTGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKMSQSVSKMGNGYTSRKAER*VNILIR Trigger: TCTGATCAGAATGTTAACCCATCTCTCCGCCTTGCG...TGAAGTATATCCGTTGCCCATTTTACTTACACTTTGGCTCATTTTTAAACCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTGCCCATTCCTTCTTTTaGTCCAGTTGCAACAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HCHASEYFSVEIQSVLPFAHSFF*SSCNKV Trigger: AACTTTGTTGCAACTGGACCAAAAGAAGGAATGGGC...AAACGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTGCTTGCATTATAGACTaGCTGTCTATCACATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCHASEYFSVEIQSVLPFACIID*LSITLS Trigger: GCTCAATGTGATAGACAGCCAGTCTATAATGCAAGC...AAACGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR TCA 90 bp | TACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCATGAAGAAATATACCTaGATCAAATTCAGAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YFSVEIQSVLPFWSLIPCMKKYT*IKFRAC Trigger: GCAGGCTCTGAATTTGATTCAGGTATATTTCTTCAT...GCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACACTGAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAAATGAGCCAAAGTGTAAGTAAAATGGGCAACGGATATACTTCAGTTCCCGATACCTGGGTATCTTaGGATCCACAAGTCTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKMSQSVSKMGNGYTSVPDTWVS*DPQVYS Trigger: ACTGTAGACTTGTGGATCTCAAGATACCCAGGTATC...GGGAACTGAAGTATATCCGTTGCCCATTTTACTTACACTTTGGCTCATTTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280245.8 |
||
| CDS-3UTR GCA 90 bp | CACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTAGTTCCTTTAGTAGATaGCGTATGTGCCAAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HCHASEYFSVEIQSVLPFSSFSR*RMCQIC Trigger: ACAGATTTGGCACATACGGCATCTACTAAAGGAACT...AAACGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CCA 90 bp | TACACAGGGTTAAACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCTTTAATTTCTTTTGGTaGCCCGTCATGTGTATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTGLNYGELACIIDWLSIFNFFW*PVMCIL Trigger: AAGGATACACATGACGGGCCACCAAAAGAAATTAAA...GATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAACCCTGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAAGTAAATTGTGATGTGGCTTTCTaGGCTCCTGACATCTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: CRNTKRASVLVTHTMQVNCDVAF*APDIFI Trigger: TATAAAGATGTCAGGAGCCCAGAAAGCCACATCACA...ATTTACTTGCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| 3UTR CAA 72 bp | AGACTAATACACAGGGTTAAACTACGGAGAATTGGCTaGCATTATAGACTGGCTGTCTATCACATTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLIHRVKLRRIG*HYRLAVYHIEH Trigger: ATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAACCCTGTGTATTAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAAGTAAATTGTGGGTTGCAATTCTaGCTTCTCTTCTATATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CRNTKRASVLVTHTMQVNCGLQF*LLFYMC Trigger: ACACATATAGAAGAGAAGTCAGAATTGCAACCCACA...ATTTACTTGCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR TCA 90 bp | CATCCTCAGAGGGAAAGATGTGTAGACAATGCTATGCAAACTTCTAAGTTTTTCCCACTGTCATGCTTCTaGATACTTCAGTGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HPQRERCVDNAMQTSKFFPLSCF*ILQCRN Trigger: ATTTCTACACTGAAGTATTCAGAAGCATGACAGTGG...GAAAAACTTAGAAGTTTGCATAGCATTGTCTACACATCTTTCCCTCTGAGGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR GCA 90 bp | CATCCTCAGAGGGAAAGATGTGTAGACAATGCTATGCAAACTTCTAAGTTTTTCAGTTCCTTTAGTAGATaGCGTATGTGCCAAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HPQRERCVDNAMQTSKFFSSFSR*RMCQIC Trigger: ACAGATTTGGCACATACGGCATCTACTAAAGGAACT...GAAAAACTTAGAAGTTTGCATAGCATTGTCTACACATCTTTCCCTCTGAGGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR GCA 90 bp | CACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTAAGCACCAAATTTTCTaGTTCCAGTTCATGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCHASEYFSVEIQSVLPFKHQIF*FQFMNS Trigger: GCTATTCATGAACTGGAAGCAGAAAATTTGGTGCTT...AAACGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CCA 90 bp | AACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCTCTATCTTCACATACTaGAGATCTTCGATGCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: NYGELACIIDWLSITLSISIFTY*RSSMLF Trigger: AAATAGCATCGAAGATCTCCAGTATGTGAAGATAGA...GATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CCA 90 bp | CATCCTCAGAGGGAAAGATGTGTAGACAATGCTATGCAAACTTCTAAGTTTTTCTTTAATTTCTTTTGGTaGCCCGTCATGTGTATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPQRERCVDNAMQTSKFFFNFFW*PVMCIL Trigger: AAGGATACACATGACGGGCCACCAAAAGAAATTAAA...GAAAAACTTAGAAGTTTGCATAGCATTGTCTACACATCTTTCCCTCTGAGGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAAATGAGCCAAAGTGTAAGTAAAATGGGCAACGGATATACTTCAGTTCCCTCTTTATTTGAAACATaGATTGCTCCACGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKMSQSVSKMGNGYTSVPSLFET*IAPRHL Trigger: AAGATGCCGTGGAGCAATTCATGTTTCAAATAAAGA...GGGAACTGAAGTATATCCGTTGCCCATTTTACTTACACTTTGGCTCATTTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS TCA 90 bp | GAACGGCGCTTCGTGGACAAGACCAGGAGGGCGCGACCCCCAGGCTaGTCTCGAAGCGGCGCAAGCCCAGGCCCGTGGAGAGTGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ERRFVDKTRRARPPG*SRSGASPGPWRVEP Trigger: GGGCTCCACTCTCCACGGGCCTGGGCTTGCGCCGCTTCGAGATCAGCCTGGGGGTCGCGCCCTCCTGGTCTTGTCCACGAAGCGCCGTTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280245.8 |
||
| CDS CCA 90 bp | AACATTCTGATCAGATTAAAAAGGCCTGCCCTCCTTCTCATCTCCTaGGTGGAGAAGAGGAGTGGGCCTATCAGAGCCCTTCCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NILIRLKRPALLLIS*VEKRSGPIRALPSS Trigger: GCTGCTGGGAAGGGCTCTGATAGGCCCACTCCTCTTCTCCACCCAGGAGATGAGAAGGAGGGCAGGCCTTTTTAATCTGATCAGAATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | AGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACAATGGCCCATTCCTTCTTTaGGTCCAGTTGCAACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RLAVYHIEHPQRERCVDNGPFLL*VQLQQS Trigger: ACTTTGTTGCAACTGGACCAAAAGAAGGAATGGGCC...ATTGTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | ACCCACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGAAGCGTGCTTCCGTTTaGGTCACTCATACCATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: THCHASEYFSVEIQSVLPKRASV*VTHTMQ Trigger: TTGCATGGTATGAGTGACCAAAACGGAAGCACGCTT...CGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | TATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACAAGCGTGCTTCCGTTTaGGTCACTCATACCATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YRLAVYHIEHPQRERCVDKRASV*VTHTMQ Trigger: TTGCATGGTATGAGTGACCAAAACGGAAGCACGCTT...GTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | TACACAGGGTTAAACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACCTCAGAGACTACCTaGAACCCACTGTCATGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YTGLNYGELACIIDWLSITSETT*NPLSCF Trigger: GAAGCATGACAGTGGGTTCAAGGTAGTCTCTGAGGT...GATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAACCCTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | CTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTCTACGGAGAATTGGCTaGCATTATAGACTGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRRIGLHYRLAVYHIEHPLRRIG*HYRLAV Trigger: GACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAG...AGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | TATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACTCACTCCCTACATTCTaGTACTCCTCCCAATATTCC | + |
|
