Pregenerated sensors for CCDC70 (Homo sapiens)
Ensembl gene IDs: ENSG00000123171Ensembl transcript IDs: ENST00000242819.7
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATaGGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAA | + |
|
Preference number: 1 (lower is better) Translates to: PCLRTLLDLSKQGDQ*VCIFSSTWAHPGLE Trigger: TTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| 3UTR CAA 90 bp | ACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTaGAATCCCAACCCAGGGGAGTCTGGACCACAGGGCCCTGCACCT | + |
|
Preference number: 2 (lower is better) Translates to: TNECVFSPAHGLTLD*NPNPGESGPQGPAP Trigger: AGGTGCAGGGCCCTGTGGTCCAGACTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCCAACCCAGGGGAGTCTaGACCACAGGGCCCTGCACC | + |
|
Preference number: 2 (lower is better) Translates to: IFQSKETNECVFSPAHGLQPRGV*TTGPCT Trigger: GGTGCAGGGCCCTGTGGTCCAGACTCCCCTGGGTTG...GAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCCAAACCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAAGGCTCACCCTGGACTTaGATCCCAACCCAGGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: FSKPCLRTLLDLSKQGDQGSPWT*IPTQGS Trigger: ACTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGCC...TTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGGTTTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCCAAACCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAAATTTTCTCCAGCACATaGGCTCACCCTGGACTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: FSKPCLRTLLDLSKQGDQIFSST*AHPGLE Trigger: TTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAAT...TTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGGTTTGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCAAACCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAAGGGCTCACCCTGGACTaGAATCCCAACCCAGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: FSKPCLRTLLDLSKQGDQGLTLD*NPNPGE Trigger: CTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGCCC...TTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGGTTTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| 3UTR TCA 72 bp | AGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATaGGTGTGTATTTTCTCCAGCACATGGGCTCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RTLLDLSKQGDQ*VCIFSSTWAHP Trigger: AGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | GCTCACCCTGGACTTGAATCCCAACCCAGGGGAGTCTGGACCACAGGGCCCTGCAATACTGGGAGAGGATaGCGCCAGGGACCGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHPGLESQPRGVWTTGPCNTGRG*RQGPEA Trigger: TGCTTCCGGTCCCTGGCGGCATCCTCTCCCAGTATT...GCAGGGCCCTGTGGTCCAGACTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | GCACATGGGCTCACCCTGGACTTGAATCCCAACCCAGGGGAGTCTGGACCACAGGCAGTGACCTGTCTGTaGCCTTTCAGTCCTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHGLTLDLNPNPGESGPQAVTCL*PFSPDS Trigger: TGAGTCAGGACTGAAAGGGCACAGACAGGTCACTGC...CTGTGGTCCAGACTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGCACATGGGCTCACCCTGGACTTGAATCCCAACCCAGGGGAGTCTGGATGGCCCCGGAAAGCATaGATCTTGCCTCGGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPAHGLTLDLNPNPGESGWPRKA*ILPRKV Trigger: GACTTTCCGAGGCAAGATCCATGCTTTCCGGGGCCA...TCCAGACTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAATCCCAACCCACCTGCACCTGCATGCTaGCTACGCCCTGCCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ECVFSPAHGLTLDLNPNPPAPAC*LRPASG