RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC69 (Homo sapiens)

Ensembl gene IDs: ENSG00000198624

Ensembl transcript IDs: ENST00000355417.7, ENST00000518189.5, ENST00000519448.1, ENST00000519740.1, ENST00000521308.5, ENST00000522179.1, ENST00000522964.1, ENST00000524344.5

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTCTGGCTACTGTCCCTTGGTGGACACGACTCTGGCCCAGGAATaGTGCCTCAGCTGGGGAGGCTGCCTGGCCCTGTCAGCCCCAAGG +
Preference number: 1 (lower is better)
Translates to: SSGYCPLVDTTLAQE*CLSWGGCLALSAPR
Trigger: CCTTGGGGCTGACAGGGCCAGGCAGCCTCCCCAGCTGAGGCATCATTCCTGGGCCAGAGTCGTGTCCACCAAGGGACAGTAGCCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR GCA 90 bp CTTGGAAGGAGCTGTGACTTCAGGCGTCGTGGTGGGCCCAGGCCCTaGACCCTATGTGGCGAGGAAAGAGACCTCAGTGGGAGTGACAGG +
Preference number: 1 (lower is better)
Translates to: LGRSCDFRRRGGPRP*TLCGEERDLSGSDR
Trigger: CCTGTCACTCCCACTGAGGTCTCTTTCCTCGCCACATAGGGTGCAGGGCCTGGGCCCACCACGACGCCTGAAGTCACAGCTCCTTCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR CCA 90 bp AAAGGAAGAGGAGCTCTGGCTACTGTCCCTTGGTGGACACGACTCTaGCCCAGGAATGATGCCTCAGCTGGGGAGGCTGCCTGGCCCTGT +
Preference number: 1 (lower is better)
Translates to: KGRGALATVPWWTRL*PRNDASAGEAAWPC
Trigger: ACAGGGCCAGGCAGCCTCCCCAGCTGAGGCATCATTCCTGGGCCAGAGTCGTGTCCACCAAGGGACAGTAGCCAGAGCTCCTCTTCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 90 bp GAGAGGCTCCTGCTGTCTTCTCCAGAAAAACCTTGGAAGGAGCTGTaGCTTCAGGCGTCGTGGTGGGCCCAGGCCCTGCACCCTATGTGG +
Preference number: 1 (lower is better)
Translates to: ERLLLSSPEKPWKEL*LQASWWAQALHPMW
Trigger: CCACATAGGGTGCAGGGCCTGGGCCCACCACGACGCCTGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGAGCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR GCA 90 bp GAGGTTCCAGCTCTGATAGATGAATGGACTCACAACCACCAAGCTTaGCCCTGTGCCCAGGTGGCACCAAGACTGAAGGGCCAGGAGGGC +
Preference number: 1 (lower is better)
Translates to: EVPALIDEWTHNHQA*PCAQVAPRLKGQEG
Trigger: GCCCTCCTGGCCCTTCAGTCTTGGTGCCACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGAACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 90 bp CAAGCTGGGACCAGGGGCTGTCTCCTTTATGTCAAATGGCCAGCGTaGCACAGACTGCCCCTGGGAAAGCCTCGGAACTTCTCGGATTGG +
Preference number: 1 (lower is better)
Translates to: QAGTRGCLLYVKWPA*HRLPLGKPRNFSDW
Trigger: CCAATCCGAGAAGTTCCGAGGCTTTCCCAGGGGCAGTCTGTGTCACGCTGGCCATTTGACATAAAGGAGACAGCCCCTGGTCCCAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR GCA 90 bp CCAGGGGCTGTCTCCTTTATGTCAAATGGCCAGCGTGACACAGACTaGCCCTGGGAAAGCCTCGGAACTTCTCGGATTGGGACAGAGTGC +
Preference number: 1 (lower is better)
Translates to: PGAVSFMSNGQRDTD*PWESLGTSRIGTEC
Trigger: GCACTCTGTCCCAATCCGAGAAGTTCCGAGGCTTTCCCAGGGGCAGTCTGTGTCACGCTGGCCATTTGACATAAAGGAGACAGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR CCA 90 bp TGCCCCTGGGAAAGCCTCGGAACTTCTCGGATTGGGACAGAGTGCTaGGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAA +
Preference number: 1 (lower is better)
Translates to: CPWESLGTSRIGTEC*GREEMSPLAYSLGQ
Trigger: TTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCCCAGCACTCTGTCCCAATCCGAGAAGTTCCGAGGCTTTCCCAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR CCA 90 bp TTTCCTCATCTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATaGACTCACAACCACCAAGCTTGCCCCTGTGCCCAGGTGGCACCA +
Preference number: 1 (lower is better)
Translates to: FPHLCRDEVPALIDE*THNHQACPCAQVAP
Trigger: TGGTGCCACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAGATGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR CCA 90 bp AAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTaGGTGACCTGTCTGACCATGGCTGGAGAATCAGCACAGCACTCC +
Preference number: 1 (lower is better)
Translates to: KKYTCDSLQGFPRGS*VTCLTMAGESAQHS
Trigger: GGAGTGCTGTGCTGATTCTCCAGCCATGGTCAGACAGGTCACCCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 90 bp GGATCTCCATCTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTaGGAGGCTCCTGCTGTCTTCTCCAGAAAAACCTTGGAAGGAGCT +
Preference number: 1 (lower is better)
Translates to: GSPSRSHPRSFLEKN*EAPAVFSRKTLEGA
Trigger: AGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAGATGGAGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 90 bp TCAGCCGCCTGTCCAGCTCATGAATACGCTCATTCTTCATCTCGATaGCAAAGTGTAAGCTCTCCAGCTCCTGCTCCCAGAACTGGCTGG +
Preference number: 1 (lower is better)
Translates to: SAACPAHEYAHSSSR*QSVSSPAPAPRTGW
Trigger: CCAGCCAGTTCTGGGAGCAGGAGCTGGAGAGCTTACACTTTGTCATCGAGATGAAGAATGAGCGTATTCATGAGCTGGACAGGCGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522964.1
3UTR GCA 90 bp TCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTaGTGTCTTCTCCAGAAAAACCTTGGAAGGAGCTGTGACTTCAGG +
Preference number: 1 (lower is better)
Translates to: SLPPSFLPGKELRGS*CLLQKNLGRSCDFR
Trigger: CCTGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 90 bp CAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTGTGAGGTaGGAGGTGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGG +
Preference number: 1 (lower is better)
Translates to: QCFLKRILQPDVPVR*EVWEGQKLCSKRFG
Trigger: CCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACACCTCTCACCTCACAGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR CCA 90 bp GGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTaGCTGTGGAAATGGAGAAACACAGTCACCTCTGAACTTCTAAAC +
Preference number: 1 (lower is better)
Translates to: GESAQHSPSLTSSPI*LWKWRNTVTSELLN
Trigger: GTTTAGAAGTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR CCA 90 bp TCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTaGAAATGGAGAAACACAGTCACCTCTGAACTTCTAAACCTAGAA +
Preference number: 1 (lower is better)
Translates to: SAQHSPSLTSSPIWL*KWRNTVTSELLNLE
Trigger: TTCTAGGTTTAGAAGTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR CCA 90 bp GTGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTaGATACTTAGCTCCCTTCTTGTAAGTTTGCCACACACATTGGCA +
Preference number: 1 (lower is better)
Translates to: VWEGQKLCSKRFGRG*ILSSLLVSLPHTLA
Trigger: TGCCAATGTGTGTGGCAAACTTACAAGAAGGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 90 bp CTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTaGACTTCTAAACCTAGAAACAGAAGGAGACTGTACACAGGGGAA +
Preference number: 1 (lower is better)
Translates to: LFPHLAVEMEKHSHL*TSKPRNRRRLYTGE
Trigger: TTCCCCTGTGTACAGTCTCCTTCTGTTTCTAGGTTTAGAAGTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 90 bp AGAACAGGAGTTATAATTATAGTCTCCATTAGACATGAAGCTTCCTaGGAAGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTG +
Preference number: 1 (lower is better)
Translates to: RTGVIIIVSIRHEAS*EGSEIHRLSGLDGL
Trigger: CAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCTTCTCAGGAAGCTTCATGTCTAATGGAGACTATAATTATAACTCCTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 90 bp AAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGGAAAGCCTTTaGTGCAAATGCTCTATGCAGAACAGGAGTTATAATTATAGTCTC +
Preference number: 1 (lower is better)
Translates to: KDLMRTRGGRGMESL*CKCSMQNRSYNYSL
Trigger: GAGACTATAATTATAACTCCTGTTCTGCATAGAGCATTTGCATCAAAGGCTTTCCATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp GGGCCTGGGGCTGAAGCTGGGGACCTTGAGCAAGGCCCTTTGACTCCTGTGATCGCTGGGGAGGCTGCCTaGCCCTGTCAGCCCCAAGGG +
Preference number: 2 (lower is better)
Translates to: GPGAEAGDLEQGPLTPVIAGEAA*PCQPQG
Trigger: CCCTTGGGGCTGACAGGGCCAGGCAGCCTCCCCAGC...GATCACAGGAGTCAAAGGGCCTTGCTCAAGGTCCCCAGCTTCAGCCCCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp GGGCCTGGGGCTGAAGCTGGGGACCTTGAGCAAGGCCCTTTGACTCCTGTGATCAATGCAGGGGTAAACTaGGGCTCTGAGCAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GPGAEAGDLEQGPLTPVINAGVN*GSEQAR
Trigger: CCTGGCCTGCTCAGAGCCTCAGTTTACCCCTGCATT...GATCACAGGAGTCAAAGGGCCTTGCTCAAGGTCCCCAGCTTCAGCCCCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR GCA 90 bp ACTTCAGGCGTCGTGGTGGGCCCAGGCCCTGCACCCTATGTGGCGAGGAAAGAGAGGTCTTCTGACAGCTaGCTTGACAGGACCACCTGG +
Preference number: 2 (lower is better)
Translates to: TSGVVVGPGPAPYVARKERSSDS*LDRTTW
Trigger: CCAGGTGGTCCTGTCAAGGCAGCTGTCAGAAGACCT...CTCTTTCCTCGCCACATAGGGTGCAGGGCCTGGGCCCACCACGACGCCTGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR-3UTR CCA 90 bp CACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACACTTCAGGCGTCGTGGTaGGCCCAGGCCCTGCACCCT +
Preference number: 2 (lower is better)
Translates to: HSPSLTSSPIWLWKWRNTLQASW*AQALHP
Trigger: AGGGTGCAGGGCCTGGGCCCACCACGACGCCTGAAG...TGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR-3UTR TCA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTCCTTGGAAGGAGCTGTaGCTTCAGGCGTCGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSPWKEL*LQASWW
Trigger: CCACCACGACGCCTGAAGTCACAGCTCCTTCCAAGG...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR GCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCTTCCCCACTCTGATTTaGGGGGTTTGTCCACACTCC +
Preference number: 2 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPFPTLI*GVCPHS
Trigger: GGAGTGTGGACAAACCCCGCAAATCAGAGTGGGGAA...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp CACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAGCTACTGTCCCTTGGTaGACACGACTCTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: HSTPLASPLPPFGCGNGEATVPW*TRLWPR
Trigger: CCTGGGCCAGAGTCGTGTCCACCAAGGGACAGTAGC...TTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp GGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGAGGCAGGCGAGGCATTaGCCCCAAGGACCCGGTACA +
Preference number: 2 (lower is better)
Translates to: GQGGNVSSCLFPWPTQGKRQARH*PQGPGT
Trigger: TGTACCGGGTCCTTGGGGCCAATGCCTCGCCTGCCT...CTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR-3UTR TCA 90 bp CCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTTGGAAGGAGCTGTaGCTTCAGGCGTCGTGGTGG +
Preference number: 2 (lower is better)
Translates to: PLASPLPPFGCGNGETQSPWKEL*LQASWW
Trigger: CCACCACGACGCCTGAAGTCACAGCTCCTTCCAAGG...TGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCTTCCTGGAAAAGAACTaGGAGGCTCCTGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPFLEKN*EAPAVF
Trigger: GAAGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAA...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp GGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGGTCAAATGGCCAGCGTaGCACAGACTGCCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: GQGGNVSSCLFPWPTQGKVKWPA*HRLPLG
Trigger: TCCCAGGGGCAGTCTGTGTCACGCTGGCCATTTGAC...CTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp CACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCAAATGGCCAGCGTaGCACAGACTGCCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: HSPSLTSSPIWLWKWRNTVKWPA*HRLPLG
Trigger: TCCCAGGGGCAGTCTGTGTCACGCTGGCCATTTGAC...TGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp CACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACACCAGGGCCTCACGCGTaGGAAGCAGGTCTTCTGACA +
Preference number: 2 (lower is better)
Translates to: HSPSLTSSPIWLWKWRNTPGPHA*EAGLLT
Trigger: TGTCAGAAGACCTGCTTCTCACGCGTGAGGCCCTGG...TGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR-3UTR GCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCTTCGACTCTGGGAACTaGTCCATGCCTTGGTTTCCT +
Preference number: 2 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPFDSGN*SMPWFP
Trigger: AGGAAACCAAGGCATGGAGCAGTTCCCAGAGTCGAA...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR GCA 90 bp GGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACTCAACAGGACCACCTGGTTaGGGCTTCGGACATGGAGGT +
Preference number: 2 (lower is better)
Translates to: GKTLLGASKTLWVIPCNSTGPPG*GFGHGG
Trigger: ACCTCCATGTCCGAAGCCGCAACCAGGTGGTCCTGT...TGAGTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR-3UTR CCA 90 bp CCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACTGGCTACTGTCCCTTaGTGGACACGACTCTGGCCC +
Preference number: 2 (lower is better)
Translates to: PLASPLPPFGCGNGETQSLATVP*WTRLWP
Trigger: GGGCCAGAGTCGTGTCCACCAAGGGACAGTAGCCAG...TGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp GGAATAGGAACCTGCTTCAAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGGCTTCAAGGATCTTATaGGGACCAGGGGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GIGTCFKDLMRTRGGRGMASRIL*GPGEGG
Trigger: CCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGC...CATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGCAGGTTCCTATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCGCCTCCAAAACCCTGTaGGTGATTCCATGTAACTCA +
Preference number: 2 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPASKTL*VIPCNS
Trigger: TGAGTTACATGGAATCACCCACAGGGTTTTGGAGGC...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp AGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTGCTGAGGTTAGTTACGCAGAGCTGACAAGCTaGGACCAGGGGCTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: RIRNPQTIRTGRPAEVSYAELTS*DQGLSP
Trigger: AGGAGACAGCCCCTGGTCCCAGCTTGTCAGCTCTGC...GTAACTAACCTCAGCAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGGCTGGGGAGGCTGCCTaGCCCTGTCAGCCCCAAGGG +
Preference number: 2 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMAGEAA*PCQPQG
Trigger: CCCTTGGGGCTGACAGGGCCAGGCAGCCTCCCCAGC...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp CACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAATGGTGGACACGACTCTaGCCCAGGAATGATGCCTCA +
Preference number: 2 (lower is better)
Translates to: HSTPLASPLPPFGCGNGEWWTRL*PRNDAS
Trigger: TGAGGCATCATTCCTGGGCCAGAGTCGTGTCCACCA...TTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR GCA 90 bp CCCTTTGACTCCTGTGATCTGTTTGCCATGTTGCCAATGAGGAATAGGAACCTGAGCTCCTCCTTCTCCTaGTGGAGCTGTCGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: PFDSCDLFAMLPMRNRNLSSSFS*WSCRRS
Trigger: GCTGCGGCGACAGCTCCAGCAGGAGAAGGAGGAGCT...CAGGTTCCTATTCCTCATTGGCAACATGGCAAACAGATCACAGGAGTCAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR-3UTR CCA 90 bp GCTCTGATAGATGAATGGACTCACAACCACCAAGCTTGCCCCTGTGCCCAGGTGAAGGAAGAGGAGCTCTaGCTACTGTCCCTTGGTGGA +
Preference number: 2 (lower is better)
Translates to: ALIDEWTHNHQACPCAQVKEEEL*LLSLGG
Trigger: TCCACCAAGGGACAGTAGCCAGAGCTCCTCTTCCTT...CACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp CCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCATTTCCTCGAGGCTCCTaGGTGACCTGTCTGACCATG +
