RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC80 (Homo sapiens)

Ensembl gene IDs: ENSG00000091986

Ensembl transcript IDs: ENST00000206423.8, ENST00000439685.6, ENST00000461431.1, ENST00000469554.1, ENST00000473959.5, ENST00000475181.1, ENST00000479368.1, ENST00000480275.1

Found 618 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGAAAGTAGTTAGCATGTTAACTGTGCCTCACCTTGACCTGAAGTaGAGAGCACTCACCAAGCCACAACCTGCTATCTGCACACCCCAC +
Preference number: 1 (lower is better)
Translates to: RKVVSMLTVPHLDLK*RALTKPQPAICTPH
Trigger: GTGGGGTGTGCAGATAGCAGGTTGTGGCTTGGTGAGTGCTCTTCACTTCAGGTCAAGGTGAGGCACAGTTAACATGCTAACTACTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 90 bp CAGAAATTCCATAGCAGCCTACTAGAACTCTGGAAGTATCGCCTTTaGCTGCAGTGCCAGATTCTGGTGAGGATTTCCTGGACCCCGATT +
Preference number: 1 (lower is better)
Translates to: QKFHSSLLELWKYRL*LQCQILVRISWTPI
Trigger: AATCGGGGTCCAGGAAATCCTCACCAGAATCTGGCACTGCAGCCAAAGGCGATACTTCCAGAGTTCTAGTAGGCTGCTATGGAATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 90 bp TCCACTTTATTATGGTGGTCTGGAACTGATCCTGTAATATCTCCATaGTATGCCTGTGCTGTACAGGGGGTAAAGTGTGAGGGGTCAAGA +
Preference number: 1 (lower is better)
Translates to: STLLWWSGTDPVISP*YACAVQGVKCEGSR
Trigger: TCTTGACCCCTCACACTTTACCCCCTGTACAGCACAGGCATACCATGGAGATATTACAGGATCAGTTCCAGACCACCATAATAAAGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 90 bp ACATATCAAGGCTTTCGACTATTCCCAACCAGGTCTTCCCAAATTTaGGCATATTCCTGCCTCTGCCTACCCTGTTCTAATTTGGCACTC +
Preference number: 1 (lower is better)
Translates to: TYQGFRLFPTRSSQI*AYSCLCLPCSNLAL
Trigger: GAGTGCCAAATTAGAACAGGGTAGGCAGAGGCAGGAATATGCCCAAATTTGGGAAGACCTGGTTGGGAATAGTCGAAAGCCTTGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 90 bp CAAGAATTTTCATGCCAGAAATTCCATAGCAGCCTACTAGAACTCTaGAAGTATCGCCTTTGGCTGCAGTGCCAGATTCTGGTGAGGATT +
Preference number: 1 (lower is better)
Translates to: QEFSCQKFHSSLLEL*KYRLWLQCQILVRI
Trigger: AATCCTCACCAGAATCTGGCACTGCAGCCAAAGGCGATACTTCCAGAGTTCTAGTAGGCTGCTATGGAATTTCTGGCATGAAAATTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 90 bp CTCGGGCTGCTTCCATCCTCCAGGCTTCTAGAAGTTGAGAAAGTATaGGCTTCATTGTTAATTATATTACAGAAAATGGGACCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: LGLLPSSRLLEVEKV*ASLLIILQKMGPAG
Trigger: CCCAGCTGGTCCCATTTTCTGTAATATAATTAACAATGAAGCTCATACTTTCTCAACTTCTAGAAGCCTGGAGGATGGAAGCAGCCCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR GCA 90 bp GCTAACACAATACCTATTGTGCAGCACAGGAATCAAGGAGTCATTTaGACTTTTCGTAAGACTATAACTGTCACAGATTGTGATCCCGCT +
Preference number: 1 (lower is better)
Translates to: ANTIPIVQHRNQGVI*TFRKTITVTDCDPA
Trigger: AGCGGGATCACAATCTGTGACAGTTATAGTCTTACGAAAAGTGCAAATGACTCCTTGATTCCTGTGCTGCACAATAGGTATTGTGTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 90 bp AATCTAATCTGCCTGTGCTCTATAAATGGAGCAACAAAGCCTGAATaGCAGCATGTCTATGGACAGCATGGTTTACTGGACATTTTAAGC +
Preference number: 1 (lower is better)
Translates to: NLICLCSINGATKPE*QHVYGQHGLLDILS
Trigger: GCTTAAAATGTCCAGTAAACCATGCTGTCCATAGACATGCTGTCATTCAGGCTTTGTTGCTCCATTTATAGAGCACAGGCAGATTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 90 bp AAAGCTGGGCTTGGTACTTTCTCTGGCTTTTGTGGCCAATATTACTaGACTCCCGTGGTATCAAGTTTCATAAAAGAAACTCATACAAAG +
Preference number: 1 (lower is better)
Translates to: KAGLGTFSGFCGQYY*TPVVSSFIKETHTK
Trigger: CTTTGTATGAGTTTCTTTTATGAAACTTGATACCACGGGAGTCCAGTAATATTGGCCACAAAAGCCAGAGAAAGTACCAAGCCCAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR GCA 90 bp TCATGGATGATTTTAAGAGGCCCAAGACTTCATTGGAGGAAGCTCTaGTATAGACATAGTGGAAATAGCAAGAGAACTGGAATTAGAAGT +
Preference number: 1 (lower is better)
Translates to: SWMILRGPRLHWRKL*YRHSGNSKRTGIRS
Trigger: ACTTCTAATTCCAGTTCTCTTGCTATTTCCACTATGTCTATAGCAGAGCTTCCTCCAATGAAGTCTTGGGCCTCTTAAAATCATCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 90 bp GATTGTGATCCCGCTAATGGATCTGGGCAAAGCAAATTAAAAACCTaGAAAGGATTCACCATTCTAGATGCTGTTAAGAACATCGTGATT +
Preference number: 1 (lower is better)
Translates to: DCDPANGSGQSKLKT*KGFTILDAVKNIVI
Trigger: AATCACGATGTTCTTAACAGCATCTAGAATGGTGAATCCTTTCCAGGTTTTTAATTTGCTTTGCCCAGATCCATTAGCGGGATCACAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 90 bp CACAGTTTCAGAGATATGCCTTGTATTTTTCCAGATTATAGGCTTTaGGGACATTCACCAATAGCATCCTCCTCTGAATGTATTTTGGTC +
Preference number: 1 (lower is better)
Translates to: HSFRDMPCIFPDYRL*GHSPIASSSECILV
Trigger: GACCAAAATACATTCAGAGGAGGATGCTATTGGTGAATGTCCTCAAAGCCTATAATCTGGAAAAATACAAGGCATATCTCTGAAACTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR GCA 90 bp TTAATAACAGTGGAAAATAGCCTTCCCATTATTGTTAGAGGATGGTaGCATCATGATGCTAAATGCCTATCTGAGGGGAAGCTCATAAAT +
Preference number: 1 (lower is better)
Translates to: LITVENSLPIIVRGW*HHDAKCLSEGKLIN
Trigger: ATTTATGAGCTTCCCCTCAGATAGGCATTTAGCATCATGATGGCACCATCCTCTAACAATAATGGGAAGGCTATTTTCCACTGTTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR GCA 90 bp GGGTCCAAGAGACATTCCATATTTAAGCTTCATAATGTCCTTATTTaGACACATATACCACACTGCCTTCATTTTCTCCAGCTGATAGAT +
Preference number: 1 (lower is better)
Translates to: GSKRHSIFKLHNVLI*THIPHCLHFLQLID
Trigger: ATCTATCAGCTGGAGAAAATGAAGGCAGTGTGGTATATGTGTGCAAATAAGGACATTATGAAGCTTAAATATGGAATGTCTCTTGGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 90 bp AAATTTTGTGTGACTCACTTTATTGCGATATCCACTTTATTATGGTaGTCTGGAACTGATCCTGTAATATCTCCATGGTATGCCTGTGCT +
Preference number: 1 (lower is better)
Translates to: KFCVTHFIAISTLLW*SGTDPVISPWYACA
Trigger: AGCACAGGCATACCATGGAGATATTACAGGATCAGTTCCAGACCACCATAATAAAGTGGATATCGCAATAAAGTGAGTCACACAAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 90 bp CCACACTTATATAACACAGTAAACTTAATAAATGTGTGTATGTTCTaGTTGCTCCAACAACCAACCTTTCTCCAATCTTTCTCCTTCTTC +
Preference number: 1 (lower is better)
Translates to: PHLYNTVNLINVCMF*LLQQPTFLQSFSFF
Trigger: GAAGAAGGAGAAAGATTGGAGAAAGGTTGGTTGTTGGAGCAATCAGAACATACACACATTTATTAAGTTTACTGTGTTATATAAGTGTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR TCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATCTGGGATTACAGGTGTaGGCCCCTCACTGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDLGLQV*APHCSW
Trigger: CCAGGAGCAGTGAGGGGCTCACACCTGTAATCCCAG...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR TCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATGGTGGGAGGATTGTTTaGGGGAAGCTGAGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDGGRIV*GKLSLQ
Trigger: CTGCAAACTCAGCTTCCCTCAAACAATCCTCCCACC...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR TCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATTTAAGAAGGGCCCACTaGGGCCATCATTCACCCTAC +
Preference number: 2 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDLRRAH*GHHSPY
Trigger: GTAGGGTGAATGATGGCCTCAGTGGGCCCTTCTTAA...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR GCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAACCCTACTCTCGGGCTaGTTCCATCCTCCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPTLLSG*FHPPGF
Trigger: GAAGCCTGGAGGATGGAAGCAGCCCGAGAGTAGGGT...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCATGGTCCCAGCTAACTTaGGATGCTGAGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPWSQLT*DAEVGG
Trigger: TCCTCCCACCTCAGCATCCCAAGTTAGCTGGGACCA...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR TCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAGCAACAAAGCCTGAATaGCAGCATGTCTATGGACAG +
Preference number: 2 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPATKPE*QHVYGQ
Trigger: CTGTCCATAGACATGCTGTCATTCAGGCTTTGTTGC...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAAGCCTCCTGAATAGCTaGGACCACAGACACACACCA +
Preference number: 2 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPSLLNS*DHRHTP
Trigger: TGGTGTGTGTCTGTGGTCCCAGCTATTCAGGAGGCT...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 90 bp ATAACAGAAGCAGGGCAGGAAGTGGCTATGATAACAAAGCTGGGCTaGGTACTTTCTCTGGCTTTTGTGGCCAATATTACTGGACTCCCG +
Preference number: 2 (lower is better)
Translates to: ITEAGQEVAMITKLG*VLSLAFVANITGLP
Trigger: CGGGAGTCCAGTAATATTGGCCACAAAAGCCAGAGAAAGTACCAAGCCCAGCTTTGTTATCATAGCCACTTCCTGCCCTGCTTCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCACCTGTAATATCTCCATaGTATGCCTGTGCTGTACAG +
Preference number: 2 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPPVISP*YACAVQ
Trigger: CTGTACAGCACAGGCATACCATGGAGATATTACAGG...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR TCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAAATGTGTGTATGTTCTaGTTGCTCCAACAACCAACC +
Preference number: 2 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPNVCMF*LLQQPT
Trigger: GGTTGGTTGTTGGAGCAATCAGAACATACACACATT...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCAGCTGCAGAGGAAACTaGCTGAGTCTAAGGTTACAT +
Preference number: 2 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLISCRGN*LSLRLH
Trigger: ATGTAACCTTAGACTCAGCCAGTTTCCTCTGCAGCT...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR GCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCATACAGCATCACATGCTaGAGAGAAATCTTTCATGAA +
Preference number: 2 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPYSITC*REIFHE
Trigger: TTCATGAAAGATTTCTCTGCAGCATGTGATGCTGTA...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 90 bp AGTCAATCGAAGTGGCAAACTTCATTGCTGTCTTATTTTAAGAAATaGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCAT +
Preference number: 2 (lower is better)
Translates to: SQSKWQTSLLSYFKK*PPSPPTFSNHHPDH
Trigger: ATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAATAAGACAGCAATGAAGTTTGCCACTTCGATTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR GCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCATATATTGGAAGAAGATaGCATCTCAGACTTACGTAT +
Preference number: 2 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPYIGRR*HLRLTY
Trigger: ATACGTAAGTCTGAGATGGCATCTTCTTCCAATATA...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAGAAGGTAGCAGAGTCTaGTTCATGAGTTTGAAGAAA +
Preference number: 2 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPEGSRV*FMSLKK
Trigger: TTTCTTCAAACTCATGAACCAGACTCTGCTACCTTC...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCATCTAATTCATTTTCTTaGGAGATGAAACTCCCTCTT +
Preference number: 2 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPSNSFS*EMKLPL
Trigger: AAGAGGGAGTTTCATCTCCCAAGAAAATGAATTAGA...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAACTGGGTTGATCAAATaGTTCTTTCTTTGCACATAT +
Preference number: 2 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPTGLIK*FFLCTY
Trigger: ATATGTGCAAAGAAAGAACCATTTGATCAACCCAGT...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 90 bp GAGAGGAAGGTATACTTATTGCAGAGGAGAAAAGCCAAAGAACGTTaGCCCATGGGCAGTCTTAGCTATTTAAAATCACCCACTTCTTCA +
Preference number: 2 (lower is better)
Translates to: ERKVYLLQRRKAKER*PMGSLSYLKSPTSS
Trigger: TGAAGAAGTGGGTGATTTTAAATAGCTAAGACTGCCCATGGGCAAACGTTCTTTGGCTTTTCTCCTCTGCAATAAGTATACCTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR TCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATTCACACACTAAGAACTaGGTTCTAAAGTCACTTGAG +
Preference number: 2 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNSHTKN*VLKSLE
Trigger: CTCAAGTGACTTTAGAACTCAGTTCTTAGTGTGTGA...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR GCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATAGGATTATACTCCTTTaGATTCCAGCTACTTTGGTC +
Preference number: 2 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNRIILL*IPATLV
Trigger: GACCAAAGTAGCTGGAATGCAAAGGAGTATAATCCT...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR GCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGAAATATCTCCATGGTATaGCTGTGCTGTACAGGGGGT +
Preference number: 2 (lower is better)
Translates to: FINKAATGFERIGSNFKRNISMV*LCCTGG
Trigger: ACCCCCTGTACAGCACAGGCATACCATGGAGATATT...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATTCCACTTTATTATGGTaGTCTGGAACTGATCCTGTA +
Preference number: 2 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDSTLLW*SGTDPV
Trigger: TACAGGATCAGTTCCAGACCACCATAATAAAGTGGA...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 90 bp GTAGTCAATGCCTCACTTCAAAGCTTCAACCAACAGGCTTACTCCTaGTTAGAAGTTAACGCAGCTGGTGATTTTAAGTTGAAATCAATG +
Preference number: 2 (lower is better)
Translates to: VVNASLQSFNQQAYS*LEVNAAGDFKLKSM
Trigger: CATTGATTTCAACTTAAAATCACCAGCTGCGTTAACTTCTAACAAGGAGTAAGCCTGTTGGTTGAAGCTTTGAAGTGAGGCATTGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 90 bp TTAGTATCCTGTATTAAGAACTGGGTTGATCAAATGGTTCTTTCTTaGCACATATCAAGGCTTTCGACTATTCCCAACCAGGTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LVSCIKNWVDQMVLS*HISRLSTIPNQVFP
Trigger: TGGGAAGACCTGGTTGGGAATAGTCGAAAGCCTTGATATGTGCAAAGAAAGAACCATTTGATCAACCCAGTTCTTAATACAGGATACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 90 bp CCAGAAGCCATTGACCATGTTAATGGTGGAGCCAATATGAAGTACTaGCTAAATCATGTGGTGCGTGAAAGGAAGAGCAATGTTATAATT +
Preference number: 2 (lower is better)
Translates to: PEAIDHVNGGANMKY*LNHVVRERKSNVII
Trigger: AATTATAACATTGCTCTTCCTTTCACGCACCACATGATTTAGCAAGTACTTCATATTGGCTCCACCATTAACATGGTCAATGGCTTCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR GCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGATGTAGTTTTAGCAGCTaGAGAGGAAACTGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: FINKAATGFERIGSNFKRCSFSS*RGNWLS
Trigger: ACTCAGCCAGTTTCCTCTGCAGCTGCTAAAACTACA...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 90 bp GCAAGAGAACTGGAATTAGAAGTGGAGCCTGAAGATGTGACTGAATaGCTGCAATCTCATTACAAAAGTTTAATAGATGAAGACTTGCTT +
Preference number: 2 (lower is better)
Translates to: ARELELEVEPEDVTE*LQSHYKSLIDEDLL
Trigger: AAGCAAGTCTTCATCTATTAAACTTTTGTAATGAGATTGCAGCAATTCAGTCACATCTTCAGGCTCCACTTCTAATTCCAGTTCTCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 90 bp TGCATTCCAGCTACTTTGGTCCATTGTAACTTGGTAACCTTTGCCTaGAAAACAAAAAGAATCCCTGGATATAATCTCCTTCCTTGTAAT +
Preference number: 2 (lower is better)
Translates to: CIPATLVHCNLVTFA*KTKRIPGYNLLPCN
Trigger: ATTACAAGGAAGGAGATTATATCCAGGGATTCTTTTTGTTTTCAAGGCAAAGGTTACCAAGTTACAATGGACCAAAGTAGCTGGAATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 90 bp TACCTAGTTTATACTACCAGAAGACAGAGATTCAGGTTAGCTAGTTaGCTAATCCTCACAGTTTCAGAGATATGCCTTGTATTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: YLVYTTRRQRFRLAS*LILTVSEICLVFFQ
Trigger: CTGGAAAAATACAAGGCATATCTCTGAAACTGTGAGGATTAGCAAACTAGCTAACCTGAATCTCTGTCTTCTGGTAGTATAAACTAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 90 bp AGGATTATACTCCTTTGCATTCCAGCTACTTTGGTCCATTGTAACTaGGTAACCTTTGCCTTGAAAACAAAAAGAATCCCTGGATATAAT +
Preference number: 2 (lower is better)
Translates to: RIILLCIPATLVHCN*VTFALKTKRIPGYN
Trigger: ATTATATCCAGGGATTCTTTTTGTTTTCAAGGCAAAGGTTACCAAGTTACAATGGACCAAAGTAGCTGGAATGCAAAGGAGTATAATCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR GCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGAGTACTACTGGTAAAATaGTATCATACAGCATCACAT +
Preference number: 2 (lower is better)
Translates to: FINKAATGFERIGSNFKRVLLVK*YHTASH
Trigger: ATGTGATGCTGTATGATAGCATTTTACCAGTAGTAC...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 72 bp CACTTTGTCACCCAGGATGATGATGATGGAGTGCTGTaGCACGATCACGGCACACTGAAGCCTCGACCTCCT +
Preference number: 3 (lower is better)
Translates to: HFVTQDDDDGVL*HDHGTLKPRPP
Trigger: AGGAGGTCGAGGCTTCAGTGTGCCGTGATCGTGCCACAGCACTCCATCATCATCATCCTGGGTGACAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CAA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATAATCTTTTAAAAATATaGCTGTTCGGGCCGGGCGCA +
Preference number: 3 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDNLLKI*LFGPGA
Trigger: TGCGCCCGGCCCGAACAGCAATATTTTTAAAAGATT...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR GCA 72 bp CTACTAGAACTCTGGAAGTATCGCCTTTGGCTGCAGTaGCAGATTCTGGTGAGGATTTCCTGGACCCCGATT +
Preference number: 3 (lower is better)
Translates to: LLELWKYRLWLQ*QILVRISWTPI
Trigger: AATCGGGGTCCAGGAAATCCTCACCAGAATCTGGCACTGCAGCCAAAGGCGATACTTCCAGAGTTCTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp GTTAGCATGTTAACTGTGCCTCACCTTGACCTGAAGTaGAGAGCACTCACCAAGCCACAACCTGCTATCTGC +
Preference number: 3 (lower is better)
Translates to: VSMLTVPHLDLK*RALTKPQPAIC
Trigger: GCAGATAGCAGGTTGTGGCTTGGTGAGTGCTCTTCACTTCAGGTCAAGGTGAGGCACAGTTAACATGCTAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 72 bp TCATGCCAGAAATTCCATAGCAGCCTACTAGAACTCTaGAAGTATCGCCTTTGGCTGCAGTGCCAGATTCTG +
Preference number: 3 (lower is better)
Translates to: SCQKFHSSLLEL*KYRLWLQCQIL
Trigger: CAGAATCTGGCACTGCAGCCAAAGGCGATACTTCCAGAGTTCTAGTAGGCTGCTATGGAATTTCTGGCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 72 bp GGCTTTCGACTATTCCCAACCAGGTCTTCCCAAATTTaGGCATATTCCTGCCTCTGCCTACCCTGTTCTAAT +
Preference number: 3 (lower is better)
Translates to: GFRLFPTRSSQI*AYSCLCLPCSN
Trigger: ATTAGAACAGGGTAGGCAGAGGCAGGAATATGCCCAAATTTGGGAAGACCTGGTTGGGAATAGTCGAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CAA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAGAGCCAGAATTATTATaGATAGAGGGGCCTGGGAAA +
Preference number: 3 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPEPELL*IEGPGK
Trigger: TTTCCCAGGCCCCTCTATCAATAATAATTCTGGCTC...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CAA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCATTACAAATTGAAGGTTaGTGGCAACCCTGCATCAAG +
Preference number: 3 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPLQIEG*WQPCIK
Trigger: CTTGATGCAGGGTTGCCACAAACCTTCAATTTGTAA...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp GGAAGTATCGCCTTTGGCTGCAGTGCCAGATTCTGGTaGGGATTTCCTGGACCCCGATTTATATCTGAAAAA +
Preference number: 3 (lower is better)
Translates to: GSIAFGCSARFW*GFPGPRFISEK
Trigger: TTTTTCAGATATAAATCGGGGTCCAGGAAATCCTCACCAGAATCTGGCACTGCAGCCAAAGGCGATACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR GCA 72 bp TTTAAAAGCAGTACACTTCGACGTGGCTCACTTTCCTaGACACCTCAGGCAGCTTGTACAGACTATCCAAGA +
Preference number: 3 (lower is better)
Translates to: FKSSTLRRGSLS*TPQAACTDYPR
Trigger: TCTTGGATAGTCTGTACAAGCTGCCTGAGGTGTGCAGGAAAGTGAGCCACGTCGAAGTGTACTGCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 72 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATaGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: KKAGNVVRSVEE*SWPHVVLAAAE
Trigger: CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
3UTR CCA 72 bp AGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTaGCCTTTTCATGATACCCATTTCTGTGTATCATTT +
Preference number: 3 (lower is better)
Translates to: RARTGTQFSQVQ*PFHDTHFCVSF
Trigger: AAATGATACACAGAAATGGGTATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CAA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCATTCAGGTTAGCTAGTTaGCTAATCCTCACAGTTTCA +
Preference number: 3 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPFRLAS*LILTVS
Trigger: TGAAACTGTGAGGATTAGCAAACTAGCTAACCTGAA...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp TGCCTGTGCTCTATAAATGGAGCAACAAAGCCTGAATaGCAGCATGTCTATGGACAGCATGGTTTACTGGAC +
Preference number: 3 (lower is better)
Translates to: CLCSINGATKPE*QHVYGQHGLLD
Trigger: GTCCAGTAAACCATGCTGTCCATAGACATGCTGTCATTCAGGCTTTGTTGCTCCATTTATAGAGCACAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp CTTAGTGAGGAAGGTGTGTCAAAAGCTGAGACAGGCTaGAAGCTAAGCCTCTTATGCCAAACAACCAAGTTG +
Preference number: 3 (lower is better)
Translates to: LSEEGVSKAETG*KLSLLCQTTKL
Trigger: CAACTTGGTTGTTTGGCATAAGAGGCTTAGCTTTCAGCCTGTCTCAGCTTTTGACACACCTTCCTCACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp CTTTCCCTATTCCCACAAAAATCTGGAACTGGGTTCTaGACTGAGAAGTCTGGGTTCCCTGAGAATTGGACA +
Preference number: 3 (lower is better)
Translates to: LSLFPQKSGTGF*TEKSGFPENWT
