RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC62 (Homo sapiens)

Ensembl gene IDs: ENSG00000130783

Ensembl transcript IDs: ENST00000253079.11, ENST00000341952.8, ENST00000392440.3, ENST00000392441.8, ENST00000537566.5, ENST00000539171.1

Found 442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTTTGTTTGTGTCAGTAGGTGGGACTAATATAGACCCAGAAAGATaGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTC +
Preference number: 1 (lower is better)
Translates to: LLFVSVGGTNIDPER*GSAQLGTEGPRAIF
Trigger: GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCCACCTACTGACACAAACAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
3UTR-3UTR TCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTGATCACGATGAATACTaGAGTTGCCTTTTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFDHDEY*SCLLFP
Trigger: AGGAAACAAAAGGCAACTTCAGTATTCATCGTGATC...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000537566.5
3UTR-3UTR TCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGGATCACGATGAATACTaGAGTTGCCTTTTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQDHDEY*SCLLFP
Trigger: AGGAAACAAAAGGCAACTTCAGTATTCATCGTGATC...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000537566.5
3UTR-3UTR GCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCAAACAGCACTTTCTATaGAGGGTTCTTTCTCTATTT +
Preference number: 2 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFKQHFL*RVLSLF
Trigger: AAATAGAGAAAGAACCCTGCATAGAAAGTGCTGTTT...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
3UTR-3UTR GCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTAAACAGCACTTTCTATaGAGGGTTCTTTCTCTATTT +
Preference number: 2 (lower is better)
Translates to: KDGALLSLGQKDLELFSSKQHFL*RVLSLF
Trigger: AAATAGAGAAAGAACCCTGCATAGAAAGTGCTGTTT...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
3UTR-3UTR GCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTAAACAGCACTTTCTATaGAGGGTTCTTTCTCTATTT +
Preference number: 2 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFKQHFL*RVLSLF
Trigger: AAATAGAGAAAGAACCCTGCATAGAAAGTGCTGTTT...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
3UTR-3UTR TCA 90 bp AAAGCACGCATTGATAAAGAACATAACCAAACCTCACCCAACTTCTCTTTTCAGCATGAAAATCATCTCTaGAGTAACACTGAGACCTGT +
Preference number: 2 (lower is better)
Translates to: KARIDKEHNQTSPNFSFQHENHL*SNTETC
Trigger: ACAGGTCTCAGTGTTACTTCAGAGATGATTTTCATG...CTGAAAAGAGAAGTTGGGTGAGGTTTGGTTATGTTCTTTATCAATGCGTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253079.11
3UTR-3UTR GCA 90 bp AGGGAGAAAGCACGCATTGATAAAGAACATAACCAAACCTCACCCAACTTCTCTAAACAGCACTTTCTATaGAGGGTTCTTTCTCTATTT +
Preference number: 2 (lower is better)
Translates to: REKARIDKEHNQTSPNFSKQHFL*RVLSLF
Trigger: AAATAGAGAAAGAACCCTGCATAGAAAGTGCTGTTT...AGAGAAGTTGGGTGAGGTTTGGTTATGTTCTTTATCAATGCGTGCTTTCTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR CCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTCCGCCAGCAAACGCTaGAGCTTGCTCGTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSSASKR*SLLVGE
Trigger: CTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGA...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTCTGACCCGATGTTCTaGCGCCCGGCAAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSSDPMF*RPARKA
Trigger: AGCCTTCCTTGCCGGGCGCCAGAACATCGGGTCAGA...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR CCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCTCCGCCAGCAAACGCTaGAGCTTGCTCGTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSSASKR*SLLVGE
Trigger: CTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGA...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTGGTGGGCCGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVGGPIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCGGCCCACC...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS-3UTR CCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCGGAGAAGCCCGGTGTaGGCGGCGTCACCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVRRSPV*AASPQK
Trigger: TTTCTGAGGTGACGCCGCCCACACCGGGCTTCTCCG...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR TCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTGGCAGGAGAACTGCTTaGACCCTGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFGRRTA*TLEAEV
Trigger: AACCTCTGCCTCCAGGGTTCAAGCAGTTCTCCTGCC...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS-3UTR GCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCCCGGCAAGGAAGGCTaGCGGAGGGTTCATAGGTGT +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVPGKEG*RRVHRC
Trigger: ACACCTATGAACCCTCCGGCAGCCTTCCTTGCCGGG...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR CCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCGCTGGAGCTTGCTCGTaGGCGAGAAATCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSAGACS*ARNHPG
Trigger: CCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGC...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTGGGCTCTGCTCAGCTTaGGACAGAAGGACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSGLCSA*DRRTSS
Trigger: GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCGAGACCAGCCTaGCCAACGTGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSSSRPA*PTWQNP
Trigger: GGGGTTTTGCCACGTTGGCCAGGCTGGTCTCGAACT...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS-3UTR TCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCCTGGGGCTTCAATTATaGAGTTACTCGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSLGLQL*SYSGGS
Trigger: GCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAG...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTAGGTCCGTCACCATCTaGCGAGATTCCGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFRSVTI*RDSASK
Trigger: TTTGCTGGCGGAATCTCGTCAGATGGTGACGGACCT...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTCCCGGCAAGGAAGGCTaGCGGAGGGTTCATAGGTGT +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFPGKEG*RRVHRC
Trigger: ACACCTATGAACCCTCCGGCAGCCTTCCTTGCCGGG...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR GCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCACTTGGAGTCACACATaGCACTTTCGCCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSTWSHT*HFRPDR
Trigger: CCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGT...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTGGAAATCTCAACTTCTaGCCCGATGTTCTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSGNLNF*PDVLAP