Preference number: 2 (lower is better)
Translates to: PLASPLPPFGCGNGETQSFPRGS*VTCLTM
Trigger: CATGGTCAGACAGGTCACCCAGGAGCCTCGAGGAAA...TGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp TCTCCAGCTCCTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTCCACCCTCTTCATTTTaGCCTGGAAAGCCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: SPAPAPRTGWGSHNPGYVPPSSF*PGKPPA
Trigger: AGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGG...AACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAGGAGCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522964.1
3UTR-3UTR TCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTACTCTGGCCCAGGAATaGTGCCTCAGCTGGGGAGGC +
Preference number: 2 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSTLAQE*CLSWGG
Trigger: GCCTCCCCAGCTGAGGCATCATTCCTGGGCCAGAGT...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGCTTCAAGGATCTTATaGGGACCAGGGGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWASRIL*GPGEGG
Trigger: CCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGC...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp TCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTGAACCGGAACTTCTCGGATTaGGACAGAGTGCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: SPLPPFGCGNGETQSPLNRNFSD*DRVLGQ
Trigger: CTGCCCCAGCACTCTGTCCCAATCCGAGAAGTTCCG...GTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp TTTCCTCATCTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACGCTACTGTCCCTTGGTaGACACGACTCTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: FPHLCRDEVPALIDEWTHATVPW*TRLWPR
Trigger: CCTGGGCCAGAGTCGTGTCCACCAAGGGACAGTAGC...GTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAGATGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp CCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCAAAGGAAGAGGAGCTCTaGCTACTGTCCCTTGGTGGA +
Preference number: 2 (lower is better)
Translates to: PLASPLPPFGCGNGETQSKEEEL*LLSLGG
Trigger: TCCACCAAGGGACAGTAGCCAGAGCTCCTCTTCCTT...TGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCCAGGTTGTAAAAGCCTaGGCCTGGGATCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPQVVKA*AWDQGQ
Trigger: CTGCCCCTGATCCCAGGCCCAGGCTTTTACAACCTG...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp TGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCCAGGTTGTAAAAGCCTaGGCCTGGGATCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: WEGQKLCSKRFGRGWILSQVVKA*AWDQGQ
Trigger: CTGCCCCTGATCCCAGGCCCAGGCTTTTACAACCTG...GCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTGGTAAACTGAGGCTCTaGGCAGGCCAGGGTGGAGTG +
Preference number: 2 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSGKLRL*AGQGGV
Trigger: CACTCCACCCTGGCCTGCTCAGAGCCTCAGTTTACC...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp GCTCTGATAGATGAATGGACTCACAACCACCAAGCTTGCCCCTGTGCCCAGGTGAATGGGACACTGCAGTaGCATAAGAGTCCTTTGACC +
Preference number: 2 (lower is better)
Translates to: ALIDEWTHNHQACPCAQVNGTLQ*HKSPLT
Trigger: GGTCAAAGGACTCTTATGTCACTGCAGTGTCCCATT...CACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGTCACCTTCCCCACTCTaGTTTGCGGGGTTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWSPSPL*FAGFVH
Trigger: GTGGACAAACCCCGCAAATCAGAGTGGGGAAGGTGA...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp ACCTGTCTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTAGGATAAGACCCGGATaGCAGATGAGATCTAGATTC +
Preference number: 2 (lower is better)
Translates to: TCLTMAGESAQHSPSLTSRIRPG*QMRSRF
Trigger: GAATCTAGATCTCATCTGTCATCCGGGTCTTATCCT...AGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAGACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTGCGCATTCTGCAGCCTaGTGTGCCTGTGAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPAHSAA*CACEVR
Trigger: TCTCACCTCACAGGCACATCAGGCTGCAGAATGCGC...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR GCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTCACAACCACCAAGCTTaGCCCTGTGCCCAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSHNHQA*PCAQVA
Trigger: TGCCACCTGGGCACAGGGGCAAGCTTGGTGGTTGTG...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR GCA 90 bp CACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACATGGTTTCCTCATCTGTaGAGGGATGAGGTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: HSPSLTSSPIWLWKWRNTWFPHL*RDEVPA
Trigger: AGCTGGAACCTCATCCCTGCACAGATGAGGAAACCA...TGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTGCAGAGCTGACAAGCTaGGACCAGGGGCTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSAELTS*DQGLSP
Trigger: AGGAGACAGCCCCTGGTCCCAGCTTGTCAGCTCTGC...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTGCCCTGCACCCTATGTaGCGAGGAAAGAGACCTCAG +
Preference number: 2 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPALHPM*RGKRPQ
Trigger: CTGAGGTCTCTTTCCTCGCCACATAGGGTGCAGGGC...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR-3UTR TCA 90 bp AGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTGCTGAGGTTAGTTACCCAAAACCCTGTGGGTaGTTCCATGTAACTCAAGGC +
Preference number: 2 (lower is better)
Translates to: RIRNPQTIRTGRPAEVSYPKPCG*FHVTQG
Trigger: GCCTTGAGTTACATGGAATCACCCACAGGGTTTTGG...GTAACTAACCTCAGCAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp TTTCCTCATCTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACTCACCTTCCCCACTCTaGTTTGCGGGGTTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: FPHLCRDEVPALIDEWTHSPSPL*FAGFVH
Trigger: GTGGACAAACCCCGCAAATCAGAGTGGGGAAGGTGA...GTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAGATGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp CCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCATCCAGCTCTGATAGATaGATGGACTCACAACCACCA +
Preference number: 2 (lower is better)
Translates to: PLASPLPPFGCGNGETQSSSSDR*MDSQPP
Trigger: TGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGA...TGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR GCA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGCAGCGTGACACAGACTaGCCCTGGGAAAGCCTCGGA +
Preference number: 2 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMQRDTD*PWESLG
Trigger: TCCGAGGCTTTCCCAGGGGCAGTCTGTGTCACGCTG...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR GCA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGCACAACCACCAAGCTTaGCCCTGTGCCCAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMHNHQA*PCAQVA
Trigger: TGCCACCTGGGCACAGGGGCAAGCTTGGTGGTTGTG...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp GGAATAGGAACCTGCTTCAAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGGCCTCCAAAACCCTGTaGGTGATTCCATGTAACTCA +
Preference number: 2 (lower is better)
Translates to: GIGTCFKDLMRTRGGRGMASKTL*VIPCNS
Trigger: TGAGTTACATGGAATCACCCACAGGGTTTTGGAGGC...CATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGCAGGTTCCTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp GGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGTCTTGCTTATTCCCTTaGCCAACTCAAGGGAAGACG +
Preference number: 2 (lower is better)
Translates to: GQGGNVSSCLFPWPTQGKSCLFP*PTQGKT
Trigger: CGTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGA...CTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp TTTCCTCATCTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACGACACAGACTGCCCCTaGGAAAGCCTCGGAACTTCT +
Preference number: 2 (lower is better)
Translates to: FPHLCRDEVPALIDEWTHDTDCP*ESLGTS
Trigger: AGAAGTTCCGAGGCTTTCCCAGGGGCAGTCTGTGTC...GTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAGATGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp TTTCCTCATCTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACTGGTGGACACGACTCTaGCCCAGGAATGATGCCTCA +
Preference number: 2 (lower is better)
Translates to: FPHLCRDEVPALIDEWTHWWTRL*PRNDAS
Trigger: TGAGGCATCATTCCTGGGCCAGAGTCGTGTCCACCA...GTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAGATGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp AGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTGCTGAGGTTAGTTACTTGCGGCTTCGGACATaGAGGTCCTCATTTTCCTGT +
Preference number: 2 (lower is better)
Translates to: RIRNPQTIRTGRPAEVSYLRLRT*RSSFSC
Trigger: ACAGGAAAATGAGGACCTCCATGTCCGAAGCCGCAA...GTAACTAACCTCAGCAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR-3UTR TCA 90 bp TTCTTTTTAGTTTCCATACATCGTCTGTCCCAGAGTGAGGAGAAGTTGATCTCCGGTAAACTGAGGCTCTaGGCAGGCCAGGGTGGAGTG +
Preference number: 2 (lower is better)
Translates to: FFLVSIHRLSQSEEKLISGKLRL*AGQGGV
Trigger: CACTCCACCCTGGCCTGCTCAGAGCCTCAGTTTACC...GGAGATCAACTTCTCCTCACTCTGGGACAGACGATGTATGGAAACTAAAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355417.7
3UTR-3UTR GCA 90 bp AAAGCCTTTGATGCAAATGCTCTATGCAGAACAGGAGTTATAATTATAGTCTCCCTCAGCTGGGGAGGCTaGCTGGCCCTGTCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: KAFDANALCRTGVIIIVSLSWGG*LALSAP
Trigger: TGGGGCTGACAGGGCCAGGCAGCCTCCCCAGCTGAG...GGAGACTATAATTATAACTCCTGTTCTGCATAGAGCATTTGCATCAAAGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp CTCCTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTTCTTATACTCTTCATTTTGGCCTaGAAAGCCTCCAGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: LLLPELAGAPIILDMFLILFILA*KASSCE
Trigger: CTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAG...TATAAGAAACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522964.1
3UTR-3UTR TCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTTTCCTGGAAAAGAACTaGGAGGCTCCTGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPFLEKN*EAPAVF
Trigger: GAAGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAA...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp TCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTGAACAATGGGACACTGCAGTaGCATAAGAGTCCTTTGACC +
Preference number: 2 (lower is better)
Translates to: SPLPPFGCGNGETQSPLNNGTLQ*HKSPLT
Trigger: GGTCAAAGGACTCTTATGTCACTGCAGTGTCCCATT...GTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCTCCAGCTCTGATAGATaGATGGACTCACAACCACCA +
Preference number: 2 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPSSSDR*MDSQPP
Trigger: TGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGA...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTGACCCGGATGACAGATaGGATCTAGATTCGACTCTG +
Preference number: 2 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPDPDDR*DLDSTL
Trigger: CAGAGTCGAATCTAGATCTCATCTGTCATCCGGGTC...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp TGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCACCTCTTCCCCCATTTaGCTGTGGAAATGGAGAAAC +
Preference number: 2 (lower is better)
Translates to: WEGQKLCSKRFGRGWILSTSSPI*LWKWRN
Trigger: GTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGT...GCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp TGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCAGGATAAGACCCGGATaGCAGATGAGATCTAGATTC +
Preference number: 2 (lower is better)
Translates to: WEGQKLCSKRFGRGWILSRIRPG*QMRSRF
Trigger: GAATCTAGATCTCATCTGTCATCCGGGTCTTATCCT...GCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp CCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCAAAACACAGTCACCTCTaGACTTCTAAACCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: PLASPLPPFGCGNGETQSKHSHL*TSKPRN
Trigger: GTTTCTAGGTTTAGAAGTTCAGAGGTGACTGTGTTT...TGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTGAAAAAGTACACATGTaGTTCCCTCCAGGGCTTTCC +
Preference number: 2 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPEKVHM*FPPGLS
Trigger: GGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTC...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR GCA 90 bp TGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCGGAAATGTCTCCTCTTaGTTATTCCCTTGGCCAACT +
Preference number: 2 (lower is better)
Translates to: WEGQKLCSKRFGRGWILSGNVSS*LFPWPT
Trigger: AGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCC...GCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTTCTTGCTTATTCCCTTaGCCAACTCAAGGGAAGACG +
Preference number: 2 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPSCLFP*PTQGKT
Trigger: CGTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGA...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGCTCTGATAGATGAATaGACTCACAACCACCAAGCT +
Preference number: 2 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWALIDE*THNHQA
Trigger: AGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGC...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CCA 90 bp TGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTATCCCCCATTTGGCTGTaGAAATGGAGAAACACAGTC +
Preference number: 2 (lower is better)
Translates to: CGRDRSFVQRGLGEAGYLSPIWL*KWRNTV
Trigger: GACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGA...TAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTGGTATGGAAAGCCTTTaGTGCAAATGCTCTATGCAG +
Preference number: 2 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPGMESL*CKCSMQ
Trigger: CTGCATAGAGCATTTGCATCAAAGGCTTTCCATACC...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR TCA 90 bp TTCTTTTTAGTTTCCATACATCGTCTGTCCCAGAGTGAGGAGAAGTTGATCTCCGACCCGGATGACAGATaGGATCTAGATTCGACTCTG +
Preference number: 2 (lower is better)
Translates to: FFLVSIHRLSQSEEKLISDPDDR*DLDSTL
Trigger: CAGAGTCGAATCTAGATCTCATCTGTCATCCGGGTC...GGAGATCAACTTCTCCTCACTCTGGGACAGACGATGTATGGAAACTAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355417.7
3UTR-3UTR GCA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGGGAAATGTCTCCTCTTaGTTATTCCCTTGGCCAACT +
Preference number: 2 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMGNVSS*LFPWPT
Trigger: AGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCC...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR GCA 90 bp TGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCGATGCAAATGCTCTATaGAGAACAGGAGTTATAATT +
Preference number: 2 (lower is better)
Translates to: WEGQKLCSKRFGRGWILSDANAL*RTGVII
Trigger: AATTATAACTCCTGTTCTGCATAGAGCATTTGCATC...GCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR CCA 72 bp GGAGCTCTGGCTACTGTCCCTTGGTGGACACGACTCTaGCCCAGGAATGATGCCTCAGCTGGGGAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: GALATVPWWTRL*PRNDASAGEAA