Trigger: TGTCCAATTCTCAGGGAACCCAGACTTCTCAGTTCAGAACCCAGTTCCAGATTTTTGTGGGAATAGGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CAA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCACTAACACAATACCTATaGTGCAGCACAGGAATCAAG +
Preference number: 3 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPLTQYL*CSTGIK
Trigger: CTTGATTCCTGTGCTGCACAATAGGTATTGTGTTAG...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 72 bp CCCTCATGGATGATTTTAAGAGGCCCAAGACTTCATTaGAGGAAGCTCTGCTATAGACATAGTGGAAATAGC +
Preference number: 3 (lower is better)
Translates to: PSWMILRGPRLH*RKLCYRHSGNS
Trigger: GCTATTTCCACTATGTCTATAGCAGAGCTTCCTCCAATGAAGTCTTGGGCCTCTTAAAATCATCCATGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 72 bp ACAGTGGAAAATAGCCTTCCCATTATTGTTAGAGGATaGTGCCATCATGATGCTAAATGCCTATCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: TVENSLPIIVRG*CHHDAKCLSEG
Trigger: CCCCTCAGATAGGCATTTAGCATCATGATGGCACCATCCTCTAACAATAATGGGAAGGCTATTTTCCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR-3UTR CAA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATATAACAAAGCTGGGCTaGGTACTTTCTCTGGCTTTT +
Preference number: 3 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNITKLG*VLSLAF
Trigger: AAAAGCCAGAGAAAGTACCAAGCCCAGCTTTGTTAT...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp AATCTGCCTGTGCTCTATAAATGGAGCAACAAAGCCTaGATGACAGCATGTCTATGGACAGCATGGTTTACT +
Preference number: 3 (lower is better)
Translates to: NLPVLYKWSNKA*MTACLWTAWFT
Trigger: AGTAAACCATGCTGTCCATAGACATGCTGTCATTCAGGCTTTGTTGCTCCATTTATAGAGCACAGGCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 72 bp CCCGCTAATGGATCTGGGCAAAGCAAATTAAAAACCTaGAAAGGATTCACCATTCTAGATGCTGTTAAGAAC +
Preference number: 3 (lower is better)
Translates to: PANGSGQSKLKT*KGFTILDAVKN
Trigger: GTTCTTAACAGCATCTAGAATGGTGAATCCTTTCCAGGTTTTTAATTTGCTTTGCCCAGATCCATTAGCGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp TTTTTCCTACTGCAGAGCTTCTTCACGTTGGAATGGTaGATAGGTACACATTTCTCAAAGCTCAAAGTGCAA +
Preference number: 3 (lower is better)
Translates to: FFLLQSFFTLEW*IGTHFSKLKVQ
Trigger: TTGCACTTTGAGCTTTGAGAAATGTGTACCTATTCACCATTCCAACGTGAAGAAGCTCTGCAGTAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CCA 72 bp CTTGGTACTTTCTCTGGCTTTTGTGGCCAATATTACTaGACTCCCGTGGTATCAAGTTTCATAAAAGAAACT +
Preference number: 3 (lower is better)
Translates to: LGTFSGFCGQYY*TPVVSSFIKET
Trigger: AGTTTCTTTTATGAAACTTGATACCACGGGAGTCCAGTAATATTGGCCACAAAAGCCAGAGAAAGTACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp GAAGGTTTGTGGCAACCCTGCATCAAGGAAGTCTGTTaGCATCATTTTTGCAATAGTATGTACTCACTTTAT +
Preference number: 3 (lower is better)
Translates to: EGLWQPCIKEVC*HHFCNSMYSLY
Trigger: ATAAAGTGAGTACATACTATTGCAAAAATGATGTCAACAGACTTCCTTGATGCAGGGTTGCCACAAACCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp AGAGATATGCCTTGTATTTTTCCAGATTATAGGCTTTaGGGACATTCACCAATAGCATCCTCCTCTGAATGT +
Preference number: 3 (lower is better)
Translates to: RDMPCIFPDYRL*GHSPIASSSEC
Trigger: ACATTCAGAGGAGGATGCTATTGGTGAATGTCCTCAAAGCCTATAATCTGGAAAAATACAAGGCATATCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp AGATTACGCATTTGTGGTCTCAAGTTAGGAAACTGTTaGAGAACAAATATGTCCCTTATTAGAGGGCCTCTT +
Preference number: 3 (lower is better)
Translates to: RLRICGLKLGNC*RTNMSLIRGPL
Trigger: AAGAGGCCCTCTAATAAGGGACATATTTGTTCTTCAACAGTTTCCTAACTTGAGACCACAAATGCGTAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp ATAATTAACGGCGTACCTAACTGTTCTCTACTAGTCTaGGCCTCTGTACAGAGAAATGTCAGTTTTGTATTC +
Preference number: 3 (lower is better)
Translates to: IINGVPNCSLLV*ASVQRNVSFVF
Trigger: GAATACAAAACTGACATTTCTCTGTACAGAGGCTCAGACTAGTAGAGAACAGTTAGGTACGCCGTTAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp AGCCAATATGAAGTACTTGCTAAATCATGTGGTGCGTaGAAGGAAGAGCAATGTTATAATTGCATCCTCCTA +
Preference number: 3 (lower is better)
Translates to: SQYEVLAKSCGA*KEEQCYNCILL
Trigger: TAGGAGGATGCAATTATAACATTGCTCTTCCTTTCACGCACCACATGATTTAGCAAGTACTTCATATTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR GCA 72 bp ATACCTATTGTGCAGCACAGGAATCAAGGAGTCATTTaGACTTTTCGTAAGACTATAACTGTCACAGATTGT +
Preference number: 3 (lower is better)
Translates to: IPIVQHRNQGVI*TFRKTITVTDC
Trigger: ACAATCTGTGACAGTTATAGTCTTACGAAAAGTGCAAATGACTCCTTGATTCCTGTGCTGCACAATAGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR GCA 72 bp TTAATATTTTCGTGCCTGCTAACACAATACCTATTGTaGAGCACAGGAATCAAGGAGTCATTTGCACTTTTC +
Preference number: 3 (lower is better)
Translates to: LIFSCLLTQYLL*STGIKESFALF
Trigger: GAAAAGTGCAAATGACTCCTTGATTCCTGTGCTGCACAATAGGTATTGTGTTAGCAGGCACGAAAATATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR GCA 72 bp ATCCTACGACTTTTCAGAATTATGCTAAATCTAATCTaGCTGTGCTCTATAAATGGAGCAACAAAGCCTGAA +
Preference number: 3 (lower is better)
Translates to: ILRLFRIMLNLI*LCSINGATKPE
Trigger: TTCAGGCTTTGTTGCTCCATTTATAGAGCACAGGCAGATTAGATTTAGCATAATTCTGAAAAGTCGTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR TCA 72 bp TATGTCTTATTTTATAGTCCTCCAAATGATGATCTATaGCTTCTCTGCCTGCTCATTAGAGGAAGAAAAGCT +
Preference number: 3 (lower is better)
Translates to: YVLFYSPPNDDL*LLCLLIRGRKA
Trigger: AGCTTTTCTTCCTCTAATGAGCAGGCAGAGAAGTCATAGATCATCATTTGGAGGACTATAAAATAAGACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR GCA 72 bp AGACATTCCATATTTAAGCTTCATAATGTCCTTATTTaGACACATATACCACACTGCCTTCATTTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: RHSIFKLHNVLI*THIPHCLHFLQ
Trigger: CTGGAGAAAATGAAGGCAGTGTGGTATATGTGTGCAAATAAGGACATTATGAAGCTTAAATATGGAATGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGATCACGGCGGCCCCATTaGTGTCCGAGCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGSRRPH*CPSGLA
Trigger: CGCCAGCCCGCTCGGACATCAATGGGGCCGCCGTGA...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGATGTCCGAGCGGGCTaGCGGCTCTGTTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAEDVRAG*RLCWAS
Trigger: GCTCGCCCAACAGAGCCGCCAGCCCGCTCGGACATC...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCACACGCGGAGAGCCCCTaGCTGCTGGTCTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPHAESP*LLVFAQ
Trigger: CTGAGCAAAGACCAGCAGCCAGGGGCTCTCCGCGTG...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATCAGCAGGTCGGCCACTaGCTTCTTGGGACTCTGCGT +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDQQVGH*LLGTLR
Trigger: ACGCAGAGTCCCAAGAAGTCAGTGGCCGACCTGCTG...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATCGAGACCTCCCAGTGTaGCTCAGAAACCGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDRDLPV*LRNRAG
Trigger: GCCAGCTCGGTTTCTGAGGCACACTGGGAGGTCTCG...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGCTAGGGTCCAGGGGCTaGTCCAGGATCTGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAELGSRG*SRIWPS
Trigger: CGAGGGCCAGATCCTGGAGCAGCCCCTGGACCCTAG...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCAGGCCAGCAGCCCTTGTaGTGGGTTCTGAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPGQQPL*WVLRWW
Trigger: CCACCATCTCAGAACCCAGCACAAGGGCTGCTGGCC...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATCTGGTCTCGAAGTCCTaGGCTCAAGCGACCCGCTCA +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDLVSKS*AQATRS
Trigger: TGAGCGGGTCGCTTGAGCCCAGGACTTCGAGACCAG...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCACAGCCTGTCCTGATCTaGGAGCTGAGCCGATGCCTT +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPQPVLI*ELSRCL
Trigger: AAGGCATCGGCTCAGCTCTCAGATCAGGACAGGCTG...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGATGCACGCCTGACCACTaGGGGCAGAGAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGCTPDH*GQRAAV
Trigger: CACAGCAGCTCTCTGCCCTCAGTGGTCAGGCGTGCA...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACTGGCTGCTGGTCTTTaGTCAGGTCTCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGLAAGL*SGLTAA
Trigger: GGCCGCCGTGAGACCTGAGCAAAGACCAGCAGCCAG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACAGGAGGAAGGGTGGTaGCTCTGGGGGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGQEEGW*LWGLRE
Trigger: CTCCCTCAACCCCCAGAGCCACCACCCTTCCTCCTG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGATCCAGGGCCTCTGCGTaGTGGGAAAGGCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGSRASA*WERQWW
Trigger: CCACCACTGCCTTTCCCACCACGCAGAGGCCCTGGA...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCACCTCCTGGTTGTCTGTaGCCTCTCCCTGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPPPGCL*PLPVLI
Trigger: GATCAGCACAGGGAGAGGCCACAGACAACCAGGAGG...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCTCGTCCTCCAGCTaGGAGGCAGTAGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFSSSSS*EAVGRL
Trigger: CAGCCGGCCTACTGCCTCTCAGCTGGAGGACGAGCT...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACAGCAGGTCGGCCACTaGCTTCTTGGGACTCTGCGT +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGQQVGH*LLGTLR
Trigger: ACGCAGAGTCCCAAGAAGTCAGTGGCCGACCTGCTG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACGAGACCTCCCAGTGTaGCTCAGAAACCGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGRDLPV*LRNRAG
Trigger: GCCAGCTCGGTTTCTGAGGCACACTGGGAGGTCTCG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAGATGTCCGAGCGGGCTaGCGGCTCTGTTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPDVRAG*RLCWAS
Trigger: GCTCGCCCAACAGAGCCGCCAGCCCGCTCGGACATC...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAGGCTGCTCCAGGATCTaGCCCTCGCTGGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGGCSRI*PSLVIL
Trigger: AAGGATCACCAGCGAGGGCCAGATCCTGGAGCAGCC...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCAGCAAAGCTGGTGCAGTaGCGGCCAGTTTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPAKLVQ*RPVFSG
Trigger: TCCTGAGAAAACTGGCCGCCACTGCACCAGCTTTGC...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTGTTGTAGGGGGCCTGTaGGAGGGTGAGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVVVGGL*EGEGVQ
Trigger: CTGGACCCCCTCACCCTCCCACAGGCCCCCTACAAC...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTGTCCCGGAAACGGCCTaGGCCAGCAGCCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFVPETA*ASSPCA
Trigger: AGCACAAGGGCTGCTGGCCCAGGCCGTTTCCGGGAC...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCATCTCCTTTGCTGGCTTaGGAGGACCTGGCACCACAT +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPSPLLA*EDLAPH
Trigger: ATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGA...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAAGGACCCCTCATCTCTaGTCATCTCACGCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGRTPHL*SSHAES
Trigger: GCTCTCCGCGTGAGATGATCAGAGATGAGGGGTCCT...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTCAGCAGGCTCATCATaGGGCGGTAGTAGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAESAGSS*GGSSLP
Trigger: CGGAAGGCTACTACCGCCTCATGATGAGCCTGCTGA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTGGGAGGGGCATTTGTaGAGCTCTCCAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAEWEGHL*SSPSWW
Trigger: CCACCAGCTTGGAGAGCTTCACAAATGCCCCTCCCA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAGCTCGTCCTCCAGCTaGGAGGCAGTAGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAASSSSS*EAVGRL
Trigger: CAGCCGGCCTACTGCCTCTCAGCTGGAGGACGAGCT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACCAAAATTGCACGCCTaGCCACTGAGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGPKLHA*PLRAES
Trigger: GCTCTCTGCCCTCAGTGGTCAGGCGTGCAATTTTGG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATATCCCCAGTGACTGCTaGATCGCCATTTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDIPSDC*IAISCL
Trigger: GAGACAGGAAATGGCGATTCAGCAGTCACTGGGGAT...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTCTGGCTGCTGGTCTTTaGTCAGGTCTCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSLAAGL*SGLTAA
Trigger: GGCCGCCGTGAGACCTGAGCAAAGACCAGCAGCCAG...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTGTTCCCGCCTGTCCATaGGGTTGTCCCGGAAACGGC +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSVPACP*GCPGNG
Trigger: GCCGTTTCCGGGACAACCGCATGGACAGGCGGGAAC...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTGTTCCCGCCTGTCCATaGGGTTGTCCCGGAAACGGC +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFVPACP*GCPGNG
Trigger: GCCGTTTCCGGGACAACCGCATGGACAGGCGGGAAC...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACCTCAGAAACCGAGCTaGCCTACTGCTGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGPQKPS*PTAVRR
Trigger: TCTCCGGACAGCAGTAGGCCAGCTCGGTTTCTGAGG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGAGGTTGGGGCAAAGCTaGTGCAGTGGCGGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAERLGQS*CSGGQF
Trigger: AAACTGGCCGCCACTGCACCAGCTTTGCCCCAACCT...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAAGGTTGGGGCAAAGCTaGTGCAGTGGCGGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGRLGQS*CSGGQF
Trigger: AAACTGGCCGCCACTGCACCAGCTTTGCCCCAACCT...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTGAAGGGTGGTGGCTCTaGGGGTTGAGGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVEGWWL*GLREVG
Trigger: CCCAACCTCCCTCAACCCCCAGAGCCACCACCCTTC...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTCAGGAGGAAGGGTGGTaGCTCTGGGGGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFQEEGW*LWGLRE
Trigger: CTCCCTCAACCCCCAGAGCCACCACCCTTCCTCCTG...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTCCAGGGCCTCTGCGTaGTGGGAAAGGCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVSRASA*WERQWW
Trigger: CCACCACTGCCTTTCCCACCACGCAGAGGCCCTGGA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGTTGTAGGGGGCCTGTaGGAGGGTGAGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAVVGGL*EGEGVQ
Trigger: CTGGACCCCCTCACCCTCCCACAGGCCCCCTACAAC...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTAGCTCTCCAAGCTGGTaGCCTTGCTGGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSSSPSW*PCWASW
Trigger: CCAGGAGGCCCAGCAAGGCCACCAGCTTGGAGAGCT...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGCTCTCCAAGCTGGTaGCCTTGCTGGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCSSPSW*PCWASW
Trigger: CCAGGAGGCCCAGCAAGGCCACCAGCTTGGAGAGCT...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCTGGCCCTCGCTGGTaGTCCTTCTCACCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSSGPRW*SFSPCL
Trigger: GAGGCAAGGTGAGAAGGATCACCAGCGAGGGCCAGA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTCTGGCCCTCGCTGGTaGTCCTTCTCACCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVSGPRW*SFSPCL
Trigger: GAGGCAAGGTGAGAAGGATCACCAGCGAGGGCCAGA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCATGCACGCCTGACCACTaGGGGCAGAGAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLACTPDH*GQRAAV
Trigger: CACAGCAGCTCTCTGCCCTCAGTGGTCAGGCGTGCA...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTGGCCAGCAGCCCTTGTaGTGGGTTCTGAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSGQQPL*WVLRWW
Trigger: CCACCATCTCAGAACCCAGCACAAGGGCTGCTGGCC...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCAGAAGGAGTCTTCGTTTaGCTTCAAAGGACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPEGVFV*LQRTPA
Trigger: TGCTGGGGTCCTTTGAAGGCAAACGAAGACTCCTTC...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCATCCATGGTATGCCTGTaGTGTACAGGGGGTAAAGTG +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPSMVCL*CTGGKV
Trigger: CACTTTACCCCCTGTACAGCACAGGCATACCATGGA...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACACCAAGCCACAACCTaGTATCTGCACACCCCACAC +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGHQATT*YLHTPH
Trigger: GTGTGGGGTGTGCAGATAGCAGGTTGTGGCTTGGTG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCACACGCGGAGAGCCCCTaGCTGCTGGTCTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAHAESP*LLVFAQ
Trigger: CTGAGCAAAGACCAGCAGCCAGGGGCTCTCCGCGTG...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACAGCCTAACGGGATATaGATAGCGCTCCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGQPNGI*IALLHL
Trigger: CAGGTGGAGGAGCGCTATCCATATCCCGTTAGGCTG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGAAGGGTGGTGGCTCTaGGGGTTGAGGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAEGWWL*GLREVG
Trigger: CCCAACCTCCCTCAACCCCCAGAGCCACCACCCTTC...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTACCGAGTCACTGTTGTaGCTGGGGCAGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFTESLL*LGQEEG
Trigger: CCCTTCCTCCTGCCCCAGCCACAACAGTGACTCGGT...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTACCGCCCGGGACGTaGACCGAGTCACTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSLPPGT*TESLLW
Trigger: CCACAACAGTGACTCGGTCCACGTCCCGGGCGGTAA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTAGGGCCTCTGCGTGGTaGGAAAGGCAGTGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVRASAW*ERQWWS
Trigger: TGACCACCACTGCCTTTCCCACCACGCAGAGGCCCT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTGCTGGGTTCTGAGATaGTGGTGGGAGGGGCATTTG +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAECWVLR*WWEGHL
Trigger: CAAATGCCCCTCCCACCACCATCTCAGAACCCAGCA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATGTCCCGGAAACGGCCTaGGCCAGCAGCCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNVPETA*ASSPCA
Trigger: AGCACAAGGGCTGCTGGCCCAGGCCGTTTCCGGGAC...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCATGGCTTGGGAGGACCTaGCACCACATTTGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPWLGRT*HHIWVS
Trigger: CGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCA...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAGGGCATGGTGGAGCATaGCTGTGGTCCCAGCTAACT +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPGHGGA*LWSQLT
Trigger: AGTTAGCTGGGACCACAGCCATGCTCCACCATGCCC...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAGCCAGTCCCTTGTGCTaGCACAGGACGTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPASPLC*HRTSLK
Trigger: TTTAAGGGACGTCCTGTGTCAGCACAAGGGACTGGC...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACTTCTCTGGAGAGGCTaGAGGTTTGGTTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGLLWRG*RFGSSR
Trigger: TCTGGAGGAACCAAACCTTCAGCCTCTCCAGAGAAG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACATGAGGGGCTGAGATaGCCCATACTCTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGHEGLR*PILCSS
Trigger: GGAAGAACAGAGTATGGGTCATCTCAGCCCCTCATG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTGGGGCCTTGGTCGATaGCCTCGTACATGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSWGLGR*PRTWLP
Trigger: TGGAAGCCATGTACGAGGTCATCGACCAAGGCCCCA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGATCAGAGTGGACTCAGTaGGGAGTGAGAAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGSEWTQ*GVRRLF
Trigger: GAACAGCCTTCTCACTCCTCACTGAGTCCACTCTGA...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439685.6
CDS-3UTR GCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCAGTATCTCCATTTGTCTaGAGTTTCTCCTCGGTCTCG +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPVSPFV*SFSSVS
Trigger: CGAGACCGAGGAGAAACTGCAGACAAATGGAGATAC...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCACGGAGAGCCCCTGGCTaGTGGTCTTTGCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLARRAPG*WSLLRS
Trigger: AGACCTGAGCAAAGACCAGCAGCCAGGGGCTCTCCG...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAACAATCTGTTGGATGTaGCTCTCCGCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGTICWM*LSASSQ
Trigger: CTGTGAGCTGGCGGAGAGGCACATCCAACAGATTGT...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTGGGAGGTTTCTCCTTTaGTGGCTTGGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSGRFLL*WLGRTW
Trigger: CCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCC...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGCGCCTTTGGCTGCAGTaGCAGATTCTGGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAERLWLQ*QILVRI