Preference number: 5 (lower is better) Translates to: YRLAVYHIEHPQRERCVDSLPTF*YSSQYS Trigger: GGAATATTGGGAGGAGTACAAGAATGTAGGGAGTGA...GTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | TACACAGGGTTAAACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCGGCCCATTCCTTCTTTaGGTCCAGTTGCAACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YTGLNYGELACIIDWLSIGPFLL*VQLQQS Trigger: ACTTTGTTGCAACTGGACCAAAAGAAGGAATGGGCC...GATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAACCCTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | AGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTGTAGACAATATTGCAACCTCTTTTTaGAGCCAGTCATTCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLAVYHIEHPQRERCVDNIATSF*SQSFSQ Trigger: CTGGGAGAATGACTGGCTCAAAAAAGAGGTTGCAAT...ATTGTCTACACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | AACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCGGATACCTGGGTATCTaGAGATCCACAAGTCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: NYGELACIIDWLSITLSIGYLGI*RSTSLQ Trigger: CTGTAGACTTGTGGATCTCAAGATACCCAGGTATCC...GATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280245.8 |
||
| CDS-3UTR CAA 90 bp | TACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCCTACGGAGAATTGGCTaGCATTATAGACTGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YFSVEIQSVLPFWSLIPCLRRIG*HYRLAV Trigger: GACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAG...GCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACACTGAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | CACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTAGTCGCCTGGGTATCTaGAGATCCACAAGTCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: HCHASEYFSVEIQSVLPFSRLGI*RSTSLQ Trigger: CTGTAGACTTGTGGATCTCAAGATACCCAGGCGACT...AAACGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAAGTCCCTGAGTTTTCCATaGTGCTGGTTAGCTATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSVEIQSVLPFWSLIPCKSLSFP*CWLAMK Trigger: CTTCATAGCTAACCAGCACAATGGAAAACTCAGGGA...CTTGCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | CACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGCTGTCTATCACATaGAGCATCCTCAGAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HCHASEYFSVEIQSVLPFWLSIT*SILRGK Trigger: TTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCA...AAACGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | CTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTTATTTGAAACATGAATaGCTCCACGGCATCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRRIGLHYRLAVYHIEHPYLKHE*LHGIFL Trigger: AAGGAAGATGCCGTGGAGCAATTCATGTTTCAAATA...AGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | ACCCACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTATTTGAAACATGAATaGCTCCACGGCATCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: THCHASEYFSVEIQSVLPYLKHE*LHGIFL Trigger: AAGGAAGATGCCGTGGAGCAATTCATGTTTCAAATA...CGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | CACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTCACTCCCTACATTCTaGTACTCCTCCCAATATTCC | + |
|
Preference number: 5 (lower is better) Translates to: HCHASEYFSVEIQSVLPFSLPTF*YSSQYS Trigger: GGAATATTGGGAGGAGTACAAGAATGTAGGGAGTGA...AAACGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | CACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTATTGCAACCTCTTTTTaGAGCCAGTCATTCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HCHASEYFSVEIQSVLPFIATSF*SQSFSQ Trigger: CTGGGAGAATGACTGGCTCAAAAAAGAGGTTGCAAT...AAACGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAAGAAAGTTGTGTTTCCTTaGCAGCTTTCCGTCTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSVEIQSVLPFWSLIPCKKVVFP*QLSVLE Trigger: CTCTAAGACGGAAAGCTGCAAAGGAAACACAACTTT...CTTGCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAAATGAGCCAAAGTGTAAGTAAAATGGGCAACGGATATACTTCAGTTCCCACCTCAGAGACTACCTaGAACCCACTGTCATGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKMSQSVSKMGNGYTSVPTSETT*NPLSCF Trigger: GAAGCATGACAGTGGGTTCAAGGTAGTCTCTGAGGT...GGGAACTGAAGTATATCCGTTGCCCATTTTACTTACACTTTGGCTCATTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