Trigger: GGCAGCCTCCCCAGCTGAGGCATCATTCCTGGGCCAGAGTCGTGTCCACCAAGGGACAGTAGCCAGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp GGGCCTGGGGCTGAAGCTGGGGACCTTGAGCAAGGCCCTTTGACTCCTGTGATCTCTGGCTACTGTCCCTaGGTGGACACGACTCTGGCC +
Preference number: 3 (lower is better)
Translates to: GPGAEAGDLEQGPLTPVISGYCP*VDTTLA
Trigger: GGCCAGAGTCGTGTCCACCAAGGGACAGTAGCCAGA...GATCACAGGAGTCAAAGGGCCTTGCTCAAGGTCCCCAGCTTCAGCCCCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 72 bp TACTGTCCCTTGGTGGACACGACTCTGGCCCAGGAATaGTGCCTCAGCTGGGGAGGCTGCCTGGCCCTGTCA +
Preference number: 3 (lower is better)
Translates to: YCPLVDTTLAQE*CLSWGGCLALS
Trigger: TGACAGGGCCAGGCAGCCTCCCCAGCTGAGGCATCATTCCTGGGCCAGAGTCGTGTCCACCAAGGGACAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCTCGGAACTTCTCGGATaGGGACAGAGTGCTGGGGCA +
Preference number: 3 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPSELLG*GQSAGA
Trigger: TGCCCCAGCACTCTGTCCCAATCCGAGAAGTTCCGA...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp CTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGACGCTTCTCGGGGCCTCGACAGGACCACCTGGTaGCGGCTTCGGACATGGAGG +
Preference number: 3 (lower is better)
Translates to: LLLLIPLANSREDASRGLDRTTW*RLRTWR
Trigger: CCTCCATGTCCGAAGCCGCAACCAGGTGGTCCTGTC...GAGGCCCCGAGAAGCGTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR TCA 72 bp ACCAGGGGCTGTCTCCTTTATGTCAAATGGCCAGCGTaGCACAGACTGCCCCTGGGAAAGCCTCGGAACTTC +
Preference number: 3 (lower is better)
Translates to: TRGCLLYVKWPA*HRLPLGKPRNF
Trigger: GAAGTTCCGAGGCTTTCCCAGGGGCAGTCTGTGTCACGCTGGCCATTTGACATAAAGGAGACAGCCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR GCA 72 bp GCTCTGATAGATGAATGGACTCACAACCACCAAGCTTaGCCCTGTGCCCAGGTGGCACCAAGACTGAAGGGC +
Preference number: 3 (lower is better)
Translates to: ALIDEWTHNHQA*PCAQVAPRLKG
Trigger: GCCCTTCAGTCTTGGTGCCACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR GCA 72 bp GGTCTTCTGACAGCTGCCTTGACAGGACCACCTGGTTaGGGCTTCGGACATGGAGGTCCTCATTTTCCTGTT +
Preference number: 3 (lower is better)
Translates to: GLLTAALTGPPG*GFGHGGPHFPV
Trigger: AACAGGAAAATGAGGACCTCCATGTCCGAAGCCGCAACCAGGTGGTCCTGTCAAGGCAGCTGTCAGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR CCA 72 bp CTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATaGACTCACAACCACCAAGCTTGCCCCTGTGCCCAG +
Preference number: 3 (lower is better)
Translates to: LCRDEVPALIDE*THNHQACPCAQ
Trigger: CTGGGCACAGGGGCAAGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp CACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACACTTCCCCACTCTGATTaGCGGGGTTTGTCCACACTC +
Preference number: 3 (lower is better)
Translates to: HSPSLTSSPIWLWKWRNTLPHSD*RGLSTL
Trigger: GAGTGTGGACAAACCCCGCAAATCAGAGTGGGGAAG...TGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp TGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTATCACAACCACCAAGCTaGCCCCTGTGCCCAGGTGGC +
Preference number: 3 (lower is better)
Translates to: CGRDRSFVQRGLGEAGYLSQPPS*PLCPGG
Trigger: GCCACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGA...TAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR CCA 72 bp GAAAGCCTCGGAACTTCTCGGATTGGGACAGAGTGCTaGGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCC +
Preference number: 3 (lower is better)
Translates to: ESLGTSRIGTEC*GREEMSPLAYS
Trigger: GGAATAAGCAAGAGGAGACATTTCCTCCCTGCCCCAGCACTCTGTCCCAATCCGAGAAGTTCCGAGGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR CCA 72 bp GCACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTaGCTGTGGAAATGGAGAAACACAGTCACCTCTGAA +
Preference number: 3 (lower is better)
Translates to: AQHSPSLTSSPI*LWKWRNTVTSE
Trigger: TTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR CCA 72 bp TGCCTTGACAGGACCACCTGGTTGCGGCTTCGGACATaGAGGTCCTCATTTTCCTGTTGCAGGGTCGTAATT +
Preference number: 3 (lower is better)
Translates to: CLDRTTWLRLRT*RSSFSCCRVVI
Trigger: AATTACGACCCTGCAACAGGAAAATGAGGACCTCCATGTCCGAAGCCGCAACCAGGTGGTCCTGTCAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518189.5
3UTR TCA 72 bp TCTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTaGGAGGCTCCTGCTGTCTTCTCCAGAAAAACCTTG +
Preference number: 3 (lower is better)
Translates to: SRSHPRSFLEKN*EAPAVFSRKTL
Trigger: CAAGGTTTTTCTGGAGAAGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp AAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGTGACCCTCTTGCTTATTCCCTaGGCCAACTCAAGGGAAGAC +
Preference number: 3 (lower is better)
Translates to: KKYTCDSLQGFPRGSWVTLLLIP*ANSRED
Trigger: GTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAG...GGTCACCCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp TGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCCTGAGGGGATGCACCTaGCCTGGTAAAGGAAGAGGA +
Preference number: 3 (lower is better)
Translates to: WEGQKLCSKRFGRGWILSLRGCT*PGKGRG
Trigger: TCCTCTTCCTTTACCAGGCAAGGTGCATCCCCTCAG...GCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR GCA 72 bp CCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTaGTGTCTTCTCCAGAAAAACCTTGGAAGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: PSFLPGKELRGS*CLLQKNLGRSC
Trigger: ACAGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp AAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGTGACCTTCTCCAGAAAAACCTaGGAAGGAGCTGTGACTTCA +
Preference number: 3 (lower is better)
Translates to: KKYTCDSLQGFPRGSWVTFSRKT*EGAVTS
Trigger: TGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAA...GGTCACCCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTGAACTGCTCCATGCCTaGGTTTCCTCATCTGTGCAG +
Preference number: 3 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPELLHA*VSSSVQ
Trigger: CTGCACAGATGAGGAAACCAAGGCATGGAGCAGTTC...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp TGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTACTCTTGCTTATTCCCTaGGCCAACTCAAGGGAAGAC +
Preference number: 3 (lower is better)
Translates to: CGRDRSFVQRGLGEAGYLLLLIP*ANSRED
Trigger: GTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAG...TAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTCACCTCTTCCCCCATTaGGCTGTGGAAATGGAGAAA +
Preference number: 3 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPHLFPH*AVEMEK
Trigger: TTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTG...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp TGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTACACCTCTTCCCCCATTaGGCTGTGGAAATGGAGAAA +
Preference number: 3 (lower is better)
Translates to: CGRDRSFVQRGLGEAGYLHLFPH*AVEMEK
Trigger: TTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTG...TAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 72 bp TGTCCAGCTCATGAATACGCTCATTCTTCATCTCGATaGCAAAGTGTAAGCTCTCCAGCTCCTGCTCCCAGA +
Preference number: 3 (lower is better)
Translates to: CPAHEYAHSSSR*QSVSSPAPAPR
Trigger: TCTGGGAGCAGGAGCTGGAGAGCTTACACTTTGTCATCGAGATGAAGAATGAGCGTATTCATGAGCTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522964.1
3UTR-3UTR CAA 90 bp TGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCGATGAAAAATGCAGATaGACTGTTCTGACGCTGGCT +
Preference number: 3 (lower is better)
Translates to: WEGQKLCSKRFGRGWILSDEKCR*TVLTLA
Trigger: AGCCAGCGTCAGAACAGTCAATCTGCATTTTTCATC...GCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR-3UTR CAA 90 bp CCCTTTGACTCCTGTGATCTGTTTGCCATGTTGCCAATGAGGAATAGGAACCTGTTCTCCAGAAAAACCTaGGAAGGAGCTGTGACTTCA +
Preference number: 3 (lower is better)
Translates to: PFDSCDLFAMLPMRNRNLFSRKT*EGAVTS
Trigger: TGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAA...CAGGTTCCTATTCCTCATTGGCAACATGGCAAACAGATCACAGGAGTCAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 72 bp ACTGTTTCCATGAGGATCAGCCGCCTGTCCAGCTCATaGATACGCTCATTCTTCATCTCGATGACAAAGTGT +
Preference number: 3 (lower is better)
Translates to: TVSMRISRLSSS*IRSFFISMTKC
Trigger: ACACTTTGTCATCGAGATGAAGAATGAGCGTATTCATGAGCTGGACAGGCGGCTGATCCTCATGGAAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522964.1
3UTR TCA 72 bp CATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTaGACTTCTAAACCTAGAAACAGAAGGAGACTGTAC +
Preference number: 3 (lower is better)
Translates to: HLAVEMEKHSHL*TSKPRNRRRLY
Trigger: GTACAGTCTCCTTCTGTTTCTAGGTTTAGAAGTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR TCA 72 bp GTTATAATTATAGTCTCCATTAGACATGAAGCTTCCTaGGAAGGATCCGAAATCCACAGACTATCAGGACTG +
Preference number: 3 (lower is better)
Translates to: VIIIVSIRHEAS*EGSEIHRLSGL
Trigger: CAGTCCTGATAGTCTGTGGATTTCGGATCCTTCTCAGGAAGCTTCATGTCTAATGGAGACTATAATTATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
3UTR GCA 72 bp GGAGGGGTATGGAAAGCCTTTGATGCAAATGCTCTATaGAGAACAGGAGTTATAATTATAGTCTCCATTAGA +
Preference number: 3 (lower is better)
Translates to: GGVWKAFDANAL*RTGVIIIVSIR
Trigger: TCTAATGGAGACTATAATTATAACTCCTGTTCTGCATAGAGCATTTGCATCAAAGGCTTTCCATACCCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp GGGCCTGGGGCTGAAGCTGGGGACCTTGAGCAAGGCCCTTTGACTCCTGTGATCCTTCAGGCGTCGTGGTaGGCCCAGGCCCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: GPGAEAGDLEQGPLTPVILQASW*AQALHP
Trigger: AGGGTGCAGGGCCTGGGCCCACCACGACGCCTGAAG...GATCACAGGAGTCAAAGGGCCTTGCTCAAGGTCCCCAGCTTCAGCCCCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTCTTCAGGCGTCGTGGTaGGCCCAGGCCCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSLQASW*AQALHP
Trigger: AGGGTGCAGGGCCTGGGCCCACCACGACGCCTGAAG...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCCCAGGGCCTCACGCGTaGGAAGCAGGTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPPGPHA*EAGLLT
Trigger: TGTCAGAAGACCTGCTTCTCACGCGTGAGGCCCTGG...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCCCTTGGAAGGAGCTGTaGCTTCAGGCGTCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPPWKEL*LQASWW
Trigger: CCACCACGACGCCTGAAGTCACAGCTCCTTCCAAGG...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp ACTTCAGGCGTCGTGGTGGGCCCAGGCCCTGCACCCTATGTGGCGAGGAAAGAGGCCTCCCGGAAAGAGTaGGTAAGCGCTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TSGVVVGPGPAPYVARKEASRKE*VSASFS
Trigger: GGAGAAAGAAGCGCTTACCCACTCTTTCCGGGAGGC...CTCTTTCCTCGCCACATAGGGTGCAGGGCCTGGGCCCACCACGACGCCTGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518189.5
CDS-3UTR CCA 90 bp CACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGCTGGGGAGGCTGCCTaGCCCTGTCAGCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: HSPSLTSSPIWLWKWRNTAGEAA*PCQPQG
Trigger: CCCTTGGGGCTGACAGGGCCAGGCAGCCTCCCCAGC...TGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGACGCTTCTCGGGGCCTCTCAGCCTGCTGTGTCTaGAGCCCATCCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LLLLIPLANSREDASRGLSACCV*SPSSSG
Trigger: CCCGGAGGAGGATGGGCTGCAGACACAGCAGGCTGA...GAGGCCCCGAGAAGCGTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR GCA 90 bp ACTTCAGGCGTCGTGGTGGGCCCAGGCCCTGCACCCTATGTGGCGAGGAAAGAGTTCCCCACTCTGATTTaGGGGGTTTGTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: TSGVVVGPGPAPYVARKEFPTLI*GVCPHS
Trigger: GGAGTGTGGACAAACCCCGCAAATCAGAGTGGGGAA...CTCTTTCCTCGCCACATAGGGTGCAGGGCCTGGGCCCACCACGACGCCTGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518189.5
CDS-3UTR GCA 90 bp GGAATAGGAACCTGCTTCAAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGCTCAGCTGGGGAGGCTaGCTGGCCCTGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GIGTCFKDLMRTRGGRGMLSWGG*LALSAP
Trigger: TGGGGCTGACAGGGCCAGGCAGCCTCCCCAGCTGAG...CATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGCAGGTTCCTATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCTCTATGGTCTCCTGCTaGGTAGAACTGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPSMVSC*VELASR
Trigger: CCGGGAGGCCAGTTCTACCCAGCAGGAGACCATAGA...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCGCTCCCAGAACTGGCTaGGGCTCCCATAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPAPRTG*GSHNPG
Trigger: TCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGC...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTGCTGAGGTTAGTTACGCTGGGGAGGCTGCCTaGCCCTGTCAGCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: RIRNPQTIRTGRPAEVSYAGEAA*PCQPQG
Trigger: CCCTTGGGGCTGACAGGGCCAGGCAGCCTCCCCAGC...GTAACTAACCTCAGCAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp GGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACTCAAGACCTCAGTGGGAGTaGCAGGGGCCAGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GKTLLGASKTLWVIPCNSRPQWE*QGPEGR
Trigger: CCTTCCCTCTGGCCCCTGTCACTCCCACTGAGGTCT...TGAGTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CTCCATCTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCCTTGGAAGGAGCTGTaGCTTCAGGCGTCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LHLAPTLVPSWKRTERLLPWKEL*LQASWW
Trigger: CCACCACGACGCCTGAAGTCACAGCTCCTTCCAAGG...CAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAGATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTGATGTGCCTGTGAGGTaGGAGGTGTGGGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSDVPVR*EVWEGQ
Trigger: CTGTCCCTCCCACACCTCTCACCTCACAGGCACATC...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp GAGTGCTGGGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAGCTCCTCCTTCTCCTaGTGGAGCTGTCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ECWGREEMSPLAYSLGQLSSSFS*WSCRRS
Trigger: GCTGCGGCGACAGCTCCAGCAGGAGAAGGAGGAGCT...GAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCCCAGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAAGCTCCTCCTTCTCCTaGTGGAGCTGTCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: HSTPLASPLPPFGCGNGESSSFS*WSCRRS
Trigger: GCTGCGGCGACAGCTCCAGCAGGAGAAGGAGGAGCT...TTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp ACCTGTCTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTCAGCGTGACACAGACTaGCCCTGGGAAAGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: TCLTMAGESAQHSPSLTSQRDTD*PWESLG
Trigger: TCCGAGGCTTTCCCAGGGGCAGTCTGTGTCACGCTG...AGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAGACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CAAGGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACTCACCCGGGCTGGAGTaGAGTGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QGKTLLGASKTLWVIPCNSPGLE*SGAILA