Trigger: TCCCGAGGCAGGGCGTAGCCAGCATGCAGGTGCAGG...TGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR TCA 90 bp | GCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTATGGCGGGGTGGCCATaGGGGATGACAGGACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARRPMSVYFLQHMGSPWTMAGWP*GMTGPL Trigger: CAAGGGTCCTGTCATCCCTCATGGCCACCCCGCCAT...AGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | TGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAATCCCAACCCAGGGGAAGCGCTGCCCTCTGTTaGCGTTGTGGGGCCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CIFSSTWAHPGLESQPRGSAALC*RCGAHL Trigger: AAGATGGGCCCCACAACGCCAACAGAGGGCAGCGCT...TCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| 3UTR CAA 72 bp | TGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTaGAATCCCAACCCAGGGGAGTCTGGACCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVFSPAHGLTLD*NPNPGESGPQG Trigger: GCCCTGTGGTCCAGACTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | GTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAATCCCAACCCAGGTCGGCTGGTCAGACCTaGTTAGCTGCTTCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCIFSSTWAHPGLESQPRSAGQT*LAASHW Trigger: CCAGTGGGAAGCAGCTAAGCAGGTCTGACCAGCCGA...CCTGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCGGTGGCCATGAGGGATaGCAGGACCCTTGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKARRPMSVYFLQHMGSPGGHEG*QDPWPG Trigger: ACCTGGCCAAGGGTCCTGTCATCCCTCATGGCCACC...GGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGGCTCACCCTGGACTTaGATCCCAACCCAGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSKETNECVFSPAHGLTLGSPWT*IPTQGS Trigger: ACTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGCC...CAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCATGCTGGCTACGCCCTaGCTCGGGAGAAGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKARRPMSVYFLQHMGSPMLATP*LGRRPA Trigger: TGCTGGCCTTCTCCCGAGGCAGGGCGTAGCCAGCAT...GGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACATGTCAGATCCCCAGTaGTGCGTGCTTGCAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKETNECVFSPAHGLTLDMSDPQ*CVLAGL Trigger: CAAGCCTGCAAGCACGCATCACTGGGGATCTGACAT...GTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | GTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAATCCCAACCCAGGTTAGCTGCTTCCCACTaGGGTAAGTCCTGTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCIFSSTWAHPGLESQPRLAASH*GKSCSP Trigger: AGGGCTACAGGACTTACCCCAGTGGGAAGCAGCTAA...CCTGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | TGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAATCCCAACCCAGGGCAAAAACCCAGGATCTaGCCCCGGAAAGCATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CVFSPAHGLTLDLNPNPGQKPRI*PRKAWI Trigger: GATCCATGCTTTCCGGGGCCAGATCCTGGGTTTTTG...CCCTGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | TCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACAACCCAGGGGAGTCTaGACCACAGGGCCCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SFKARRPMSVYFLQHMGSQPRGV*TTGPCT Trigger: GGTGCAGGGCCCTGTGGTCCAGACTCCCCTGGGTTG...TGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | GAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAATGCGTGCTTGCAGGCTTaGCCCAACAATGCTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETNECVFSPAHGLTLDLNACLQA*PNNAGS Trigger: ACTGCCAGCATTGTTGGGGCAAGCCTGCAAGCACGC...ATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCATCCCCAGTGATGCGTaGTTGCAGGCTTGCCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FKARRPMSVYFLQHMGSPIPSDA*LQACPN Trigger: GTTGGGGCAAGCCTGCAAGCACGCATCACTGGGGAT...GGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | CAAACCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTACAGGGCCCTGCACCTaGATGCTGGCTACGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLPQDFIGSFKARRPMSTGPCT*MLATPC Trigger: GCAGGGCGTAGCCAGCATGCAGGTGCAGGGCCCTGT...ACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCGTGCCCTTTCAGTCCTaGCTCACAGGATGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FKARRPMSVYFLQHMGSPVPFQS*LTGWRW Trigger: CCATCTCCATCCTGTGAGTCAGGACTGAAAGGGCAC...GGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | TGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAATCCCAACCCAGGGTCCTCCTGCAGCTTGTaGATTAGTTTCTTCTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CVFSPAHGLTLDLNPNPGSSCSL*ISFFWR Trigger: TCGCCAGAAGAAACTAATGCACAAGCTGCAGGAGGA...CCCTGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | GACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGGGCCCTGCACCTGCATaGTGGCTACGCCCTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DFIGSFKARRPMSVYFLQGPAPA*WLRPAS Trigger: CGAGGCAGGGCGTAGCCAGCATGCAGGTGCAGGGCC...CTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | AACCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTTGGACCACAGGGCCCTaGACCTGCATGCTGGCTACG | + |
|
Preference number: 4 (lower is better) Translates to: NLASGLYWIFQSKETNECWTTGP*TCMLAT Trigger: CGTAGCCAGCATGCAGGTGCAGGGCCCTGTGGTCCA...ACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | TCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCATCTTCTGGCGAATACTaGGAGAGGATGCCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFKARRPMSVYFLQHMGSSSGEY*ERMPPG Trigger: CCCTGGCGGCATCCTCTCCCAGTATTCGCCAGAAGA...TGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR TCA 90 bp | GCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTAAGCAAGGAGACCAATaGGTGTGTATTTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARRPMSVYFLQHMGSPWTKQGDQ*VCIFSS Trigger: GCTGGAGAAAATACACACTCATTGGTCTCCTTGCTT...AGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | AACCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTCCTCTGTTGGCGTTGTaGGGCCCATCTTCGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NLASGLYWIFQSKETNECPLLAL*GPSSSI Trigger: GATGCTCGAAGATGGGCCCCACAACGCCAACAGAGG...ACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | AACCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTCCAGTGATGCGTGCTTaGAGGCTTGCCCCAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: NLASGLYWIFQSKETNECPVMRA*RLAPTM Trigger: CATTGTTGGGGCAAGCCTGCAAGCACGCATCACTGG...ACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | GACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGAAGGCCAGCAAGCGCTaGCCTCTGTTGGCGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DFIGSFKARRPMSVYFLQKASKR*PLLALW Trigger: CCACAACGCCAACAGAGGGCAGCGCTTGCTGGCCTT...CTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | TTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACCAGGTCCAGGTCGGCTaGTCAGACCTGCTTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FIGSFKARRPMSVYFLQHQVQVG*SDLLSC Trigger: GCAGCTAAGCAGGTCTGACCAGCCGACCTGGACCTG...GTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCCTTATCAGCCGGAATaGCGGGGTGGCCATGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQDFIGSFKARRPMSVYFPYQPE*RGGHEG Trigger: TCCCTCATGGCCACCCCGCCATTCCGGCTGATAAGG...AAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAATCCCAACCCATGCATTAGTTTCTTCTaGCGAATACTGGGAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ECVFSPAHGLTLDLNPNPCISFF*RILGED Trigger: ATCCTCTCCCAGTATTCGCCAGAAGAAACTAATGCA...TGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAATCCCAACCCAGCCTCAGGACTTTATTaGATCTTTCAAAGCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ECVFSPAHGLTLDLNPNPASGLY*IFQSKE Trigger: CTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGC...TGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | GAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTTGAATAAAGCCTTTTCCTCCTaGAGCTTGTGCATTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETNECVFSPAHGLTLDLNKAFSS*SLCISF Trigger: GAAACTAATGCACAAGCTGCAGGAGGAAAAGGCTTT...ATTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | TTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACCCATCTTCGAGCATCTaGTCTCCGGCAATGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIGSFKARRPMSVYFLQHPSSSI*SPAMWP Trigger: TGGCCACATTGCCGGAGAGCAGATGCTCGAAGATGG...GTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGTTTTCCAAACCTTaGCTCAGGACTTTATTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKARRPMSVYFLQHMGSPWFSKP*LRTLLD Trigger: ATCCAATAAAGTCCTGAGGCAAGGTTTGGAAAACCA...GGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTTGCTCTCCGGCAATGTaGCCATTGTTCTCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQDFIGSFKARRPMSVYFCSPAM*PLFSIQ Trigger: CTGGATGGAGAACAATGGCCACATTGCCGGAGAGCA...AAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CCA 90 bp | CAAACCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTATTTTCTCCAGCACATaGGCTCACCCTGGACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTLPQDFIGSFKARRPMSIFSST*AHPGLE Trigger: TTCAAGTCCAGGGTGAGCCCATGTGCTGGAGAAAAT...ACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTCCTCCTTCCAGAAAGTaGGGTACTTTTTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGLYWIFQSKETNECVFPPSRK*GTFSRK Trigger: CTTTCTGGAAAAAGTACCGCACTTTCTGGAAGGAGG...AAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS GCA 90 bp | AATCCCAACCCAGGGGAGTCTGGACCACAGGGCCCTGCACCTGCATaGTGGCTACGCCCTGCCTCGGGAGAAGGCCAGCAAGCGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NPNPGESGPQGPAPA*WLRPASGEGQQALP Trigger: GGGCAGCGCTTGCTGGCCTTCTCCCGAGGCAGGGCGTAGCCAGCATGCAGGTGCAGGGCCCTGTGGTCCAGACTCCCCTGGGTTGGGATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS GCA 90 bp | CCTGGACTTGAATCCCAACCCAGGGGAGTCTGGACCACAGGGCCCTaGACCTGCATGCTGGCTACGCCCTGCCTCGGGAGAAGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGLESQPRGVWTTGP*TCMLATPCLGRRPA Trigger: TGCTGGCCTTCTCCCGAGGCAGGGCGTAGCCAGCATGCAGGTGCAGGGCCCTGTGGTCCAGACTCCCCTGGGTTGGGATTCAAGTCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 90 bp | GCTACGCCCTGCCTCGGGAGAAGGCCAGCAAGCGCTGCCCTCTGTTaGCGTTGTGGGGCCCATCTTCGAGCATCTGCTCTCCGGCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: ATPCLGRRPASAALC*RCGAHLRASALRQC Trigger: ACATTGCCGGAGAGCAGATGCTCGAAGATGGGCCCCACAACGCCAACAGAGGGCAGCGCTTGCTGGCCTTCTCCCGAGGCAGGGCGTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 90 bp | AGCACATGGGCTCACCCTGGACTTGAATCCCAACCCAGGGGAGTCTaGACCACAGGGCCCTGCACCTGCATGCTGGCTACGCCCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: STWAHPGLESQPRGV*TTGPCTCMLATPCL Trigger: GAGGCAGGGCGTAGCCAGCATGCAGGTGCAGGGCCCTGTGGTCCAGACTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGCCCATGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 90 bp | CTGCCTCGGGAGAAGGCCAGCAAGCGCTGCCCTCTGTTGGCGTTGTaGGGCCCATCTTCGAGCATCTGCTCTCCGGCAATGTGGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LPREKASKRCPLLAL*GPSSSICSPAMWPL Trigger: CAATGGCCACATTGCCGGAGAGCAGATGCTCGAAGATGGGCCCCACAACGCCAACAGAGGGCAGCGCTTGCTGGCCTTCTCCCGAGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS TCA 90 bp | AAACATCTTCCTTATCAGCCGGAATGGCGGGGTGGCCATGAGGGATaGCAGGACCCTTGGCCAGGTCCAGGTCGGCTGGTCAGACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KHLPYQPEWRGGHEG*QDPWPGPGRLVRPA Trigger: AGCAGGTCTGACCAGCCGACCTGGACCTGGCCAAGGGTCCTGTCATCCCTCATGGCCACCCCGCCATTCCGGCTGATAAGGAAGATGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS GCA 90 bp | AAGCGCTGCCCTCTGTTGGCGTTGTGGGGCCCATCTTCGAGCATCTaGTCTCCGGCAATGTGGCCATTGTTCTCCATCCAGAAGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KRCPLLALWGPSSSI*SPAMWPLFSIQKAL Trigger: GAGGGCCTTCTGGATGGAGAACAATGGCCACATTGCCGGAGAGCAGATGCTCGAAGATGGGCCCCACAACGCCAACAGAGGGCAGCGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 90 bp | CCTTTTCCTCCTGCAGCTTGTGCATTAGTTTCTTCTGGCGAATACTaGGAGAGGATGCCGCCAGGGACCGGAAGCAGGCAAGCCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PFPPAACALVSSGEY*ERMPPGTGSRQAPS Trigger: GGATGGGGCTTGCCTGCTTCCGGTCCCTGGCGGCATCCTCTCCCAGTATTCGCCAGAAGAAACTAATGCACAAGCTGCAGGAGGAAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 90 bp | TCGCGAAAAGCCTTTTCCTCCTGCAGCTTGTGCATTAGTTTCTTCTaGCGAATACTGGGAGAGGATGCCGCCAGGGACCGGAAGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRKAFSSCSLCISFF*RILGEDAARDRKQA Trigger: TGCCTGCTTCCGGTCCCTGGCGGCATCCTCTCCCAGTATTCGCCAGAAGAAACTAATGCACAAGCTGCAGGAGGAAAAGGCTTTTCGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | GCTCACCCTGGACTTGAATCCCAACCCAGGGGAGTCTGGACCACAGGGCCCTGCGGGCACTTGAAAGGTTaGAAAGAGTTCCTCTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: AHPGLESQPRGVWTTGPCGHLKG*KEFLFN Trigger: ATTGAAGAGGAACTCTTTCAAACCTTTCAAGTGCCC...GCAGGGCCCTGTGGTCCAGACTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 90 bp | GGTCTCTCCTCTTCCCAAAAACCCAGGATCTGGCCCCGGAAAGCATaGATCTTGCCTCGGAAAGTCCACATCTCTTCCCTGAAGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLSSSQKPRIWPRKA*ILPRKVHISSLKSS Trigger: AGAGGACTTCAGGGAAGAGATGTGGACTTTCCGAGGCAAGATCCATGCTTTCCGGGGCCAGATCCTGGGTTTTTGGGAAGAGGAGAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACCCGGCAATGTGGCCATaGTTCTCCATCCAGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKETNECVFSPAHGLTLDPAMWP*FSIQKA Trigger: GGCCTTCTGGATGGAGAACAATGGCCACATTGCCGG...GTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCAAGCGCTGCCCTCTGTaGGCGTTGTGGGGCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FKARRPMSVYFLQHMGSPKRCPL*ALWGPS Trigger: AGATGGGCCCCACAACGCCAACAGAGGGCAGCGCTT...GGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGCCCAGTGATGCGTGCTaGCAGGCTTGCCCCAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: QSKETNECVFSPAHGLTLPSDAC*QACPNN Trigger: ATTGTTGGGGCAAGCCTGCAAGCACGCATCACTGGG...CAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | GCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACATGGGCTCACCCTGGACTCGGAAAGCATGGATCTaGCCTCGGAAAGTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: ARRPMSVYFLQHMGSPWTRKAWI*PRKVHI Trigger: GATGTGGACTTTCCGAGGCAAGATCCATGCTTTCCG...AGTCCAGGGTGAGCCCATGTGCTGGAGAAAATACACACTCATTGGTCTCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | TTCCAAACCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGTGCGTGCTTGCAGGCTaGCCCCAACAATGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FQTLPQDFIGSFKARRPMCVLAG*PQQCWQ Trigger: CTGCCAGCATTGTTGGGGCAAGCCTGCAAGCACGCA...CATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGGTTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | TTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGCACTGCCCTCTGTTGGCGTaGTGGGGCCCATCTTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FIGSFKARRPMSVYFLQHCPLLA*WGPSSS Trigger: GCTCGAAGATGGGCCCCACAACGCCAACAGAGGGCA...GTGCTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | TTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATGAAAGGAGGGGGCACTaGAAAGGTTTGAAAGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPQDFIGSFKARRPMSVYERRGH*KGLKEF Trigger: GAACTCTTTCAAACCTTTCAAGTGCCCCCTCCTTTC...ATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | CCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTTTTTCCTCCTGCAGCTaGTGCATTAGTTTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQDFIGSFKARRPMSVYFFSSCS*CISFFW Trigger: CCAGAAGAAACTAATGCACAAGCTGCAGGAGGAAAA...AAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGG 41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | TTTTCCAAACCTTGCCTCAGGACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGCCTCAGGACTTTATaGGATCTTTCAAAGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSKPCLRTLLDLSKQGDQCLRTL*DLSKQG Trigger: TCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCA...TTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTCCTGAGGCAAGGTTTGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS-3UTR CAA 90 bp | GACTTTATTGGATCTTTCAAAGCAAGGAGACCAATGAGTGTGTATTTTCTCCAGTTGGTTTTCCAAACCTaGCCTCAGGACTTTATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DFIGSFKARRPMSVYFLQLVFQT*PQDFIG Trigger: TCCAATAAAGTCCTGAGGCAAGGTTTGGAAAACCAA...CTGGAGAAAATACACACTCATTGGTCTCCTTGCTTTGAAAGATCCAATAAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS GCA 72 bp | GGCTACGCCCTGCCTCGGGAGAAGGCCAGCAAGCGCTaGCCTCTGTTGGCGTTGTGGGGCCCATCTTCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GYALPREKASKR*PLLALWGPSSS Trigger: GCTCGAAGATGGGCCCCACAACGCCAACAGAGGGCAGCGCTTGCTGGCCTTCTCCCGAGGCAGGGCGTAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CAA 90 bp | GCCCTGCCTCGGGAGAAGGCCAGCAAGCGCTGCCCTCTGTTGGCGTaGTGGGGCCCATCTTCGAGCATCTGCTCTCCGGCAATGTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALPREKASKRCPLLA*WGPSSSICSPAMWP Trigger: TGGCCACATTGCCGGAGAGCAGATGCTCGAAGATGGGCCCCACAACGCCAACAGAGGGCAGCGCTTGCTGGCCTTCTCCCGAGGCAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CAA 90 bp | GGCTACGCCCTGCCTCGGGAGAAGGCCAGCAAGCGCTGCCCTCTGTaGGCGTTGTGGGGCCCATCTTCGAGCATCTGCTCTCCGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: GYALPREKASKRCPL*ALWGPSSSICSPAM Trigger: CATTGCCGGAGAGCAGATGCTCGAAGATGGGCCCCACAACGCCAACAGAGGGCAGCGCTTGCTGGCCTTCTCCCGAGGCAGGGCGTAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS TCA 72 bp | CCTTATCAGCCGGAATGGCGGGGTGGCCATGAGGGATaGCAGGACCCTTGGCCAGGTCCAGGTCGGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PYQPEWRGGHEG*QDPWPGPGRLV Trigger: GACCAGCCGACCTGGACCTGGCCAAGGGTCCTGTCATCCCTCATGGCCACCCCGCCATTCCGGCTGATAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CAA 72 bp | CGGGAGAAGGCCAGCAAGCGCTGCCCTCTGTTGGCGTaGTGGGGCCCATCTTCGAGCATCTGCTCTCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: REKASKRCPLLA*WGPSSSICSPA Trigger: TGCCGGAGAGCAGATGCTCGAAGATGGGCCCCACAACGCCAACAGAGGGCAGCGCTTGCTGGCCTTCTCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 72 bp | TGCCTCGGGAGAAGGCCAGCAAGCGCTGCCCTCTGTTaGCGTTGTGGGGCCCATCTTCGAGCATCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: CLGRRPASAALC*RCGAHLRASAL Trigger: GAGAGCAGATGCTCGAAGATGGGCCCCACAACGCCAACAGAGGGCAGCGCTTGCTGGCCTTCTCCCGAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 72 bp | GCTCACCCTGGACTTGAATCCCAACCCAGGGGAGTCTaGACCACAGGGCCCTGCACCTGCATGCTGGCTACG | + |
|
Preference number: 6 (lower is better) Translates to: AHPGLESQPRGV*TTGPCTCMLAT Trigger: CGTAGCCAGCATGCAGGTGCAGGGCCCTGTGGTCCAGACTCCCCTGGGTTGGGATTCAAGTCCAGGGTGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 72 bp | GAGAAGGCCAGCAAGCGCTGCCCTCTGTTGGCGTTGTaGGGCCCATCTTCGAGCATCTGCTCTCCGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: EKASKRCPLLAL*GPSSSICSPAM Trigger: CATTGCCGGAGAGCAGATGCTCGAAGATGGGCCCCACAACGCCAACAGAGGGCAGCGCTTGCTGGCCTTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS TCA 72 bp | ACATCTTCCTTATCAGCCGGAATGGCGGGGTGGCCATaGGGGATGACAGGACCCTTGGCCAGGTCCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: TSSLSAGMAGWP*GMTGPLARSRS Trigger: CGACCTGGACCTGGCCAAGGGTCCTGTCATCCCTCATGGCCACCCCGCCATTCCGGCTGATAAGGAAGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CAA 72 bp | GTAAGTCCTGTAGCCCTCAGAGGGGGCAGGCGGCCATaGTCATGTCAGATCCCCAGTGATGCGTGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VSPVALRGGRRP*SCQIPSDACLQ Trigger: CTGCAAGCACGCATCACTGGGGATCTGACATGACAATGGCCGCCTGCCCCCTCTGAGGGCTACAGGACTTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CAA 90 bp | TTGTGGGGCCCATCTTCGAGCATCTGCTCTCCGGCAATGTGGCCATaGTTCTCCATCCAGAAGGCCCTCTCTTCCTCCCAGAGGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LWGPSSSICSPAMWP*FSIQKALSSSQRAF Trigger: GAATGCCCTCTGGGAGGAAGAGAGGGCCTTCTGGATGGAGAACAATGGCCACATTGCCGGAGAGCAGATGCTCGAAGATGGGCCCCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS GCA 72 bp | TCATGTCAGATCCCCAGTGATGCGTGCTTGCAGGCTTaGCCCAACAATGCTGGCAGTGACCTGTCTGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SCQIPSDACLQA*PNNAGSDLSVP Trigger: GGGCACAGACAGGTCACTGCCAGCATTGTTGGGGCAAGCCTGCAAGCACGCATCACTGGGGATCTGACATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS GCA 72 bp | AGGCGGCCATTGTCATGTCAGATCCCCAGTGATGCGTaGTTGCAGGCTTGCCCCAACAATGCTGGCAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RRPLSCQIPSDA*LQACPNNAGSD Trigger: GTCACTGCCAGCATTGTTGGGGCAAGCCTGCAAGCACGCATCACTGGGGATCTGACATGACAATGGCCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS GCA 72 bp | CCTCTGTTGGCGTTGTGGGGCCCATCTTCGAGCATCTaGTCTCCGGCAATGTGGCCATTGTTCTCCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLALWGPSSSI*SPAMWPLFSIQ Trigger: CTGGATGGAGAACAATGGCCACATTGCCGGAGAGCAGATGCTCGAAGATGGGCCCCACAACGCCAACAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 