Trigger: GGGCGCCAGAACATCGGGTCAGAAGTTGAGATTTCC...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR TCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCTGGGGCTTCAATTATaGAGTTACTCGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFLGLQL*SYSGGS
Trigger: GCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAG...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCCTGGGGCTTCAATTATaGAGTTACTCGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSLGLQL*SYSGGS
Trigger: GCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAG...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCGCCACAGATGCTTTCTaGACAGGTGCACCCAGATTT +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSATDAF*TGAPRF
Trigger: AAATCTGGGTGCACCTGTTCAGAAAGCATCTGTGGC...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTAGGTCCGTCACCATCTaGCGAGATTCCGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSRSVTI*RDSASK
Trigger: TTTGCTGGCGGAATCTCGTCAGATGGTGACGGACCT...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTACTTGGAGTCACACATaGCACTTTCGCCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFTWSHT*HFRPDR
Trigger: CCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGT...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTAAGTCTCCGCCATCTTaGCATCACGTAGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFKSPPS*HHVGHA
Trigger: AGCATGCCCTACGTGATGCCAAGATGGCGGAGACTT...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCTCGGGTGGCAGCACTTaGAGTCACACATGCCACTTT +
Preference number: 4 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFSGGST*SHTCHF
Trigger: AAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGA...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTTCGGGTGGCAGCACTTaGAGTCACACATGCCACTTT +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFSGGST*SHTCHF
Trigger: AAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGA...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTCCACGTCAGACATGTaGCCTGGGGCTTCAATTATG +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSSTSDM*PGASIM
Trigger: CATAATTGAAGCCCCAGGCCACATGTCTGACGTGGA...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTGCTGGAGCTTGCTCGTaGGCGAGAAATCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFAGACS*ARNHPG
Trigger: CCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGC...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCATAGACCCAGAAAGATaGGGCTCTGCTCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFIDPER*GSAQLG
Trigger: CCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTAT...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTGGAAATCTCAACTTCTaGCCCGATGTTCTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFGNLNF*PDVLAP
Trigger: GGGCGCCAGAACATCGGGTCAGAAGTTGAGATTTCC...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR TCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAGGCCCAGGTAAACACTaGCATCATGCCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGGPGKH*HHATAS
Trigger: AGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCC...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTGGCCCAGGTAAACACTaGCATCATGCCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVGPGKH*HHATAS
Trigger: AGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCC...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACTGGGGCTTCAATTATaGAGTTACTCGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGLGLQL*SYSGGS
Trigger: GCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAG...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAAGGTGCACCCAGATTTaGGGCGGACAATTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGRCTQI*GGQFSA
Trigger: TGCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCT...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCGCCACAGATGCTTTCTaGACAGGTGCACCCAGATTT +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSATDAF*TGAPRF
Trigger: AAATCTGGGTGCACCTGTTCAGAAAGCATCTGTGGC...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTAGGTCCGTCACCATCTaGCGAGATTCCGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFRSVTI*RDSASK
Trigger: TTTGCTGGCGGAATCTCGTCAGATGGTGACGGACCT...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGCTGTTGCTGGTGCACTaGAACCATGTCATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQLLLVH*NHVIEL
Trigger: GAGCTCAATGACATGGTTGCAGTGCACCAGCAACAG...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCGTTGTGTGCCACAGATaGTTTCTGAACAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFVVCHR*FLNRCT
Trigger: GGTGCACCTGTTCAGAAAGCATCTGTGGCACACAAC...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTGTTGTGTGCCACAGATaGTTTCTGAACAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFVVCHR*FLNRCT
Trigger: GGTGCACCTGTTCAGAAAGCATCTGTGGCACACAAC...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGCAAACGCTGGAGCTTaGTCGTGGGCGAGAAATCAT +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPANAGA*SWARNH
Trigger: ATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGC...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAGCAAACGCTGGAGCTTaGTCGTGGGCGAGAAATCAT +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGANAGA*SWARNH
Trigger: ATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGC...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTGCAAACGCTGGAGCTTaGTCGTGGGCGAGAAATCAT +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVANAGA*SWARNH
Trigger: ATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGC...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTAGAAAGATGGGGCTCTaGTCAGCTTGGGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSRKMGL*SAWDRR
Trigger: CCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTAAGTCTCCGCCATCTTaGCATCACGTAGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSKSPPS*HHVGHA
Trigger: AGCATGCCCTACGTGATGCCAAGATGGCGGAGACTT...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCGGGTGGCAGCACTTaGAGTCACACATGCCACTTT +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSSGGST*SHTCHF
Trigger: AAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGA...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCATGAAGTTACTCGGGTaGCAGCACTTGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFMKLLG*QHLESH