Trigger: AGCCAAGATCGCGCCACTGCACTCCAGCCCGGGTGA...GTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR CCA 90 bp AGGGAAGGCAGGCGAGGCATTGGCCCCAAGGACCCGGTACAACAGCTCCTCCTTCCACCCTCTTCATTTTaGCCTGGAAAGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: REGRRGIGPKDPVQQLLLPPSSF*PGKPPA
Trigger: AGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGG...AAGGAGGAGCTGTTGTACCGGGTCCTTGGGGCCAATGCCTCGCCTGCCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518189.5
CDS-3UTR CCA 90 bp CAAGGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACAGGCAGGCGAGGCATTaGCCCCAAGGACCCGGTACA +
Preference number: 4 (lower is better)
Translates to: QGKTLLGASKTLWVIPCNRQARH*PQGPGT
Trigger: TGTACCGGGTCCTTGGGGCCAATGCCTCGCCTGCCT...GTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp GGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACTCACCAGGGCCTCACGCGTaGGAAGCAGGTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: GKTLLGASKTLWVIPCNSPGPHA*EAGLLT
Trigger: TGTCAGAAGACCTGCTTCTCACGCGTGAGGCCCTGG...TGAGTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp GCTCTGATAGATGAATGGACTCACAACCACCAAGCTTGCCCCTGTGCCCAGGTGGGTAAACTGAGGCTCTaGGCAGGCCAGGGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ALIDEWTHNHQACPCAQVGKLRL*AGQGGV
Trigger: CACTCCACCCTGGCCTGCTCAGAGCCTCAGTTTACC...CACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp GCTCTGATAGATGAATGGACTCACAACCACCAAGCTTGCCCCTGTGCCCAGGTGGATGTGCCTGTGAGGTaGGAGGTGTGGGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ALIDEWTHNHQACPCAQVDVPVR*EVWEGQ
Trigger: CTGTCCCTCCCACACCTCTCACCTCACAGGCACATC...CACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CTCCATCTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGGCGCATTCTGCAGCCTaGTGTGCCTGTGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LHLAPTLVPSWKRTERLLAHSAA*CACEVR
Trigger: TCTCACCTCACAGGCACATCAGGCTGCAGAATGCGC...CAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp GAGTGCTGGGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCCACAACCACCAAGCTTaGCCCTGTGCCCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ECWGREEMSPLAYSLGQLHNHQA*PCAQVA
Trigger: TGCCACCTGGGCACAGGGGCAAGCTTGGTGGTTGTG...GAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCCCAGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp ACCTGTCTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTGGGCTCTGGTCTGGGTaGCTGTTCTGGTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TCLTMAGESAQHSPSLTSGLWSG*LFWFWF
Trigger: GAACCAGAACCAGAACAGCCACCCAGACCAGAGCCC...AGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAGACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTCCATCTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGTCTATGGTCTCCTGCTaGGTAGAACTGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LHLAPTLVPSWKRTERLLSMVSC*VELASR
Trigger: CCGGGAGGCCAGTTCTACCCAGCAGGAGACCATAGA...CAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AGGGAAGGCAGGCGAGGCATTGGCCCCAAGGACCCGGTACAACAGCTCCTCCTTAGTTTCGGCTCAGAATaGACTCCTCCACCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: REGRRGIGPKDPVQQLLLSFGSE*TPPPSS
Trigger: TGAAGAGGGTGGAGGAGTCCATTCTGAGCCGAAACT...AAGGAGGAGCTGTTGTACCGGGTCCTTGGGGCCAATGCCTCGCCTGCCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518189.5
CDS-3UTR CCA 90 bp CTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGACGCTTCTCGGGGCCTCCGGAACTTCTCGGATTaGGACAGAGTGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLLLIPLANSREDASRGLRNFSD*DRVLGQ
Trigger: CTGCCCCAGCACTCTGTCCCAATCCGAGAAGTTCCG...GAGGCCCCGAGAAGCGTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTCGGAACTTCTCGGATTaGGACAGAGTGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSRNFSD*DRVLGQ
Trigger: CTGCCCCAGCACTCTGTCCCAATCCGAGAAGTTCCG...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTTCACCTTCCCCACTCTaGTTTGCGGGGTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSSPSPL*FAGFVH
Trigger: GTGGACAAACCCCGCAAATCAGAGTGGGGAAGGTGA...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp TCCTGCTGTCTTCTCCAGAAAAACCTTGGAAGGAGCTGTGACTTCAGGCGTCGTACTCTGGCCCAGGAATaGTGCCTCAGCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SCCLLQKNLGRSCDFRRRTLAQE*CLSWGG
Trigger: GCCTCCCCAGCTGAGGCATCATTCCTGGGCCAGAGT...ACGACGCCTGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp ACTTCAGGCGTCGTGGTGGGCCCAGGCCCTGCACCCTATGTGGCGAGGAAAGAGGAAGGCAGTCTGGGATaGTGTCACTATAGAATGACT +
Preference number: 4 (lower is better)
Translates to: TSGVVVGPGPAPYVARKEEGSLG*CHYRMT
Trigger: AGTCATTCTATAGTGACATCATCCCAGACTGCCTTC...CTCTTTCCTCGCCACATAGGGTGCAGGGCCTGGGCCCACCACGACGCCTGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518189.5
CDS-3UTR TCA 90 bp CAAGGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACGCGCATTCTGCAGCCTaGTGTGCCTGTGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: QGKTLLGASKTLWVIPCNAHSAA*CACEVR
Trigger: TCTCACCTCACAGGCACATCAGGCTGCAGAATGCGC...GTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTCTGTCTATGGTCTCCTaGTGGGTAGAACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSLSMVS*WVELAS
Trigger: GGAGGCCAGTTCTACCCAGCAGGAGACCATAGACAG...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTAGGTCTTCTGACAGCTaGCTTGACAGGACCACCTGG +
Preference number: 4 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSRSSDS*LDRTTW
Trigger: CCAGGTGGTCCTGTCAAGGCAGCTGTCAGAAGACCT...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCTCTGGTTCTGGTTCTTaGCGCTTCTTTTTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPSGSGS*RFFFGG
Trigger: ACCCCCGAAAAAGAAGCGCCAAGAACCAGAACCAGA...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR CCA 90 bp GCTCTGATAGATGAATGGACTCACAACCACCAAGCTTGCCCCTGTGCCCAGGTGGCCCTGCACCCTATGTaGCGAGGAAAGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: ALIDEWTHNHQACPCAQVALHPM*RGKRPQ
Trigger: CTGAGGTCTCTTTCCTCGCCACATAGGGTGCAGGGC...CACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGTGACCCTGGCTACTGTCCCTTaGTGGACACGACTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KKYTCDSLQGFPRGSWVTLATVP*WTRLWP
Trigger: GGGCCAGAGTCGTGTCCACCAAGGGACAGTAGCCAG...GGTCACCCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp GGGCCTGGGGCTGAAGCTGGGGACCTTGAGCAAGGCCCTTTGACTCCTGTGATCACCTCTTCCCCCATTTaGCTGTGGAAATGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GPGAEAGDLEQGPLTPVITSSPI*LWKWRN
Trigger: GTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGT...GATCACAGGAGTCAAAGGGCCTTGCTCAAGGTCCCCAGCTTCAGCCCCAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTTTTCCTCGAGGCTCCTaGGTGACCTGTCTGACCATG +
Preference number: 4 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSFPRGS*VTCLTM
Trigger: CATGGTCAGACAGGTCACCCAGGAGCCTCGAGGAAA...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCAATGGGACACTGCAGTaGCATAAGAGTCCTTTGACC +
Preference number: 4 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPNGTLQ*HKSPLT
Trigger: GGTCAAAGGACTCTTATGTCACTGCAGTGTCCCATT...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCAAATCTCCCAACCTTGTaGTCCACCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLASPLPPFGCGNGETQSNLPTL*STHLGL
Trigger: GAGGCCGAGGTGGGTGGATCACAAGGTTGGGAGATT...TGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp AGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCTTCTTGCCACCACAGGCTGCGTaGGGGAAGCCTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RSFVQRGLGEAGYLAPFLPPQAA*GKPGSP
Trigger: TGGGGAGCCAGGCTTCCCTCACGCAGCCTGTGGTGG...CAAGAAGGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR GCA 90 bp GGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGGGAGGGCTGAGGGGATaGACCTTGCCTGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GQGGNVSSCLFPWPTQGKGGLRG*TLPGKG
Trigger: TCCTTTACCAGGCAAGGTGCATCCCCTCAGCCCTCC...CTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp GGAATAGGAACCTGCTTCAAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGGCTCCCAGAACTGGCTaGGGCTCCCATAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: GIGTCFKDLMRTRGGRGMAPRTG*GSHNPG
Trigger: TCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGC...CATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGCAGGTTCCTATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp GGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGGCCCTGCACCCTATGTaGCGAGGAAAGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: GQGGNVSSCLFPWPTQGKALHPM*RGKRPQ
Trigger: CTGAGGTCTCTTTCCTCGCCACATAGGGTGCAGGGC...CTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGACGCTTCTCGGGGCCTCAAGGAAGAGGAGCTCTaGCTACTGTCCCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLLLIPLANSREDASRGLKEEEL*LLSLGG
Trigger: TCCACCAAGGGACAGTAGCCAGAGCTCCTCTTCCTT...GAGGCCCCGAGAAGCGTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp GGAATAGGAACCTGCTTCAAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGCAGGTTGTAAAAGCCTaGGCCTGGGATCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GIGTCFKDLMRTRGGRGMQVVKA*AWDQGQ
Trigger: CTGCCCCTGATCCCAGGCCCAGGCTTTTACAACCTG...CATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGCAGGTTCCTATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGTGACCGCAAGCTCCGCCTCCTaGGTTCACACCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KKYTCDSLQGFPRGSWVTASSAS*VHTILQ
Trigger: CTGGAGAATGGTGTGAACCCAGGAGGCGGAGCTTGC...GGTCACCCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355417.7
3UTR CAA 72 bp AGGTCTTCTGACAGCTGCCTTGACAGGACCACCTGGTaGCGGCTTCGGACATGGAGGTCCTCATTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RSSDSCLDRTTW*RLRTWRSSFSC
Trigger: ACAGGAAAATGAGGACCTCCATGTCCGAAGCCGCAACCAGGTGGTCCTGTCAAGGCAGCTGTCAGAAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518189.5
CDS-3UTR TCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGCCGCTCAGCCTCCTCTaGTGCACAGAGCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWPLSLL*CTELDS
Trigger: ACTGTCCAGCTCTGTGCATCAGAGGAGGCTGAGCGG...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CATGAGGATCAGCCGCCTGTCCAGCTCATGAATACGCTCATTCTTCATCTCGATCCGCTCAGCCTCCTCTaGTGCACAGAGCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: HEDQPPVQLMNTLILHLDPLSLL*CTELDS
Trigger: ACTGTCCAGCTCTGTGCATCAGAGGAGGCTGAGCGG...ATCGAGATGAAGAATGAGCGTATTCATGAGCTGGACAGGCGGCTGATCCTCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR TCA 90 bp GAGTGCTGGGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCTTTCTCCTGTTCATATaGGGCCCGGAGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: ECWGREEMSPLAYSLGQLFLLFI*GPEDLQ
Trigger: CTGCAAGTCCTCCGGGCCTCATATGAACAGGAGAAA...GAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCCCAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTCGCCTGTCCAGCTCATaGATACGCTCATTCTTCATC +
Preference number: 4 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSRLSSS*IRSFFI
Trigger: GATGAAGAATGAGCGTATTCATGAGCTGGACAGGCG...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR TCA 90 bp TTTCCTCATCTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACAGACCTCAGTGGGAGTaGCAGGGGCCAGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FPHLCRDEVPALIDEWTHRPQWE*QGPEGR
Trigger: CCTTCCCTCTGGCCCCTGTCACTCCCACTGAGGTCT...GTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAGATGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp ACCTGTCTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTTCCTGGAAAAGAACTaGGAGGCTCCTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: TCLTMAGESAQHSPSLTSFLEKN*EAPAVF
Trigger: GAAGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAA...AGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAGACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp TGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACAACCACCAAGCTGTCAAATGGCCAGCGTaGCACAGACTGCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CRDEVPALIDEWTHNHQAVKWPA*HRLPLG
Trigger: TCCCAGGGGCAGTCTGTGTCACGCTGGCCATTTGAC...AGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGGTAAACTGAGGCTCTaGGCAGGCCAGGGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWGKLRL*AGQGGV
Trigger: CACTCCACCCTGGCCTGCTCAGAGCCTCAGTTTACC...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACATCACCTTCCCCACTCTaGTTTGCGGGGTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HSPSLTSSPIWLWKWRNTSPSPL*FAGFVH
Trigger: GTGGACAAACCCCGCAAATCAGAGTGGGGAAGGTGA...TGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCAGCCTGATGTGCCTGTaGGGTGAGAGGTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPSLMCL*GERCGR
Trigger: CCTCCCACACCTCTCACCTCACAGGCACATCAGGCT...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp TGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTGCAGCTGCTCAGCCTaGTGTGTCTGCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: WEGQKLCSKRFGRGWILSCSCSA*CVCSPS
Trigger: GGATGGGCTGCAGACACAGCAGGCTGAGCAGCTGCA...GCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR GCA 90 bp CAAGGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACCCTTCCAGGACCCTTTaGTGCTCATCCAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: QGKTLLGASKTLWVIPCNPSRTL*CSSSLS
Trigger: AGACAGACTGGATGAGCAGCAAAGGGTCCTGGAAGG...GTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp TCCTGCTGTCTTCTCCAGAAAAACCTTGGAAGGAGCTGTGACTTCAGGCGTCGTACAGGACCACCTGGTTaGGGCTTCGGACATGGAGGT +
Preference number: 4 (lower is better)
Translates to: SCCLLQKNLGRSCDFRRRTGPPG*GFGHGG
Trigger: ACCTCCATGTCCGAAGCCGCAACCAGGTGGTCCTGT...ACGACGCCTGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAATTCCCCACTCTGATTTaGGGGGTTTGTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: HSTPLASPLPPFGCGNGEFPTLI*GVCPHS
Trigger: GGAGTGTGGACAAACCCCGCAAATCAGAGTGGGGAA...TTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGCACAACCACCAAGCTTaGCCCTGTGCCCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWHNHQA*PCAQVA
Trigger: TGCCACCTGGGCACAGGGGCAAGCTTGGTGGTTGTG...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTCCAGCTCCTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTTCTGGTTATATCCTTCTaGTGCCGCTCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LQLLLPELAGAPIILDMFLVISF*CRSASS