Trigger: AATCCTCACCAGAATCTGGCACTGCAGCCAAAGGCG...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAATAGTGGCATGGGGGTaGGGTTCTGATCCACACACT +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGIVAWG*GSDPHT
Trigger: AGTGTGTGGATCAGAACCCCACCCCCATGCCACTAT...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAACTTTCCGTCCTCCGTaGCTGCCTCTAATAGTGGCA +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGTFRPP*LPLIVA
Trigger: TGCCACTATTAGAGGCAGCCACGGAGGACGGAAAGT...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGAGCCCCTGGCTGCTaGTCTTTGCTCAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFRAPGC*SLLRSH
Trigger: GTGAGACCTGAGCAAAGACCAGCAGCCAGGGGCTCT...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTGGATGTTGGGAGAGCTaGACCCCGAAGGGAAACGCA +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFGCWES*TPKGNA
Trigger: TGCGTTTCCCTTCGGGGTCCAGCTCTCCCAACATCC...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGAAGAGCACAATCTGTTaGATGTGCCTCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAEKSTIC*MCLSAS
Trigger: GCTGGCGGAGAGGCACATCCAACAGATTGTGCTCTT...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGGCTGCTCCAGGATCTaGCCCTCGCTGGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAGCSRI*PSLVIL
Trigger: AAGGATCACCAGCGAGGGCCAGATCCTGGAGCAGCC...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTCACTGTTGTGGCTaGGGCAGGAGGAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCSHCCG*GRRKGG
Trigger: ACCACCCTTCCTCCTGCCCCAGCCACAACAGTGACT...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTACCGAGTCACTGTTGTaGCTGGGGCAGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAATESLL*LGQEEG
Trigger: CCCTTCCTCCTGCCCCAGCCACAACAGTGACTCGGT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCATTACCGCCCGGGACGTaGACCGAGTCACTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLALPPGT*TESLLW
Trigger: CCACAACAGTGACTCGGTCCACGTCCCGGGCGGTAA...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCCTCCTGGTTGTCTGTaGCCTCTCCCTGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVPPGCL*PLPVLI
Trigger: GATCAGCACAGGGAGAGGCCACAGACAACCAGGAGG...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTCAGCAGCCCTTGTGCTaGGTTCTGAGATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCQQPLC*VLRWWW
Trigger: CCACCACCATCTCAGAACCCAGCACAAGGGCTGCTG...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTACATTTGGGTCTCGGTaGCCATGTTCCCGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVTFGSR*PCSRLS
Trigger: GGACAGGCGGGAACATGGCCACCGAGACCCAAATGT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTTGGCTTGGGAGGACCTaGCACCACATTTGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCWLGRT*HHIWVS
Trigger: CGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCA...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCATCCTCCACCGGAACCTaGATAGGAAGTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPSSTGT*IGSSPG
Trigger: CCCTGGAGAACTTCCTATCCAGGTTCCGGTGGAGGA...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATATGTCTTTCACCAAATaGGCTGGTACGTCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDMSFTK*AGTSSR
Trigger: GCGAGAAGACGTACCAGCCCATTTGGTGAAAGACAT...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAGGTGGAGCATGGCTGTaGTCCCAGCTAACTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPGGAWL*SQLTWD
Trigger: ATCCCAAGTTAGCTGGGACCACAGCCATGCTCCACC...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGAGCCTCCTGAATAGCTaGGACCACAGACACACACCA +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAESLLNS*DHRHTP
Trigger: TGGTGTGTGTCTGTGGTCCCAGCTATTCAGGAGGCT...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCACTTCTCTGGAGAGGCTaGAGGTTTGGTTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPLLWRG*RFGSSR
Trigger: TCTGGAGGAACCAAACCTTCAGCCTCTCCAGAGAAG...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGATCACGGCGGCCCCATTaGTGTCCGAGCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRSRRPH*CPSGLA
Trigger: CGCCAGCCCGCTCGGACATCAATGGGGCCGCCGTGA...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAGGACCCCTCATCTCTaGTCATCTCACGCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAARTPHL*SSHAES
Trigger: GCTCTCCGCGTGAGATGATCAGAGATGAGGGGTCCT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCATCAGCAGGCTCATCATaGGGCGGTAGTAGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLASAGSS*GGSSLP
Trigger: CGGAAGGCTACTACCGCCTCATGATGAGCCTGCTGA...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCATGGGGCCTTGGTCGATaGCCTCGTACATGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAWGLGR*PRTWLP
Trigger: TGGAAGCCATGTACGAGGTCATCGACCAAGGCCCCA...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCATGGGAGGGGCATTTGTaGAGCTCTCCAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPWEGHL*SSPSWW
Trigger: CCACCAGCTTGGAGAGCTTCACAAATGCCCCTCCCA...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTGGCAGAGAGCTGCTGTaGATAGGCCCAGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCGRELL*IGPVFI
Trigger: GATGAAGACTGGGCCTATTCACAGCAGCTCTCTGCC...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTGGCAGAGAGCTGCTGTaGATAGGCCCAGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFGRELL*IGPVFI
Trigger: GATGAAGACTGGGCCTATTCACAGCAGCTCTCTGCC...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGCGCATCCCCAGTaGCTGCTGAATCGCCATTTC +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAAAHPQ*LLNRHF
Trigger: GAAATGGCGATTCAGCAGTCACTGGGGATGCGCTGC...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGGCAGGAGAATCACTTaGACCCCGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAGRRIT*TPEAEV
Trigger: AACCTCTGCCTCCGGGGTTCAAGTGATTCTCCTGCC...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATGGCCTCCTTAGTCCCTaGGACACAATATTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDGLLSP*DTILKV
Trigger: TACTTTCAATATTGTGTCTCAGGGACTAAGGAGGCC...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTACCGAGCTGGCCTACTaGTGTCCGGAGAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVTELAY*CPEKPK
Trigger: CTTTGGTTTCTCCGGACAGCAGTAGGCCAGCTCGGT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTCTTTCTTCTTCTCGCTaGCCAGGCTTGGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSLSSSR*PGLAFL
Trigger: CAGGAAGGCCAAGCCTGGGCAGCGAGAAGAAGAAAG...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTTGGGGCAAAGCTGGTaGAGTGGCGGCCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFLGQSW*SGGQFS
Trigger: AGAAAACTGGCCGCCACTGCACCAGCTTTGCCCCAA...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGGGAGGTTTCTCCTTTaGTGGCTTGGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAGRFLL*WLGRTW
Trigger: CCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCC...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAGAAGGAGTCTTCGTTTaGCTTCAAAGGACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGEGVFV*LQRTPA
Trigger: TGCTGGGGTCCTTTGAAGGCAAACGAAGACTCCTTC...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCATGTAGTTTTAGCAGCTaGAGAGGAAACTGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPCSFSS*RGNWLS
Trigger: ACTCAGCCAGTTTCCTCTGCAGCTGCTAAAACTACA...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTGGTCTGCTCAGGGGCTaGCCAGTTTGTCCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFGLLRG*PVCPSF
Trigger: AAAGCTTGGACAAACTGGGCAGCCCCTGAGCAGACC...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCACCTCAGAAACCGAGCTaGCCTACTGCTGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAPQKPS*PTAVRR
Trigger: TCTCCGGACAGCAGTAGGCCAGCTCGGTTTCTGAGG...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAGAGCCCCTGGCTGCTaGTCTTTGCTCAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAARAPGC*SLLRSH
Trigger: GTGAGACCTGAGCAAAGACCAGCAGCCAGGGGCTCT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAGGATGTTGGGAGAGCTaGACCCCGAAGGGAAACGCA +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPGCWES*TPKGNA
Trigger: TGCGTTTCCCTTCGGGGTCCAGCTCTCCCAACATCC...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAAGCTGGCAAGGATGTTaGGAGAGCTGGACCCCGAAG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLASWQGC*ESWTPK
Trigger: CTTCGGGGTCCAGCTCTCCCAACATCCTTGCCAGCT...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCACCCGACTCTCTCTaGTTGGTGGGACTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSSPDSL*LVGLVL
Trigger: GAGCACAAGTCCCACCAACCAGAGAGAGTCGGGTGA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTCACCCGACTCTCTCTaGTTGGTGGGACTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVSPDSL*LVGLVL
Trigger: GAGCACAAGTCCCACCAACCAGAGAGAGTCGGGTGA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAGTCACTGTTGTGGCTaGGGCAGGAGGAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAASHCCG*GRRKGG
Trigger: ACCACCCTTCCTCCTGCCCCAGCCACAACAGTGACT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCCAGCAGCCCTTGTGCTaGGTTCTGAGATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIQQPLC*VLRWWW
Trigger: CCACCACCATCTCAGAACCCAGCACAAGGGCTGCTG...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAACATTTGGGTCTCGGTaGCCATGTTCCCGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPTFGSR*PCSRLS
Trigger: GGACAGGCGGGAACATGGCCACCGAGACCCAAATGT...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTTCTCCTTTGCTGGCTTaGGAGGACCTGGCACCACAT +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCSPLLA*EDLAPH
Trigger: ATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGA...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCCTCCACCGGAACCTaGATAGGAAGTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSSSTGT*IGSSPG
Trigger: CCCTGGAGAACTTCCTATCCAGGTTCCGGTGGAGGA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGCGCAGTGTGGAAGAATaGAGCTGGCCACATGTAGTT +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAERSVEE*SWPHVV
Trigger: AACTACATGTGGCCAGCTCCATTCTTCCACACTGCG...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCAAGGATGGCTGGGCATaGTGGAGCATGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIKDGWA*WSMAVV
Trigger: GACCACAGCCATGCTCCACCATGCCCAGCCATCCTT...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCAGGAAGAGGGATGAGATaGGAGCATAATTCACACACT +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPGRGMR*EHNSHT
Trigger: AGTGTGTGAATTATGCTCCCATCTCATCCCTCTTCC...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAGAAAATGGGACCAGCTaGGTTGCACCCACTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPENGTS*VAPTPL
Trigger: CAGGGGAGTGGGTGCAACCCAGCTGGTCCCATTTTC...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 72 bp GATGAGGGGTTCTGTGTGTTGGAGGTGATGACCTCATaGAGTCTCAGCCACAGCAGGGCATTATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: DEGFCVLEVMTS*SLSHSRALCRK
Trigger: TTTCCTGCATAATGCCCTGCTGTGGCTGAGACTCAATGAGGTCATCACCTCCAACACACAGAACCCCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTCTCTTTACCGAGGGTaGGCAATACAAAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAESLYRG*AIQKGC
Trigger: ACACCCCTTTTGTATTGCTCACCCTCGGTAAAGAGA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCATGAGGGGCTGAGATaGCCCATACTCTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVHEGLR*PILCSS
Trigger: GGAAGAACAGAGTATGGGTCATCTCAGCCCCTCATG...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTCAAAGCCCTTCTGCCTaGTCTTCTCGATCCTACGGA +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFQSPSA*SSRSYG
Trigger: TCCGTAGGATCGAGAAGATCAGGCAGAAGGGCTTTG...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTCAAAGCCCTTCTGCCTaGTCTTCTCGATCCTACGGA +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSQSPSA*SSRSYG
Trigger: TCCGTAGGATCGAGAAGATCAGGCAGAAGGGCTTTG...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTATCCCCAGTGACTGCTaGATCGCCATTTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVIPSDC*IAISCL
Trigger: GAGACAGGAAATGGCGATTCAGCAGTCACTGGGGAT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATGCAGCGCATCCCCAGTaGCTGCTGAATCGCCATTTC +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNAAHPQ*LLNRHF
Trigger: GAAATGGCGATTCAGCAGTCACTGGGGATGCGCTGC...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGATTGTTTGAGGGAAGCTaGGTTTGCAGTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGLFEGS*VCSEPR
Trigger: TCTTGGCTCACTGCAAACTCAGCTTCCCTCAAACAA...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATCCAAATGATGATCTATaGCTTCTCTGCCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDPNDDL*LLCLLI
Trigger: AATGAGCAGGCAGAGAAGTCATAGATCATCATTTGG...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCATCTGGAACTGGGTTCTaGACTGAGAAGTCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPSGTGF*TEKSGF
Trigger: GAACCCAGACTTCTCAGTTCAGAACCCAGTTCCAGA...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTGGGGGAAGGAAAATaGGGCTTGTCTACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVLGEGK*GLSTAG
Trigger: CCCTGCTGTAGACAAGCCTCATTTTCCTTCCCCCAA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGGACTCAGTGAGGAGTaGGAAGGCTGTTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAGLSEE*EGCSLG
Trigger: CCCCAAAGAACAGCCTTCTCACTCCTCACTGAGTCC...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439685.6
CDS-3UTR GCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCAGGACTACCTCAGTTTTaGTCCAAACCAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPGLPQF*SKPNSN
Trigger: GTTTGAGTTTGGTTTGGAGCAAAACTGAGGTAGTCC...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTCGTGTGTCTGTGTGTaGCAGTCCCTTGTGCTGACA +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVSCVCV*QSLVLT
Trigger: TGTCAGCACAAGGGACTGGCACACACAGACACACGA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTGCACCATGCCAAACTTaGCCTTCTCCAGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVAPCQT*PSPASG
Trigger: TCCTGAAGCTGGAGAAGGGCAAGTTTGGCATGGTGC...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCACTTTCTTCTTCTCGCTaGCCAGGCTTGGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLALSSSR*PGLAFL
Trigger: CAGGAAGGCCAAGCCTGGGCAGCGAGAAGAAGAAAG...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTATTGGGGCAAAGCTGGTaGAGTGGCGGCCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVLGQSW*SGGQFS
Trigger: AGAAAACTGGCCGCCACTGCACCAGCTTTGCCCCAA...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGGTGGTCATAGGTCTTaGAGCAACTGTTACCGCCCG +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVGGHRS*SNCYRP
Trigger: CGGGCGGTAACAGTTGCTGCAAGACCTATGACCACC...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTCCAAGATTGCACTACTaGACTGCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSPRLHY*TAAWVT
Trigger: TGTCACCCAGGCTGCAGTGCAGTAGTGCAATCTTGG...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCACGTGGCTCACTTTCCTaGACACCTCAGGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLARGSLS*TPQAAC
Trigger: ACAAGCTGCCTGAGGTGTGCAGGAAAGTGAGCCACG...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCACCACAACCTGCTATCTaGACACCCCACACCATGAGG +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPPQPAI*TPHTMR
Trigger: CCTCATGGTGTGGGGTGTGCAGATAGCAGGTTGTGG...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTCTGGTCCCTTCCACCTaGCAAACCCCCATAAAAACC +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSLVPST*QTPIKT
Trigger: GGTTTTTATGGGGGTTTGGCAGGTGGAAGGGACCAG...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTACTTTCCGTCCTCCGTaGCTGCCTCTAATAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVTFRPP*LPLIVA
Trigger: TGCCACTATTAGAGGCAGCCACGGAGGACGGAAAGT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTCTTCCCTGCAAAGCTaGCAAGGATGTTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFSSLQS*QGCWES
Trigger: GCTCTCCCAACATCCTTGCCAGCTTTGCAGGGAAGA...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTCAGCCTAACGGGATATaGATAGCGCTCCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAQPNGI*IALLHL
Trigger: CAGGTGGAGGAGCGCTATCCATATCCCGTTAGGCTG...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTACTACGGATGGGGCCTTaGTCGATGACCTCGTACATG +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVLRMGP*SMTSYM
Trigger: CATGTACGAGGTCATCGACCAAGGCCCCATCCGTAG...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTCTACGGATGGGGCCTTaGTCGATGACCTCGTACATG +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAALRMGP*SMTSYM
Trigger: CATGTACGAGGTCATCGACCAAGGCCCCATCCGTAG...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAAAGCTGGTGCAGTaGCGGCCAGTTTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAAKLVQ*RPVFSG
Trigger: TCCTGAGAAAACTGGCCGCCACTGCACCAGCTTTGC...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACATCCACCACTCGCATaGGCTTCTCATTATCTAGCT +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGHPPLA*ASHYLA
Trigger: AGCTAGATAATGAGAAGCCCATGCGAGTGGTGGATG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCATTCAGAATGGTTATGTaGCGCAGACCAAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPFRMVM*RRPKLH
Trigger: GTGCAATTTTGGTCTGCGCCACATAACCATTCTGAA...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTTTCACCAAATGGGCTaGTACGTCTTCTCGCTCAAC +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAEFHQMG*YVFSLN
Trigger: GTTGAGCGAGAAGACGTACCAGCCCATTTGGTGAAA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGCGTACACAATCACCATaGACCACATTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAERTQSP*TTLGKD
Trigger: ATCCTTCCCCAATGTGGTCCATGGTGATTGTGTACG...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCACTTGGGATGCTGAGGTaGGAGGATTGTTTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPLGMLR*EDCLRE
Trigger: TTCCCTCAAACAATCCTCCCACCTCAGCATCCCAAG...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTCAGTACACTTCGACGTaGCTCACTTTCCTGCACACC +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCQYTST*LTFLHT
Trigger: GGTGTGCAGGAAAGTGAGCCACGTCGAAGTGTACTG...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAGCCCCTCACTGCTCCTaGCTCCCTCATTATTATATT +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGAPHCS*LPHYYI
Trigger: AATATAATAATGAGGGAGCCAGGAGCAGTGAGGGGC...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAGATGATGGAGTGCTGTaGCACGATCACGGCACACTG +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPDDGVL*HDHGTL
Trigger: CAGTGTGCCGTGATCGTGCCACAGCACTCCATCATC...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCTTGGGACTCTGCGTaGAGTGTTTGTTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSSWDSA*SVCWWV
Trigger: AACCCACCAACAAACACTTCACGCAGAGTCCCAAGA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACCTCATAGTATTGCTTaGCTCTCAGATCCACATCTG +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGPHSIA*LSDPHL
Trigger: CAGATGTGGATCTGAGAGTCAAGCAATACTATGAGG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATCCAAAATTGCACGCCTaGCCACTGAGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDPKLHA*PLRAES
Trigger: GCTCTCTGCCCTCAGTGGTCAGGCGTGCAATTTTGG...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATACCGAGCTGGCCTACTaGTGTCCGGAGAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNTELAY*CPEKPK
Trigger: CTTTGGTTTCTCCGGACAGCAGTAGGCCAGCTCGGT...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGACTAGGGTCCAGGGGCTaGTCCAGGATCTGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRLGSRG*SRIWPS
Trigger: CGAGGGCCAGATCCTGGAGCAGCCCCTGGACCCTAG...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTCTTCAGCAGCACCATaGCAAACTTGCCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVSSAAP*QTCPSP
Trigger: TGGAGAAGGGCAAGTTTGGCATGGTGCTGCTGAAGA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATAGGATTATACTCCTTTaGATTCCAGCTACTTTGGTC +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDRIILL*IPATLV
Trigger: GACCAAAGTAGCTGGAATGCAAAGGAGTATAATCCT...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGTGAGCCAAGATTaGACTACTGCACTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAAVSQD*TTALQP