Trigger: GTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCAT...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTATGAAGTTACTCGGGTaGCAGCACTTGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFMKLLG*QHLESH
Trigger: GTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCAT...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCAGTGGGAATCTTGGATaGCAATTAGCTCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSSGNLG*QLAHLP
Trigger: CGGCAAGTGAGCTAATTGCCATCCAAGATTCCCACT...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTATAGACCCAGAAAGATaGGGCTCTGCTCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVIDPER*GSAQLG
Trigger: CCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTAT...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAATAGACCCAGAAAGATaGGGCTCTGCTCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPIDPER*GSAQLG
Trigger: CCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTAT...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCGCAAGAGCTCTTGTCTaGCCTATTTTGCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSARALV*PILLNQ
Trigger: TTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGC...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTGGCCCAGGTAAACACTaGCATCATGCCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFGPGKH*HHATAS
Trigger: AGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCC...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAGCCACAGATGCTTTCTaGACAGGTGCACCCAGATTT +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGATDAF*TGAPRF
Trigger: AAATCTGGGTGCACCTGTTCAGAAAGCATCTGTGGC...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTCTCCAATGAGCAACTaGAGCTCCTTCCGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQSPMSN*SSFRCF
Trigger: GAAACAACGGAAGGAGCTGCAGTTGCTCATTGGAGA...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCTGTTGCTGGTGCACTaGAACCATGTCATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVLLLVH*NHVIEL
Trigger: GAGCTCAATGACATGGTTGCAGTGCACCAGCAACAG...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGAAGCTGTTGCTGGTaGACTGCAACCATGTCATTG +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSRSCCW*TATMSL
Trigger: CAATGACATGGTTGCAGTGCACCAGCAACAGCTTCT...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCATAAACACATGTCTCTaGTGGAGTCCAGAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSINTCL*WSPEPL
Trigger: CAAAGGCTCTGGACTCCAGCAGAGACATGTGTTTAT...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCCGTTCTGAACCCCAGTaGCATGACATTTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSRSEPQ*HDILVI
Trigger: AATCACCAAAATGTCATGGCACTGGGGTTCAGAACG...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTGTGTGCCACAGATaGTTTCTGAACAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPVVCHR*FLNRCT
Trigger: GGTGCACCTGTTCAGAAAGCATCTGTGGCACACAAC...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTGGGAGTCATGTTGTGTaGCACAGATGCTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFGSHVV*HRCFLN
Trigger: GTTCAGAAAGCATCTGTGGCACACAACATGACTCCC...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCCGGAGAAGCCCGGTGTaGGCGGCGTCACCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFRRSPV*AASPQK
Trigger: TTTCTGAGGTGACGCCGCCCACACCGGGCTTCTCCG...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
CDS-3UTR CCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTTTTCGGGTTCAATCTaGGTTTTTCCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSFSGSI*VFPPRD
Trigger: GTCTCTGGGAGGAAAAACCCAGATTGAACCCGAAAA...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCTCCGCCAGCAAACGCTaGAGCTTGCTCGTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFSASKR*SLLVGE
Trigger: CTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGA...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTGCAAGAGCTCTTGTCTaGCCTATTTTGCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFARALV*PILLNQ
Trigger: TTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGC...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTAGAAGCTGTTGCTGGTaGACTGCAACCATGTCATTG +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSRSCCW*TATMSL
Trigger: CAATGACATGGTTGCAGTGCACCAGCAACAGCTTCT...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTCATGAAAGAAGCTGTTaGTGGTGCACTGCAACCATG +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSHERSC*WCTATM
Trigger: CATGGTTGCAGTGCACCAGCAACAGCTTCTTTCATG...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACATGAAAGAAGCTGTTaGTGGTGCACTGCAACCATG +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGHERSC*WCTATM
Trigger: CATGGTTGCAGTGCACCAGCAACAGCTTCTTTCATG...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCAGGCAACTTTTCTCTTaGTTGAGGCGAATGATCTCT +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSRQLFS*LRRMIS
Trigger: AGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCT...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR GCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCAGGCGGACAATTCTCTaGATTTTGGAAGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSRRTIL*ILEGLK
Trigger: TTTCAAGCCTTCCAAAATGCAGAGAATTGTCCGCCT...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAGAAAGAAGCTGTTGCTaGTGCACTGCAACCATGTCA +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGERSCC*CTATMS
Trigger: TGACATGGTTGCAGTGCACCAGCAACAGCTTCTTTC...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCAACACATGTCTCTGCTaGAGTCCAGAGCCTTTGATT +
Preference number: 4 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFNTCLC*SPEPLI
Trigger: AATCAAAGGCTCTGGACTCCAGCAGAGACATGTGTT...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTTCGGGTTCAATCTaGGTTTTTCCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQFSGSI*VFPPRD
Trigger: GTCTCTGGGAGGAAAAACCCAGATTGAACCCGAAAA...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCCAGGCTTCATTTTTCTaGCAGCATGAGATTTCGGAC +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSQASFF*QHEISD
Trigger: GTCCGAAATCTCATGCTGCCAGAAAAATGAAGCCTG...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGGCTTCATTTTTCTaGCAGCATGAGATTTCGGAC +
Preference number: 4 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFQASFF*QHEISD