Trigger: AGAGGAGGCTGAGCGGCACCAGAAGGATATAACCAG...AAACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAGGAGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp ACTCCTCCACCCTCTTCATTTTGGCCTGGAAAGCCTCCAGCTGTGAGGTCAGTCCCACCCTCTTCATTTTaGCCTGGAAAGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TPPPSSFWPGKPPAVRSVPPSSF*PGKPPA
Trigger: AGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGG...GACTGACCTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp AAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGTGACCGACACAGACTGCCCCTaGGAAAGCCTCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: KKYTCDSLQGFPRGSWVTDTDCP*ESLGTS
Trigger: AGAAGTTCCGAGGCTTTCCCAGGGGCAGTCTGTGTC...GGTCACCCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCGCAGAGCTGACAAGCTaGGACCAGGGGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPAELTS*DQGLSP
Trigger: AGGAGACAGCCCCTGGTCCCAGCTTGTCAGCTCTGC...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTGAACGCTACTGTCCCTTGGTaGACACGACTCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPLPPFGCGNGETQSPLNATVPW*TRLWPR
Trigger: CCTGGGCCAGAGTCGTGTCCACCAAGGGACAGTAGC...GTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp GGGCCTGGGGCTGAAGCTGGGGACCTTGAGCAAGGCCCTTTGACTCCTGTGATCTGTCCCCAAATAACTTaGCCACCAATCATGTCTACT +
Preference number: 4 (lower is better)
Translates to: GPGAEAGDLEQGPLTPVICPQIT*PPIMST
Trigger: AGTAGACATGATTGGTGGCCAAGTTATTTGGGGACA...GATCACAGGAGTCAAAGGGCCTTGCTCAAGGTCCCCAGCTTCAGCCCCAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTAGCCTCCCAAGCTGCTaGGACTACAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPSLPSC*DYRRPP
Trigger: TGGTGGGCGCCTGTAGTCCCAGCAGCTTGGGAGGCT...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355417.7
3UTR CAA 72 bp TTTCGGCTCAGAATGGACTCCTCCACCCTCTTCATTTaGGCCTGGAAAGCCTCCAGCTGTGAGGTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: FRLRMDSSTLFI*AWKASSCEVSL
Trigger: CAGACTGACCTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGGAGGAGTCCATTCTGAGCCGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR TCA 90 bp TCTCCAGCTCCTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTCGCCTGTCCAGCTCATaGATACGCTCATTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SPAPAPRTGWGSHNPGYVRLSSS*IRSFFI
Trigger: GATGAAGAATGAGCGTATTCATGAGCTGGACAGGCG...AACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAGGAGCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR TCA 90 bp CCCTTTGACTCCTGTGATCTGTTTGCCATGTTGCCAATGAGGAATAGGAACCTGGTCAAATGGCCAGCGTaGCACAGACTGCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PFDSCDLFAMLPMRNRNLVKWPA*HRLPLG
Trigger: TCCCAGGGGCAGTCTGTGTCACGCTGGCCATTTGAC...CAGGTTCCTATTCCTCATTGGCAACATGGCAAACAGATCACAGGAGTCAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCAATGCAGGGGTAAACTaGGGCTCTGAGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPNAGVN*GSEQAR
Trigger: CCTGGCCTGCTCAGAGCCTCAGTTTACCCCTGCATT...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAGACCCGGATGACAGATaGGATCTAGATTCGACTCTG +
Preference number: 4 (lower is better)
Translates to: HSTPLASPLPPFGCGNGEDPDDR*DLDSTL
Trigger: CAGAGTCGAATCTAGATCTCATCTGTCATCCGGGTC...TTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAGTTATATCCTTCTGGTaGCGCTCAGCCTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: HSTPLASPLPPFGCGNGEVISFW*RSASSD
Trigger: ATCAGAGGAGGCTGAGCGGCACCAGAAGGATATAAC...TTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCACAGGACCACCTGGTTaGGGCTTCGGACATGGAGGT +
Preference number: 4 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPTGPPG*GFGHGG
Trigger: ACCTCCATGTCCGAAGCCGCAACCAGGTGGTCCTGT...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCGGAGGGCTGAGGGGATaGACCTTGCCTGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPGGLRG*TLPGKG
Trigger: TCCTTTACCAGGCAAGGTGCATCCCCTCAGCCCTCC...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CAAGGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACTGGTTTCCTCATCTGTaGAGGGATGAGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QGKTLLGASKTLWVIPCNWFPHL*RDEVPA
Trigger: AGCTGGAACCTCATCCCTGCACAGATGAGGAAACCA...GTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTCCTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTTCTTATAGGGCTCTGGTCTGGGTaGCTGTTCTGGTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LLLPELAGAPIILDMFLIGLWSG*LFWFWF
Trigger: GAACCAGAACCAGAACAGCCACCCAGACCAGAGCCC...TATAAGAAACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp CTCCATCTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGTCTGATGCACAGAGCTaGACAGTTATAGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LHLAPTLVPSWKRTERLLSDAQS*TVIAVS
Trigger: GGACACAGCTATAACTGTCCAGCTCTGTGCATCAGA...CAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGTGACCCTGGTTATATCCTTCTaGTGCCGCTCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KKYTCDSLQGFPRGSWVTLVISF*CRSASS
Trigger: AGAGGAGGCTGAGCGGCACCAGAAGGATATAACCAG...GGTCACCCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CCTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTTCTTATAGTTCTATGGTCTCCTGCTaGGTAGAACTGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PAPRTGWGSHNPGYVSYSSMVSC*VELASR
Trigger: CCGGGAGGCCAGTTCTACCCAGCAGGAGACCATAGA...ACTATAAGAAACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp GAGTGCTGGGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAGTTTCGGCTCAGAATaGACTCCTCCACCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ECWGREEMSPLAYSLGQLSFGSE*TPPPSS
Trigger: TGAAGAGGGTGGAGGAGTCCATTCTGAGCCGAAACT...GAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCCCAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp ATGGACTCCTCCACCCTCTTCATTTTGGCCTGGAAAGCCTCCAGCTGTGAGGTCAGTTTCGGCTCAGAATaGACTCCTCCACCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: MDSSTLFILAWKASSCEVSFGSE*TPPPSS
Trigger: TGAAGAGGGTGGAGGAGTCCATTCTGAGCCGAAACT...GACCTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGGAGGAGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp GGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACTCATTGCGGCTTCGGACATaGAGGTCCTCATTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GKTLLGASKTLWVIPCNSLRLRT*RSSFSC
Trigger: ACAGGAAAATGAGGACCTCCATGTCCGAAGCCGCAA...TGAGTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCTTCTTGAGGCAGGCGAGGCATTaGCCCCAAGGACCCGGTACA +
Preference number: 4 (lower is better)
Translates to: RSFVQRGLGEAGYLAPFLRQARH*PQGPGT
Trigger: TGTACCGGGTCCTTGGGGCCAATGCCTCGCCTGCCT...CAAGAAGGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTCCATCTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGGCCTCCAAAACCCTGTaGGTGATTCCATGTAACTCA +
Preference number: 4 (lower is better)
Translates to: LHLAPTLVPSWKRTERLLASKTL*VIPCNS
Trigger: TGAGTTACATGGAATCACCCACAGGGTTTTGGAGGC...CAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TCCTGCTGTCTTCTCCAGAAAAACCTTGGAAGGAGCTGTGACTTCAGGCGTCGTGACACAGACTGCCCCTaGGAAAGCCTCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: SCCLLQKNLGRSCDFRRRDTDCP*ESLGTS
Trigger: AGAAGTTCCGAGGCTTTCCCAGGGGCAGTCTGTGTC...ACGACGCCTGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTGCTGAGGTTAGTTACTGGTGGACACGACTCTaGCCCAGGAATGATGCCTCA +
Preference number: 4 (lower is better)
Translates to: RIRNPQTIRTGRPAEVSYWWTRL*PRNDAS
Trigger: TGAGGCATCATTCCTGGGCCAGAGTCGTGTCCACCA...GTAACTAACCTCAGCAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CCCTTTGACTCCTGTGATCTGTTTGCCATGTTGCCAATGAGGAATAGGAACCTGGCTACTGTCCCTTGGTaGACACGACTCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PFDSCDLFAMLPMRNRNLATVPW*TRLWPR
Trigger: CCTGGGCCAGAGTCGTGTCCACCAAGGGACAGTAGC...CAGGTTCCTATTCCTCATTGGCAACATGGCAAACAGATCACAGGAGTCAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCATTCCTGGAAAAGAACTaGGAGGCTCCTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PLASPLPPFGCGNGETQSFLEKN*EAPAVF
Trigger: GAAGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAA...TGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCAAAACCCTGTGGGTaGTTCCATGTAACTCAAGGC +
Preference number: 4 (lower is better)
Translates to: PLASPLPPFGCGNGETQSPKPCG*FHVTQG
Trigger: GCCTTGAGTTACATGGAATCACCCACAGGGTTTTGG...TGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTAGGATAAGACCCGGATaGCAGATGAGATCTAGATTC +
Preference number: 4 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSRIRPG*QMRSRF
Trigger: GAATCTAGATCTCATCTGTCATCCGGGTCTTATCCT...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAAGACATGAAGCTTCCTaGGAAGGATCCGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: HSTPLASPLPPFGCGNGERHEAS*EGSEIH
Trigger: GTGGATTTCGGATCCTTCTCAGGAAGCTTCATGTCT...TTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CTCCATCTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGGGTATGGAAAGCCTTTaGTGCAAATGCTCTATGCAG +
Preference number: 4 (lower is better)
Translates to: LHLAPTLVPSWKRTERLLGMESL*CKCSMQ
Trigger: CTGCATAGAGCATTTGCATCAAAGGCTTTCCATACC...CAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAGATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTAGCCTGATGTGCCTGTaGGGTGAGAGGTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSSLMCL*GERCGR
Trigger: CCTCCCACACCTCTCACCTCACAGGCACATCAGGCT...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp TGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAAATCTCCCAACCTTGTaGTCCACCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: CGRDRSFVQRGLGEAGYLNLPTL*STHLGL
Trigger: GAGGCCGAGGTGGGTGGATCACAAGGTTGGGAGATT...TAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp GGAATAGGAACCTGCTTCAAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGGTTATATCCTTCTGGTaGCGCTCAGCCTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GIGTCFKDLMRTRGGRGMVISFW*RSASSD
Trigger: ATCAGAGGAGGCTGAGCGGCACCAGAAGGATATAAC...CATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGCAGGTTCCTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGAGGTCTTCTGACAGCTaGCTTGACAGGACCACCTGG +
Preference number: 4 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWRSSDS*LDRTTW
Trigger: CCAGGTGGTCCTGTCAAGGCAGCTGTCAGAAGACCT...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp GGAATAGGAACCTGCTTCAAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGTTCGACTCTGGGAACTaGTCCATGCCTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GIGTCFKDLMRTRGGRGMFDSGN*SMPWFP
Trigger: AGGAAACCAAGGCATGGAGCAGTTCCCAGAGTCGAA...CATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGCAGGTTCCTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTGCTGAGGTTAGTTACCTGGTTATATCCTTCTaGTGCCGCTCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RIRNPQTIRTGRPAEVSYLVISF*CRSASS
Trigger: AGAGGAGGCTGAGCGGCACCAGAAGGATATAACCAG...GTAACTAACCTCAGCAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp GGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGCTCTTCATTTTGGCCTaGAAAGCCTCCAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GQGGNVSSCLFPWPTQGKLFILA*KASSCE
Trigger: CTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAG...CTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTTCTTATAGTTGCTCCCAGAACTGGCTaGGGCTCCCATAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: LLPELAGAPIILDMFLIVAPRTG*GSHNPG
Trigger: TCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGC...AACTATAAGAAACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp GGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGTTGCGGCTTCGGACATaGAGGTCCTCATTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GQGGNVSSCLFPWPTQGKLRLRT*RSSFSC
Trigger: ACAGGAAAATGAGGACCTCCATGTCCGAAGCCGCAA...CTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTGGTGGACACGACTCTaGCCCAGGAATGATGCCTCA +
Preference number: 4 (lower is better)
Translates to: WEGQKLCSKRFGRGWILSWWTRL*PRNDAS
Trigger: TGAGGCATCATTCCTGGGCCAGAGTCGTGTCCACCA...GCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp ACCTGTCTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTGCTCTGATAGATGAATaGACTCACAACCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: TCLTMAGESAQHSPSLTSALIDE*THNHQA
Trigger: AGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGC...AGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAGACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCTTTCCTCGAGGCTCCTaGGTGACCTGTCTGACCATG +
Preference number: 4 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPFPRGS*VTCLTM
Trigger: CATGGTCAGACAGGTCACCCAGGAGCCTCGAGGAAA...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTTGCGTGAGGGAAGCCTaGCTCCCCACAACTTGCTCC +
Preference number: 4 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSCVREA*LPTTCS
Trigger: GGAGCAAGTTGTGGGGAGCCAGGCTTCCCTCACGCA...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR TCA 90 bp TGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACAACCACCAAGCTTTTCTCCTGTTCATATaGGGCCCGGAGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: CRDEVPALIDEWTHNHQAFLLFI*GPEDLQ
Trigger: CTGCAAGTCCTCCGGGCCTCATATGAACAGGAGAAA...AGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCCTTTCACTGTTTCCATaGGGATCAGCCGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPLSLFP*GSAACP
Trigger: TGGACAGGCGGCTGATCCTCATGGAAACAGTGAAAG...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR TCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTAATGCAGGGGTAAACTaGGGCTCTGAGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSNAGVN*GSEQAR
Trigger: CCTGGCCTGCTCAGAGCCTCAGTTTACCCCTGCATT...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTGCTTCAAGGATCTTATaGGGACCAGGGGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSASRIL*GPGEGG
Trigger: CCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGC...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp GAGTGCTGGGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCGAAGGCAGTCTGGGATaGTGTCACTATAGAATGACT +
Preference number: 4 (lower is better)
Translates to: ECWGREEMSPLAYSLGQLEGSLG*CHYRMT
Trigger: AGTCATTCTATAGTGACATCATCCCAGACTGCCTTC...GAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCCCAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp TCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTGAACCCTTCCAGGACCCTTTaGTGCTCATCCAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SPLPPFGCGNGETQSPLNPSRTL*CSSSLS