Trigger: AGGCTGCAGTGCAGTAGTGCAATCTTGGCTCACTGC...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTGAAGAGGATGACTGGTaGCTTAACCCCTTCCAAACC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVEEDDW*LNPFQT
Trigger: GGTTTGGAAGGGGTTAAGGCACCAGTCATCCTCTTC...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439685.6
CDS-3UTR CCA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCACATTGTGTAATCCAATaGTGGCTCATAGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPHCVIQ*WLIEME
Trigger: TTCCATCTCTATGAGCCACCATTGGATTACACAATG...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAATAGTGGCATGGGGGTaGGGTTCTGATCCACACACT +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPIVAWG*GSDPHT
Trigger: AGTGTGTGGATCAGAACCCCACCCCCATGCCACTAT...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTACCTCTAATAGTGGCATaGGGGTGGGGTTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVPLIVA*GWGSDP
Trigger: TGGATCAGAACCCCACCCCCATGCCACTATTAGAGG...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTTCCGACTAGAAGCATaGAGAAGTACTCCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFFRLEA*RSTPGS
Trigger: TGAGCCCGGAGTACTTCTCCATGCTTCTAGTCGGAA...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTTTCCGACTAGAAGCATaGAGAAGTACTCCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCFRLEA*RSTPGS
Trigger: TGAGCCCGGAGTACTTCTCCATGCTTCTAGTCGGAA...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATGCCTTACTGCTGATATaGAGAAACTTTGAGTCATCT +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDALLLI*RNFESS
Trigger: AGATGACTCAAAGTTTCTCCATATCAGCAGTAAGGC...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATTGGTCCCAGCTAACTTaGGATGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNWSQLT*DAEVGG
Trigger: TCCTCCCACCTCAGCATCCCAAGTTAGCTGGGACCA...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATTTCTCATTATCTAGCTaGAAGTGGTCGATTTTCATG +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDFSLSS*KWSIFM
Trigger: CATGAAAATCGACCACTTTCAGCTAGATAATGAGAA...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTGCAACAAAGCCTGAATaGCAGCATGTCTATGGACAG +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVATKPE*QHVYGQ
Trigger: CTGTCCATAGACATGCTGTCATTCAGGCTTTGTTGC...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTGGAGCAACAAAGCCTaGATGACAGCATGTCTATGG +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVWSNKA*MTACLW
Trigger: CCATAGACATGCTGTCATTCAGGCTTTGTTGCTCCA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATACAATCTGTTGGATGTaGCTCTCCGCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNTICWM*LSASSQ
Trigger: CTGTGAGCTGGCGGAGAGGCACATCCAACAGATTGT...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCTCTTCAGCAGCACCATaGCAAACTTGCCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLISSAAP*QTCPSP
Trigger: TGGAGAAGGGCAAGTTTGGCATGGTGCTGCTGAAGA...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAACACAATACCTATTGTaGAGCACAGGAATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TQCGRMELATCSFSSCRGTQYLL*STGIKE
Trigger: CTCCTTGATTCCTGTGCTGCACAATAGGTATTGTGT...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATCCTCTAATAGTGGCATaGGGGTGGGGTTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNPLIVA*GWGSDP
Trigger: TGGATCAGAACCCCACCCCCATGCCACTATTAGAGG...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTATTGGTTCCTCCAGAGTaGATCTCTCAATTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVLVPPE*ISQFRE
Trigger: CTCGCGGAATTGAGAGATCCACTCTGGAGGAACCAA...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATTCTTCCCTGCAAAGCTaGCAAGGATGTTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNSSLQS*QGCWES
Trigger: GCTCTCCCAACATCCTTGCCAGCTTTGCAGGGAAGA...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATAAGAGCACAATCTGTTaGATGTGCCTCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNKSTIC*MCLSAS
Trigger: GCTGGCGGAGAGGCACATCCAACAGATTGTGCTCTT...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCATCCACCACTCGCATaGGCTTCTCATTATCTAGCT +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVHPPLA*ASHYLA
Trigger: AGCTAGATAATGAGAAGCCCATGCGAGTGGTGGATG...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCGCTGATGAGACGCTaGTCTACCAAGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSSLMRR*STKSSS
Trigger: TGATGAAGACTTGGTAGACCAGCGTCTCATCAGCGA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTATGTCTTTCACCAAATaGGCTGGTACGTCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVMSFTK*AGTSSR
Trigger: GCGAGAAGACGTACCAGCCCATTTGGTGAAAGACAT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTCACCATGGACCACATTaGGGAAGGATACCAGGATTT +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCHHGPH*GRIPGF
Trigger: AAATCCTGGTATCCTTCCCCAATGTGGTCCATGGTG...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTCGCAGTGTGGAAGAATaGAGCTGGCCACATGTAGTT +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAARSVEE*SWPHVV
Trigger: AACTACATGTGGCCAGCTCCATTCTTCCACACTGCG...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTAAAGAAGCAAGGATaGCTGGGCATGGTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVVKKQG*LGMVEH
Trigger: ATGCTCCACCATGCCCAGCCATCCTTGCTTCTTTAC...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCTTCATCCGGCTCCCTTaGCATATGTATCAGCCCATG +
Preference number: 4 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIFIRLP*HMYQPM
Trigger: CATGGGCTGATACATATGCCAAGGGAGCCGGATGAA...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATTTACTCTTTAACATTTaGGGGAAGGAAAATGAGGCT +
Preference number: 4 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDLLFNI*GKENEA
Trigger: AGCCTCATTTTCCTTCCCCCAAATGTTAAAGAGTAA...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTAGGTCTTCCCAAATTTaGGCATATTCCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVRSSQI*AYSCLC
Trigger: GCAGAGGCAGGAATATGCCCAAATTTGGGAAGACCT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCCTCATAGTATTGCTTaGCTCTCAGATCCACATCTG +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVPHSIA*LSDPHL
Trigger: CAGATGTGGATCTGAGAGTCAAGCAATACTATGAGG...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAAAGGATACCAGGATTTaGCATTTCCGTCTTTTCCGA +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPKDTRI*HFRLFR
Trigger: TCGGAAAAGACGGAAATGTCAAATCCTGGTATCCTT...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAAGCTGAGTTTGCAGTaGGCCAAGATTGCACTACTG +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAKLSLQ*AKIALL
Trigger: CAGTAGTGCAATCTTGGCTCACTGCAAACTCAGCTT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTCACACACTAAGAACTaGGTTCTAAAGTCACTTGAG +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAESHTKN*VLKSLE
Trigger: CTCAAGTGACTTTAGAACTCAGTTCTTAGTGTGTGA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCACCAGATTATAGGCTTTaGGGACATTCACCAATAGCA +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPPDYRL*GHSPIA
Trigger: TGCTATTGGTGAATGTCCTCAAAGCCTATAATCTGG...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATTTAAGAAGGGCCCACTaGGGCCATCATTCACCCTAC +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDLRRAH*GHHSPY
Trigger: GTAGGGTGAATGATGGCCTCAGTGGGCCCTTCTTAA...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCACCACACATTCAGTACTaGGACACATTAAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAPHIQY*DTLRRA
Trigger: GGCCCTTCTTAATGTGTCTCAGTACTGAATGTGTGG...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATCACCTTGACCTGAAGTaGAGAGCACTCACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDHLDLK*RALTKP
Trigger: TGGCTTGGTGAGTGCTCTTCACTTCAGGTCAAGGTG...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTCCAGTGGCCTTTTCATaGTACCCATTTCTGTGTATC +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFPVAFS*YPFLCI
Trigger: GATACACAGAAATGGGTATCATGAAAAGGCCACTGG...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCGAAGTCTGGGTTCCCTaGGAATTGGACATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIEVWVP*ELDISS
Trigger: TGAACTGATGTCCAATTCTCAGGGAACCCAGACTTC...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAAGGAGAAACTGTGCCTaGACTGTGAGTATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLARRNCA*TVSIQK
Trigger: CTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCT...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAATACAAAAGGGGTGTaGTGCAGCTCCAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAANTKGV*CSSSFQ
Trigger: CTGAAAGCTGGAGCTGCAGCACACCCCTTTTGTATT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGACGGAGAGCCCCTGGCTaGTGGTCTTTGCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRRRAPG*WSLLRS
Trigger: AGACCTGAGCAAAGACCAGCAGCCAGGGGCTCTCCG...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTGTAGTTTTAGCAGCTaGAGAGGAAACTGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFCSFSS*RGNWLS
Trigger: ACTCAGCCAGTTTCCTCTGCAGCTGCTAAAACTACA...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTATGTGTCTGGACCTCCTaGCTATGTAGCAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVCVWTS*LCSRKG
Trigger: TCCTTTTCTGCTACATAGGCAGGAGGTCCAGACACA...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAATTTGGGCATATTCCTaGCTCTGCCTACCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVIWAYS*LCLPCS
Trigger: AGAACAGGGTAGGCAGAGGCAGGAATATGCCCAAAT...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCACTAAAAGCTTCAGAATaGTTATGTGGCGCAGACCAA +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPLKASE*LCGADQ
Trigger: TTGGTCTGCGCCACATAACCATTCTGAAGCTTTTAG...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTTTTCACCAAATGGGCTaGTACGTCTTCTCGCTCAAC +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAFHQMG*YVFSLN
Trigger: GTTGAGCGAGAAGACGTACCAGCCCATTTGGTGAAA...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCACGTACACAATCACCATaGACCACATTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPRTQSP*TTLGKD
Trigger: ATCCTTCCCCAATGTGGTCCATGGTGATTGTGTACG...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCTGCAGAGGAAACTaGCTGAGTCTAAGGTTACAT +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFSCRGN*LSLRLH
Trigger: ATGTAACCTTAGACTCAGCCAGTTTCCTCTGCAGCT...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGCTGCAGAGGAAACTaGCTGAGTCTAAGGTTACAT +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCSCRGN*LSLRLH
Trigger: ATGTAACCTTAGACTCAGCCAGTTTCCTCTGCAGCT...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTTGTGGCCAATATTACTaGACTCCCGTGGTATCAAGT +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCCGQYY*TPVVSS
Trigger: ACTTGATACCACGGGAGTCCAGTAATATTGGCCACA...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGCTTGGTACTTTCTCTaGCTTTTGTGGCCAATATTA +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAEAWYFL*LLWPIL
Trigger: TAATATTGGCCACAAAAGCCAGAGAAAGTACCAAGC...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTCCTGTAATATCTCCATaGTATGCCTGTGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFPVISP*YACAVQ
Trigger: CTGTACAGCACAGGCATACCATGGAGATATTACAGG...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCATTCACCTCAGAGCCCTaGGAGATGTCTGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPFTSEP*EMSDEK
Trigger: CTTTTCATCAGACATCTCCCAGGGCTCTGAGGTGAA...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGGGTTCCCTGAGAATTaGACATCAGTTCAACCACAG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAGFPEN*TSVQPQ
Trigger: CTGTGGTTGAACTGATGTCCAATTCTCAGGGAACCC...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAATATGTATCAGCCCATaGATTGGGAGGTGTAGGACC +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPICISP*IGRCRT
Trigger: GGTCCTACACCTCCCAATCCATGGGCTGATACATAT...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAGAGCTGATCCTTACATaGGCAGTAGACTATAAGTGT +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPELILT*AVDYKC
Trigger: ACACTTATAGTCTACTGCCCATGTAAGGATCAGCTC...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTAGAAGAGGATGACTaGTGCCTTAACCCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSLEEDD*CLNPFQ
Trigger: TTGGAAGGGGTTAAGGCACCAGTCATCCTCTTCTAA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439685.6
3UTR CAA 72 bp GCAGGGCAGGAAGTGGCTATGATAACAAAGCTGGGCTaGGTACTTTCTCTGGCTTTTGTGGCCAATATTACT +
Preference number: 4 (lower is better)
Translates to: AGQEVAMITKLG*VLSLAFVANIT
Trigger: AGTAATATTGGCCACAAAAGCCAGAGAAAGTACCAAGCCCAGCTTTGTTATCATAGCCACTTCCTGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATTCTGGACAAGTAGGATaGGGTGAAAGGAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDSGQVG*GERSCP
Trigger: AGGACAGCTCCTTTCACCTCATCCTACTTGTCCAGA...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTTCTCATTATCTAGCTaGAAGTGGTCGATTTTCATG +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAEFSLSS*KWSIFM
Trigger: CATGAAAATCGACCACTTTCAGCTAGATAATGAGAA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCATCTGTTAGCACCATaGAGAAGTCATTGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVHLLAP*RSHCRS
Trigger: TGACCTACAATGACTTCTTCATGGTGCTAACAGATG...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTAGTTCTAAAGTCACTTaGGCTTTCTGGAGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSSSKVT*AFWSSV
Trigger: AACTGAGCTCCAGAAAGCTCAAGTGACTTTAGAACT...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTAAGTTCTCCAGGGACTaGTTTTTGTCCTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVKFSRD*FLSSLQ
Trigger: TTGCAAAGAGGACAAAAAGCAGTCCCTGGAGAACTT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGAAGGTTACATATTTCTaGTCAGTAAGGGTATCCATG +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAEKVTYF*SVRVSM
Trigger: CATGGATACCCTTACTGAGCAGAAATATGTAACCTT...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATAATATCTCCATGGTATaGCTGTGCTGTACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNNISMV*LCCTGG
Trigger: ACCCCCTGTACAGCACAGGCATACCATGGAGATATT...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTCATCATGATGCTAAATaGCTATCTGAGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAHHDAK*LSEGKL
Trigger: GAGCTTCCCCTCAGATAGGCATTTAGCATCATGATG...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTGGCAACTTTGGGCTATaGTTCATCCTGGCAAAAATT +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSGNFGL*FILAKI
Trigger: AATTTTTGCCAGGATGAAGCATAGCCCAAAGTTGCC...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCACTTCAGGAGAAACTGTaGCTGAACTGTGAGTATCCA +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPLQEKL*LNCEYP
Trigger: TGGATACTCACAGTTCAGGCACAGTTTCTCCTGAAG...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGAATTATTTTTCCTACTaGAGAGCTTCTTCACGTTGG +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAENYFSY*RASSRW
Trigger: CCAACGTGAAGAAGCTCTGCAGTAGGAAAAATAATT...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCCATCATAAATCCCACTaGCCTTATCTTGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIHHKSH*PYLGPK
Trigger: CTTTGGGCCAAGATAAGGGCAGTGGGATTTATGATG...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATTTGGTTCCTCCAGAGTaGATCTCTCAATTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDLVPPE*ISQFRE
Trigger: CTCGCGGAATTGAGAGATCCACTCTGGAGGAACCAA...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTCTAAGAATTTTGTCCTaGGCCTTCTTTTTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSLRILS*AFFLGG
Trigger: ACCTCCCAAAAAGAAGGCCCAGGACAAAATTCTTAG...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTCAGAATGGTTATGTaGCGCAGACCAAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSFRMVM*RRPKLH
Trigger: GTGCAATTTTGGTCTGCGCCACATAACCATTCTGAA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCTAAAAGCTTCAGAATaGTTATGTGGCGCAGACCAA +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVLKASE*LCGADQ
Trigger: TTGGTCTGCGCCACATAACCATTCTGAAGCTTTTAG...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAGAAGGTAGCAGAGTCTaGTTCATGAGTTTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPEGSRV*FMSLKK
Trigger: TTTCTTCAAACTCATGAACCAGACTCTGCTACCTTC...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTTTTCCCAAGTCCAGTaGCCTTTTCATGATACCCAT +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFFSQVQ*PFHDTH
Trigger: ATGGGTATCATGAAAAGGCCACTGGACTTGGGAAAA...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATGCTGTCTTCCAGAAATaGTTTCCCAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNAVFQK*FPKVFP
Trigger: AGGGAACACCTTGGGAAACCATTTCTGGAAGACAGC...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTGTCTTTATGTCTGTCTaGTCATGTTATCAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVVFMSV*SCYQPV
Trigger: GACTGGCTGATAACATGACCAGACAGACATAAAGAC...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTGGCTGTTCTTTGGGGTaGGGTAAAGTTTTTAAACTC +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSGCSLG*GKVFKL
Trigger: GAGTTTAAAAACTTTACCCCACCCCAAAGAACAGCC...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439685.6
CDS-3UTR TCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAGCTTCTCCATATCTTTaGTTCGGGACTGGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPASPYL*FGTGKY
Trigger: ATACTTTCCAGTCCCGAATCAAAGATATGGAGAAGC...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGCTTCTCCATATCTTTaGTTCGGGACTGGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVASPYL*FGTGKY
Trigger: ATACTTTCCAGTCCCGAATCAAAGATATGGAGAAGC...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAAAGGATACCAGGATTTaGCATTTCCGTCTTTTCCGA +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVKDTRI*HFRLFR
Trigger: TCGGAAAAGACGGAAATGTCAAATCCTGGTATCCTT...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR TCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGACTCACTTCAGCCTCCTaGATAGCTGGGACCACAGAC +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRLTSAS*IAGTTD
Trigger: GTCTGTGGTCCCAGCTATTCAGGAGGCTGAAGTGAG...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCTGTTCTCTACTAGTCTaGGCCTCTGTACAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLICSLLV*ASVQRN
Trigger: ATTTCTCTGTACAGAGGCTCAGACTAGTAGAGAACA...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTTTCACGTTGGAATGGTaGATAGGTACACATTTCTCA +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCFTLEW*IGTHFS
Trigger: TGAGAAATGTGTACCTATTCACCATTCCAACGTGAA...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGGACTACCTCAGTTTTaGTCCAAACCAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVGLPQF*SKPNSN
Trigger: GTTTGAGTTTGGTTTGGAGCAAAACTGAGGTAGTCC...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTTCTTCTTTCTCTTaGCTGGATTCAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVFSSFS*LDSVPE
Trigger: TTCTGGGACTGAATCCAGGCAAGAGAAAGAAGAAAA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTCTTCTTTCTCTTaGCTGGATTCAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSFSSFS*LDSVPE
Trigger: TTCTGGGACTGAATCCAGGCAAGAGAAAGAAGAAAA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGAGGTGGTCATAGGTCTTaGAGCAACTGTTACCGCCCG +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRGGHRS*SNCYRP
Trigger: CGGGCGGTAACAGTTGCTGCAAGACCTATGACCACC...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTCTTATTTTAAGAAATTaGCACCATCACCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFLILRN*HHHPQP
Trigger: AGGTTGGGGGTGATGGTGGCAATTTCTTAAAATAAG...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTAAGAAATCAGAAGTTTaGTTCCCAGGACAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSKKSEV*FPGQFP
Trigger: AGGAAACTGTCCTGGGAACCAAACTTCTGATTTCTT...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTTGTGTAATCCAATGGTaGCTCATAGAGATGGAATGC +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAACVIQW*LIEMEC
Trigger: GCATTCCATCTCTATGAGCCACCATTGGATTACACA...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGATGCTGGGTTCTGAGATaGTGGTGGGAGGGGCATTTG +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRCWVLR*WWEGHL