Trigger: GTCCGAAATCTCATGCTGCCAGAAAAATGAAGCCTG...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCAGGCTTCATTTTTCTaGCAGCATGAGATTTCGGAC +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFQASFF*QHEISD
Trigger: GTCCGAAATCTCATGCTGCCAGAAAAATGAAGCCTG...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTATGAAGTTACTCGGGTaGCAGCACTTGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFMKLLG*QHLESH
Trigger: GTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCAT...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGGTCAGACATGTGGCCTaGGGCTTCAATTATGAAGTT +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQVRHVA*GFNYEV
Trigger: AACTTCATAATTGAAGCCCCAGGCCACATGTCTGAC...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCGTCAGACATGTGGCCTaGGGCTTCAATTATGAAGTT +
Preference number: 4 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFVRHVA*GFNYEV
Trigger: AACTTCATAATTGAAGCCCCAGGCCACATGTCTGAC...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTTCCACGTCAGACATGTaGCCTGGGGCTTCAATTATG +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFSTSDM*PGASIM
Trigger: CATAATTGAAGCCCCAGGCCACATGTCTGACGTGGA...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTAGTGGGAATCTTGGATaGCAATTAGCTCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSSGNLG*QLAHLP
Trigger: CGGCAAGTGAGCTAATTGCCATCCAAGATTCCCACT...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCGGGCTCTGCTCAGCTTaGGACAGAAGGACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFGLCSA*DRRTSS
Trigger: GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCTGCAACCATGTCATTaGGCTCTTTATCTCGATCTT +
Preference number: 4 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFLQPCH*ALYLDL
Trigger: AAGATCGAGATAAAGAGCTCAATGACATGGTTGCAG...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCCTGTCGTCTTTTCATTaGGGTCCTCTTTTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSLSSFH*GPLLVC
Trigger: ACAAACTAAAAGAGGACCTCAATGAAAAGACGACAG...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR TCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGCAAGAGCTCTTGTCTaGCCTATTTTGCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPARALV*PILLNQ
Trigger: TTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGC...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGATTTTTCTGGCAGCATaGGATTTCGGACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQIFLAA*DFGPFH
Trigger: ATGGAAAGGTCCGAAATCTCATGCTGCCAGAAAAAT...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTATTAAAAAGGCTAAATaGGGTGGCTCTTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFIKKAK*GGSSPL
Trigger: GAGCGGGGAAGAGCCACCTCATTTAGCCTTTTTAAT...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR GCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTAAGAGAAGAATGCGTTaGCTTTTGAGCCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFKRRMR*LLSHFL
Trigger: CAGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTT...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR GCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTTTACCCGAACAATCTaGAATGTGATTAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSFTRTI*NVINCL
Trigger: GAGGCAGTTAATCACATTGCAGATTGTTCGGGTAAA...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR GCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAATAAACACATGTCTCTaGTGGAGTCCAGAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGINTCL*WSPEPL
Trigger: CAAAGGCTCTGGACTCCAGCAGAGACATGTGTTTAT...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCCTGACATCATGCCACTaGTTCTCATCAGATAAAGTG +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSLTSCH*FSSDKV
Trigger: CACTTTATCTGATGAGAAGCAGTGGCATGATGTCAG...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCTGACATCATGCCACTaGTTCTCATCAGATAAAGTG +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFLTSCH*FSSDKV
Trigger: CACTTTATCTGATGAGAAGCAGTGGCATGATGTCAG...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTGGGAGTCATGTTGTGTaGCACAGATGCTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFGSHVV*HRCFLN
Trigger: GTTCAGAAAGCATCTGTGGCACACAACATGACTCCC...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTAACACATGTCTCTGCTaGAGTCCAGAGCCTTTGATT +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVNTCLC*SPEPLI
Trigger: AATCAAAGGCTCTGGACTCCAGCAGAGACATGTGTT...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTTTTCGGGTTCAATCTaGGTTTTTCCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVFSGSI*VFPPRD
Trigger: GTCTCTGGGAGGAAAAACCCAGATTGAACCCGAAAA...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTCTCATCAGATAAAGTaGGTGTTTCTGAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSSHQIK*VFLRVV
Trigger: AACAACCCTCAGAAACACCCACTTTATCTGATGAGA...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCACAGGCTTCATTTTTCTaGCAGCATGAGATTTCGGAC +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPQASFF*QHEISD
Trigger: GTCCGAAATCTCATGCTGCCAGAAAAATGAAGCCTG...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTGTCAGACATGTGGCCTaGGGCTTCAATTATGAAGTT +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVVRHVA*GFNYEV
Trigger: AACTTCATAATTGAAGCCCCAGGCCACATGTCTGAC...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCAAAGAGTGGGAATCTTaGATGGCAATTAGCTCACTT +
Preference number: 4 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSKEWES*MAISSL
Trigger: AAGTGAGCTAATTGCCATCCAAGATTCCCACTCTTT...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTGAAGAACCCAAAGAGTaGGAATCTTGGATGGCAATT +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFEEPKE*ESWMAI
Trigger: AATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTC...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCGAAGAACCCAAAGAGTaGGAATCTTGGATGGCAATT +
Preference number: 4 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFEEPKE*ESWMAI
Trigger: AATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTC...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCGAAGAACCCAAAGAGTaGGAATCTTGGATGGCAATT +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSEEPKE*ESWMAI
Trigger: AATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTC...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AAAGCACGCATTGATAAAGAACATAACCAAACCTCACCCAACTTCTCTTTTCAGTCCGCCAGCAAACGCTaGAGCTTGCTCGTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: KARIDKEHNQTSPNFSFQSASKR*SLLVGE