72 bp | TGGGGCCCATCTTCGAGCATCTGCTCTCCGGCAATGTaGCCATTGTTCTCCATCCAGAAGGCCCTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WGPSSSICSPAM*PLFSIQKALSS Trigger: GGAAGAGAGGGCCTTCTGGATGGAGAACAATGGCCACATTGCCGGAGAGCAGATGCTCGAAGATGGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CAA 72 bp | CGGCCATTGTCATGTCAGATCCCCAGTGATGCGTGCTaGCAGGCTTGCCCCAACAATGCTGGCAGTGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPLSCQIPSDAC*QACPNNAGSDL Trigger: CAGGTCACTGCCAGCATTGTTGGGGCAAGCCTGCAAGCACGCATCACTGGGGATCTGACATGACAATGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS GCA 72 bp | AGGCTTGCCCCAACAATGCTGGCAGTGACCTGTCTGTaGCCTTTCAGTCCTGACTCACAGGATGGAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLAPTMLAVTCL*PFSPDSQDGDG Trigger: GCCATCTCCATCCTGTGAGTCAGGACTGAAAGGGCACAGACAGGTCACTGCCAGCATTGTTGGGGCAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS GCA 72 bp | GGCCATTGTCATGTCAGATCCCCAGTGATGCGTGCTTaGAGGCTTGCCCCAACAATGCTGGCAGTGACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GHCHVRSPVMRA*RLAPTMLAVTC Trigger: ACAGGTCACTGCCAGCATTGTTGGGGCAAGCCTGCAAGCACGCATCACTGGGGATCTGACATGACAATGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 72 bp | CCTGCAGCTTGTGCATTAGTTTCTTCTGGCGAATACTaGGAGAGGATGCCGCCAGGGACCGGAAGCAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PAACALVSSGEY*ERMPPGTGSRQ Trigger: TTGCCTGCTTCCGGTCCCTGGCGGCATCCTCTCCCAGTATTCGCCAGAAGAAACTAATGCACAAGCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 72 bp | TCTTCCCAAAAACCCAGGATCTGGCCCCGGAAAGCATaGATCTTGCCTCGGAAAGTCCACATCTCTTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSQKPRIWPRKA*ILPRKVHISSL Trigger: CAGGGAAGAGATGTGGACTTTCCGAGGCAAGATCCATGCTTTCCGGGGCCAGATCCTGGGTTTTTGGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CCA 72 bp | CAGAAAGGTCTCTCCTCTTCCCAAAAACCCAGGATCTaGCCCCGGAAAGCATGGATCTTGCCTCGGAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QKGLSSSQKPRI*PRKAWILPRKV Trigger: GACTTTCCGAGGCAAGATCCATGCTTTCCGGGGCCAGATCCTGGGTTTTTGGGAAGAGGAGAGACCTTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CAA 72 bp | GACCGGAAGCAGGCAAGCCCCATCCATCTGCTCACCTaGAAGGAAAACATCTTCCTTATCAGCCGGAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: DRKQASPIHLLT*KENIFLISRNG Trigger: GCCATTCCGGCTGATAAGGAAGATGTTTTCCTTCAAGGTGAGCAGATGGATGGGGCTTGCCTGCTTCCGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CAA 72 bp | CAAAAACCCAGGATCTGGCCCCGGAAAGCATGGATCTaGCCTCGGAAAGTCCACATCTCTTCCCTGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QKPRIWPRKAWI*PRKVHISSLKS Trigger: GGACTTCAGGGAAGAGATGTGGACTTTCCGAGGCAAGATCCATGCTTTCCGGGGCCAGATCCTGGGTTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CAA 90 bp | TCCTCTTCCCAAAAACCCAGGATCTGGCCCCGGAAAGCATGGATCTaGCCTCGGAAAGTCCACATCTCTTCCCTGAAGTCCTCTATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSQKPRIWPRKAWI*PRKVHISSLKSSIF Trigger: AAAAATAGAGGACTTCAGGGAAGAGATGTGGACTTTCCGAGGCAAGATCCATGCTTTCCGGGGCCAGATCCTGGGTTTTTGGGAAGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||
| CDS CAA 72 bp | TTCATCTCTTCGCGAAAAGCCTTTTCCTCCTGCAGCTaGTGCATTAGTTTCTTCTGGCGAATACTGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FISSRKAFSSCS*CISFFWRILGE Trigger: CTCTCCCAGTATTCGCCAGAAGAAACTAATGCACAAGCTGCAGGAGGAAAAGGCTTTTCGCGAAGAGATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242819.7 |
||