Trigger: CAAATGCCCCTCCCACCACCATCTCAGAACCCAGCA...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCACTAAGAATTTTGTCCTaGGCCTTCTTTTTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLALRILS*AFFLGG
Trigger: ACCTCCCAAAAAGAAGGCCCAGGACAAAATTCTTAG...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAATGACAGCATGTCTATaGACAGCATGGTTTACTGGA +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPMTACL*TAWFTG
Trigger: TCCAGTAAACCATGCTGTCCATAGACATGCTGTCAT...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTGAAACAGCCTTATATTaGAAGAAGATGCCATCTCAG +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFETALY*KKMPSQ
Trigger: CTGAGATGGCATCTTCTTCCAATATAAGGCTGTTTC...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCATGCTATTATAATTACTaGGGGCACCATGAACCACAC +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPCYYNY*GHHEPH
Trigger: GTGTGGTTCATGGTGCCCCCAGTAATTATAATAGCA...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCACAAATTGAAGGTTTGTaGCAACCCTGCATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAQIEGL*QPCIKE
Trigger: TTCCTTGATGCAGGGTTGCCACAAACCTTCAATTTG...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTCAGTTTTGTATTCCTaGTTCCTGGAAAAGTACATA +
Preference number: 4 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAESVLYS*FLEKYI
Trigger: TATGTACTTTTCCAGGAACCAGGAATACAAAACTGA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGAAAACACAGGAATGTaGTGTCGAAAAGGGACTTTT +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAENTGM*CRKGTF
Trigger: AAAAGTCCCTTTTCGACATCACATTCCTGTGTTTTC...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATCATCTGTTAGCACCATaGAGAAGTCATTGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNHLLAP*RSHCRS
Trigger: TGACCTACAATGACTTCTTCATGGTGCTAACAGATG...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAAGAAAGTGATTTCTTaGGATGGAATCTACTCGCGT +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAKKVIS*DGIYSR
Trigger: ACGCGAGTAGATTCCATCTCAAGAAATCACTTTCTT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGAGGTGGGAGGATTGTTTaGGGGAAGCTGAGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRGGRIV*GKLSLQ
Trigger: CTGCAAACTCAGCTTCCCTCAAACAATCCTCCCACC...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTAACTGGAGAAATGCTTaGAAAAGTAATCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSNWRNA*KSNLRL
Trigger: CAACCTGAGATTACTTTTTCAAGCATTTCTCCAGTT...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGATGCCTCACCTTGACCTaGAGTGAAGAGCACTCACCA +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRCLTLT*SEEHSP
Trigger: TGGTGAGTGCTCTTCACTTCAGGTCAAGGTGAGGCA...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAAATCATGTGGTGCGTaGAAGGAAGAGCAATGTTAT +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAKSCGA*KEEQCY
Trigger: ATAACATTGCTCTTCCTTTCACGCACCACATGATTT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCTCCTGTCTCCGAAGTTaGATCGAATCAATTAAATCG +
Preference number: 4 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLISCLRS*IESIKS
Trigger: CGATTTAATTGATTCGATGCAACTTCGGAGACAGGA...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTATCCTGTCTCCGAAGTTaGATCGAATCAATTAAATCG +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVSCLRS*IESIKS
Trigger: CGATTTAATTGATTCGATGCAACTTCGGAGACAGGA...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR GCA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTACAGCATCACATGCTaGAGAGAAATCTTTCATGAA +
Preference number: 4 (lower is better)
Translates to: GRKCSTQCGRMELATCSFYSITC*REIFHE
Trigger: TTCATGAAAGATTTCTCTGCAGCATGTGATGCTGTA...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCATATGACTTCTCTGCCTaGTCATTAGAGGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAYDFSA*SLEEEK
Trigger: CTTTTCTTCCTCTAATGAGCAGGCAGAGAAGTCATA...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATGCATATTCCTGCCTCTaGCTACCCTGTTCTAATTTG +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDAYSCL*LPCSNL
Trigger: CAAATTAGAACAGGGTAGGCAGAGGCAGGAATATGC...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCTCAAAGCTCAAAGTaGAAGTCTAGGTATATTCTC +
Preference number: 4 (lower is better)
Translates to: KGRKCSTQCGRMELATCSSQSSK*KSRYIL
Trigger: GAGAATATACCTAGACTTGCACTTTGAGCTTTGAGA...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATACACATATACCACACTaGCTTCATTTTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNTHIPH*LHFLQL
Trigger: CAGCTGGAGAAAATGAAGGCAGTGTGGTATATGTGT...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCATAATGTCCTTATTTaGACACATATACCACACTGC +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVHNVLI*THIPHC
Trigger: GCAGTGTGGTATATGTGTGCAAATAAGGACATTATG...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATCTTTCCCCCATAGTCTaGCTTAGTCTCTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDLSPIV*LSLFVS
Trigger: GGAAACAAAGAGACTAAGCCAGACTATGGGGGAAAG...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTCTTCTCCTTCTCTaGTTTCTCAAGCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVFLLLL*FLKLFM
Trigger: CATGAAAAGCTTGAGAAACCAGAGAAGGAGAAGAAA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTTCTTTGATTCGGGACTaGAAAGTATCGATCAGATCA +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAASLIRD*KVSIRS
Trigger: TGATCTGATCGATACTTTCCAGTCCCGAATCAAAGA...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATTTTCTCTGGCTTTTGTaGCCAATATTACTGGACTCC +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNFLWLL*PILLDS
Trigger: GGAGTCCAGTAATATTGGCCACAAAAGCCAGAGAAA...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTATCCACTTTATTATGGTaGTCTGGAACTGATCCTGTA +
Preference number: 4 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVSTLLW*SGTDPV
Trigger: TACAGGATCAGTTCCAGACCACCATAATAAAGTGGA...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAGAGATTACGCATTTGTaGTCTCAAGTTAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPEITHL*SQVRKL
Trigger: CAGTTTCCTAACTTGAGACCACAAATGCGTAATCTC...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 72 bp GCCTCACTTCAAAGCTTCAACCAACAGGCTTACTCCTaGTTAGAAGTTAACGCAGCTGGTGATTTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: ASLQSFNQQAYS*LEVNAAGDFKL
Trigger: CAACTTAAAATCACCAGCTGCGTTAACTTCTAACAAGGAGTAAGCCTGTTGGTTGAAGCTTTGAAGTGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATAATGTGTGTATGTTCTaGTTGCTCCAACAACCAACC +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDNVCMF*LLQQPT
Trigger: GGTTGGTTGTTGGAGCAATCAGAACATACACACATT...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGACTGGAAGGAAAGCACTaGCATTTAAGCTCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRLEGKH*HLSSVR
Trigger: CCGCACAGAGCTTAAATGTCAGTGCTTTCCTTCCAG...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATAAGTTCTCCAGGGACTaGTTTTTGTCCTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDKFSRD*FLSSLQ
Trigger: TTGCAAAGAGGACAAAAAGCAGTCCCTGGAGAACTT...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAGAAAAGAAGCCTTGTaGATCCATAAAAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAARKEAL*IHKSAK
Trigger: CTTTGCACTTTTATGGATGCACAAGGCTTCTTTTCT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATTGTGTATGTTCTGATTaGTCCAACAACCAACCTTTC +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNCVCSD*SNNQPF
Trigger: GAAAGGTTGGTTGTTGGAGCAATCAGAACATACACA...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATCTTAAAGTCCAGTCCTaGCGATTTCTGAATCTCACT +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDLKVQS*RFLNLT
Trigger: AGTGAGATTCAGAAATCGCCAGGACTGGACTTTAAG...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCTTTCTTCTCCTTCTCTaGTTTCTCAAGCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIFLLLL*FLKLFM
Trigger: CATGAAAAGCTTGAGAAACCAGAGAAGGAGAAGAAA...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATAGTCACCCAAGAACTTaGATAGAGATATACAAGGAG +
Preference number: 4 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNSHPRT*IEIYKE
Trigger: CTCCTTGTATATCTCTATCCAAGTTCTTGGGTGACT...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCATGTCTATGGACAGCATaGTTTACTGGACATTTTAAG +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLACLWTA*FTGHFK
Trigger: CTTAAAATGTCCAGTAAACCATGCTGTCCATAGACA...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTGGTAAGAAACGTTTaGGAAGAAATGCTTTTATGG +
Preference number: 4 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVLVRNV*EEMLLW
Trigger: CCATAAAAGCATTTCTTCCCAAACGTTTCTTACCAA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTACTGGGTTGATCAAATaGTTCTTTCTTTGCACATAT +
Preference number: 4 (lower is better)
Translates to: EKGRKCSTQCGRMELATCTGLIK*FFLCTY
Trigger: ATATGTGCAAAGAAAGAACCATTTGATCAACCCAGT...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCATGTCAGCATCTTTCATaGACATCCAGACAATTTCTT +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPCQHLS*TSRQFL
Trigger: AAGAAATTGTCTGGATGTCCATGAAAGATGCTGACA...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 72 bp GTATACTTATTGCAGAGGAGAAAAGCCAAAGAACGTTaGCCCATGGGCAGTCTTAGCTATTTAAAATCACCC +
Preference number: 4 (lower is better)
Translates to: VYLLQRRKAKER*PMGSLSYLKSP
Trigger: GGGTGATTTTAAATAGCTAAGACTGCCCATGGGCAAACGTTCTTTGGCTTTTCTCCTCTGCAATAAGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAGTACTACTGGTAAAATaGTATCATACAGCATCACAT +
Preference number: 4 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPVLLVK*YHTASH
Trigger: ATGTGATGCTGTATGATAGCATTTTACCAGTAGTAC...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGAGGTACTCACAATCCTTaGCAACCTGATGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRGTHNP*QPDVLG
Trigger: TCCAAGGACATCAGGTTGGCAAGGATTGTGAGTACC...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGAAAGCCAAAGAACGTTTaGCCATGGGCAGTCTTAGCT +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRKPKNV*PWAVLA
Trigger: AGCTAAGACTGCCCATGGGCAAACGTTCTTTGGCTT...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATGGAAGGTATACTTATTaGAGAGGAGAAAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDGRYTY*RGEKPK
Trigger: CTTTGGCTTTTCTCCTCTGCAATAAGTATACCTTCC...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCTCTTGGATATCTTTTTaGATTATAGATAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLISWISF*IIDSLG
Trigger: CCCAAGGCTATCTATAATGCAAAAAGATATCCAAGA...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGATCGCTGATGAGACGCTaGTCTACCAAGTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRSLMRR*STKSSS
Trigger: TGATGAAGACTTGGTAGACCAGCGTCTCATCAGCGA...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGACACCATGGACCACATTaGGGAAGGATACCAGGATTT +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRHHGPH*GRIPGF
Trigger: AAATCCTGGTATCCTTCCCCAATGTGGTCCATGGTG...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGAAGCCTACTAGAACTCTaGAAGTATCGCCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRSLLEL*KYRLWL
Trigger: CAGCCAAAGGCGATACTTCCAGAGTTCTAGTAGGCT...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGAGGCCCAAGACTTCATTaGAGGAAGCTCTGCTATAGA +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRGPRLH*RKLCYR
Trigger: TCTATAGCAGAGCTTCCTCCAATGAAGTCTTGGGCC...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAATTATTGTTAGAGGATaGTGCCATCATGATGCTAAA +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAIIVRG*CHHDAK
Trigger: TTTAGCATCATGATGGCACCATCCTCTAACAATAAT...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCATACCCTGTTCTAATTTaGCACTCTAAAGATAGTTCA +
Preference number: 4 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAYPVLI*HSKDSS
Trigger: TGAACTATCTTTAGAGTGCCAAATTAGAACAGGGTA...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 72 bp ATTGACCATGTTAATGGTGGAGCCAATATGAAGTACTaGCTAAATCATGTGGTGCGTGAAAGGAAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: IDHVNGGANMKY*LNHVVRERKSN
Trigger: ATTGCTCTTCCTTTCACGCACCACATGATTTAGCAAGTACTTCATATTGGCTCCACCATTAACATGGTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGATTTTATTGGCAACTTTaGGCTATGCTTCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRFYWQL*AMLHPG
Trigger: GCCAGGATGAAGCATAGCCCAAAGTTGCCAATAAAA...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGATTATATTACAGAAAATaGGACCAGCTGGGTTGCACC +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRLYYRK*DQLGCT
Trigger: GGTGCAACCCAGCTGGTCCCATTTTCTGTAATATAA...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 72 bp AGATTAATATTTTCGTGCCTGCTAACACAATACCTATaGTGCAGCACAGGAATCAAGGAGTCATTTGCACTT +
Preference number: 4 (lower is better)
Translates to: RLIFSCLLTQYL*CSTGIKESFAL
Trigger: AAGTGCAAATGACTCCTTGATTCCTGTGCTGCACAATAGGTATTGTGTTAGCAGGCACGAAAATATTAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 72 bp TATACTACCAGAAGACAGAGATTCAGGTTAGCTAGTTaGCTAATCCTCACAGTTTCAGAGATATGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: YTTRRQRFRLAS*LILTVSEICLV
Trigger: TACAAGGCATATCTCTGAAACTGTGAGGATTAGCAAACTAGCTAACCTGAATCTCTGTCTTCTGGTAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 72 bp TGTATTAAGAACTGGGTTGATCAAATGGTTCTTTCTTaGCACATATCAAGGCTTTCGACTATTCCCAACCAG +
Preference number: 4 (lower is better)
Translates to: CIKNWVDQMVLS*HISRLSTIPNQ
Trigger: CTGGTTGGGAATAGTCGAAAGCCTTGATATGTGCAAAGAAAGAACCATTTGATCAACCCAGTTCTTAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 72 bp TGTTATCAGCCAGTCTTACTTAATGTATTAGGCCAGTaGGAAACCATCATTAAAGAAACTGACCCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: CYQPVLLNVLGQ*ETIIKETDPGD
Trigger: ATCACCAGGGTCAGTTTCTTTAATGATGGTTTCCAACTGGCCTAATACATTAAGTAAGACTGGCTGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGACAGGCTTCTAGAAGTTaGGAAAGTATGAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRQASRS*ESMSFI
Trigger: AATGAAGCTCATACTTTCTCAACTTCTAGAAGCCTG...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
3UTR CAA 72 bp TCCTTGTTAGAAGTTAACGCAGCTGGTGATTTTAAGTaGAAATCAATGCTCATTTACCATTTCCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: SLLEVNAAGDFK*KSMLIYHFPKS
Trigger: GGATTTGGGGAAATGGTAAATGAGCATTGATTTCAACTTAAAATCACCAGCTGCGTTAACTTCTAACAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR TCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGATCAACTGTAGTCATCTaGGAGCCAGAATTATTATTG +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRSTVVI*EPELLL
Trigger: CAATAATAATTCTGGCTCTCAGATGACTACAGTTGA...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR GCA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGATATATTGGAAGAAGATaGCATCTCAGACTTACGTAT +
Preference number: 4 (lower is better)
Translates to: FINKAATGFERIGSNFKRYIGRR*HLRLTY
Trigger: ATACGTAAGTCTGAGATGGCATCTTCTTCCAATATA...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS TCA 90 bp AGCCCCTGGCTGCTGGTCTTTGCTCAGGTCTCACGGCGGCCCCATTaGTGTCCGAGCGGGCTGGCGGCTCTGTTGGGCGAGCTAGTCTCA +
Preference number: 5 (lower is better)
Translates to: SPWLLVFAQVSRRPH*CPSGLAALLGELVS
Trigger: TGAGACTAGCTCGCCCAACAGAGCCGCCAGCCCGCTCGGACATCAATGGGGCCGCCGTGAGACCTGAGCAAAGACCAGCAGCCAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS GCA 90 bp CTGGCACCACATTTGGGTCTCGGTGGCCATGTTCCCGCCTGTCCATaGGGTTGTCCCGGAAACGGCCTGGGCCAGCAGCCCTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LAPHLGLGGHVPACP*GCPGNGLGQQPLCW
Trigger: CCAGCACAAGGGCTGCTGGCCCAGGCCGTTTCCGGGACAACCGCATGGACAGGCGGGAACATGGCCACCGAGACCCAAATGTGGTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS GCA 90 bp TCATCTCTGATCATCTCACGCGGAGAGCCCCTGGCTGCTGGTCTTTaGTCAGGTCTCACGGCGGCCCCATTGATGTCCGAGCGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SSLIISRGEPLAAGL*SGLTAAPLMSERAG
Trigger: GCCAGCCCGCTCGGACATCAATGGGGCCGCCGTGAGACCTGAGCAAAGACCAGCAGCCAGGGGCTCTCCGCGTGAGATGATCAGAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS GCA 90 bp GTGGTTGTAGGGGGCCTGTGGGAGGGTGAGGGGGTCCAGGGCCTCTaGGTGGTGGGAAAGGCAGTGGTGGTCATAGGTCTTGCAGCAACT +
Preference number: 5 (lower is better)
Translates to: VVVGGLWEGEGVQGL*VVGKAVVVIGLAAT
Trigger: AGTTGCTGCAAGACCTATGACCACCACTGCCTTTCCCACCACGCAGAGGCCCTGGACCCCCTCACCCTCCCACAGGCCCCCTACAACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 90 bp TCCTTTGCTGGCTTGGGAGGACCTGGCACCACATTTGGGTCTCGGTaGCCATGTTCCCGCCTGTCCATGCGGTTGTCCCGGAAACGGCCT +
Preference number: 5 (lower is better)
Translates to: SFAGLGGPGTTFGSR*PCSRLSMRLSRKRP
Trigger: AGGCCGTTTCCGGGACAACCGCATGGACAGGCGGGAACATGGCCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 90 bp GGGAGGTTTCTCCTTTGCTGGCTTGGGAGGACCTGGCACCACATTTaGGTCTCGGTGGCCATGTTCCCGCCTGTCCATGCGGTTGTCCCG +
Preference number: 5 (lower is better)
Translates to: GRFLLCWLGRTWHHI*VSVAMFPPVHAVVP
Trigger: CGGGACAACCGCATGGACAGGCGGGAACATGGCCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GGCAGGGCAAGGACAGGCACCCAGTTTTCCCAAGTCCAGTGGCCTTTTCATGATCTCACGGCGGCCCCATaGATGTCCGAGCGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: GRARTGTQFSQVQWPFHDLTAAP*MSERAG
Trigger: GCCAGCCCGCTCGGACATCAATGGGGCCGCCGTGAG...ATCATGAAAAGGCCACTGGACTTGGGAAAACTGGGTGCCTGTCCTTGCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS TCA 90 bp GTTGTCCCGGAAACGGCCTGGGCCAGCAGCCCTTGTGCTGGGTTCTaGGATGGTGGTGGGAGGGGCATTTGTGAAGCTCTCCAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: VVPETAWASSPCAGF*DGGGRGICEALQAG
Trigger: ACCAGCTTGGAGAGCTTCACAAATGCCCCTCCCACCACCATCTCAGAACCCAGCACAAGGGCTGCTGGCCCAGGCCGTTTCCGGGACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS GCA 90 bp TTCCGCGAGACCTCCCAGTGTGCCTCAGAAACCGAGCTGGCCTACTaGTGTCCGGAGAAACCAAAGGCACTTTCCGTCCTCCGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: FRETSQCASETELAY*CPEKPKALSVLRGC
Trigger: GCAGCCACGGAGGACGGAAAGTGCCTTTGGTTTCTCCGGACAGCAGTAGGCCAGCTCGGTTTCTGAGGCACACTGGGAGGTCTCGCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS GCA 90 bp CCAGGGCCTCTGCGTGGTGGGAAAGGCAGTGGTGGTCATAGGTCTTaGAGCAACTGTTACCGCCCGGGACGTGGACCGAGTCACTGTTGT +
Preference number: 5 (lower is better)
Translates to: PGPLRGGKGSGGHRS*SNCYRPGRGPSHCC
Trigger: ACAACAGTGACTCGGTCCACGTCCCGGGCGGTAACAGTTGCTGCAAGACCTATGACCACCACTGCCTTTCCCACCACGCAGAGGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS GCA 90 bp CTGGCCCTCGCTGGTGATCCTTCTCACCTTGCCTCCTTCCTCACCTaGCTGGTGGAAGAGCACAATCTGTTGGATGTGCCTCTCCGCCAG +
Preference number: 5 (lower is better)
Translates to: LALAGDPSHLASFLT*LVEEHNLLDVPLRQ
Trigger: CTGGCGGAGAGGCACATCCAACAGATTGTGCTCTTCCACCAGGCAGGTGAGGAAGGAGGCAAGGTGAGAAGGATCACCAGCGAGGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 90 bp ATCAGCTTAGGGATGAGGCTAGGGTCCAGGGGCTGCTCCAGGATCTaGCCCTCGCTGGTGATCCTTCTCACCTTGCCTCCTTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: ISLGMRLGSRGCSRI*PSLVILLTLPPSSP
Trigger: AGGTGAGGAAGGAGGCAAGGTGAGAAGGATCACCAGCGAGGGCCAGATCCTGGAGCAGCCCCTGGACCCTAGCCTCATCCCTAAGCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS GCA 90 bp TTCAGGAAGCTCATCAGCTTAGGGATGAGGCTAGGGTCCAGGGGCTaGTCCAGGATCTGGCCCTCGCTGGTGATCCTTCTCACCTTGCCT +
Preference number: 5 (lower is better)
Translates to: FRKLISLGMRLGSRG*SRIWPSLVILLTLP
Trigger: AGGCAAGGTGAGAAGGATCACCAGCGAGGGCCAGATCCTGGAGCAGCCCCTGGACCCTAGCCTCATCCCTAAGCTGATGAGCTTCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 90 bp GGCCTACTGCTGTCCGGAGAAACCAAAGGCACTTTCCGTCCTCCGTaGCTGCCTCTAATAGTGGCATGGGGGTGGGGTTCTGATCCACAC +
Preference number: 5 (lower is better)
Translates to: GLLLSGETKGTFRPP*LPLIVAWGWGSDPH
Trigger: GTGTGGATCAGAACCCCACCCCCATGCCACTATTAGAGGCAGCCACGGAGGACGGAAAGTGCCTTTGGTTTCTCCGGACAGCAGTAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 90 bp CCCTCCGCCACCACCTGGCCCTCTACACCAGAGGCCTTACATTTCTaGACAAAGCCCTTCTGCCTGATCTTCTCGATCCTACGGATGGGG +
Preference number: 5 (lower is better)
Translates to: PSATTWPSTPEALHF*TKPFCLIFSILRMG