Trigger: AGACAGACTGGATGAGCAGCAAAGGGTCCTGGAAGG...GTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTGAGGCCCGGAGGACTTaGAGGGCCTCTTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPEARRT*RASSFF
Trigger: AAAGAATGAAGAGGCCCTGCAAGTCCTCCGGGCCTC...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp TGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTACTGTCTATGGTCTCCTaGTGGGTAGAACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CGRDRSFVQRGLGEAGYLLSMVS*WVELAS
Trigger: GGAGGCCAGTTCTACCCAGCAGGAGACCATAGACAG...TAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTTCTTATAGTTCTGTCTATGGTCTCCTaGTGGGTAGAACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLPELAGAPIILDMFLIVLSMVS*WVELAS
Trigger: GGAGGCCAGTTCTACCCAGCAGGAGACCATAGACAG...AACTATAAGAAACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp ATGGACTCCTCCACCCTCTTCATTTTGGCCTGGAAAGCCTCCAGCTGTGAGGTCGTTGCTGGAGAATTCTaGTTATATCCTTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: MDSSTLFILAWKASSCEVVAGEF*LYPSGA
Trigger: GGCACCAGAAGGATATAACCAGAATTCTCCAGCAAC...GACCTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGGAGGAGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp CTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTTCTTATAGTTGCCTCCCGGAAAGAGTaGGTAAGCGCTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLPELAGAPIILDMFLIVASRKE*VSASFS
Trigger: GGAGAAAGAAGCGCTTACCCACTCTTTCCGGGAGGC...AACTATAAGAAACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGATTGGGACAGAGTGCTaGGGCAGGGAGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWIGTEC*GREEMS
Trigger: AGACATTTCCTCCCTGCCCCAGCACTCTGTCCCAAT...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACATCCCCCATTTGGCTGTaGAAATGGAGAAACACAGTC +
Preference number: 4 (lower is better)
Translates to: HSPSLTSSPIWLWKWRNTSPIWL*KWRNTV
Trigger: GACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGA...TGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp TTCTTTTTAGTTTCCATACATCGTCTGTCCCAGAGTGAGGAGAAGTTGATCTCCCCGCTCAGCCTCCTCTaGTGCACAGAGCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: FFLVSIHRLSQSEEKLISPLSLL*CTELDS
Trigger: ACTGTCCAGCTCTGTGCATCAGAGGAGGCTGAGCGG...GGAGATCAACTTCTCCTCACTCTGGGACAGACGATGTATGGAAACTAAAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR TCA 90 bp TCCTCCACCCTCTTCATTTTGGCCTGGAAAGCCTCCAGCTGTGAGGTCAGTCTGCATTCTTCATCTCGATaGCAAAGTGTAAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSTLFILAWKASSCEVSLHSSSR*QSVSSP
Trigger: TGGAGAGCTTACACTTTGTCATCGAGATGAAGAATG...CAGACTGACCTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR TCA 90 bp CCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCAAGGATAAGACCCGGATaGCAGATGAGATCTAGATTC +
Preference number: 4 (lower is better)
Translates to: PLASPLPPFGCGNGETQSRIRPG*QMRSRF
Trigger: GAATCTAGATCTCATCTGTCATCCGGGTCTTATCCT...TGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp AGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTGCTGAGGTTAGTTACGAAAAAGTACACATGTaGTTCCCTCCAGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RIRNPQTIRTGRPAEVSYEKVHM*FPPGLS
Trigger: GGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTC...GTAACTAACCTCAGCAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTTCTTTTTCGGGGGTTTaGAGCTGCTCAGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPSFSGV*SCSACC
Trigger: ACAGCAGGCTGAGCAGCTGCAAACCCCCGAAAAAGA...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR GCA 90 bp CCCTTTGACTCCTGTGATCTGTTTGCCATGTTGCCAATGAGGAATAGGAACCTGTCCAGGACCCTTTGCTaGTCATCCAGTCTGTCTCGA +
Preference number: 4 (lower is better)
Translates to: PFDSCDLFAMLPMRNRNLSRTLC*SSSLSR
Trigger: TCGAGACAGACTGGATGAGCAGCAAAGGGTCCTGGA...CAGGTTCCTATTCCTCATTGGCAACATGGCAAACAGATCACAGGAGTCAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTTCCCCCGATGCAAATGCTCTATaGAGAACAGGAGTTATAATT +
Preference number: 4 (lower is better)
Translates to: LTMAGESAQHSPSLTSSPDANAL*RTGVII
Trigger: AATTATAACTCCTGTTCTGCATAGAGCATTTGCATC...GGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp GGAATAGGAACCTGCTTCAAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGTGGCTGTTCTGGTTCTaGTTCTTGGCGCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GIGTCFKDLMRTRGGRGMWLFWF*FLALLF
Trigger: AAAAAGAAGCGCCAAGAACCAGAACCAGAACAGCCA...CATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGCAGGTTCCTATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR CCA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGGGGCTCTGGTCTGGGTaGCTGTTCTGGTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMGLWSG*LFWFWF
Trigger: GAACCAGAACCAGAACAGCCACCCAGACCAGAGCCC...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TCCTGCTGTCTTCTCCAGAAAAACCTTGGAAGGAGCTGTGACTTCAGGCGTCGTTCTGATGCACAGAGCTaGACAGTTATAGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SCCLLQKNLGRSCDFRRRSDAQS*TVIAVS
Trigger: GGACACAGCTATAACTGTCCAGCTCTGTGCATCAGA...ACGACGCCTGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TCCTCCACCCTCTTCATTTTGGCCTGGAAAGCCTCCAGCTGTGAGGTCAGTCTGTCCTCCTCATGTTGCTaGAGAATTCTGGTTATATCC +
Preference number: 4 (lower is better)
Translates to: SSTLFILAWKASSCEVSLSSSCC*RILVIS
Trigger: GGATATAACCAGAATTCTCCAGCAACATGAGGAGGA...CAGACTGACCTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp CCCTTTGACTCCTGTGATCTGTTTGCCATGTTGCCAATGAGGAATAGGAACCTGCCACCCTCTTCATTTTaGCCTGGAAAGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PFDSCDLFAMLPMRNRNLPPSSF*PGKPPA
Trigger: AGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGG...CAGGTTCCTATTCCTCATTGGCAACATGGCAAACAGATCACAGGAGTCAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CCCTTTGACTCCTGTGATCTGTTTGCCATGTTGCCAATGAGGAATAGGAACCTGATTGGGACAGAGTGCTaGGGCAGGGAGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: PFDSCDLFAMLPMRNRNLIGTEC*GREEMS
Trigger: AGACATTTCCTCCCTGCCCCAGCACTCTGTCCCAAT...CAGGTTCCTATTCCTCATTGGCAACATGGCAAACAGATCACAGGAGTCAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAAAGGAAGAGGAGCTCTaGCTACTGTCCCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CGRDRSFVQRGLGEAGYLKEEEL*LLSLGG
Trigger: TCCACCAAGGGACAGTAGCCAGAGCTCCTCTTCCTT...TAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGCAGGTTGTAAAAGCCTaGGCCTGGGATCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMQVVKA*AWDQGQ
Trigger: CTGCCCCTGATCCCAGGCCCAGGCTTTTACAACCTG...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTACTGTCTGACCATGGCTaGAGAATCAGCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: CGRDRSFVQRGLGEAGYLLSDHG*RISTAL
Trigger: GAGTGCTGTGCTGATTCTCCAGCCATGGTCAGACAG...TAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp TTTCCTCATCTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACCCAAAACCCTGTGGGTaGTTCCATGTAACTCAAGGC +
Preference number: 4 (lower is better)
Translates to: FPHLCRDEVPALIDEWTHPKPCG*FHVTQG
Trigger: GCCTTGAGTTACATGGAATCACCCACAGGGTTTTGG...GTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAGATGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGTCCAGCTCTGATAGATaGATGGACTCACAACCACCA +
Preference number: 4 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWSSSDR*MDSQPP
Trigger: TGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGA...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAAAACACAGTCACCTCTaGACTTCTAAACCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: HSTPLASPLPPFGCGNGEKHSHL*TSKPRN
Trigger: GTTTCTAGGTTTAGAAGTTCAGAGGTGACTGTGTTT...TTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCGAAAAAGTACACATGTaGTTCCCTCCAGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPEKVHM*FPPGLS
Trigger: GGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTC...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGGAGGCCCGGAGGACTTaGAGGGCCTCTTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMEARRT*RASSFF
Trigger: AAAGAATGAAGAGGCCCTGCAAGTCCTCCGGGCCTC...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CCCTTTGACTCCTGTGATCTGTTTGCCATGTTGCCAATGAGGAATAGGAACCTGTGGTTTCCTCATCTGTaGAGGGATGAGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PFDSCDLFAMLPMRNRNLWFPHL*RDEVPA
Trigger: AGCTGGAACCTCATCCCTGCACAGATGAGGAAACCA...CAGGTTCCTATTCCTCATTGGCAACATGGCAAACAGATCACAGGAGTCAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTTTCGACTCTGGGAACTaGTCCATGCCTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPFDSGN*SMPWFP
Trigger: AGGAAACCAAGGCATGGAGCAGTTCCCAGAGTCGAA...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp CAAGGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACAGTGTATCGCAGATGTaGTTTGCAAAAAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: QGKTLLGASKTLWVIPCNSVSQM*FAKSFM
Trigger: CATGAAGCTTTTTGCAAAGCACATCTGCGATACACT...GTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CATGAGGATCAGCCGCCTGTCCAGCTCATGAATACGCTCATTCTTCATCTCGATTCTGATGCACAGAGCTaGACAGTTATAGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: HEDQPPVQLMNTLILHLDSDAQS*TVIAVS
Trigger: GGACACAGCTATAACTGTCCAGCTCTGTGCATCAGA...ATCGAGATGAAGAATGAGCGTATTCATGAGCTGGACAGGCGGCTGATCCTCATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp AGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTGCTGAGGTTAGTTACGTTGCTGGAGAATTCTaGTTATATCCTTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RIRNPQTIRTGRPAEVSYVAGEF*LYPSGA
Trigger: GGCACCAGAAGGATATAACCAGAATTCTCCAGCAAC...GTAACTAACCTCAGCAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TCCTGCTGTCTTCTCCAGAAAAACCTTGGAAGGAGCTGTGACTTCAGGCGTCGTGTTGCTGGAGAATTCTaGTTATATCCTTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SCCLLQKNLGRSCDFRRRVAGEF*LYPSGA
Trigger: GGCACCAGAAGGATATAACCAGAATTCTCCAGCAAC...ACGACGCCTGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGGCCTCCCGGAAAGAGTaGGTAAGCGCTTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMASRKE*VSASFS
Trigger: GGAGAAAGAAGCGCTTACCCACTCTTTCCGGGAGGC...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTGAACGCCTCCAAAACCCTGTaGGTGATTCCATGTAACTCA +
Preference number: 4 (lower is better)
Translates to: SPLPPFGCGNGETQSPLNASKTL*VIPCNS
Trigger: TGAGTTACATGGAATCACCCACAGGGTTTTGGAGGC...GTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACAACCACCAAGCTTCTTGCTTATTCCCTTaGCCAACTCAAGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: CRDEVPALIDEWTHNHQASCLFP*PTQGKT
Trigger: CGTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGA...AGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACAACCACCAAGCTTCCCCCATTTGGCTGTaGAAATGGAGAAACACAGTC +
Preference number: 4 (lower is better)
Translates to: CRDEVPALIDEWTHNHQASPIWL*KWRNTV
Trigger: GACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGA...AGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTGAACACCTCTTCCCCCATTTaGCTGTGGAAATGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SPLPPFGCGNGETQSPLNTSSPI*LWKWRN
Trigger: GTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGT...GTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CCCTTTGACTCCTGTGATCTGTTTGCCATGTTGCCAATGAGGAATAGGAACCTGTCCAGCTCTGATAGATaGATGGACTCACAACCACCA +
Preference number: 4 (lower is better)
Translates to: PFDSCDLFAMLPMRNRNLSSSDR*MDSQPP
Trigger: TGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGA...CAGGTTCCTATTCCTCATTGGCAACATGGCAAACAGATCACAGGAGTCAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTGACCCGGATGACAGATaGGATCTAGATTCGACTCTG +
Preference number: 4 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSDPDDR*DLDSTL
Trigger: CAGAGTCGAATCTAGATCTCATCTGTCATCCGGGTC...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGGTATGGAAAGCCTTTaGTGCAAATGCTCTATGCAG +
Preference number: 4 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWGMESL*CKCSMQ
Trigger: CTGCATAGAGCATTTGCATCAAAGGCTTTCCATACC...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp GGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGAAACACAGTCACCTCTaGACTTCTAAACCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GQGGNVSSCLFPWPTQGKKHSHL*TSKPRN
Trigger: GTTTCTAGGTTTAGAAGTTCAGAGGTGACTGTGTTT...CTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CCTGGATATGTTTCTTATAGTTTCGGCTCAGAATGGACTCCTCCACCCTCTTCATTTCTCCTGTTCATATaGGGCCCGGAGGACTGTTGT +
Preference number: 4 (lower is better)
Translates to: PGYVSYSFGSEWTPPPSSFLLFI*GPEDCC
Trigger: ACAACAGTCCTCCGGGCCTCATATGAACAGGAGAAA...TGAAGAGGGTGGAGGAGTCCATTCTGAGCCGAAACTATAAGAAACATATCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR GCA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCCAGGACCCTTTGCTaGTCATCCAGTCTGTCTCGA +
Preference number: 4 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMSRTLC*SSSLSR
Trigger: TCGAGACAGACTGGATGAGCAGCAAAGGGTCCTGGA...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTCTCTTCATTTTGGCCTaGAAAGCCTCCAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSLFILA*KASSCE
Trigger: CTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAG...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CCTGGATATGTTTCTTATAGTTTCGGCTCAGAATGGACTCCTCCACCCTCTTCACTCTTCATTTTGGCCTaGAAAGCCTCCAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PGYVSYSFGSEWTPPPSSLFILA*KASSCE
Trigger: CTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAG...TGAAGAGGGTGGAGGAGTCCATTCTGAGCCGAAACTATAAGAAACATATCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CCA 90 bp TTTCCTCATCTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACTCTTGCTTATTCCCTTaGCCAACTCAAGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: FPHLCRDEVPALIDEWTHSCLFP*PTQGKT
Trigger: CGTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGA...GTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAGATGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACAACCACCAAGCTGCTCTGATAGATGAATaGACTCACAACCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: CRDEVPALIDEWTHNHQAALIDE*THNHQA
Trigger: AGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGC...AGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp AGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTGCTGAGGTTAGTTACTGTCCCCAAATAACTTaGCCACCAATCATGTCTACT +
Preference number: 4 (lower is better)
Translates to: RIRNPQTIRTGRPAEVSYCPQIT*PPIMST