Trigger: CTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGA...CTGAAAAGAGAAGTTGGGTGAGGTTTGGTTATGTTCTTTATCAATGCGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR TCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGCTGTCGTCTTTTCATTaGGGTCCTCTTTTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQLSSFH*GPLLVC
Trigger: ACAAACTAAAAGAGGACCTCAATGAAAAGACGACAG...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR TCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTATTTTTCTGGCAGCATaGGATTTCGGACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVIFLAA*DFGPFH
Trigger: ATGGAAAGGTCCGAAATCTCATGCTGCCAGAAAAAT...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTCACCTTCTAATTTGCTaGAACGTTCTTCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSHLLIC*NVLPVS
Trigger: TGACACTGGAAGAACGTTGCAGCAAATTAGAAGGTG...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTGTTCACCTTCTAATTTaGTGCAACGTTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSVHLLI*CNVLPV
Trigger: CACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAAC...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCACCTTCTAATTTaGTGCAACGTTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPVHLLI*CNVLPV
Trigger: CACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAAC...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTAGGCAACTTTTCTCTTaGTTGAGGCGAATGATCTCT +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVRQLFS*LRRMIS
Trigger: AGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCT...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR GCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAAGGCAACTTTTCTCTTaGTTGAGGCGAATGATCTCT +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPRQLFS*LRRMIS
Trigger: AGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCT...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR GCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTAAAAGCAATTCATCGTaGAGGCAACTTTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFKSNSS*RQLFSC
Trigger: GCAAGAGAAAAGTTGCCTGCACGATGAATTGCTTTT...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR GCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCGTTGTTTCTTCTCTTTaGATTCATCGCAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSVVSSL*IHRKSS
Trigger: AGAGCTCTTGCGATGAATGCAAAGAGAAGAAACAAC...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGGTTGTTTCTTCTCTTTaGATTCATCGCAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQVVSSL*IHRKSS
Trigger: AGAGCTCTTGCGATGAATGCAAAGAGAAGAAACAAC...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCTGACATCATGCCACTaGTTCTCATCAGATAAAGTG +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVLTSCH*FSSDKV
Trigger: CACTTTATCTGATGAGAAGCAGTGGCATGATGTCAG...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAAGGCGGACAATTCTCTaGATTTTGGAAGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPRRTIL*ILEGLK
Trigger: TTTCAAGCCTTCCAAAATGCAGAGAATTGTCCGCCT...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCTTTGCTGAACCAACATaGCTTCAAATTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSFAEPT*LQISGP
Trigger: AGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAA...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTGCTGAACCAACATaGCTTCAAATTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQFAEPT*LQISGP
Trigger: AGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAA...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCGTGAGTTCTTTTTATTaGAAGAGGACTCCGTCTCAT +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSVSSFY*KRTPSH
Trigger: ATGAGACGGAGTCCTCTTCCAATAAAAAGAACTCAC...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGGTGAGTTCTTTTTATTaGAAGAGGACTCCGTCTCAT +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQVSSFY*KRTPSH
Trigger: ATGAGACGGAGTCCTCTTCCAATAAAAAGAACTCAC...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCTCCGCCAGCAAACGCTaGAGCTTGCTCGTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFSASKR*SLLVGE
Trigger: CTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGA...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCGTTTGGCATTCCATTTaGTTGGATTCAAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QKDGALLSLGQKDLELFSVWHSI*LDSRAF
Trigger: AAAAGCTCTTGAATCCAATCAAATGGAATGCCAAAC...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGATGTGCGTTCTTGCTTTaGCTTCGCAATATTAAGCAA +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGCAFLL*LRNIKQ
Trigger: TTGCTTAATATTGCGAAGTCAAAGCAAGAACGCACA...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTGTGCGTTCTTGCTTTaGCTTCGCAATATTAAGCAA +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVCAFLL*LRNIKQ
Trigger: TTGCTTAATATTGCGAAGTCAAAGCAAGAACGCACA...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCATCTGACCTATTTTGCTaGACCAACATGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPSDLFC*TNMASN
Trigger: ATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGA...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCGGCCCAGGTAAACACTaGCATCATGCCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFGPGKH*HHATAS
Trigger: AGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCC...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGGTGCACCCAGATTTaGGGCGGACAATTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFRCTQI*GGQFSA
Trigger: TGCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCT...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCATTGAAGCCTTTTCATTaGATGCTGGTGCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPLKPFH*MLVHLC
Trigger: ACAAAGATGCACCAGCATTCAATGAAAAGGCTTCAA...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTGAAGCCTTTTCATTaGATGCTGGTGCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSLKPFH*MLVHLC
Trigger: ACAAAGATGCACCAGCATTCAATGAAAAGGCTTCAA...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTAAAAGCAATTCATCGTaGAGGCAACTTTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVKSNSS*RQLFSC
Trigger: GCAAGAGAAAAGTTGCCTGCACGATGAATTGCTTTT...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR GCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAATCTGTCTCAGATTGTaGAGTTCTGAATTTGTGCGT +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPICLRL*SSEFVR