Trigger: CCCCATCCGTAGGATCGAGAAGATCAGGCAGAAGGGCTTTGTCCAGAAATGTAAGGCCTCTGGTGTAGAGGGCCAGGTGGTGGCGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS GCA 90 bp CCTCCTTCCTCACCTGCCTGGTGGAAGAGCACAATCTGTTGGATGTaGCTCTCCGCCAGCTCACAGTACACATCGTCCTTCAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PPSSPAWWKSTICWM*LSASSQYTSSFSRL
Trigger: GAGCCTGCTGAAGGACGATGTGTACTGTGAGCTGGCGGAGAGGCACATCCAACAGATTGTGCTCTTCCACCAGGCAGGTGAGGAAGGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 90 bp GGCACTTTCCGTCCTCCGTGGCTGCCTCTAATAGTGGCATGGGGGTaGGGTTCTGATCCACACACTAGCCACATGGCCAACAGCATAGTG +
Preference number: 5 (lower is better)
Translates to: GTFRPPWLPLIVAWG*GSDPHTSHMANSIV
Trigger: CACTATGCTGTTGGCCATGTGGCTAGTGTGTGGATCAGAACCCCACCCCCATGCCACTATTAGAGGCAGCCACGGAGGACGGAAAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 90 bp ACCAAAGGCACTTTCCGTCCTCCGTGGCTGCCTCTAATAGTGGCATaGGGGTGGGGTTCTGATCCACACACTAGCCACATGGCCAACAGC +
Preference number: 5 (lower is better)
Translates to: TKGTFRPPWLPLIVA*GWGSDPHTSHMANS
Trigger: GCTGTTGGCCATGTGGCTAGTGTGTGGATCAGAACCCCACCCCCATGCCACTATTAGAGGCAGCCACGGAGGACGGAAAGTGCCTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 90 bp TCTCTCAATTCCGCGAGACCTCCCAGTGTGCCTCAGAAACCGAGCTaGCCTACTGCTGTCCGGAGAAACCAAAGGCACTTTCCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLNSARPPSVPQKPS*PTAVRRNQRHFPSS
Trigger: GGAGGACGGAAAGTGCCTTTGGTTTCTCCGGACAGCAGTAGGCCAGCTCGGTTTCTGAGGCACACTGGGAGGTCTCGCGGAATTGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 90 bp GGCCTTCTTTTTGGGAGGTTTCTCCTTTGCTGGCTTGGGAGGACCTaGCACCACATTTGGGTCTCGGTGGCCATGTTCCCGCCTGTCCAT +
Preference number: 5 (lower is better)
Translates to: GLLFGRFLLCWLGRT*HHIWVSVAMFPPVH
Trigger: ATGGACAGGCGGGAACATGGCCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCAAAAAGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTCTCACGGCGGCCCCATaGATGTCCGAGCGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: KGRKCSTQCGRMELATCSLTAAP*MSERAG
Trigger: GCCAGCCCGCTCGGACATCAATGGGGCCGCCGTGAG...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACCTGGCTGCTGGTCTTaGCTCAGGTCTCACGGCGGC +
Preference number: 5 (lower is better)
Translates to: TQCGRMELATCSFSSCRGPGCWS*LRSHGG
Trigger: GCCGCCGTGAGACCTGAGCAAAGACCAGCAGCCAGG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 90 bp AAGGGAAACGCAACATTCTTGACCGAGCTGAGGACCCCTCATCTCTaGTCATCTCACGCGGAGAGCCCCTGGCTGCTGGTCTTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: KGNATFLTELRTPHL*SSHAESPWLLVFAQ
Trigger: CTGAGCAAAGACCAGCAGCCAGGGGCTCTCCGCGTGAGATGATCAGAGATGAGGGGTCCTCAGCTCGGTCAAGAATGTTGCGTTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS GCA 90 bp GGTTCCTCCAGAGTGGATCTCTCAATTCCGCGAGACCTCCCAGTGTaGCTCAGAAACCGAGCTGGCCTACTGCTGTCCGGAGAAACCAAA +
Preference number: 5 (lower is better)
Translates to: GSSRVDLSIPRDLPV*LRNRAGLLLSGETK
Trigger: TTTGGTTTCTCCGGACAGCAGTAGGCCAGCTCGGTTTCTGAGGCACACTGGGAGGTCTCGCGGAATTGAGAGATCCACTCTGGAGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS TCA 90 bp CGAGCTAGTCTCAACACGGGCACACTCCTCCTTCTCTGGAGAGGCTaGAGGTTTGGTTCCTCCAGAGTGGATCTCTCAATTCCGCGAGAC +
Preference number: 5 (lower is better)
Translates to: RASLNTGTLLLLWRG*RFGSSRVDLSIPRD
Trigger: GTCTCGCGGAATTGAGAGATCCACTCTGGAGGAACCAAACCTTCAGCCTCTCCAGAGAAGGAGGAGTGTGCCCGTGTTGAGACTAGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS GCA 90 bp CCCTCTCTCTCTTTACCGAGGGTGAGCAATACAAAAGGGGTGTGCTaGAGCTCCAGCTTTCAGAGTACCGCCACAGATCCACAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PSLSLPRVSNTKGVC*SSSFQSTATDPQPV
Trigger: GACAGGCTGTGGATCTGTGGCGGTACTCTGAAAGCTGGAGCTGCAGCACACCCCTTTTGTATTGCTCACCCTCGGTAAAGAGAGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS GCA 90 bp TGGCCCTCTACACCAGAGGCCTTACATTTCTGGACAAAGCCCTTCTaGCTGATCTTCTCGATCCTACGGATGGGGCCTTGGTCGATGACC +
Preference number: 5 (lower is better)
Translates to: WPSTPEALHFWTKPF*LIFSILRMGPWSMT
Trigger: GGTCATCGACCAAGGCCCCATCCGTAGGATCGAGAAGATCAGGCAGAAGGGCTTTGTCCAGAAATGTAAGGCCTCTGGTGTAGAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 90 bp CACTCCTCCTTCTCTGGAGAGGCTGAAGGTTTGGTTCCTCCAGAGTaGATCTCTCAATTCCGCGAGACCTCCCAGTGTGCCTCAGAAACC +
Preference number: 5 (lower is better)
Translates to: HSSFSGEAEGLVPPE*ISQFRETSQCASET
Trigger: GGTTTCTGAGGCACACTGGGAGGTCTCGCGGAATTGAGAGATCCACTCTGGAGGAACCAAACCTTCAGCCTCTCCAGAGAAGGAGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 90 bp TCTCAACACGGGCACACTCCTCCTTCTCTGGAGAGGCTGAAGGTTTaGTTCCTCCAGAGTGGATCTCTCAATTCCGCGAGACCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: SQHGHTPPSLERLKV*FLQSGSLNSARPPS
Trigger: ACTGGGAGGTCTCGCGGAATTGAGAGATCCACTCTGGAGGAACCAAACCTTCAGCCTCTCCAGAGAAGGAGGAGTGTGCCCGTGTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 90 bp TTTTGTCCTGGGCCTTCTTTTTGGGAGGTTTCTCCTTTGCTGGCTTaGGAGGACCTGGCACCACATTTGGGTCTCGGTGGCCATGTTCCC +
Preference number: 5 (lower is better)
Translates to: FCPGPSFWEVSPLLA*EDLAPHLGLGGHVP
Trigger: GGGAACATGGCCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCAAAAAGAAGGCCCAGGACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCCGCCTGTCCATGCGGTaGTCCCGGAAACGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIRLSMR*SRKRPG
Trigger: CCCAGGCCGTTTCCGGGACAACCGCATGGACAGGCG...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCACGCCTGTCCATGCGGTaGTCCCGGAAACGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLARLSMR*SRKRPG
Trigger: CCCAGGCCGTTTCCGGGACAACCGCATGGACAGGCG...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 90 bp GCTCCCAAAATTGCACGCCTGACCACTGAGGGCAGAGAGCTGCTGTaGATAGGCCCAGTCTTCATCGTTAGGAGCAGAGATCACCAGCAA +
Preference number: 5 (lower is better)
Translates to: APKIARLTTEGRELL*IGPVFIVRSRDHQQ
Trigger: TTGCTGGTGATCTCTGCTCCTAACGATGAAGACTGGGCCTATTCACAGCAGCTCTCTGCCCTCAGTGGTCAGGCGTGCAATTTTGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461431.1
CDS CCA 90 bp ATACTCTGTTCTTCCCTGCAAAGCTGGCAAGGATGTTGGGAGAGCTaGACCCCGAAGGGAAACGCAACATTCTTGACCGAGCTGAGGACC +
Preference number: 5 (lower is better)
Translates to: ILCSSLQSWQGCWES*TPKGNATFLTELRT
Trigger: GGTCCTCAGCTCGGTCAAGAATGTTGCGTTTCCCTTCGGGGTCCAGCTCTCCCAACATCCTTGCCAGCTTTGCAGGGAAGAACAGAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 90 bp ACAAAGCCCTTCTGCCTGATCTTCTCGATCCTACGGATGGGGCCTTaGTCGATGACCTCGTACATGGCTTCCAGCCTAACGGGATATGGA +
Preference number: 5 (lower is better)
Translates to: TKPFCLIFSILRMGP*SMTSYMASSLTGYG
Trigger: TCCATATCCCGTTAGGCTGGAAGCCATGTACGAGGTCATCGACCAAGGCCCCATCCGTAGGATCGAGAAGATCAGGCAGAAGGGCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTGGGCTGGCGGCTCTGTaGGGCGAGCTAGTCTCAACA +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVGLAAL*GELVST
Trigger: TGTTGAGACTAGCTCGCCCAACAGAGCCGCCAGCCC...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCACCTGGCTGCTGGTCTTaGCTCAGGTCTCACGGCGGC +
Preference number: 5 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPPGCWS*LRSHGG
Trigger: GCCGCCGTGAGACCTGAGCAAAGACCAGCAGCCAGG...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAGCGACCCGCTCACCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAASDPLT*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGTGAGCGGGTCGCT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTATGGGACCAGCTGGGTaGCACCCACTCCCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: KGRKCSTQCGRMELATCSMGPAG*HPLPCV
Trigger: GACACAGGGGAGTGGGTGCAACCCAGCTGGTCCCAT...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS TCA 90 bp GTTTCTCCTCGGTCTCGTGTGTCTGTGTGTGCCAGTCCCTTGTGCTaGCACAGGACGTCCCTTAAAGTCCAGTCCTGGCGATTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: VSPRSRVSVCASPLC*HRTSLKVQSWRFLN
Trigger: ATTCAGAAATCGCCAGGACTGGACTTTAAGGGACGTCCTGTGTCAGCACAAGGGACTGGCACACACAGACACACGAGACCGAGGAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000469554.1
ENST00000475181.1
CDS TCA 90 bp CAGACCAAAATTGCACGCCTGACCACTGAGGGCAGAGAGCTGCTGTaGATAGGCCCAGTCTTCATCGTTAGGAGCAGAGATCACCAGCAA +
Preference number: 5 (lower is better)
Translates to: QTKIARLTTEGRELL*IGPVFIVRSRDHQQ
Trigger: TTGCTGGTGATCTCTGCTCCTAACGATGAAGACTGGGCCTATTCACAGCAGCTCTCTGCCCTCAGTGGTCAGGCGTGCAATTTTGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000479368.1
CDS GCA 90 bp ACTAAGAATTTTGTCCTGGGCCTTCTTTTTGGGAGGTTTCTCCTTTaGTGGCTTGGGAGGACCTGGCACCACATTTGGGTCTCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: TKNFVLGLLFGRFLL*WLGRTWHHIWVSVA
Trigger: GGCCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCAAAAAGAAGGCCCAGGACAAAATTCTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 90 bp AAGAATTTTGTCCTGGGCCTTCTTTTTGGGAGGTTTCTCCTTTGCTaGCTTGGGAGGACCTGGCACCACATTTGGGTCTCGGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: KNFVLGLLFGRFLLC*LGRTWHHIWVSVAM
Trigger: CATGGCCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCAAAAAGAAGGCCCAGGACAAAATTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCGGGCTGGCGGCTCTGTaGGGCGAGCTAGTCTCAACA +
Preference number: 5 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIGLAAL*GELVST
Trigger: TGTTGAGACTAGCTCGCCCAACAGAGCCGCCAGCCC...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAAGCACCATGCCAAACTaGCCCTTCTCCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TQCGRMELATCSFSSCRGSTMPN*PFSSFR
Trigger: CCTGAAGCTGGAGAAGGGCAAGTTTGGCATGGTGCT...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTGGACCGAGTCACTGTaGTGGCTGGGGCAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVWTESL*WLGQEE
Trigger: TTCCTCCTGCCCCAGCCACAACAGTGACTCGGTCCA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTCGGCCACTGACTTCTaGGGACTCTGCGTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAESATDF*GLCVKC
Trigger: ACACTTCACGCAGAGTCCCAAGAAGTCAGTGGCCGA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 90 bp CAAAGGACCCCAGCAGGTCGGCCACTGACTTCTTGGGACTCTGCGTaGAGTGTTTGTTGGTGGGTTTCTGATAGCCATCCTGTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: QRTPAGRPLTSWDSA*SVCWWVSDSHPVLF
Trigger: AAACAGAACAGGATGGCTATCAGAAACCCACCAACAAACACTTCACGCAGAGTCCCAAGAAGTCAGTGGCCGACCTGCTGGGGTCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 90 bp GTAACCATAGCCTGCATACTCATCTTCTGGGCAGCGCATCCCCAGTaGCTGCTGAATCGCCATTTCCTGTCTCCGAAGTTGCATCGAATC +
Preference number: 5 (lower is better)
Translates to: VTIACILIFWAAHPQ*LLNRHFLSPKLHRI
Trigger: GATTCGATGCAACTTCGGAGACAGGAAATGGCGATTCAGCAGTCACTGGGGATGCGCTGCCCAGAAGATGAGTATGCAGGCTATGGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000479368.1
CDS-3UTR CAA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCATCTGGCTTAGTCTCTTaGTTTCCGGGCGTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPSGLVS*FPGVKA
Trigger: TGCTTTTACGCCCGGAAACAAAGAGACTAAGCCAGA...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTCCTACGGATGGGGCCTaGGTCGATGACCTCGTACAT +
Preference number: 5 (lower is better)
Translates to: EKGRKCSTQCGRMELATCPTDGA*VDDLVH
Trigger: ATGTACGAGGTCATCGACCAAGGCCCCATCCGTAGG...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTGGGAGGTTTCTCCTTaGCTGGCTTGGGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVWEVSP*LAWEDL
Trigger: CAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAGTGACAGCTGGCCCTTaGCCCCTCATCACCAAATCT +
Preference number: 5 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPVTAGP*PLITKS
Trigger: AGATTTGGTGATGAGGGGCAAAGGGCCAGCTGTCAC...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAGAGGTGATGACCTCATaGAGTCTCAGCCACAGCAGG +
Preference number: 5 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPEVMTS*SLSHSR
Trigger: CCTGCTGTGGCTGAGACTCAATGAGGTCATCACCTC...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS TCA 90 bp TCCAGCTTTCAGAGTACCGCCACAGATCCACAGCCTGTCCTGATCTaGGAGCTGAGCCGATGCCTTTTCTTTCTGGCTGTGTCTTTTTAC +
Preference number: 5 (lower is better)
Translates to: SSFQSTATDPQPVLI*ELSRCLFFLAVSFY
Trigger: GTAAAAAGACACAGCCAGAAAGAAAAGGCATCGGCTCAGCTCTCAGATCAGGACAGGCTGTGGATCTGTGGCGGTACTCTGAAAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000469554.1
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTGGAGAGGCTGAAGGTTaGGTTCCTCCAGAGTGGATC +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVGEAEG*VPPEWI
Trigger: GATCCACTCTGGAGGAACCAAACCTTCAGCCTCTCC...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTGGAAACGCAACATTCTaGACCGAGCTGAGGACCCCT +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVGNATF*TELRTP
Trigger: AGGGGTCCTCAGCTCGGTCAAGAATGTTGCGTTTCC...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTGAAGAGCACAATCTGTaGGATGTGCCTCTCCGCCAG +
Preference number: 5 (lower is better)
Translates to: KGRKCSTQCGRMELATCSEEHNL*DVPLRQ
Trigger: CTGGCGGAGAGGCACATCCAACAGATTGTGCTCTTC...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTACCTACGGATGGGGCCTaGGTCGATGACCTCGTACAT +
Preference number: 5 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVPTDGA*VDDLVH
Trigger: ATGTACGAGGTCATCGACCAAGGCCCCATCCGTAGG...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTATCTGGTTGGTGGGACTaGTGCTCTCCTTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVSGWWD*CSPWVL
Trigger: GAGGACCCAAGGAGAGCACAAGTCCCACCAACCAGA...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCATGGGAGGTTTCTCCTTaGCTGGCTTGGGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPWEVSP*LAWEDL
Trigger: CAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCA...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCATGTTGCACATACATATaGTTCTCAGCCTTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPCCTYI*FSALGA
Trigger: TGCTCCCAAGGCTGAGAACAATATGTATGTGCAACA...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCATTCATGGTGCTGTTGTaGACAGGGCCGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPFMVLL*TGPKMV
Trigger: CACCATCTTCGGCCCTGTCAACAACAGCACCATGAA...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTCACCATGGACCACATaGGGGAAGGATACCAGGATT +
Preference number: 5 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAESPWTT*GKDTRI
Trigger: AATCCTGGTATCCTTCCCCAATGTGGTCCATGGTGA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGGAAACGCAACATTCTaGACCGAGCTGAGGACCCCT +
Preference number: 5 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAGNATF*TELRTP
Trigger: AGGGGTCCTCAGCTCGGTCAAGAATGTTGCGTTTCC...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGAAGAGCACAATCTGTaGGATGTGCCTCTCCGCCAG +
Preference number: 5 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVEEHNL*DVPLRQ
Trigger: CTGGCGGAGAGGCACATCCAACAGATTGTGCTCTTC...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAAGCACCATGCCAAACTaGCCCTTCTCCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVSTMPN*PFSSFR
Trigger: CCTGAAGCTGGAGAAGGGCAAGTTTGGCATGGTGCT...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATTCTGGTTGGTGGGACTaGTGCTCTCCTTGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNSGWWD*CSPWVL
Trigger: GAGGACCCAAGGAGAGCACAAGTCCCACCAACCAGA...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTTCGGCCACTGACTTCTaGGGACTCTGCGTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAASATDF*GLCVKC
Trigger: ACACTTCACGCAGAGTCCCAAGAAGTCAGTGGCCGA...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTAGAAGGAGTCTTCGTTaGCCTTCAAAGGACCCCAGC +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVRRSLR*PSKDPS
Trigger: GCTGGGGTCCTTTGAAGGCAAACGAAGACTCCTTCT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGACCATCCTGGTATCCTaGGTGGTAACTATGGTAACC +
Preference number: 5 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAETILVS*VVTMVT
Trigger: GGTTACCATAGTTACCACCAAGGATACCAGGATGGT...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCACTAACACAATACCTATaGTGCAGCACAGGAATCAAG +
Preference number: 5 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPLTQYL*CSTGIK
Trigger: CTTGATTCCTGTGCTGCACAATAGGTATTGTGTTAG...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGCCATTCTCCATGTCATaGTGTAATCCAATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAEPFSMS*CNPMVA
Trigger: AGCCACCATTGGATTACACAATGACATGGAGAATGG...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTGGACTTGTGCTCTCCTaGGGTCCTCTTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: KGRKCSTQCGRMELATCSGLVLS*GPLSSS
Trigger: AGAAGAAGAAAGAGGACCCAAGGAGAGCACAAGTCC...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCATTCTCTTTCTCTTGCTaGCTCTTTTTCTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPFSFSC*LFFSDF
Trigger: GAAGTCTGAGAAAAAGAGCAAGCAAGAGAAAGAGAA...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAAGAAGGAGTCTTCGTTaGCCTTCAAAGGACCCCAGC +
Preference number: 5 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPRRSLR*PSKDPS
Trigger: GCTGGGGTCCTTTGAAGGCAAACGAAGACTCCTTCT...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGTGTTGCACATACATATaGTTCTCAGCCTTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAECCTYI*FSALGA
Trigger: TGCTCCCAAGGCTGAGAACAATATGTATGTGCAACA...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCATTCATGGTGCTGTTGTaGACAGGGCCGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAFMVLL*TGPKMV
Trigger: CACCATCTTCGGCCCTGTCAACAACAGCACCATGAA...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGATGCTTTTTGTCCTCTTaGCAAACAATGCCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TQCGRMELATCSFSSCRGCFLSS*QTMPSF
Trigger: GAAGGAGGGCATTGTTTGCAAAGAGGACAAAAAGCA...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGTACTCCGGGCTCACTaGAAAATAGTTACGAATGTC +
Preference number: 5 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAEVLRAH*KIVTNV
Trigger: GACATTCGTAACTATTTTCAAGTGAGCCCGGAGTAC...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAAGGATACCAGGATTaGACATTTCCGTCTTTTCCG +
Preference number: 5 (lower is better)
Translates to: VRSVEEWSWPHVVLAAAEEGYQD*TFPSFP
Trigger: CGGAAAAGACGGAAATGTCAAATCCTGGTATCCTTC...CTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 90 bp CGTACACAATCACCATGGACCACATTGGGGAAGGATACCAGGATTTaGCATTTCCGTCTTTTCCGACTAGAAGCATGGAGAAGTACTCCG +
Preference number: 5 (lower is better)
Translates to: RTQSPWTTLGKDTRI*HFRLFRLEAWRSTP
Trigger: CGGAGTACTTCTCCATGCTTCTAGTCGGAAAAGACGGAAATGTCAAATCCTGGTATCCTTCCCCAATGTGGTCCATGGTGATTGTGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000479368.1
CDS GCA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTaGAGAGGAAACTGGCTGAGTCTAAGGTTACATATTTCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: TQCGRMELATCSFSS*RGNWLSLRLHISAQ
Trigger: CTGAGCAGAAATATGTAACCTTAGACTCAGCCAGTTTCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS GCA 90 bp TCTTGCCTGGATTCAGTCCCAGAAATGTTAGGACTACCTCAGTTTTaGTCCAAACCAAACTCAAACAACAGCAGCCACTGGGGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SCLDSVPEMLGLPQF*SKPNSNNSSHWGFR
Trigger: TCTGAAGCCCCAGTGGCTGCTGTTGTTTGAGTTTGGTTTGGAGCAAAACTGAGGTAGTCCTAACATTTCTGGGACTGAATCCAGGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473959.5
ENST00000480275.1
CDS CCA 90 bp CGGGCTCACTTGAAAATAGTTACGAATGTCTTTCACCAAATGGGCTaGTACGTCTTCTCGCTCAACAACAGAGCTCCCAAAATTGCACGC +
Preference number: 5 (lower is better)
Translates to: RAHLKIVTNVFHQMG*YVFSLNNRAPKIAR
Trigger: GCGTGCAATTTTGGGAGCTCTGTTGTTGAGCGAGAAGACGTACCAGCCCATTTGGTGAAAGACATTCGTAACTATTTTCAAGTGAGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461431.1
CDS-3UTR CAA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGGACTTGTGCTCTCCTaGGGTCCTCTTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAGLVLS*GPLSSS
Trigger: AGAAGAAGAAAGAGGACCCAAGGAGAGCACAAGTCC...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTATATTGTTCTCAGCCTaGGGAGCAGTGATCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVILFSA*GAVIRR
Trigger: CCTTCTGATCACTGCTCCCAAGGCTGAGAACAATAT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTATTTTCATGGTGCTGTaGTTGACAGGGCCGAAGATG +
Preference number: 5 (lower is better)
Translates to: GRKCSTQCGRMELATCSFIFMVL*LTGPKM