||
| CDS CCA 90 bp | TGTGATGTGGCTTTCTGGGCTCCTGACATCTTTATAGAGTTTGACTaGAATTTCCTTCTCTTGAAAATGAATGGGCATTTTCTTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: CDVAFWAPDIFIEFD*NFLLLKMNGHFLAL Trigger: GAGAGCAAGAAAATGCCCATTCATTTTCAAGAGAAGGAAATTCCAGTCAAACTCTATAAAGATGTCAGGAGCCCAGAAAGCCACATCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000280245.8 ENST00000342404.8 ENST00000526729.1 |
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| CDS-3UTR CAA 90 bp | CATCCTCAGAGGGAAAGATGTGTAGACAATGCTATGCAAACTTCTAAGTTTTTCTCCCTGAGTTTTCCATaGTGCTGGTTAGCTATGAAG | + |
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Preference number: 5 (lower is better) Translates to: HPQRERCVDNAMQTSKFFSLSFP*CWLAMK Trigger: CTTCATAGCTAACCAGCACAATGGAAAACTCAGGGA...GAAAAACTTAGAAGTTTGCATAGCATTGTCTACACATCTTTCCCTCTGAGGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CAA 90 bp | TTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTCAGAGGGAAAGATGTCTCAGCATTACTTATTaGCATGCGCATATCTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: LHYRLAVYHIEHPQRERCLSITY*HAHISQ Trigger: TTGAGAGATATGCGCATGCAAATAAGTAATGCTGAG...ACATCTTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCAGTCTATAATGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CAA 90 bp | AACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCACATTGAGCATCCTTCTTTTGGTCCAGTaGCAACAAAGTTTCCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: NYGELACIIDWLSITLSILLLVQ*QQSFLD Trigger: ATCAAGGAAACTTTGTTGCAACTGGACCAAAAGAAG...GATGCTCAATGTGATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CAA 90 bp | GCTGGTTTAAAAATGAGCCAAAGTGTAAGTAAAATGGGCAACGGATATACTTCATGGCTGTCTATCACATaGAGCATCCTCAGAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: AGLKMSQSVSKMGNGYTSWLSIT*SILRGK Trigger: TTTCCCTCTGAGGATGCTCAATGTGATAGACAGCCA...TGAAGTATATCCGTTGCCCATTTTACTTACACTTTGGCTCATTTTTAAACCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CAA 90 bp | TTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTTGGTCACTCATACCATGCAAGTTAAACTACGGAGAATaGGCTTGCATTATAGACTGG | + |
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Preference number: 5 (lower is better) Translates to: FSVEIQSVLPFWSLIPCKLNYGE*ACIIDW Trigger: CCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAA...CTTGCATGGTATGAGTGACCAAAACGGAAGCACGCTTTGTATTTCTACACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CAA 90 bp | TACACAGGGTTAAACTACGGAGAATTGGCTTGCATTATAGACTGGCTGTCTATCTTAAACTACGGAGAATaGGCTTGCATTATAGACTGG | + |
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Preference number: 5 (lower is better) Translates to: YTGLNYGELACIIDWLSILNYGE*ACIIDW Trigger: CCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAA...GATAGACAGCCAGTCTATAATGCAAGCCAATTCTCCGTAGTTTAACCCTGTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CAA 90 bp | GCTGGTTTAAAAATGAGCCAAAGTGTAAGTAAAATGGGCAACGGATATACTTCACTTCAACATCCTCTCTaGTTACAACTGGCAATCCCT | + |