Trigger: ACGCACAAATTCAGAACTGCACAATCTGAGACAGAT...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTATCTGTCTCAGATTGTaGAGTTCTGAATTTGTGCGT +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVICLRL*SSEFVR
Trigger: ACGCACAAATTCAGAACTGCACAATCTGAGACAGAT...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTGTTGTTTCTTCTCTTTaGATTCATCGCAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVVVSSL*IHRKSS
Trigger: AGAGCTCTTGCGATGAATGCAAAGAGAAGAAACAAC...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCGCAAACGCTGGAGCTTaGTCGTGGGCGAGAAATCAT +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFANAGA*SWARNH
Trigger: ATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGC...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGAACAACCCTTTTCTCTaGCAGTCAATAACATTATCC +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQNNPFL*QSITLS
Trigger: GGATAATGTTATTGACTGGCAGAGAAAAGGGTTGTT...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS-3UTR CCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGCGGAGAAGCCCGGTGTaGGCGGCGTCACCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKRRSPV*AASPQK
Trigger: TTTCTGAGGTGACGCCGCCCACACCGGGCTTCTCCG...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
CDS-3UTR CCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCATTTGCTGAACCAACATaGCTTCAAATTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPFAEPT*LQISGP
Trigger: AGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAA...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTTTGCTGAACCAACATaGCTTCAAATTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVFAEPT*LQISGP
Trigger: AGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAA...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGATCTCATCAGATAAAGTaGGTGTTTCTGAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGSHQIK*VFLRVV
Trigger: AACAACCCTCAGAAACACCCACTTTATCTGATGAGA...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCTCGGGTGGCAGCACTTaGAGTCACACATGCCACTTT +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFSGGST*SHTCHF
Trigger: AAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGA...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAAAAGAGTGGGAATCTTaGATGGCAATTAGCTCACTT +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGKEWES*MAISSL
Trigger: AAGTGAGCTAATTGCCATCCAAGATTCCCACTCTTT...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTAAAGAGTGGGAATCTTaGATGGCAATTAGCTCACTT +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSKEWES*MAISSL
Trigger: AAGTGAGCTAATTGCCATCCAAGATTCCCACTCTTT...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAGTGAGTTCTTTTTATTaGAAGAGGACTCCGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGVSSFY*KRTPSH
Trigger: ATGAGACGGAGTCCTCTTCCAATAAAAAGAACTCAC...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCGGGCTCTGCTCAGCTTaGGACAGAAGGACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFGLCSA*DRRTSS
Trigger: GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTCCCGGCAAGGAAGGCTaGCGGAGGGTTCATAGGTGT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLPGKEG*RRVHRC
Trigger: ACACCTATGAACCCTCCGGCAGCCTTCCTTGCCGGG...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCCTGTTGCTGGTGCACTaGAACCATGTCATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFLLLVH*NHVIEL
Trigger: GAGCTCAATGACATGGTTGCAGTGCACCAGCAACAG...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGCATCACGTAGGGCATaGTCTAGCATTTTAAATTTA +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPASRRA*SSILNL
Trigger: TAAATTTAAAATGCTAGAGCATGCCCTACGTGATGC...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTTCTGACCCGATGTTCTaGCGCCCGGCAAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLSDPMF*RPARKA
Trigger: AGCCTTCCTTGCCGGGCGCCAGAACATCGGGTCAGA...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCTTAATATCGACTTTTaGGTGGTTATTTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFLNIDF*VVIFKV
Trigger: GACCTTGAAAATAACCACCCAAAAGTCGATATTAAG...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGCTTAATATCGACTTTTaGGTGGTTATTTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQLNIDF*VVIFKV
Trigger: GACCTTGAAAATAACCACCCAAAAGTCGATATTAAG...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AGGGAGAAAGCACGCATTGATAAAGAACATAACCAAACCTCACCCAACTTCTCTATGAAGTTACTCGGGTaGCAGCACTTGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: REKARIDKEHNQTSPNFSMKLLG*QHLESH
Trigger: GTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCAT...AGAGAAGTTGGGTGAGGTTTGGTTATGTTCTTTATCAATGCGTGCTTTCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR TCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTGTTTGGCATTCCATTTaGTTGGATTCAAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFVWHSI*LDSRAF
Trigger: AAAAGCTCTTGAATCCAATCAAATGGAATGCCAAAC...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TGTCTGCTTTCTGCCTTCCACATAGATGAGAAATTCGTGATCACGATGAATACTCTGTTGCTGGTGCACTaGAACCATGTCATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: CLLSAFHIDEKFVITMNTLLLVH*NHVIEL
Trigger: GAGCTCAATGACATGGTTGCAGTGCACCAGCAACAG...AGTATTCATCGTGATCACGAATTTCTCATCTATGTGGAAGGCAGAAAGCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000537566.5
CDS-3UTR GCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTGCATCACGTAGGGCATaGTCTAGCATTTTAAATTTA +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFASRRA*SSILNL
Trigger: TAAATTTAAAATGCTAGAGCATGCCCTACGTGATGC...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR GCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTGAATTTGTGCGTTCTTaGTTTGACTTCGCAATATTA +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSEFVRS*FDFAIL
Trigger: TAATATTGCGAAGTCAAAGCAAGAACGCACAAATTC...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAGAATTTGTGCGTTCTTaGTTTGACTTCGCAATATTA +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGEFVRS*FDFAIL
Trigger: TAATATTGCGAAGTCAAAGCAAGAACGCACAAATTC...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAAAACAGCACTTTCTATaGAGGGTTCTTTCTCTATTT +
Preference number: 4 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPKQHFL*RVLSLF
Trigger: AAATAGAGAAAGAACCCTGCATAGAAAGTGCTGTTT...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAAAACAGCACTTTCTATaGAGGGTTCTTTCTCTATTT +
Preference number: 4 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGKQHFL*RVLSLF