Trigger: AGTAGACATGATTGGTGGCCAAGTTATTTGGGGACA...GTAACTAACCTCAGCAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp GGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGGTTTGCCACACACATTaGCATATTAAAGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQGGNVSSCLFPWPTQGKVCHTH*HIKGSE
Trigger: CTCAGAACCTTTAATATGCCAATGTGTGTGGCAAAC...CTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp TCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTGAACCATTCTTCATCTCGATaGCAAAGTGTAAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPLPPFGCGNGETQSPLNHSSSR*QSVSSP
Trigger: TGGAGAGCTTACACTTTGTCATCGAGATGAAGAATG...GTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp TGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCCATTCTTCATCTCGATaGCAAAGTGTAAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WEGQKLCSKRFGRGWILSHSSSR*QSVSSP
Trigger: TGGAGAGCTTACACTTTGTCATCGAGATGAAGAATG...GCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp AGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCTTCTTGAATGGGACACTGCAGTaGCATAAGAGTCCTTTGACC +
Preference number: 4 (lower is better)
Translates to: RSFVQRGLGEAGYLAPFLNGTLQ*HKSPLT
Trigger: GGTCAAAGGACTCTTATGTCACTGCAGTGTCCCATT...CAAGAAGGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTAGACATGAAGCTTCCTaGGAAGGATCCGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSRHEAS*EGSEIH
Trigger: GTGGATTTCGGATCCTTCTCAGGAAGCTTCATGTCT...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCGTCTGTCCCAGAGTaGGGAGAAGTTGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMSSVPE*GEVDLL
Trigger: AAGGAGATCAACTTCTCCTCACTCTGGGACAGACGA...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR GCA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTGGAAATGTCTCCTCTTaGTTATTCCCTTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPGNVSS*LFPWPT
Trigger: AGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCC...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp TTTCCTCATCTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACGGAAATGTCTCCTCTTaGTTATTCCCTTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: FPHLCRDEVPALIDEWTHGNVSS*LFPWPT
Trigger: AGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCC...GTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAGATGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TTTCCTCATCTGTGCAGGGATGAGGTTCCAGCTCTGATAGATGAATGGACTCACTCCTCCTCATGTTGCTaGAGAATTCTGGTTATATCC +
Preference number: 4 (lower is better)
Translates to: FPHLCRDEVPALIDEWTHSSSCC*RILVIS
Trigger: GGATATAACCAGAATTCTCCAGCAACATGAGGAGGA...GTGAGTCCATTCATCTATCAGAGCTGGAACCTCATCCCTGCACAGATGAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGTTTGCCACACACATTaGCATATTAAAGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWVCHTH*HIKGSE
Trigger: CTCAGAACCTTTAATATGCCAATGTGTGTGGCAAAC...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR TCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTTTTCTGTCCAGCTCATaGATACGCTCATTCTTCATC +
Preference number: 4 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSFLSSS*IRSFFI
Trigger: GATGAAGAATGAGCGTATTCATGAGCTGGACAGAAA...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518189.5
CDS-3UTR GCA 90 bp TGTGGGAGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAAGTGTATCGCAGATGTaGTTTGCAAAAAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: CGRDRSFVQRGLGEAGYLSVSQM*FAKSFM
Trigger: CATGAAGCTTTTTGCAAAGCACATCTGCGATACACT...TAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCTCCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CCA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTTCCTCCTCATGTTGCTaGAGAATTCTGGTTATATCC +
Preference number: 4 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSSSSCC*RILVIS
Trigger: GGATATAACCAGAATTCTCCAGCAACATGAGGAGGA...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR GCA 90 bp AGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCTTCTTGGATGCAAATGCTCTATaGAGAACAGGAGTTATAATT +
Preference number: 4 (lower is better)
Translates to: RSFVQRGLGEAGYLAPFLDANAL*RTGVII
Trigger: AATTATAACTCCTGTTCTGCATAGAGCATTTGCATC...CAAGAAGGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp AGGGAAGGCAGGCGAGGCATTGGCCCCAAGGACCCGGTACAACAGCTCCTCCTTTCACAACCACCAAGCTaGCCCCTGTGCCCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: REGRRGIGPKDPVQQLLLSQPPS*PLCPGG
Trigger: GCCACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGA...AAGGAGGAGCTGTTGTACCGGGTCCTTGGGGCCAATGCCTCGCCTGCCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518189.5
CDS-3UTR CAA 90 bp GGGCCTGGGGCTGAAGCTGGGGACCTTGAGCAAGGCCCTTTGACTCCTGTGATCCTTCCCCACTCTGATTaGCGGGGTTTGTCCACACTC +
Preference number: 5 (lower is better)
Translates to: GPGAEAGDLEQGPLTPVILPHSD*RGLSTL
Trigger: GAGTGTGGACAAACCCCGCAAATCAGAGTGGGGAAG...GATCACAGGAGTCAAAGGGCCTTGCTCAAGGTCCCCAGCTTCAGCCCCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS CCA 90 bp AGCAGGAAAGGAGGGTCCCTTGCTCAGGAGGCCTGGGTGAGAACCTaGAGCCCTCCACACCATCCCCTGTTCTTCAGCAGACAGTGTAAG +
Preference number: 5 (lower is better)
Translates to: SRKGGSLAQEAWVRT*SPPHHPLFFSRQCK
Trigger: CTTACACTGTCTGCTGAAGAACAGGGGATGGTGTGGAGGGCTCCAGGTTCTCACCCAGGCCTCCTGAGCAAGGGACCCTCCTTTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519740.1
CDS-3UTR CAA 90 bp GGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACTCAGACAGGACCACCTGGTaGCGGCTTCGGACATGGAGG +
Preference number: 5 (lower is better)
Translates to: GKTLLGASKTLWVIPCNSDRTTW*RLRTWR
Trigger: CCTCCATGTCCGAAGCCGCAACCAGGTGGTCCTGTC...TGAGTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp CACAGCACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAATCACAACCACCAAGCTaGCCCCTGTGCCCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: HSTPLASPLPPFGCGNGESQPPS*PLCPGG
Trigger: GCCACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGA...TTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTCTTCTGACAGCTGCCTaGACAGGACCACCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSLLTAA*TGPPGC
Trigger: GCAACCAGGTGGTCCTGTCAAGGCAGCTGTCAGAAG...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp CTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGACGCTTCTCGGGGCCTCCTTCTGACAGCTGCCTaGACAGGACCACCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: LLLLIPLANSREDASRGLLLTAA*TGPPGC
Trigger: GCAACCAGGTGGTCCTGTCAAGGCAGCTGTCAGAAG...GAGGCCCCGAGAAGCGTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS CCA 90 bp AGCTGGACAGTTATAGCTGTGTCCCCATTGAGGGGACCTAATTCATaGGGCTCTGGTCTGGGTGGCTGTTCTGGTTCTGGTTCTTGGCGC +
Preference number: 5 (lower is better)
Translates to: SWTVIAVSPLRGPNS*GSGLGGCSGSGSWR
Trigger: GCGCCAAGAACCAGAACCAGAACAGCCACCCAGACCAGAGCCCCATGAATTAGGTCCCCTCAATGGGGACACAGCTATAACTGTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000522964.1
ENST00000524344.5
CDS CCA 90 bp CTGTCTATGGTCTCCTGCTGGGTAGAACTGGCCTCCCGGAAAGAGTaGGTAAGCGCTTCTTTCTCCTGTTCATATGAGGCCCGGAGGACT +
Preference number: 5 (lower is better)
Translates to: LSMVSCWVELASRKE*VSASFSCSYEARRT
Trigger: AGTCCTCCGGGCCTCATATGAACAGGAGAAAGAAGCGCTTACCCACTCTTTCCGGGAGGCCAGTTCTACCCAGCAGGAGACCATAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
ENST00000522964.1
CDS-3UTR CAA 90 bp CAAGGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACTCCACCCTCTTCATTTaGGCCTGGAAAGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QGKTLLGASKTLWVIPCNSTLFI*AWKASS
Trigger: GCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGGA...GTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp TCTCCAGCTCCTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTTCCACCCTCTTCATTTaGGCCTGGAAAGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SPAPAPRTGWGSHNPGYVSTLFI*AWKASS
Trigger: GCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGGA...AACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAGGAGCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CAA 90 bp GGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACTCACTGAGGGGATGCACCTaGCCTGGTAAAGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: GKTLLGASKTLWVIPCNSLRGCT*PGKGRG
Trigger: TCCTCTTCCTTTACCAGGCAAGGTGCATCCCCTCAG...TGAGTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS GCA 90 bp CGGAGGACTTGCAGGGCCTCTTCATTCTTTCCTTCCAGGACCCTTTaGTGCTCATCCAGTCTGTCTCGAAGCTCTAGCTCCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RRTCRASSFFPSRTL*CSSSLSRSSSSLSF
Trigger: GAAGGAAAGGGAGCTAGAGCTTCGAGACAGACTGGATGAGCAGCAAAGGGTCCTGGAAGGAAAGAATGAAGAGGCCCTGCAAGTCCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
CDS-3UTR CAA 90 bp GGAATAGGAACCTGCTTCAAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGTTCTTTTTCGGGGGTTaGCAGCTGCTCAGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GIGTCFKDLMRTRGGRGMFFFGG*QLLSLL
Trigger: CAGCAGGCTGAGCAGCTGCAAACCCCCGAAAAAGAA...CATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGCAGGTTCCTATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS-3UTR CAA 90 bp GTGCCTGGACTAAAACAATGCTTTCTAAAGCGCATTCTGCAGCCTGATGTGCCTGACAGGACCACCTGGTaGCGGCTTCGGACATGGAGG +
Preference number: 5 (lower is better)
Translates to: VPGLKQCFLKRILQPDVPDRTTW*RLRTWR
Trigger: CCTCCATGTCCGAAGCCGCAACCAGGTGGTCCTGTC...AGGCACATCAGGCTGCAGAATGCGCTTTAGAAAGCATTGTTTTAGTCCAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp CTCCATCTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTCTTGCTTATTCCCTaGGCCAACTCAAGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LHLAPTLVPSWKRTERLLLLLIP*ANSRED
Trigger: GTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAG...CAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAGATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp GGAATAGGAACCTGCTTCAAGGATCTTATGAGGACCAGGGGAGGGAGGGGTATGCTTCCCCACTCTGATTaGCGGGGTTTGTCCACACTC +
Preference number: 5 (lower is better)
Translates to: GIGTCFKDLMRTRGGRGMLPHSD*RGLSTL
Trigger: GAGTGTGGACAAACCCCGCAAATCAGAGTGGGGAAG...CATACCCCTCCCTCCCCTGGTCCTCATAAGATCCTTGAAGCAGGTTCCTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCTCTGGCTACTGTCCCTaGGTGGACACGACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPSGYCP*VDTTLA
Trigger: GGCCAGAGTCGTGTCCACCAAGGGACAGTAGCCAGA...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS GCA 90 bp AGGACTTGCAGGGCCTCTTCATTCTTTCCTTCCAGGACCCTTTGCTaGTCATCCAGTCTGTCTCGAAGCTCTAGCTCCCTTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RTCRASSFFPSRTLC*SSSLSRSSSSLSFS
Trigger: GGAGAAGGAAAGGGAGCTAGAGCTTCGAGACAGACTGGATGAGCAGCAAAGGGTCCTGGAAGGAAAGAATGAAGAGGCCCTGCAAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
CDS GCA 90 bp CCCTTACCTTGCAGGGCCTCTTCATTCTTTCCTTCCAGGACCCTTTaGTGCTCATCCAGTCTGTCTCGAAGCTCTAGCTCCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: PLPCRASSFFPSRTL*CSSSLSRSSSSLSF
Trigger: GAAGGAAAGGGAGCTAGAGCTTCGAGACAGACTGGATGAGCAGCAAAGGGTCCTGGAAGGAAAGAATGAAGAGGCCCTGCAAGGTAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524344.5
CDS-3UTR CAA 90 bp TCCTGCTGTCTTCTCCAGAAAAACCTTGGAAGGAGCTGTGACTTCAGGCGTCGTTCCTTCCAGGACCCTTaGCTGCTCATCCAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: SCCLLQKNLGRSCDFRRRSFQDP*LLIQSV
Trigger: GACAGACTGGATGAGCAGCAAAGGGTCCTGGAAGGA...ACGACGCCTGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp AGGATCCGAAATCCACAGACTATCAGGACTGGACGGCCTGCTGAGGTTAGTTACTCCACCCTCTTCATTTaGGCCTGGAAAGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RIRNPQTIRTGRPAEVSYSTLFI*AWKASS
Trigger: GCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGGA...GTAACTAACCTCAGCAGGCCGTCCAGTCCTGATAGTCTGTGGATTTCGGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp ACCTGTCTGACCATGGCTGGAGAATCAGCACAGCACTCCCCTAGCCTCACCTCTGTGTCCCCAAATAACTaGGCCACCAATCATGTCTAC +
Preference number: 5 (lower is better)
Translates to: TCLTMAGESAQHSPSLTSVSPNN*ATNHVY
Trigger: GTAGACATGATTGGTGGCCAAGTTATTTGGGGACAC...AGAGGTGAGGCTAGGGGAGTGCTGTGCTGATTCTCCAGCCATGGTCAGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS GCA 90 bp TTACCTTGCAGGGCCTCTTCATTCTTTCCTTCCAGGACCCTTTGCTaGTCATCCAGTCTGTCTCGAAGCTCTAGCTCCCTTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LPCRASSFFPSRTLC*SSSLSRSSSSLSFS
Trigger: GGAGAAGGAAAGGGAGCTAGAGCTTCGAGACAGACTGGATGAGCAGCAAAGGGTCCTGGAAGGAAAGAATGAAGAGGCCCTGCAAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524344.5
CDS CCA 90 bp GGTCTGGGTGGCTGTTCTGGTTCTGGTTCTTGGCGCTTCTTCAAATaGCACGCAAGAAGATCAGTTTCAGCTAGGTGTGGTAGCTCACAC +
Preference number: 5 (lower is better)
Translates to: GLGGCSGSGSWRFFK*HARRSVSARCGSSH
Trigger: GTGTGAGCTACCACACCTAGCTGAAACTGATCTTCTTGCGTGCCATTTGAAGAAGCGCCAAGAACCAGAACCAGAACAGCCACCCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522179.1
CDS-3UTR CAA 90 bp TCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTGAACTCCTTCCAGGACCCTTaGCTGCTCATCCAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: SPLPPFGCGNGETQSPLNSFQDP*LLIQSV
Trigger: GACAGACTGGATGAGCAGCAAAGGGTCCTGGAAGGA...GTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp GGGCAGGGAGGAAATGTCTCCTCTTGCTTATTCCCTTGGCCAACTCAAGGGAAGCTCTTGCTTATTCCCTaGGCCAACTCAAGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: GQGGNVSSCLFPWPTQGKLLLIP*ANSRED
Trigger: GTCTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAG...CTTCCCTTGAGTTGGCCAAGGGAATAAGCAAGAGGAGACATTTCCTCCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp CCCTTTGACTCCTGTGATCTGTTTGCCATGTTGCCAATGAGGAATAGGAACCTGTCGGAACTTCTCGGATaGGGACAGAGTGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: PFDSCDLFAMLPMRNRNLSELLG*GQSAGA
Trigger: TGCCCCAGCACTCTGTCCCAATCCGAGAAGTTCCGA...CAGGTTCCTATTCCTCATTGGCAACATGGCAAACAGATCACAGGAGTCAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTTCTGGCTACTGTCCCTaGGTGGACACGACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSSGYCP*VDTTLA
Trigger: GGCCAGAGTCGTGTCCACCAAGGGACAGTAGCCAGA...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp CTCGCTCCCACCCTCGTTCCTTCCTGGAAAAGAACTGAGAGGCTCCTGCTGTCTGATGAAAAATGCAGATaGACTGTTCTGACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LAPTLVPSWKRTERLLLSDEKCR*TVLTLA
Trigger: AGCCAGCGTCAGAACAGTCAATCTGCATTTTTCATC...AGACAGCAGGAGCCTCTCAGTTCTTTTCCAGGAAGGAACGAGGGTGGGAGCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp CAAGGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACGTGTCCCCAAATAACTaGGCCACCAATCATGTCTAC +