Trigger: CATCTTCGGCCCTGTCAACAACAGCACCATGAAAAT...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTACCATCCTGGTATCCTaGGTGGTAACTATGGTAACC +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVTILVS*VVTMVT
Trigger: GGTTACCATAGTTACCACCAAGGATACCAGGATGGT...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACAGTCACCCAAGAACTaGGATAGAGATATACAAGGA +
Preference number: 5 (lower is better)
Translates to: TQCGRMELATCSFSSCRGQSPKN*DRDIQG
Trigger: TCCTTGTATATCTCTATCCAAGTTCTTGGGTGACTG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCAAGGTGGGAGGATTGTTaGAGGGAAGCTGAGTTTGCA +
Preference number: 5 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPRWEDC*REAEFA
Trigger: TGCAAACTCAGCTTCCCTCAAACAATCCTCCCACCT...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTCAGCAGCCATCCTCTGAATGTATTTaGGTCCTTTTGCTAAGCTAT +
Preference number: 5 (lower is better)
Translates to: CHHHPQPSVTTTLIIQQPSSECI*VLLLSY
Trigger: ATAGCTTAGCAAAAGGACCAAAATACATTCAGAGGA...TGGCTGCTGAATGATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATCTTCATCCGGCTCCCTaGGCATATGTATCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNLHPAP*AYVSAH
Trigger: ATGGGCTGATACATATGCCAAGGGAGCCGGATGAAG...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGAGCCAATATGAAGTACTaGCTAAATCATGTGGTGCGT +
Preference number: 5 (lower is better)
Translates to: TQCGRMELATCSFSSCRGANMKY*LNHVVR
Trigger: ACGCACCACATGATTTAGCAAGTACTTCATATTGGC...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAAGTATCCAGAAGCCATaGACCATGTTAATGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPSIQKP*TMLMVE
Trigger: CTCCACCATTAACATGGTCAATGGCTTCTGGATACT...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGATGGACCGAGTCACTGTaGTGGCTGGGGCAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: FINKAATGFERIGSNFKRWTESL*WLGQEE
Trigger: TTCCTCCTGCCCCAGCCACAACAGTGACTCGGTCCA...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAATATTGTTCTCAGCCTaGGGAGCAGTGATCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAILFSA*GAVIRR
Trigger: CCTTCTGATCACTGCTCCCAAGGCTGAGAACAATAT...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCATTTTCATGGTGCTGTaGTTGACAGGGCCGAAGATG +
Preference number: 5 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIIFMVL*LTGPKM
Trigger: CATCTTCGGCCCTGTCAACAACAGCACCATGAAAAT...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTGCTTTTTGTCCTCTTaGCAAACAATGCCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GRKCSTQCGRMELATCSFCFLSS*QTMPSF
Trigger: GAAGGAGGGCATTGTTTGCAAAGAGGACAAAAAGCA...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTGAAGGATACCAGGATTaGACATTTCCGTCTTTTCCG +
Preference number: 5 (lower is better)
Translates to: GRKCSTQCGRMELATCSFEGYQD*TFPSFP
Trigger: CGGAAAAGACGGAAATGTCAAATCCTGGTATCCTTC...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTGAGCCAGAATTATTATaGATAGAGGGGCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: KGRKCSTQCGRMELATCSEPELL*IEGPGK
Trigger: TTTCCCAGGCCCCTCTATCAATAATAATTCTGGCTC...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS TCA 90 bp TGTGCTGACACAGGACGTCCCTTAAAGTCCAGTCCTGGCGATTTCTaGATCTCACTCTTTCCCTCTTTAAAGTTCCAGGATCCTTCTTAT +
Preference number: 5 (lower is better)
Translates to: CADTGRPLKSSPGDF*ISLFPSLKFQDPSY
Trigger: ATAAGAAGGATCCTGGAACTTTAAAGAGGGAAAGAGTGAGATTCAGAAATCGCCAGGACTGGACTTTAAGGGACGTCCTGTGTCAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000469554.1
ENST00000475181.1
CDS GCA 90 bp TCTTGCCTGGATTCAGTCCCAGAAATGTTAGGACTACCTCAGTTTTaGTCCAAACCAAACTCAAACAACAGCAGCCACTGGAAATCAAGG +
Preference number: 5 (lower is better)
Translates to: SCLDSVPEMLGLPQF*SKPNSNNSSHWKSR
Trigger: CCTTGATTTCCAGTGGCTGCTGTTGTTTGAGTTTGGTTTGGAGCAAAACTGAGGTAGTCCTAACATTTCTGGGACTGAATCCAGGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000469554.1
ENST00000475181.1
CDS CCA 90 bp CTGAGGTCATACTTCTCCTCATACTCATTACTAAGAATTTTGTCCTaGGCCTTCTTTTTGGGAGGTTTCTCCTTTGCTGGCTTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LRSYFSSYSLLRILS*AFFLGGFSFAGLGG
Trigger: TCCTCCCAAGCCAGCAAAGGAGAAACCTCCCAAAAAGAAGGCCCAGGACAAAATTCTTAGTAATGAGTATGAGGAGAAGTATGACCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 90 bp CGGGCTCACTTGAAAATAGTTACGAATGTCTTTCACCAAATGGGCTaGTACGTCTTCTCGCTCAACAACAGAGCTCCCATTAATTGGGAA +
Preference number: 5 (lower is better)
Translates to: RAHLKIVTNVFHQMG*YVFSLNNRAPINWE
Trigger: TTCCCAATTAATGGGAGCTCTGTTGTTGAGCGAGAAGACGTACCAGCCCATTTGGTGAAAGACATTCGTAACTATTTTCAAGTGAGCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000479368.1
CDS-3UTR CAA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTACTCCGGGCTCACTaGAAAATAGTTACGAATGTC +
Preference number: 5 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVVLRAH*KIVTNV
Trigger: GACATTCGTAACTATTTTCAAGTGAGCCCGGAGTAC...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATTCACCATGGACCACATaGGGGAAGGATACCAGGATT +
Preference number: 5 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDSPWTT*GKDTRI
Trigger: AATCCTGGTATCCTTCCCCAATGTGGTCCATGGTGA...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTCTTATTTTAAGAAATaGCCACCATCACCCCCAACC +
Preference number: 5 (lower is better)
Translates to: GRKCSTQCGRMELATCSFSYFKK*PPSPPT
Trigger: GGTTGGGGGTGATGGTGGCAATTTCTTAAAATAAGA...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAATCTTTTAAAAATATaGCTGTTCGGGCCGGGCGCA +
Preference number: 5 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAANLLKI*LFGPGA
Trigger: TGCGCCCGGCCCGAACAGCAATATTTTTAAAAGATT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCTGTGTATCATTTCATaGATTTCTGTGACAGCTGGC +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVLCIIS*ISVTAG
Trigger: GCCAGCTGTCACAGAAATCAATGAAATGATACACAG...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp ACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTGCAGAGGACAAGTTAGGAAACTGTaGAAGAACAAATATGTCCCT +
Preference number: 5 (lower is better)
Translates to: TQCGRMELATCSFSSCRGQVRKL*KNKYVP
Trigger: AGGGACATATTTGTTCTTCAACAGTTTCCTAACTTG...TCCTCTGCAGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATAAAGCCAAAGAACGTTaGCCCATGGGCAGTCTTAGC +
Preference number: 5 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDKAKER*PMGSLS
Trigger: GCTAAGACTGCCCATGGGCAAACGTTCTTTGGCTTT...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TCCCACTGCCCTTATCTTGGCCCAAAGACAAAACTGGACATTCTGATGACCCCAAGGAAGGTATACTTATaGCAGAGGAGAAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: SHCPYLGPKTKLDILMTPRKVYL*QRRKAK
Trigger: TTTGGCTTTTCTCCTCTGCAATAAGTATACCTTCCT...TGGGGTCATCAGAATGTCCAGTTTTGTCTTTGGGCCAAGATAAGGGCAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATCAGGTCTTCCCAAATTaGGGCATATTCCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDQVFPN*GIFLPL
Trigger: CAGAGGCAGGAATATGCCCAAATTTGGGAAGACCTG...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS GCA 90 bp CTGGTAGCCATCTTGCAGAAACTTTCCAGATATTCATCACGTTGTTaGACATACATATTGTTCTCAGCCTTGGGAGCAGTGATCAGAAGG +
Preference number: 5 (lower is better)
Translates to: LVAILQKLSRYSSRC*TYILFSALGAVIRR
Trigger: CCTTCTGATCACTGCTCCCAAGGCTGAGAACAATATGTATGTGCAACAACGTGATGAATATCTGGAAAGTTTCTGCAAGATGGCTACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CCA 90 bp AGCACGTTCAGAGTGGACTCAGTGAGGAGTGAGAAGGCTGTTCTTTaGGGTGGGGTAAAGTTTTTAAACTCCACACATCATCATAAATCA +
Preference number: 5 (lower is better)
Translates to: STFRVDSVRSEKAVL*GGVKFLNSTHHHKS
Trigger: TGATTTATGATGATGTGTGGAGTTTAAAAACTTTACCCCACCCCAAAGAACAGCCTTCTCACTCCTCACTGAGTCCACTCTGAACGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439685.6
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTCTCTTTCTCTTGCTaGCTCTTTTTCTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVFSFSC*LFFSDF
Trigger: GAAGTCTGAGAAAAAGAGCAAGCAAGAGAAAGAGAA...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCTTCCTGGTAGCCATCTaGCAGAAACTTTCCAGATAT +
Preference number: 5 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIFLVAI*QKLSRY
Trigger: ATATCTGGAAAGTTTCTGCAAGATGGCTACCAGGAA...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTATTCCTGGTAGCCATCTaGCAGAAACTTTCCAGATAT +
Preference number: 5 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVFLVAI*QKLSRY
Trigger: ATATCTGGAAAGTTTCTGCAAGATGGCTACCAGGAA...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCATACTTTCTCTGGCTTTaGTGGCCAATATTACTGGAC +
Preference number: 5 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPYFLWL*WPILLD
Trigger: GTCCAGTAATATTGGCCACAAAAGCCAGAGAAAGTA...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAATAACAAAGCTGGGCTaGGTACTTTCTCTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVITKLG*VLSLAF
Trigger: AAAAGCCAGAGAAAGTACCAAGCCCAGCTTTGTTAT...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGAAGAAAGTGATTTCTaGAGATGGAATCTACTCGCG +
Preference number: 5 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVEESDF*RWNLLA
Trigger: CGCGAGTAGATTCCATCTCAAGAAATCACTTTCTTC...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCGTCTGGTTCATGAGTTaGAAGAAAAGAAGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIVWFMS*KKRSLV
Trigger: CACAAGGCTTCTTTTCTTCAAACTCATGAACCAGAC...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTTTACAAATTGAAGGTTaGTGGCAACCCTGCATCAAG +
Preference number: 5 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAALQIEG*WQPCIK
Trigger: CTTGATGCAGGGTTGCCACAAACCTTCAATTTGTAA...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTCCATTCTCCATGTCATaGTGTAATCCACTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: KAGNVVRSVEEWSWPHVVPFSMS*CNPLFP
Trigger: AGGAAAAAGTGGATTACACAATGACATGGAGAATGG...AACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439685.6
CDS-3UTR CAA 90 bp CAGGAGAAACTGTGCCTGAACTGTGAGTATCCAGAAGCCATTGACCATGTTAATAAAGAAATCAGAAGTTaGGTTCCCAGGACAGTTTCC +
Preference number: 5 (lower is better)
Translates to: QEKLCLNCEYPEAIDHVNKEIRS*VPRTVS
Trigger: GGAAACTGTCCTGGGAACCAAACTTCTGATTTCTTT...ATTAACATGGTCAATGGCTTCTGGATACTCACAGTTCAGGCACAGTTTCTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTTCATTACTAAGAATTTaGTCCTGGGCCTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: GRKCSTQCGRMELATCSFSLLRI*SWAFFL
Trigger: CAAAAAGAAGGCCCAGGACAAAATTCTTAGTAATGA...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTCAGACTTCATTGTTATaGGTACCTCATAGTATTGCT +
Preference number: 5 (lower is better)
Translates to: EKGRKCSTQCGRMELATCQTSLL*VPHSIA
Trigger: AGCAATACTATGAGGTACCAATAACAATGAAGTCTG...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp GAAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTCAAACACAGACTTCATaGTTATTGGTACCTCATAGT +
Preference number: 5 (lower is better)
Translates to: EKGRKCSTQCGRMELATCQTQTS*LLVPHS
Trigger: ACTATGAGGTACCAATAACAATGAAGTCTGTGTTTG...ACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp AAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTCAAACACAGACTTCATaGTTATTGGTACCTCATAGT +
Preference number: 5 (lower is better)
Translates to: KGRKCSTQCGRMELATCSQTQTS*LLVPHS
Trigger: ACTATGAGGTACCAATAACAATGAAGTCTGTGTTTG...ACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCTTGGTCCATTGTAACTaGGTAACCTTTGCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLILVHCN*VTFALK
Trigger: TTTCAAGGCAAAGGTTACCAAGTTACAATGGACCAA...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAAAGGATTATACTCCTTaGCATTCCAGCTACTTTGGT +
Preference number: 5 (lower is better)
Translates to: GNVVRSVEEWSWPHVVLAKDYTP*HSSYFG
Trigger: ACCAAAGTAGCTGGAATGCAAAGGAGTATAATCCTT...TGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp GGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGAAATCCATTTTTATaGGCAACTTTGGGCTATGCT +
Preference number: 5 (lower is better)
Translates to: GRKCSTQCGRMELATCSFRNPFL*ATLGYA
Trigger: AGCATAGCCCAAAGTTGCCAATAAAAATGGATTTCT...AAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCATTCAGGTTAGCTAGTTaGCTAATCCTCACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPFRLAS*LILTVS
Trigger: TGAAACTGTGAGGATTAGCAAACTAGCTAACCTGAA...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTAGTTTTAGCAGCTAGAGAGATTACGCATTaGTGGTCTCAAGTTAGGAAA +
Preference number: 5 (lower is better)
Translates to: NVVRSVEEWSWPHVVLAAREITH*WSQVRK
Trigger: TTTCCTAACTTGAGACCACAAATGCGTAATCTCTCT...AGCTGCTAAAACTACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGAGTATCAGCCCATGGATaGGGAGGTGTAGGACCATTC +
Preference number: 5 (lower is better)
Translates to: FINKAATGFERIGSNFKRVSAHG*GGVGPF
Trigger: GAATGGTCCTACACCTCCCAATCCATGGGCTGATAC...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp ACAACCAGCAATTTCGGCAAAGCTATGTCCTCAAGAGTCTTCCAGATTTCCCCACAAATGGTTCTTTCTTaGCACATATCAAGGCTTTCG +
Preference number: 5 (lower is better)
Translates to: TTSNFGKAMSSRVFQISPQMVLS*HISRLS
Trigger: CGAAAGCCTTGATATGTGCAAAGAAAGAACCATTTG...TGGGGAAATCTGGAAGACTCTTGAGGACATAGCTTTGCCGAAATTGCTGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCTCATTACTAAGAATTTaGTCCTGGGCCTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLISLLRI*SWAFFL
Trigger: CAAAAAGAAGGCCCAGGACAAAATTCTTAGTAATGA...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp AAAAAGGCAGGAAATGTAGTACGCAGTGTGGAAGAATGGAGCTGGCCACATGTACAGACTTCATTGTTATaGGTACCTCATAGTATTGCT +
Preference number: 5 (lower is better)
Translates to: KKAGNVVRSVEEWSWPHVQTSLL*VPHSIA
Trigger: AGCAATACTATGAGGTACCAATAACAATGAAGTCTG...TACATGTGGCCAGCTCCATTCTTCCACACTGCGTACTACATTTCCTGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS-3UTR CAA 90 bp ATTTTAAGAAATTGCCACCATCACCCCCAACCTTCAGTAACCACCACCCTGATCCATTTATTTGGGAGTTaGGTAAGAAACGTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: ILRNCHHHPQPSVTTTLIHLFGS*VRNVWE
Trigger: TTCCCAAACGTTTCTTACCAAACTCCCAAATAAATG...GATCAGGGTGGTGGTTACTGAAGGTTGGGGGTGATGGTGGCAATTTCTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS CCA 90 bp ACAATGCCCTCCTTCTTCTGCTTCTCCATATCTTTGATTCGGGACTaGAAAGTATCGATCAGATCAAACACAGACTTCATTGTTATTGGT +
Preference number: 5 (lower is better)
Translates to: TMPSFFCFSISLIRD*KVSIRSNTDFIVIG
Trigger: ACCAATAACAATGAAGTCTGTGTTTGATCTGATCGATACTTTCCAGTCCCGAATCAAAGATATGGAGAAGCAGAAGAAGGAGGGCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS-3UTR CAA 90 bp TCAGTAACCACCACCCTGATCATTCAGCAGCCATCAACATCAATGCAAAAAGATGAAGATGTGACTGAATaGCTGCAATCTCATTACAAA +
Preference number: 5 (lower is better)
Translates to: SVTTTLIIQQPSTSMQKDEDVTE*LQSHYK
Trigger: TTTGTAATGAGATTGCAGCAATTCAGTCACATCTTC...ATCTTTTTGCATTGATGTTGATGGCTGCTGAATGATCAGGGTGGTGGTTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS-3UTR CAA 90 bp TTCATTAATAAAGCAGCAACAGGGTTTGAGAGGATTGGCTCCAATTTCAAAAGAATGGAATGCAGAGGGTaGCAAAAGAAATCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: FINKAATGFERIGSNFKRMECRG*QKKSEV
Trigger: AACTTCTGATTTCTTTTGCAACCCTCTGCATTCCAT...TCTTTTGAAATTGGAGCCAATCCTCTCAAACCCTGTTGCTGCTTTATTAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206423.8
CDS CAA 72 bp GGGTCTCGGTGGCCATGTTCCCGCCTGTCCATGCGGTaGTCCCGGAAACGGCCTGGGCCAGCAGCCCTTGTG +
Preference number: 6 (lower is better)
Translates to: GSRWPCSRLSMR*SRKRPGPAALV
Trigger: CACAAGGGCTGCTGGCCCAGGCCGTTTCCGGGACAACCGCATGGACAGGCGGGAACATGGCCACCGAGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 90 bp GAGCCCCTGGCTGCTGGTCTTTGCTCAGGTCTCACGGCGGCCCCATaGATGTCCGAGCGGGCTGGCGGCTCTGTTGGGCGAGCTAGTCTC +
Preference number: 6 (lower is better)
Translates to: EPLAAGLCSGLTAAP*MSERAGGSVGRASL
Trigger: GAGACTAGCTCGCCCAACAGAGCCGCCAGCCCGCTCGGACATCAATGGGGCCGCCGTGAGACCTGAGCAAAGACCAGCAGCCAGGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS TCA 72 bp CTGCTGGTCTTTGCTCAGGTCTCACGGCGGCCCCATTaGTGTCCGAGCGGGCTGGCGGCTCTGTTGGGCGAG +
Preference number: 6 (lower is better)
Translates to: LLVFAQVSRRPH*CPSGLAALLGE
Trigger: CTCGCCCAACAGAGCCGCCAGCCCGCTCGGACATCAATGGGGCCGCCGTGAGACCTGAGCAAAGACCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS GCA 72 bp CATTTGGGTCTCGGTGGCCATGTTCCCGCCTGTCCATaGGGTTGTCCCGGAAACGGCCTGGGCCAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: HLGLGGHVPACP*GCPGNGLGQQP
Trigger: GGGCTGCTGGCCCAGGCCGTTTCCGGGACAACCGCATGGACAGGCGGGAACATGGCCACCGAGACCCAAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 72 bp GCTGCTGGTCTTTGCTCAGGTCTCACGGCGGCCCCATaGATGTCCGAGCGGGCTGGCGGCTCTGTTGGGCGA +
Preference number: 6 (lower is better)
Translates to: AAGLCSGLTAAP*MSERAGGSVGR
Trigger: TCGCCCAACAGAGCCGCCAGCCCGCTCGGACATCAATGGGGCCGCCGTGAGACCTGAGCAAAGACCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 72 bp GGCTTGGGAGGACCTGGCACCACATTTGGGTCTCGGTaGCCATGTTCCCGCCTGTCCATGCGGTTGTCCCGG +
Preference number: 6 (lower is better)
Translates to: GLGGPGTTFGSR*PCSRLSMRLSR
Trigger: CCGGGACAACCGCATGGACAGGCGGGAACATGGCCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 72 bp GGGATGAGGCTAGGGTCCAGGGGCTGCTCCAGGATCTaGCCCTCGCTGGTGATCCTTCTCACCTTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GMRLGSRGCSRI*PSLVILLTLPP
Trigger: AGGAGGCAAGGTGAGAAGGATCACCAGCGAGGGCCAGATCCTGGAGCAGCCCCTGGACCCTAGCCTCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 90 bp CTCATCTCTGATCATCTCACGCGGAGAGCCCCTGGCTGCTGGTCTTaGCTCAGGTCTCACGGCGGCCCCATTGATGTCCGAGCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: LISDHLTRRAPGCWS*LRSHGGPIDVRAGW
Trigger: CCAGCCCGCTCGGACATCAATGGGGCCGCCGTGAGACCTGAGCAAAGACCAGCAGCCAGGGGCTCTCCGCGTGAGATGATCAGAGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CAA 90 bp ACCACATTTGGGTCTCGGTGGCCATGTTCCCGCCTGTCCATGCGGTaGTCCCGGAAACGGCCTGGGCCAGCAGCCCTTGTGCTGGGTTCT +
Preference number: 6 (lower is better)
Translates to: TTFGSRWPCSRLSMR*SRKRPGPAALVLGS
Trigger: AGAACCCAGCACAAGGGCTGCTGGCCCAGGCCGTTTCCGGGACAACCGCATGGACAGGCGGGAACATGGCCACCGAGACCCAAATGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS GCA 72 bp ATCATCTCACGCGGAGAGCCCCTGGCTGCTGGTCTTTaGTCAGGTCTCACGGCGGCCCCATTGATGTCCGAG +
Preference number: 6 (lower is better)
Translates to: IISRGEPLAAGL*SGLTAAPLMSE
Trigger: CTCGGACATCAATGGGGCCGCCGTGAGACCTGAGCAAAGACCAGCAGCCAGGGGCTCTCCGCGTGAGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CAA 90 bp TGGGAGGTTTCTCCTTTGCTGGCTTGGGAGGACCTGGCACCACATTaGGGTCTCGGTGGCCATGTTCCCGCCTGTCCATGCGGTTGTCCC +
Preference number: 6 (lower is better)
Translates to: WEVSPLLAWEDLAPH*GLGGHVPACPCGCP
Trigger: GGGACAACCGCATGGACAGGCGGGAACATGGCCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 72 bp AGGGGAACATTCCCCACCTGCAGCTCGTCCTCCAGCTaGGAGGCAGTAGGCCGGCTGAGGTCATACTTCTCC +
Preference number: 6 (lower is better)
Translates to: RGTFPTCSSSSS*EAVGRLRSYFS
Trigger: GGAGAAGTATGACCTCAGCCGGCCTACTGCCTCTCAGCTGGAGGACGAGCTGCAGGTGGGGAATGTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS GCA 72 bp CTCATCAGCTTAGGGATGAGGCTAGGGTCCAGGGGCTaGTCCAGGATCTGGCCCTCGCTGGTGATCCTTCTC +
Preference number: 6 (lower is better)
Translates to: LISLGMRLGSRG*SRIWPSLVILL
Trigger: GAGAAGGATCACCAGCGAGGGCCAGATCCTGGAGCAGCCCCTGGACCCTAGCCTCATCCCTAAGCTGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 72 bp TCTCCTTTGCTGGCTTGGGAGGACCTGGCACCACATTaGGGTCTCGGTGGCCATGTTCCCGCCTGTCCATGC +
Preference number: 6 (lower is better)
Translates to: SPLLAWEDLAPH*GLGGHVPACPC
Trigger: GCATGGACAGGCGGGAACATGGCCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 72 bp GCAACATTCTTGACCGAGCTGAGGACCCCTCATCTCTaGTCATCTCACGCGGAGAGCCCCTGGCTGCTGGTC +
Preference number: 6 (lower is better)
Translates to: ATFLTELRTPHL*SSHAESPWLLV
Trigger: GACCAGCAGCCAGGGGCTCTCCGCGTGAGATGATCAGAGATGAGGGGTCCTCAGCTCGGTCAAGAATGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 72 bp CGTCCTCCGTGGCTGCCTCTAATAGTGGCATGGGGGTaGGGTTCTGATCCACACACTAGCCACATGGCCAAC +
Preference number: 6 (lower is better)
Translates to: RPPWLPLIVAWG*GSDPHTSHMAN
Trigger: GTTGGCCATGTGGCTAGTGTGTGGATCAGAACCCCACCCCCATGCCACTATTAGAGGCAGCCACGGAGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 72 bp ATCTCTGATCATCTCACGCGGAGAGCCCCTGGCTGCTaGTCTTTGCTCAGGTCTCACGGCGGCCCCATTGAT +