Trigger: AAATAGAGAAAGAACCCTGCATAGAAAGTGCTGTTT...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCTGTAGCTGTCCTACCTaGGCAGAAAGTTCCACTAAC +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFCSCPT*AESSTN
Trigger: GTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACA...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
CDS-3UTR CCA 90 bp AAAGCACGCATTGATAAAGAACATAACCAAACCTCACCCAACTTCTCTTTTCAGAAGTCTCCGCCATCTTaGCATCACGTAGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: KARIDKEHNQTSPNFSFQKSPPS*HHVGHA
Trigger: AGCATGCCCTACGTGATGCCAAGATGGCGGAGACTT...CTGAAAAGAGAAGTTGGGTGAGGTTTGGTTATGTTCTTTATCAATGCGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR CCA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTCTTAATATCGACTTTTaGGTGGTTATTTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: KDGALLSLGQKDLELFSSLNIDF*VVIFKV
Trigger: GACCTTGAAAATAACCACCCAAAAGTCGATATTAAG...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTGGGAATCTTGGATaGCAATTAGCTCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFSGNLG*QLAHLP
Trigger: CGGCAAGTGAGCTAATTGCCATCCAAGATTCCCACT...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGCTGGAGCTTGCTCGTaGGCGAGAAATCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKAGACS*ARNHPG
Trigger: CCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGGAAATCTCAACTTCTaGCCCGATGTTCTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKGNLNF*PDVLAP
Trigger: GGGCGCCAGAACATCGGGTCAGAAGTTGAGATTTCC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
CDS-3UTR TCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCGCAAGAGCTCTTGTCTaGCCTATTTTGCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFARALV*PILLNQ
Trigger: TTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGC...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCGGCCCAGGTAAACACTaGCATCATGCCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFGPGKH*HHATAS
Trigger: AGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCC...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAGGTCCGTCACCATCTaGCGAGATTCCGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLRSVTI*RDSASK
Trigger: TTTGCTGGCGGAATCTCGTCAGATGGTGACGGACCT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGAGGTCCGTCACCATCTaGCGAGATTCCGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKRSVTI*RDSASK
Trigger: TTTGCTGGCGGAATCTCGTCAGATGGTGACGGACCT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTGAATTTGTGCGTTCTTaGTTTGACTTCGCAATATTA +
Preference number: 4 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFEFVRS*FDFAIL
Trigger: TAATATTGCGAAGTCAAAGCAAGAACGCACAAATTC...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCCGTTCTGAACCCCAGTaGCATGACATTTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFRSEPQ*HDILVI
Trigger: AATCACCAAAATGTCATGGCACTGGGGTTCAGAACG...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TGTCTGCTTTCTGCCTTCCACATAGATGAGAAATTCGTGATCACGATGAATACTGGGAGTCATGTTGTGTaGCACAGATGCTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: CLLSAFHIDEKFVITMNTGSHVV*HRCFLN
Trigger: GTTCAGAAAGCATCTGTGGCACACAACATGACTCCC...AGTATTCATCGTGATCACGAATTTCTCATCTATGTGGAAGGCAGAAAGCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000537566.5
CDS-3UTR GCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGACCGAGATCGTGCCATTaGACTCTAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRPRSCH*TLAWAT
Trigger: TGTTGCCCAGGCTAGAGTGCAATGGCACGATCTCGG...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS-3UTR CCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAACACATGTCTCTGCTaGAGTCCAGAGCCTTTGATT +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFNTCLC*SPEPLI
Trigger: AATCAAAGGCTCTGGACTCCAGCAGAGACATGTGTT...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCATAGACCCAGAAAGATaGGGCTCTGCTCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFIDPER*GSAQLG
Trigger: CCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTAT...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCCTGCAACCATGTCATTaGGCTCTTTATCTCGATCTT +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFLQPCH*ALYLDL
Trigger: AAGATCGAGATAAAGAGCTCAATGACATGGTTGCAG...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCATTTTTCTGGCAGCATaGGATTTCGGACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFIFLAA*DFGPFH
Trigger: ATGGAAAGGTCCGAAATCTCATGCTGCCAGAAAAAT...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTCTGGGGCTTCAATTATaGAGTTACTCGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLLGLQL*SYSGGS
Trigger: GCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAG...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR TCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAGGTGCACCCAGATTTaGGGCGGACAATTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLRCTQI*GGQFSA
Trigger: TGCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGAGGTGCACCCAGATTTaGGGCGGACAATTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKRCTQI*GGQFSA
Trigger: TGCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCCACCTTCTAATTTGCTaGAACGTTCTTCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFHLLIC*NVLPVS
Trigger: TGACACTGGAAGAACGTTGCAGCAAATTAGAAGGTG...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCCTGACATCATGCCACTaGTTCTCATCAGATAAAGTG +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFLTSCH*FSSDKV
Trigger: CACTTTATCTGATGAGAAGCAGTGGCATGATGTCAG...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTACTTGGAGTCACACATaGCACTTTCGCCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLTWSHT*HFRPDR
Trigger: CCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR GCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGACTTGGAGTCACACATaGCACTTTCGCCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKTWSHT*HFRPDR
Trigger: CCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGGCGGACAATTCTCTaGATTTTGGAAGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFRRTIL*ILEGLK
Trigger: TTTCAAGCCTTCCAAAATGCAGAGAATTGTCCGCCT...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGCAAACGCTGGAGCTTaGTCGTGGGCGAGAAATCAT +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKANAGA*SWARNH
Trigger: ATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAGAAAGATGGGGCTCTaGTCAGCTTGGGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLRKMGL*SAWDRR