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Preference number: 5 (lower is better) Translates to: AGLKMSQSVSKMGNGYTSLQHPL*LQLAIP Trigger: AGGGATTGCCAGTTGTAACAAGAGAGGATGTTGAAG...TGAAGTATATCCGTTGCCCATTTTACTTACACTTTGGCTCATTTTTAAACCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CAA 90 bp | CACTGTCATGCTTCTGAATACTTCAGTGTAGAAATACAAAGCGTGCTTCCGTTTCTTCTTTTGGTCCAGTaGCAACAAAGTTTCCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: HCHASEYFSVEIQSVLPFLLLVQ*QQSFLD Trigger: ATCAAGGAAACTTTGTTGCAACTGGACCAAAAGAAG...AAACGGAAGCACGCTTTGTATTTCTACACTGAAGTATTCAGAAGCATGACAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS CCA 90 bp | GTCTTAGAGAAAAGACTTCATCATCTTATATGTGATGTGGCTTTCTaGGCTCCTGACATCTTTATAGAGTTTGACTGGAATTTCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VLEKRLHHLICDVAF*APDIFIEFDWNFLL Trigger: GAGAAGGAAATTCCAGTCAAACTCTATAAAGATGTCAGGAGCCCAGAAAGCCACATCACATATAAGATGATGAAGTCTTTTCTCTAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000280245.8 ENST00000342404.8 ENST00000526729.1 |
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| CDS-3UTR CAA 90 bp | GCTGGTTTAAAAATGAGCCAAAGTGTAAGTAAAATGGGCAACGGATATACTTCAAAAGTTGTGTTTCCTTaGCAGCTTTCCGTCTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: AGLKMSQSVSKMGNGYTSKVVFP*QLSVLE Trigger: CTCTAAGACGGAAAGCTGCAAAGGAAACACAACTTT...TGAAGTATATCCGTTGCCCATTTTACTTACACTTTGGCTCATTTTTAAACCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS TCA 90 bp | GTTCACTCCCTACATTCTTGTACTCCTCCCAATATTCCTTTTCACTaGGTTTCTCAAGAAATAGTTTCTCAGCATTACTTATTTGCATGC | + |
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Preference number: 5 (lower is better) Translates to: VHSLHSCTPPNIPFH*VSQEIVSQHYLFAC Trigger: GCATGCAAATAAGTAATGCTGAGAAACTATTTCTTGAGAAACTCAGTGAAAAGGAATATTGGGAGGAGTACAAGAATGTAGGGAGTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS-3UTR CAA 90 bp | TTAAAAATGAGCCAAAGTGTAAGTAAAATGGGCAACGGATATACTTCAGTTCCCCTCAGCATTACTTATTaGCATGCGCATATCTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: LKMSQSVSKMGNGYTSVPLSITY*HAHISQ Trigger: TTGAGAGATATGCGCATGCAAATAAGTAATGCTGAG...GGGAACTGAAGTATATCCGTTGCCCATTTTACTTACACTTTGGCTCATTTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS CCA 72 bp | TCCCCTCCACAGCCTGCAGGGGCGGATACCCGGCCCTaGGCGGACAGCTCGCACTTCCTTTCAGCCCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SPPQPAGADTRP*ADSSHFLSARR Trigger: CCGGCGGGCTGAAAGGAAGTGCGAGCTGTCCGCCCAGGGCCGGGTATCCGCCCCTGCAGGCTGTGGAGGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS TCA 72 bp | TTCGTGGACAAGACCAGGAGGGCGCGACCCCCAGGCTaGTCTCGAAGCGGCGCAAGCCCAGGCCCGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: FVDKTRRARPPG*SRSGASPGPWR Trigger: TCTCCACGGGCCTGGGCTTGCGCCGCTTCGAGATCAGCCTGGGGGTCGCGCCCTCCTGGTCTTGTCCACGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS CCA 72 bp | ATCAGATTAAAAAGGCCTGCCCTCCTTCTCATCTCCTaGGTGGAGAAGAGGAGTGGGCCTATCAGAGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: IRLKRPALLLIS*VEKRSGPIRAL Trigger: AAGGGCTCTGATAGGCCCACTCCTCTTCTCCACCCAGGAGATGAGAAGGAGGGCAGGCCTTTTTAATCTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS CCA 72 bp | GACATTTCTTCAGGTGGCACTTCTAGTCCAGCAGCTTaGGTAAGATATAGTCGCCAGCAACGCCTGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: DISSGGTSSPAA*VRYSRQQRLAE Trigger: CTCTGCCAGGCGTTGCTGGCGACTATATCTTACCCAAGCTGCTGGACTAGAAGTGCCACCTGAAGAAATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280245.8 |
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| CDS CCA 72 bp | GACATTTCTTCAGGTGGCACTTCTAGTCCAGCAGCTTaGGTAAGATATAGTCGCCTGGGTATCTTGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: DISSGGTSSPAA*VRYSRLGILRS Trigger: GGATCTCAAGATACCCAGGCGACTATATCTTACCCAAGCTGCTGGACTAGAAGTGCCACCTGAAGAAATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000342404.8 ENST00000526729.1 |
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| CDS CCA 72 bp | CTTCATCGCTTCTTCAACATCCTCTCTTGTTACAACTaGCAATCCCTCTGCCTTCTCTTCACTCAGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LHRFFNILSCYN*QSLCLLFTQFL Trigger: AAGGAACTGAGTGAAGAGAAGGCAGAGGGATTGCCAGTTGTAACAAGAGAGGATGTTGAAGAAGCGATGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000280245.8 ENST00000342404.8 ENST00000526729.1 |