Preference number: 5 (lower is better)
Translates to: QGKTLLGASKTLWVIPCNVSPNN*ATNHVY
Trigger: GTAGACATGATTGGTGGCCAAGTTATTTGGGGACAC...GTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS GCA 90 bp CTAGGGTTTCTGAGGCTTCTGTCCTCCCGTGTTCTCAATGCTACCTaGCCTAGTGTCACCCAAGCTACAGCAACATCAGTAGCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: LGFLRLLSSRVLNAT*PSVTQATATSVASK
Trigger: TTTTGAGGCTACTGATGTTGCTGTAGCTTGGGTGACACTAGGGCAGGTAGCATTGAGAACACGGGAGGACAGAAGCCTCAGAAACCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519448.1
CDS GCA 90 bp AAGGCACACAGGAGGCCAGGGAGACTTCTACAGCAACATAATCTCTaGTTAGATTCAACCCTAGGGTTTCTGAGGCTTCTGTCCTCCCGT +
Preference number: 5 (lower is better)
Translates to: KAHRRPGRLLQQHNL*LDSTLGFLRLLSSR
Trigger: ACGGGAGGACAGAAGCCTCAGAAACCCTAGGGTTGAATCTAAGCAGAGATTATGTTGCTGTAGAAGTCTCCCTGGCCTCCTGTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519448.1
CDS CCA 90 bp CCGGAGGACTGTTGTGCCCATTTCTTCTTTTCCTCCTCATGTTGCTaGAGAATTCTGGTTATATCCTTCTGGTGCCGCTCAGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PEDCCAHFFFSSSCC*RILVISFWCRSASS
Trigger: AGAGGAGGCTGAGCGGCACCAGAAGGATATAACCAGAATTCTCCAGCAACATGAGGAGGAAAAGAAGAAATGGGCACAACAGTCCTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CAA 90 bp TCCTGCTGTCTTCTCCAGAAAAACCTTGGAAGGAGCTGTGACTTCAGGCGTCGTATAGCTGTGTCCCCATaGAGGGGACCTAATTCATGG +
Preference number: 5 (lower is better)
Translates to: SCCLLQKNLGRSCDFRRRIAVSP*RGPNSW
Trigger: CCATGAATTAGGTCCCCTCAATGGGGACACAGCTAT...ACGACGCCTGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAAGACAGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGAACTGCTCCATGCCTaGGTTTCCTCATCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWELLHA*VSSSVQ
Trigger: CTGCACAGATGAGGAAACCAAGGCATGGAGCAGTTC...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp CAAGGGAAGACGCTTCTCGGGGCCTCCAAAACCCTGTGGGTGATTCCATGTAACGATCTGTTTGCCATGTaGCCAATGAGGAATAGGAAC +
Preference number: 5 (lower is better)
Translates to: QGKTLLGASKTLWVIPCNDLFAM*PMRNRN
Trigger: GTTCCTATTCCTCATTGGCAACATGGCAAACAGATC...GTTACATGGAATCACCCACAGGGTTTTGGAGGCCCCGAGAAGCGTCTTCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp GCTCTGATAGATGAATGGACTCACAACCACCAAGCTTGCCCCTGTGCCCAGGTGGATGAAAAATGCAGATaGACTGTTCTGACGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ALIDEWTHNHQACPCAQVDEKCR*TVLTLA
Trigger: AGCCAGCGTCAGAACAGTCAATCTGCATTTTTCATC...CACCTGGGCACAGGGGCAAGCTTGGTGGTTGTGAGTCCATTCATCTATCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp CCTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTTCTTATAGTAGGCCCGGAGGACTGTaGTGCCCATTTCTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: PAPRTGWGSHNPGYVSYSRPGGL*CPFLLF
Trigger: GAAAAGAAGAAATGGGCACAACAGTCCTCCGGGCCT...ACTATAAGAAACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS CCA 90 bp TCTTATAGTTTCGGCTCAGAATGGACTCCTCCACCCTCTTCATTTTaGCCTGGAAAGCCTCCAGCTGTGAGGTCAGTCTGTCTATGGTCT +
Preference number: 5 (lower is better)
Translates to: SYSFGSEWTPPPSSF*PGKPPAVRSVCLWS
Trigger: AGACCATAGACAGACTGACCTCACAGCTGGAGGCTTTCCAGGCCAAAATGAAGAGGGTGGAGGAGTCCATTCTGAGCCGAAACTATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
ENST00000522964.1
CDS-3UTR CAA 90 bp CTCCTGCTCCCAGAACTGGCTGGGGCTCCCATAATCCTGGATATGTTTCTTATAATAGCTGTGTCCCCATaGAGGGGACCTAATTCATGG +
Preference number: 5 (lower is better)
Translates to: LLLPELAGAPIILDMFLIIAVSP*RGPNSW
Trigger: CCATGAATTAGGTCCCCTCAATGGGGACACAGCTAT...TATAAGAAACATATCCAGGATTATGGGAGCCCCAGCCAGTTCTGGGAGCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS-3UTR CAA 90 bp CAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGTCTCTGAGGGGATGCACCTaGCCTGGTAAAGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: QVTDLFRCPQITWPPIMSLRGCT*PGKGRG
Trigger: TCCTCTTCCTTTACCAGGCAAGGTGCATCCCCTCAG...AGACATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS TCA 90 bp TTCTCTTTCTGTCCAGCTCATGAATACGCTCATTCTTCATCTCGATaGCAAAGTGTAAGCTCTCCAGCTCCTGCTCCCAGAACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: FSFCPAHEYAHSSSR*QSVSSPAPAPRTGW
Trigger: CCAGCCAGTTCTGGGAGCAGGAGCTGGAGAGCTTACACTTTGTCATCGAGATGAAGAATGAGCGTATTCATGAGCTGGACAGAAAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518189.5
CDS GCA 90 bp TTTTCCTCCTCATGTTGCTGGAGAATTCTGGTTATATCCTTCTGGTaGCGCTCAGCCTCCTCTGATGCACAGAGCTGGACAGTTATAGCT +
Preference number: 5 (lower is better)
Translates to: FSSSCCWRILVISFW*RSASSDAQSWTVIA
Trigger: AGCTATAACTGTCCAGCTCTGTGCATCAGAGGAGGCTGAGCGGCACCAGAAGGATATAACCAGAATTCTCCAGCAACATGAGGAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
ENST00000522964.1
ENST00000524344.5
CDS CCA 90 bp GTTGTGCCCATTTCTTCTTTTCCTCCTCATGTTGCTGGAGAATTCTaGTTATATCCTTCTGGTGCCGCTCAGCCTCCTCTGATGCACAGA +
Preference number: 5 (lower is better)
Translates to: VVPISSFPPHVAGEF*LYPSGAAQPPLMHR
Trigger: TCTGTGCATCAGAGGAGGCTGAGCGGCACCAGAAGGATATAACCAGAATTCTCCAGCAACATGAGGAGGAAAAGAAGAAATGGGCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
ENST00000522964.1
ENST00000524344.5
CDS-3UTR CAA 90 bp CACTCCCCTAGCCTCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACACTTTTCCTCCTCATGTaGCTGGAGAATTCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: HSPSLTSSPIWLWKWRNTLFLLM*LENSGY
Trigger: ATAACCAGAATTCTCCAGCAACATGAGGAGGAAAAG...TGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGAGGCTAGGGGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS CCA 90 bp TTCTTTTCCTCCTCATGTTGCTGGAGAATTCTGGTTATATCCTTCTaGTGCCGCTCAGCCTCCTCTGATGCACAGAGCTGGACAGTTATA +
Preference number: 5 (lower is better)
Translates to: FFSSSCCWRILVISF*CRSASSDAQSWTVI
Trigger: TATAACTGTCCAGCTCTGTGCATCAGAGGAGGCTGAGCGGCACCAGAAGGATATAACCAGAATTCTCCAGCAACATGAGGAGGAAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
ENST00000522964.1
ENST00000524344.5
CDS-3UTR CAA 90 bp AGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCTTCTTGATAGCTGTGTCCCCATaGAGGGGACCTAATTCATGG +
Preference number: 5 (lower is better)
Translates to: RSFVQRGLGEAGYLAPFLIAVSP*RGPNSW
Trigger: CCATGAATTAGGTCCCCTCAATGGGGACACAGCTAT...CAAGAAGGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp AGGGACAGAAGCTTTGTTCAAAGAGGTTTGGGAGAGGCTGGATACTTAGCTCCCTTCCTTCTCCACCTGTaGTGCCCATTTCTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: RDRSFVQRGLGEAGYLAPFLLHL*CPFLLF
Trigger: GAAAAGAAGAAATGGGCACAACAGGTGGAGAAGGAA...GGGAGCTAAGTATCCAGCCTCTCCCAAACCTCTTTGAACAAAGCTTCTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp TCACCTCTTCCCCCATTTGGCTGTGGAAATGGAGAAACACAGTCACCTCTGAACTTCTCCAGAAAAACCTaGGAAGGAGCTGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: SPLPPFGCGNGETQSPLNFSRKT*EGAVTS
Trigger: TGAAGTCACAGCTCCTTCCAAGGTTTTTCTGGAGAA...GTTCAGAGGTGACTGTGTTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGGAACTGCTCCATGCCTaGGTTTCCTCATCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMELLHA*VSSSVQ
Trigger: CTGCACAGATGAGGAAACCAAGGCATGGAGCAGTTC...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp TTCATGAAAAAGTACACATGTGATTCCCTCCAGGGCTTTCCTCGAGGCTCCTGGGATCTGTTTGCCATGTaGCCAATGAGGAATAGGAAC +
Preference number: 5 (lower is better)
Translates to: FMKKYTCDSLQGFPRGSWDLFAM*PMRNRN
Trigger: GTTCCTATTCCTCATTGGCAACATGGCAAACAGATC...CCAGGAGCCTCGAGGAAAGCCCTGGAGGGAATCACATGTGTACTTTTTCATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS TCA 90 bp TTCTCTTTCACTGTTTCCATGAGGATCAGCCGCCTGTCCAGCTCATaGATACGCTCATTCTTCATCTCGATGACAAAGTGTAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: FSFTVSMRISRLSSS*IRSFFISMTKCKLS
Trigger: GGAGAGCTTACACTTTGTCATCGAGATGAAGAATGAGCGTATTCATGAGCTGGACAGGCGGCTGATCCTCATGGAAACAGTGAAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000521308.5
CDS GCA 90 bp TTCTATAACAATGAGAATGAGCTCAGAAAGCTGCCAAACTCACGCTaGACGATGTGTGCTGTCACCTCCCTCTTATCTGTGGTCACTGAA +
Preference number: 5 (lower is better)
Translates to: FYNNENELRKLPNSR*TMCAVTSLLSVVTE
Trigger: TTCAGTGACCACAGATAAGAGGGAGGTGACAGCACACATCGTGCAGCGTGAGTTTGGCAGCTTTCTGAGCTCATTCTCATTGTTATAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519448.1
CDS-3UTR CAA 90 bp ATTCAGGTCACTGATCTGTTTAGGTGTCCCCAAATAACTTGGCCACCAATCATGCACCTCTTCCCCCATTaGGCTGTGGAAATGGAGAAA +
Preference number: 5 (lower is better)
Translates to: IQVTDLFRCPQITWPPIMHLFPH*AVEMEK
Trigger: TTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTG...CATGATTGGTGGCCAAGTTATTTGGGGACACCTAAACAGATCAGTGACCTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp AAAGCCTTTGATGCAAATGCTCTATGCAGAACAGGAGTTATAATTATAGTCTCCTCGGAACTTCTCGGATaGGGACAGAGTGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: KAFDANALCRTGVIIIVSSELLG*GQSAGA
Trigger: TGCCCCAGCACTCTGTCCCAATCCGAGAAGTTCCGA...GGAGACTATAATTATAACTCCTGTTCTGCATAGAGCATTTGCATCAAAGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS CCA 90 bp CAAACTCACGCTGCACGATGTGTGCTGTCACCTCCCTCTTATCTGTaGTCACTGAAAGCACTGATTCATTCTAGACTAGATGTTACATTT +
Preference number: 5 (lower is better)
Translates to: QTHAARCVLSPPSYL*SLKALIHSRLDVTF
Trigger: AAATGTAACATCTAGTCTAGAATGAATCAGTGCTTTCAGTGACCACAGATAAGAGGGAGGTGACAGCACACATCGTGCAGCGTGAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519448.1
CDS-3UTR CAA 90 bp AAAGCCTTTGATGCAAATGCTCTATGCAGAACAGGAGTTATAATTATAGTCTCCCACCTCTTCCCCCATTaGGCTGTGGAAATGGAGAAA +
Preference number: 5 (lower is better)
Translates to: KAFDANALCRTGVIIIVSHLFPH*AVEMEK
Trigger: TTTCTCCATTTCCACAGCCAAATGGGGGAAGAGGTG...GGAGACTATAATTATAACTCCTGTTCTGCATAGAGCATTTGCATCAAAGGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS-3UTR CAA 90 bp AAAGCCTTTGATGCAAATGCTCTATGCAGAACAGGAGTTATAATTATAGTCTCCTTCCTTCTCCACCTGTaGTGCCCATTTCTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: KAFDANALCRTGVIIIVSFLLHL*CPFLLF
Trigger: GAAAAGAAGAAATGGGCACAACAGGTGGAGAAGGAA...GGAGACTATAATTATAACTCCTGTTCTGCATAGAGCATTTGCATCAAAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355417.7
ENST00000518189.5
CDS CCA 72 bp GGCTCTGGTCTGGGTGGCTGTTCTGGTTCTGGTTCTTaGCGCTTCTTTTTCGGGGGTTTGCAGCTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: GSGLGGCSGSGS*RFFFGGLQLLS
Trigger: GCTGAGCAGCTGCAAACCCCCGAAAAAGAAGCGCCAAGAACCAGAACCAGAACAGCCACCCAGACCAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355417.7
CDS CCA 72 bp TTCTGGTGCCGCTCAGCCTCCTCTGATGCACAGAGCTaGACAGTTATAGCTGTGTCCCCATTGAGGGGACCT +
Preference number: 6 (lower is better)
Translates to: FWCRSASSDAQS*TVIAVSPLRGP
Trigger: AGGTCCCCTCAATGGGGACACAGCTATAACTGTCCAGCTCTGTGCATCAGAGGAGGCTGAGCGGCACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000522964.1
ENST00000524344.5
CDS GCA 72 bp TGCAGGGCCTCTTCATTCTTTCCTTCCAGGACCCTTTaGTGCTCATCCAGTCTGTCTCGAAGCTCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: CRASSFFPSRTL*CSSSLSRSSSS
Trigger: GGAGCTAGAGCTTCGAGACAGACTGGATGAGCAGCAAAGGGTCCTGGAAGGAAAGAATGAAGAGGCCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
ENST00000524344.5
CDS GCA 72 bp CTGAGGCTTCTGTCCTCCCGTGTTCTCAATGCTACCTaGCCTAGTGTCACCCAAGCTACAGCAACATCAGTA +
Preference number: 6 (lower is better)
Translates to: LRLLSSRVLNAT*PSVTQATATSV
Trigger: TACTGATGTTGCTGTAGCTTGGGTGACACTAGGGCAGGTAGCATTGAGAACACGGGAGGACAGAAGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519448.1
CDS GCA 72 bp ACCACCTTGGCCAGTGGAACATCTCTACCCTTACCTTaGAGGGCCTCTTCATTCTTTCCTTCCAGGACCCTT +
Preference number: 6 (lower is better)
Translates to: TTLASGTSLPLP*RASSFFPSRTL
Trigger: AAGGGTCCTGGAAGGAAAGAATGAAGAGGCCCTGCAAGGTAAGGGTAGAGATGTTCCACTGGCCAAGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524344.5
CDS CCA 72 bp TCCTCATGTTGCTGGAGAATTCTGGTTATATCCTTCTaGTGCCGCTCAGCCTCCTCTGATGCACAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SSCCWRILVISF*CRSASSDAQSW
Trigger: CCAGCTCTGTGCATCAGAGGAGGCTGAGCGGCACCAGAAGGATATAACCAGAATTCTCCAGCAACATGAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
ENST00000522964.1
ENST00000524344.5
CDS CCA 72 bp GGCTCTGGTCTGGGTGGCTGTTCTGGTTCTGGTTCTTaGCGCTTCTTCAAATGGCACGCAAGAAGATCAGTT +
Preference number: 6 (lower is better)
Translates to: GSGLGGCSGSGS*RFFKWHARRSV
Trigger: AACTGATCTTCTTGCGTGCCATTTGAAGAAGCGCCAAGAACCAGAACCAGAACAGCCACCCAGACCAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522179.1
CDS CAA 90 bp AGGCCCGGAGGACTGTTGTGCCCATTTCTTCTTTTCCTCCTCATGTaGCTGGAGAATTCTGGTTATATCCTTCTGGTGCCGCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: RPGGLLCPFLLFLLM*LENSGYILLVPLSL
Trigger: GAGGCTGAGCGGCACCAGAAGGATATAACCAGAATTCTCCAGCAACATGAGGAGGAAAAGAAGAAATGGGCACAACAGTCCTCCGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522964.1
CDS TCA 72 bp GAAAGAGTGGGTAAGCGCTTCTTTCTCCTGTTCATATaGGGCCCGGAGGACTTGCAGGGCCTCTTCATTCTT +
Preference number: 6 (lower is better)
Translates to: ERVGKRFFLLFI*GPEDLQGLFIL
Trigger: AAGAATGAAGAGGCCCTGCAAGTCCTCCGGGCCTCATATGAACAGGAGAAAGAAGCGCTTACCCACTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
CDS GCA 72 bp TCATGTTGCTGGAGAATTCTGGTTATATCCTTCTGGTaGCGCTCAGCCTCCTCTGATGCACAGAGCTGGACA +
Preference number: 6 (lower is better)
Translates to: SCCWRILVISFW*RSASSDAQSWT
Trigger: TGTCCAGCTCTGTGCATCAGAGGAGGCTGAGCGGCACCAGAAGGATATAACCAGAATTCTCCAGCAACATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355417.7
ENST00000518189.5
ENST00000521308.5
ENST00000522964.1
ENST00000524344.5
CDS CAA 72 bp CCCTCTAGGGCCAAGGATCCTGTAGATTTGAGTCAATaGCTTGTGGATCAGACAGACAGGGAGGGAACAGTG +
Preference number: 6 (lower is better)
Translates to: PSRAKDPVDLSQ*LVDQTDREGTV
Trigger: CACTGTTCCCTCCCTGTCTGTCTGATCCACAAGCAATTGACTCAAATCTACAGGATCCTTGGCCCTAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524344.5
CDS GCA 72 bp AATGAGAATGAGCTCAGAAAGCTGCCAAACTCACGCTaGACGATGTGTGCTGTCACCTCCCTCTTATCTGTG +
Preference number: 6 (lower is better)
Translates to: NENELRKLPNSR*TMCAVTSLLSV
Trigger: CACAGATAAGAGGGAGGTGACAGCACACATCGTGCAGCGTGAGTTTGGCAGCTTTCTGAGCTCATTCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519448.1
CDS GCA 72 bp AGGAGGCCAGGGAGACTTCTACAGCAACATAATCTCTaGTTAGATTCAACCCTAGGGTTTCTGAGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: RRPGRLLQQHNL*LDSTLGFLRLL
Trigger: CAGAAGCCTCAGAAACCCTAGGGTTGAATCTAAGCAGAGATTATGTTGCTGTAGAAGTCTCCCTGGCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519448.1