Preference number: 6 (lower is better)
Translates to: ISDHLTRRAPGC*SLLRSHGGPID
Trigger: ATCAATGGGGCCGCCGTGAGACCTGAGCAAAGACCAGCAGCCAGGGGCTCTCCGCGTGAGATGATCAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS TCA 72 bp CGGTCTCGTGTGTCTGTGTGTGCCAGTCCCTTGTGCTaGCACAGGACGTCCCTTAAAGTCCAGTCCTGGCGA +
Preference number: 6 (lower is better)
Translates to: RSRVSVCASPLC*HRTSLKVQSWR
Trigger: TCGCCAGGACTGGACTTTAAGGGACGTCCTGTGTCAGCACAAGGGACTGGCACACACAGACACACGAGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000469554.1
ENST00000475181.1
CDS TCA 72 bp GCTCACAGTACACATCGTCCTTCAGCAGGCTCATCATaGGGCGGTAGTAGCCTTCCGAGGCATGAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: AHSTHRPSAGSS*GGSSLPRHEGL
Trigger: CAGCCCCTCATGCCTCGGAAGGCTACTACCGCCTCATGATGAGCCTGCTGAAGGACGATGTGTACTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS GCA 72 bp ACCTCCCAGTGTGCCTCAGAAACCGAGCTGGCCTACTaGTGTCCGGAGAAACCAAAGGCACTTTCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: TSQCASETELAY*CPEKPKALSVL
Trigger: GAGGACGGAAAGTGCCTTTGGTTTCTCCGGACAGCAGTAGGCCAGCTCGGTTTCTGAGGCACACTGGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS GCA 72 bp AGAGTGGATCTCTCAATTCCGCGAGACCTCCCAGTGTaGCTCAGAAACCGAGCTGGCCTACTGCTGTCCGGA +
Preference number: 6 (lower is better)
Translates to: RVDLSIPRDLPV*LRNRAGLLLSG
Trigger: TCCGGACAGCAGTAGGCCAGCTCGGTTTCTGAGGCACACTGGGAGGTCTCGCGGAATTGAGAGATCCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 72 bp TCCGCGAGACCTCCCAGTGTGCCTCAGAAACCGAGCTaGCCTACTGCTGTCCGGAGAAACCAAAGGCACTTT +
Preference number: 6 (lower is better)
Translates to: SARPPSVPQKPS*PTAVRRNQRHF
Trigger: AAAGTGCCTTTGGTTTCTCCGGACAGCAGTAGGCCAGCTCGGTTTCTGAGGCACACTGGGAGGTCTCGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CAA 90 bp GTCTCAACACGGGCACACTCCTCCTTCTCTGGAGAGGCTGAAGGTTaGGTTCCTCCAGAGTGGATCTCTCAATTCCGCGAGACCTCCCAG +
Preference number: 6 (lower is better)
Translates to: VSTRAHSSFSGEAEG*VPPEWISQFRETSQ
Trigger: CTGGGAGGTCTCGCGGAATTGAGAGATCCACTCTGGAGGAACCAAACCTTCAGCCTCTCCAGAGAAGGAGGAGTGTGCCCGTGTTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS TCA 72 bp GGCGGTAGTAGCCTTCCGAGGCATGAGGGGCTGAGATaGCCCATACTCTGTTCTTCCCTGCAAAGCTGGCAA +
Preference number: 6 (lower is better)
Translates to: GGSSLPRHEGLR*PILCSSLQSWQ
Trigger: TTGCCAGCTTTGCAGGGAAGAACAGAGTATGGGTCATCTCAGCCCCTCATGCCTCGGAAGGCTACTACCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 72 bp ACTTTCCGTCCTCCGTGGCTGCCTCTAATAGTGGCATaGGGGTGGGGTTCTGATCCACACACTAGCCACATG +
Preference number: 6 (lower is better)
Translates to: TFRPPWLPLIVA*GWGSDPHTSHM
Trigger: CATGTGGCTAGTGTGTGGATCAGAACCCCACCCCCATGCCACTATTAGAGGCAGCCACGGAGGACGGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 72 bp CCTTCCTCACCTGCCTGGTGGAAGAGCACAATCTGTTaGATGTGCCTCTCCGCCAGCTCACAGTACACATCG +
Preference number: 6 (lower is better)
Translates to: PSSPAWWKSTIC*MCLSASSQYTS
Trigger: CGATGTGTACTGTGAGCTGGCGGAGAGGCACATCCAACAGATTGTGCTCTTCCACCAGGCAGGTGAGGAAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 72 bp CGGCCAGTTTTCTCAGGACCTTCACCCGACTCTCTCTaGTTGGTGGGACTTGTGCTCTCCTTGGGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: RPVFSGPSPDSL*LVGLVLSLGPL
Trigger: AAGAGGACCCAAGGAGAGCACAAGTCCCACCAACCAGAGAGAGTCGGGTGAAGGTCCTGAGAAAACTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 72 bp CGGGCACACTCCTCCTTCTCTGGAGAGGCTGAAGGTTaGGTTCCTCCAGAGTGGATCTCTCAATTCCGCGAG +
Preference number: 6 (lower is better)
Translates to: RAHSSFSGEAEG*VPPEWISQFRE
Trigger: CTCGCGGAATTGAGAGATCCACTCTGGAGGAACCAAACCTTCAGCCTCTCCAGAGAAGGAGGAGTGTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CAA 72 bp TGGGCCTTCTTTTTGGGAGGTTTCTCCTTTGCTGGCTaGGGAGGACCTGGCACCACATTTGGGTCTCGGTGG +
Preference number: 6 (lower is better)
Translates to: WAFFLGGFSFAG*GGPGTTFGSRW
Trigger: CCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCAAAAAGAAGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 90 bp GACAAAGCCCTTCTGCCTGATCTTCTCGATCCTACGGATGGGGCCTaGGTCGATGACCTCGTACATGGCTTCCAGCCTAACGGGATATGG +
Preference number: 6 (lower is better)
Translates to: DKALLPDLLDPTDGA*VDDLVHGFQPNGIW
Trigger: CCATATCCCGTTAGGCTGGAAGCCATGTACGAGGTCATCGACCAAGGCCCCATCCGTAGGATCGAGAAGATCAGGCAGAAGGGCTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 72 bp CAGAGTACCGCCACAGATCCACAGCCTGTCCTGATCTaGGAGCTGAGCCGATGCCTTTTCTTTCTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: QSTATDPQPVLI*ELSRCLFFLAV
Trigger: CACAGCCAGAAAGAAAAGGCATCGGCTCAGCTCTCAGATCAGGACAGGCTGTGGATCTGTGGCGGTACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000469554.1
CDS GCA 72 bp GCTGGTGATCCTTCTCACCTTGCCTCCTTCCTCACCTaGCTGGTGGAAGAGCACAATCTGTTGGATGTGCCT +
Preference number: 6 (lower is better)
Translates to: AGDPSHLASFLT*LVEEHNLLDVP
Trigger: AGGCACATCCAACAGATTGTGCTCTTCCACCAGGCAGGTGAGGAAGGAGGCAAGGTGAGAAGGATCACCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 72 bp TTCTCTGGAGAGGCTGAAGGTTTGGTTCCTCCAGAGTaGATCTCTCAATTCCGCGAGACCTCCCAGTGTGCC +
Preference number: 6 (lower is better)
Translates to: FSGEAEGLVPPE*ISQFRETSQCA
Trigger: GGCACACTGGGAGGTCTCGCGGAATTGAGAGATCCACTCTGGAGGAACCAAACCTTCAGCCTCTCCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 72 bp TCTTCCCTGCAAAGCTGGCAAGGATGTTGGGAGAGCTaGACCCCGAAGGGAAACGCAACATTCTTGACCGAG +
Preference number: 6 (lower is better)
Translates to: SSLQSWQGCWES*TPKGNATFLTE
Trigger: CTCGGTCAAGAATGTTGCGTTTCCCTTCGGGGTCCAGCTCTCCCAACATCCTTGCCAGCTTTGCAGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 72 bp GATGACCTCGTACATGGCTTCCAGCCTAACGGGATATaGATAGCGCTCCTCCACCTGCAGCGTCTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: DDLVHGFQPNGI*IALLHLQRLLQ
Trigger: CTGAAGAAGACGCTGCAGGTGGAGGAGCGCTATCCATATCCCGTTAGGCTGGAAGCCATGTACGAGGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 72 bp TTCTGCCTGATCTTCTCGATCCTACGGATGGGGCCTTaGTCGATGACCTCGTACATGGCTTCCAGCCTAACG +
Preference number: 6 (lower is better)
Translates to: FCLIFSILRMGP*SMTSYMASSLT
Trigger: CGTTAGGCTGGAAGCCATGTACGAGGTCATCGACCAAGGCCCCATCCGTAGGATCGAGAAGATCAGGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 72 bp CTTCTGCCTGATCTTCTCGATCCTACGGATGGGGCCTaGGTCGATGACCTCGTACATGGCTTCCAGCCTAAC +
Preference number: 6 (lower is better)
Translates to: LLPDLLDPTDGA*VDDLVHGFQPN
Trigger: GTTAGGCTGGAAGCCATGTACGAGGTCATCGACCAAGGCCCCATCCGTAGGATCGAGAAGATCAGGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 72 bp CCTTCAAAGGACCCCAGCAGGTCGGCCACTGACTTCTaGGGACTCTGCGTGAAGTGTTTGTTGGTGGGTTTC +
Preference number: 6 (lower is better)
Translates to: PSKDPSRSATDF*GLCVKCLLVGF
Trigger: GAAACCCACCAACAAACACTTCACGCAGAGTCCCAAGAAGTCAGTGGCCGACCTGCTGGGGTCCTTTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 90 bp ATTTTGTCCTGGGCCTTCTTTTTGGGAGGTTTCTCCTTTGCTGGCTaGGGAGGACCTGGCACCACATTTGGGTCTCGGTGGCCATGTTCC +
Preference number: 6 (lower is better)
Translates to: ILSWAFFLGGFSFAG*GGPGTTFGSRWPCS
Trigger: GGAACATGGCCACCGAGACCCAAATGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCAAAAAGAAGGCCCAGGACAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 72 bp CAGAGGCCTTACATTTCTGGACAAAGCCCTTCTGCCTaGTCTTCTCGATCCTACGGATGGGGCCTTGGTCGA +
Preference number: 6 (lower is better)
Translates to: QRPYISGQSPSA*SSRSYGWGLGR
Trigger: TCGACCAAGGCCCCATCCGTAGGATCGAGAAGATCAGGCAGAAGGGCTTTGTCCAGAAATGTAAGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 72 bp CCAGCAGGTCGGCCACTGACTTCTTGGGACTCTGCGTaGAGTGTTTGTTGGTGGGTTTCTGATAGCCATCCT +
Preference number: 6 (lower is better)
Translates to: PAGRPLTSWDSA*SVCWWVSDSHP
Trigger: AGGATGGCTATCAGAAACCCACCAACAAACACTTCACGCAGAGTCCCAAGAAGTCAGTGGCCGACCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 72 bp ATTGCACGCCTGACCACTGAGGGCAGAGAGCTGCTGTaGATAGGCCCAGTCTTCATCGTTAGGAGCAGAGAT +
Preference number: 6 (lower is better)
Translates to: IARLTTEGRELL*IGPVFIVRSRD
Trigger: ATCTCTGCTCCTAACGATGAAGACTGGGCCTATTCACAGCAGCTCTCTGCCCTCAGTGGTCAGGCGTGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
ENST00000479368.1
CDS TCA 72 bp TTATGTGGCGCAGACCAAAATTGCACGCCTGACCACTaGGGGCAGAGAGCTGCTGTGAATAGGCCCAGTCTT +
Preference number: 6 (lower is better)
Translates to: LCGADQNCTPDH*GQRAAVNRPSL
Trigger: AAGACTGGGCCTATTCACAGCAGCTCTCTGCCCTCAGTGGTCAGGCGTGCAATTTTGGTCTGCGCCACATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000479368.1
CDS TCA 72 bp CAACAACAGAGCTCCCAAAATTGCACGCCTGACCACTaGGGGCAGAGAGCTGCTGTGAATAGGCCCAGTCTT +
Preference number: 6 (lower is better)
Translates to: QQQSSQNCTPDH*GQRAAVNRPSL
Trigger: AAGACTGGGCCTATTCACAGCAGCTCTCTGCCCTCAGTGGTCAGGCGTGCAATTTTGGGAGCTCTGTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461431.1
CDS GCA 72 bp ACACCAGAGGCCTTACATTTCTGGACAAAGCCCTTCTaGCTGATCTTCTCGATCCTACGGATGGGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: TPEALHFWTKPF*LIFSILRMGPW
Trigger: CCAAGGCCCCATCCGTAGGATCGAGAAGATCAGGCAGAAGGGCTTTGTCCAGAAATGTAAGGCCTCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 72 bp CTCAACACGGGCACACTCCTCCTTCTCTGGAGAGGCTaGAGGTTTGGTTCCTCCAGAGTGGATCTCTCAATT +
Preference number: 6 (lower is better)
Translates to: LNTGTLLLLWRG*RFGSSRVDLSI
Trigger: AATTGAGAGATCCACTCTGGAGGAACCAAACCTTCAGCCTCTCCAGAGAAGGAGGAGTGTGCCCGTGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS TCA 72 bp TACTCATCTTCTGGGCAGCGCATCCCCAGTGACTGCTaGATCGCCATTTCCTGTCTCCGAAGTTGCATCGAA +
Preference number: 6 (lower is better)
Translates to: YSSSGQRIPSDC*IAISCLRSCIE
Trigger: TTCGATGCAACTTCGGAGACAGGAAATGGCGATTCAGCAGTCACTGGGGATGCGCTGCCCAGAAGATGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000479368.1
CDS CCA 72 bp ATACTCTGTTCTTCCCTGCAAAGCTGGCAAGGATGTTaGGAGAGCTGGACCCCGAAGGGAAACGCAACATTC +
Preference number: 6 (lower is better)
Translates to: ILCSSLQSWQGC*ESWTPKGNATF
Trigger: GAATGTTGCGTTTCCCTTCGGGGTCCAGCTCTCCCAACATCCTTGCCAGCTTTGCAGGGAAGAACAGAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000475181.1
CDS CCA 72 bp ACCACCTGGCCCTCTACACCAGAGGCCTTACATTTCTaGACAAAGCCCTTCTGCCTGATCTTCTCGATCCTA +
Preference number: 6 (lower is better)
Translates to: TTWPSTPEALHF*TKPFCLIFSIL
Trigger: TAGGATCGAGAAGATCAGGCAGAAGGGCTTTGTCCAGAAATGTAAGGCCTCTGGTGTAGAGGGCCAGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 72 bp CAGTTTTCTCAGGACCTTCACCCGACTCTCTCTGGTTaGTGGGACTTGTGCTCTCCTTGGGTCCTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: QFSQDLHPTLSG*WDLCSPWVLFL
Trigger: AAGAAAGAGGACCCAAGGAGAGCACAAGTCCCACCAACCAGAGAGAGTCGGGTGAAGGTCCTGAGAAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 72 bp ACCTGCAGCGTCTTCTTCAGCAGCACCATGCCAAACTaGCCCTTCTCCAGCTTCAGGAAGCTCATCAGCTTA +
Preference number: 6 (lower is better)
Translates to: TCSVFFSSTMPN*PFSSFRKLISL
Trigger: TAAGCTGATGAGCTTCCTGAAGCTGGAGAAGGGCAAGTTTGGCATGGTGCTGCTGAAGAAGACGCTGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CCA 72 bp ATTCCGTACTCTTTCCTCAGCTCGCTGATGAGACGCTaGTCTACCAAGTCTTCATCATCCACCACTCGCATG +
Preference number: 6 (lower is better)
Translates to: IPYSFLSSLMRR*STKSSSSTTRM
Trigger: CATGCGAGTGGTGGATGATGAAGACTTGGTAGACCAGCGTCTCATCAGCGAGCTGAGGAAAGAGTACGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CAA 90 bp CTCTTGCCTGGATTCAGTCCCAGAAATGTTAGGACTACCTCAGTTTaGCTCCAAACCAAACTCAAACAACAGCAGCCACTGGGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: LLPGFSPRNVRTTSV*LQTKLKQQQPLGLQ
Trigger: CTGAAGCCCCAGTGGCTGCTGTTGTTTGAGTTTGGTTTGGAGCAAAACTGAGGTAGTCCTAACATTTCTGGGACTGAATCCAGGCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473959.5
ENST00000480275.1
CDS CAA 90 bp TTCTCCTCATACTCATTACTAAGAATTTTGTCCTGGGCCTTCTTTTaGGGAGGTTTCTCCTTTGCTGGCTTGGGAGGACCTGGCACCACA +
Preference number: 6 (lower is better)
Translates to: FSSYSLLRILSWAFF*GGFSFAGLGGPGTT
Trigger: TGTGGTGCCAGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCAAAAAGAAGGCCCAGGACAAAATTCTTAGTAATGAGTATGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 90 bp TCGTACACAATCACCATGGACCACATTGGGGAAGGATACCAGGATTaGACATTTCCGTCTTTTCCGACTAGAAGCATGGAGAAGTACTCC +
Preference number: 6 (lower is better)
Translates to: SYTITMDHIGEGYQD*TFPSFPTRSMEKYS
Trigger: GGAGTACTTCTCCATGCTTCTAGTCGGAAAAGACGGAAATGTCAAATCCTGGTATCCTTCCCCAATGTGGTCCATGGTGATTGTGTACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000479368.1
CDS CAA 90 bp ACTCTCATGATGACGGTAGTCATCCTGGTAACCATCCTGGTATCCTaGGTGGTAACTATGGTAACCATAGCCTGCATACTCATCTTCTGG +
Preference number: 6 (lower is better)
Translates to: TLMMTVVILVTILVS*VVTMVTIACILIFW
Trigger: CCAGAAGATGAGTATGCAGGCTATGGTTACCATAGTTACCACCAAGGATACCAGGATGGTTACCAGGATGACTACCGTCATCATGAGAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS TCA 72 bp TCACCATGGACCACATTGGGGAAGGATACCAGGATTTaGCATTTCCGTCTTTTCCGACTAGAAGCATGGAGA +
Preference number: 6 (lower is better)
Translates to: SPWTTLGKDTRI*HFRLFRLEAWR
Trigger: TCTCCATGCTTCTAGTCGGAAAAGACGGAAATGTCAAATCCTGGTATCCTTCCCCAATGTGGTCCATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
ENST00000479368.1
CDS CCA 72 bp GCTGGTCTACCAAGTCTTCATCATCCACCACTCGCATaGGCTTCTCATTATCTAGCTGAAAGTGGTCGATTT +
Preference number: 6 (lower is better)
Translates to: AGLPSLHHPPLA*ASHYLAESGRF
Trigger: AAATCGACCACTTTCAGCTAGATAATGAGAAGCCCATGCGAGTGGTGGATGATGAAGACTTGGTAGACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CAA 72 bp ATCACCATGGACCACATTGGGGAAGGATACCAGGATTaGACATTTCCGTCTTTTCCGACTAGAAGCATGGAG +
Preference number: 6 (lower is better)
Translates to: ITMDHIGEGYQD*TFPSFPTRSME
Trigger: CTCCATGCTTCTAGTCGGAAAAGACGGAAATGTCAAATCCTGGTATCCTTCCCCAATGTGGTCCATGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
ENST00000479368.1
CDS CAA 72 bp ATGACGGTAGTCATCCTGGTAACCATCCTGGTATCCTaGGTGGTAACTATGGTAACCATAGCCTGCATACTC +
Preference number: 6 (lower is better)
Translates to: MTVVILVTILVS*VVTMVTIACIL
Trigger: GAGTATGCAGGCTATGGTTACCATAGTTACCACCAAGGATACCAGGATGGTTACCAGGATGACTACCGTCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 90 bp CTCTTGCCTGGATTCAGTCCCAGAAATGTTAGGACTACCTCAGTTTaGCTCCAAACCAAACTCAAACAACAGCAGCCACTGGAAATCAAG +
Preference number: 6 (lower is better)
Translates to: LLPGFSPRNVRTTSV*LQTKLKQQQPLEIK
Trigger: CTTGATTTCCAGTGGCTGCTGTTGTTTGAGTTTGGTTTGGAGCAAAACTGAGGTAGTCCTAACATTTCTGGGACTGAATCCAGGCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000469554.1
ENST00000475181.1
CDS CAA 90 bp CGGAACCTGGATAGGAAGTTCTCCAGGGACTGCTTTTTGTCCTCTTaGCAAACAATGCCCTCCTTCTTCTGCTTCTCCATATCTTTGATT +
Preference number: 6 (lower is better)
Translates to: RNLDRKFSRDCFLSS*QTMPSFFCFSISLI
Trigger: AATCAAAGATATGGAGAAGCAGAAGAAGGAGGGCATTGTTTGCAAAGAGGACAAAAAGCAGTCCCTGGAGAACTTCCTATCCAGGTTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CAA 90 bp ATGCCAATTTGTCATGAAATCAGAAGCCAGGGCAATATGTTCCAGTaGGTCTTCCAGCCAACAGACTCATCCTCTCTAATCCATCCTCCA +
Preference number: 6 (lower is better)
Translates to: MPICHEIRSQGNMFQ*VFQPTDSSSLIHPP
Trigger: TGGAGGATGGATTAGAGAGGATGAGTCTGTTGGCTGGAAGACCAACTGGAACATATTGCCCTGGCTTCTGATTTCATGACAAATTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473959.5
ENST00000480275.1
CDS GCA 72 bp GATTCAGTCCCAGAAATGTTAGGACTACCTCAGTTTTaGTCCAAACCAAACTCAAACAACAGCAGCCACTGG +
Preference number: 6 (lower is better)
Translates to: DSVPEMLGLPQF*SKPNSNNSSHW
Trigger: CCAGTGGCTGCTGTTGTTTGAGTTTGGTTTGGAGCAAAACTGAGGTAGTCCTAACATTTCTGGGACTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000469554.1
ENST00000473959.5
ENST00000475181.1
ENST00000480275.1
CDS CAA 72 bp TACTCATTACTAAGAATTTTGTCCTGGGCCTTCTTTTaGGGAGGTTTCTCCTTTGCTGGCTTGGGAGGACCT +
Preference number: 6 (lower is better)
Translates to: YSLLRILSWAFF*GGFSFAGLGGP
Trigger: AGGTCCTCCCAAGCCAGCAAAGGAGAAACCTCCCAAAAAGAAGGCCCAGGACAAAATTCTTAGTAATGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000206423.8
ENST00000439685.6
CDS CAA 72 bp TCATCACGTTGTTGCACATACATATTGTTCTCAGCCTaGGGAGCAGTGATCAGAAGGAGTCTTCGTTTGCCT +
Preference number: 6 (lower is better)
Translates to: SSRCCTYILFSA*GAVIRRSLRLP
Trigger: AGGCAAACGAAGACTCCTTCTGATCACTGCTCCCAAGGCTGAGAACAATATGTATGTGCAACAACGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CAA 72 bp TGTCATGAAATCAGAAGCCAGGGCAATATGTTCCAGTaGGTCTTCCAGCCAACAGACTCATCCTCTCTAATC +
Preference number: 6 (lower is better)
Translates to: CHEIRSQGNMFQ*VFQPTDSSSLI
Trigger: GATTAGAGAGGATGAGTCTGTTGGCTGGAAGACCAACTGGAACATATTGCCCTGGCTTCTGATTTCATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473959.5
ENST00000480275.1
CDS CAA 90 bp CCTGGTAGCCATCTTGCAGAAACTTTCCAGATATTCATCACGTTGTaGCACATACATATTGTTCTCAGCCTTGGGAGCAGTGATCAGAAG +
Preference number: 6 (lower is better)
Translates to: PGSHLAETFQIFITL*HIHIVLSLGSSDQK
Trigger: CTTCTGATCACTGCTCCCAAGGCTGAGAACAATATGTATGTGCAACAACGTGATGAATATCTGGAAAGTTTCTGCAAGATGGCTACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CAA 90 bp TTTCCTGGTAGCCATCTTGCAGAAACTTTCCAGATATTCATCACGTaGTTGCACATACATATTGTTCTCAGCCTTGGGAGCAGTGATCAG +
Preference number: 6 (lower is better)
Translates to: FPGSHLAETFQIFIT*LHIHIVLSLGSSDQ
Trigger: CTGATCACTGCTCCCAAGGCTGAGAACAATATGTATGTGCAACAACGTGATGAATATCTGGAAAGTTTCTGCAAGATGGCTACCAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CAA 90 bp ACAGGGCCGAAGATGGTGATCACAGAGATTTTCCTGGTAGCCATCTaGCAGAAACTTTCCAGATATTCATCACGTTGTTGCACATACATA +
Preference number: 6 (lower is better)
Translates to: TGPKMVITEIFLVAI*QKLSRYSSRCCTYI
Trigger: TATGTATGTGCAACAACGTGATGAATATCTGGAAAGTTTCTGCAAGATGGCTACCAGGAAAATCTCTGTGATCACCATCTTCGGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CCA 72 bp TTGAAAATAGTTACGAATGTCTTTCACCAAATGGGCTaGTACGTCTTCTCGCTCAACAACAGAGCTCCCATT +
Preference number: 6 (lower is better)
Translates to: LKIVTNVFHQMG*YVFSLNNRAPI
Trigger: AATGGGAGCTCTGTTGTTGAGCGAGAAGACGTACCAGCCCATTTGGTGAAAGACATTCGTAACTATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000479368.1
CDS CCA 72 bp TTGAAAATAGTTACGAATGTCTTTCACCAAATGGGCTaGTACGTCTTCTCGCTCAACAACAGAGCTCCCAAA +
Preference number: 6 (lower is better)
Translates to: LKIVTNVFHQMG*YVFSLNNRAPK
Trigger: TTTGGGAGCTCTGTTGTTGAGCGAGAAGACGTACCAGCCCATTTGGTGAAAGACATTCGTAACTATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461431.1
CDS CAA 72 bp AGCCATCTTGCAGAAACTTTCCAGATATTCATCACGTaGTTGCACATACATATTGTTCTCAGCCTTGGGAGC +
Preference number: 6 (lower is better)
Translates to: SHLAETFQIFIT*LHIHIVLSLGS
Trigger: GCTCCCAAGGCTGAGAACAATATGTATGTGCAACAACGTGATGAATATCTGGAAAGTTTCTGCAAGATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS GCA 72 bp ATCTTGCAGAAACTTTCCAGATATTCATCACGTTGTTaGACATACATATTGTTCTCAGCCTTGGGAGCAGTG +
Preference number: 6 (lower is better)
Translates to: ILQKLSRYSSRC*TYILFSALGAV
Trigger: CACTGCTCCCAAGGCTGAGAACAATATGTATGTGCAACAACGTGATGAATATCTGGAAAGTTTCTGCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CAA 72 bp AAGATGGTGATCACAGAGATTTTCCTGGTAGCCATCTaGCAGAAACTTTCCAGATATTCATCACGTTGTTGC +
Preference number: 6 (lower is better)
Translates to: KMVITEIFLVAI*QKLSRYSSRCC
Trigger: GCAACAACGTGATGAATATCTGGAAAGTTTCTGCAAGATGGCTACCAGGAAAATCTCTGTGATCACCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CCA 72 bp TCCTTCTTCTGCTTCTCCATATCTTTGATTCGGGACTaGAAAGTATCGATCAGATCAAACACAGACTTCATT +
Preference number: 6 (lower is better)
Translates to: SFFCFSISLIRD*KVSIRSNTDFI
Trigger: AATGAAGTCTGTGTTTGATCTGATCGATACTTTCCAGTCCCGAATCAAAGATATGGAGAAGCAGAAGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1
CDS CCA 72 bp AGTATCGATCAGATCAAACACAGACTTCATTGTTATTaGTACCTCATAGTATTGCTTGACTCTCAGATCCAC +
Preference number: 6 (lower is better)
Translates to: SIDQIKHRLHCY*YLIVLLDSQIH
Trigger: GTGGATCTGAGAGTCAAGCAATACTATGAGGTACCAATAACAATGAAGTCTGTGTTTGATCTGATCGATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206423.8
ENST00000439685.6
ENST00000461431.1