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| CDS CAA 72 bp | TCCATTTTTCCTTCATCGCTTCTTCAACATCCTCTCTaGTTACAACTGGCAATCCCTCTGCCTTCTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SIFPSSLLQHPL*LQLAIPLPSLH Trigger: GTGAAGAGAAGGCAGAGGGATTGCCAGTTGTAACAAGAGAGGATGTTGAAGAAGCGATGAAGGAAAAATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280245.8 ENST00000342404.8 ENST00000526729.1 |
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| CDS CAA 90 bp | TTTCAAACTTCCATTTTTCCTTCATCGCTTCTTCAACATCCTCTCTaGTTACAACTGGCAATCCCTCTGCCTTCTCTTCACTCAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FQTSIFPSSLLQHPL*LQLAIPLPSLHSVP Trigger: AGGAACTGAGTGAAGAGAAGGCAGAGGGATTGCCAGTTGTAACAAGAGAGGATGTTGAAGAAGCGATGAAGGAAAAATGGAAGTTTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000280245.8 ENST00000342404.8 ENST00000526729.1 |
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| CDS CAA 90 bp | GAGCTTTACAGCATTCTGTGTGGCCCATTCCTTCTTTTGGTCCAGTaGCAACAAAGTTTCCTTGATTATTTTCTTTCTAGTATCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ELYSILCGPFLLLVQ*QQSFLDYFLSSIFQ Trigger: CTGGAAGATACTAGAAAGAAAATAATCAAGGAAACTTTGTTGCAACTGGACCAAAAGAAGGAATGGGCCACACAGAATGCTGTAAAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000280245.8 ENST00000342404.8 ENST00000526729.1 ENST00000529676.2 |
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| CDS CAA 90 bp | TGTAAGGAGGTAATGAGTTTAGCATGTCGTTCACTCCCTACATTCTaGTACTCCTCCCAATATTCCTTTTCACTGAGTTTCTCAAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: CKEVMSLACRSLPTF*YSSQYSFSLSFSRN Trigger: ATTTCTTGAGAAACTCAGTGAAAAGGAATATTGGGAGGAGTACAAGAATGTAGGGAGTGAACGACATGCTAAACTCATTACCTCCTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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| CDS TCA 72 bp | GGTATCTTGAGATCCACAAGTCTACAGTTGGATAGTTaGTCAATAAGCACCAAATTTTCTGCTTCCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: GILRSTSLQLDS*SISTKFSASSS Trigger: TGAACTGGAAGCAGAAAATTTGGTGCTTATTGATCAACTATCCAACTGTAGACTTGTGGATCTCAAGATACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000280245.8 ENST00000342404.8 ENST00000526729.1 ENST00000529676.2 |
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| CDS CAA 72 bp | AGCATTCTGTGTGGCCCATTCCTTCTTTTGGTCCAGTaGCAACAAAGTTTCCTTGATTATTTTCTTTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: SILCGPFLLLVQ*QQSFLDYFLSS Trigger: ACTAGAAAGAAAATAATCAAGGAAACTTTGTTGCAACTGGACCAAAAGAAGGAATGGGCCACACAGAATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000280245.8 ENST00000342404.8 ENST00000526729.1 ENST00000529676.2 |
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| CDS CCA 72 bp | AAAAGACTTCATCATCTTATATGTGATGTGGCTTTCTaGGCTCCTGACATCTTTATAGAGTTTGACTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: KRLHHLICDVAF*APDIFIEFDWN Trigger: ATTCCAGTCAAACTCTATAAAGATGTCAGGAGCCCAGAAAGCCACATCACATATAAGATGATGAAGTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000280245.8 ENST00000342404.8 ENST00000526729.1 |
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| CDS CAA 72 bp | TGTTCTGACATTTTCTCTGCATTCTCTTTAACTGTGTaGATGTCATTTTGTAAGGAGGTAATGAGTTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: CSDIFSAFSLTV*MSFCKEVMSLA Trigger: TGCTAAACTCATTACCTCCTTACAAAATGACATCAACACAGTTAAAGAGAATGCAGAGAAAATGTCAGAACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280245.8 ENST00000342404.8 |
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