Trigger: CCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR GCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGAGAAAGATGGGGCTCTaGTCAGCTTGGGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKRKMGL*SAWDRR
Trigger: CCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAAGTCTCCGCCATCTTaGCATCACGTAGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLKSPPS*HHVGHA
Trigger: AGCATGCCCTACGTGATGCCAAGATGGCGGAGACTT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTCGGGTGGCAGCACTTaGAGTCACACATGCCACTTT +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKSGGST*SHTCHF
Trigger: AAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCGAAGAACCCAAAGAGTaGGAATCTTGGATGGCAATT +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFEEPKE*ESWMAI
Trigger: AATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTC...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGCCACAGATGCTTTCTaGACAGGTGCACCCAGATTT +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKATDAF*TGAPRF
Trigger: AAATCTGGGTGCACCTGTTCAGAAAGCATCTGTGGC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCGGAAATCTCAACTTCTaGCCCGATGTTCTAAACATA +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFGNLNF*PDVLNI
Trigger: TATGTTTAGAACATCGGGTCAGAAGTTGAGATTTCC...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCTTTACCCGAACAATCTaGAATGTGATTAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFFTRTI*NVINCL
Trigger: GAGGCAGTTAATCACATTGCAGATTGTTCGGGTAAA...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAAAAGCAATTCATCGTaGAGGCAACTTTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFKSNSS*RQLFSC
Trigger: GCAAGAGAAAAGTTGCCTGCACGATGAATTGCTTTT...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCATCTGTCTCAGATTGTaGAGTTCTGAATTTGTGCGT +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFICLRL*SSEFVR
Trigger: ACGCACAAATTCAGAACTGCACAATCTGAGACAGAT...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TGTCTGCTTTCTGCCTTCCACATAGATGAGAAATTCGTGATCACGATGAATACTAGGCGGACAATTCTCTaGATTTTGGAAGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: CLLSAFHIDEKFVITMNTRRTIL*ILEGLK
Trigger: TTTCAAGCCTTCCAAAATGCAGAGAATTGTCCGCCT...AGTATTCATCGTGATCACGAATTTCTCATCTATGTGGAAGGCAGAAAGCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000537566.5
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTGTTGTGTGCCACAGATaGTTTCTGAACAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLVVCHR*FLNRCT
Trigger: GGTGCACCTGTTCAGAAAGCATCTGTGGCACACAAC...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR GCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAGTTGTGTGCCACAGATaGTTTCTGAACAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRVVCHR*FLNRCT
Trigger: GGTGCACCTGTTCAGAAAGCATCTGTGGCACACAAC...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCGAAAGAAGCTGTTGCTaGTGCACTGCAACCATGTCA +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFERSCC*CTATMS
Trigger: TGACATGGTTGCAGTGCACCAGCAACAGCTTCTTTC...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGATGAAGTTACTCGGGTaGCAGCACTTGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKMKLLG*QHLESH
Trigger: GTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCAT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTTCCACGTCAGACATGTaGCCTGGGGCTTCAATTATG +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLSTSDM*PGASIM
Trigger: CATAATTGAAGCCCCAGGCCACATGTCTGACGTGGA...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGATCCACGTCAGACATGTaGCCTGGGGCTTCAATTATG +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRSTSDM*PGASIM
Trigger: CATAATTGAAGCCCCAGGCCACATGTCTGACGTGGA...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCAGTGGGAATCTTGGATaGCAATTAGCTCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFSGNLG*QLAHLP
Trigger: CGGCAAGTGAGCTAATTGCCATCCAAGATTCCCACT...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTTCTCCAATGAGCAACTaGAGCTCCTTCCGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLSPMSN*SSFRCF
Trigger: GAAACAACGGAAGGAGCTGCAGTTGCTCATTGGAGA...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR GCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGAGAAGCTGTTGCTGGTaGACTGCAACCATGTCATTG +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKRSCCW*TATMSL
Trigger: CAATGACATGGTTGCAGTGCACCAGCAACAGCTTCT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAAGAAGCTGTTGCTGGTaGACTGCAACCATGTCATTG +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRRSCCW*TATMSL
Trigger: CAATGACATGGTTGCAGTGCACCAGCAACAGCTTCT...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGACATGAAAGAAGCTGTTaGTGGTGCACTGCAACCATG +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRHERSC*WCTATM
Trigger: CATGGTTGCAGTGCACCAGCAACAGCTTCTTTCATG...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTCATGAAAGAAGCTGTTaGTGGTGCACTGCAACCATG +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLHERSC*WCTATM
Trigger: CATGGTTGCAGTGCACCAGCAACAGCTTCTTTCATG...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCGCATCACGTAGGGCATaGTCTAGCATTTTAAATTTA +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFASRRA*SSILNL
Trigger: TAAATTTAAAATGCTAGAGCATGCCCTACGTGATGC...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
CDS-3UTR GCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCCGTTCTGAACCCCAGTaGCATGACATTTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFRSEPQ*HDILVI
Trigger: AATCACCAAAATGTCATGGCACTGGGGTTCAGAACG...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGGGAGTCATGTTGTGTaGCACAGATGCTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKGSHVV*HRCFLN
Trigger: GTTCAGAAAGCATCTGTGGCACACAACATGACTCCC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAGGGAGTCATGTTGTGTaGCACAGATGCTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRGSHVV*HRCFLN
Trigger: GTTCAGAAAGCATCTGTGGCACACAACATGACTCCC...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCCATTATCCCCTACCTTaGCCCAGCAATTTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFHYPLP*PSNLSN
Trigger: GTTACTCAAATTGCTGGGGCAAGGTAGGGGATAATG...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTGAAAGAAGCTGTTGCTaGTGCACTGCAACCATGTCA +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLERSCC*CTATMS
Trigger: TGACATGGTTGCAGTGCACCAGCAACAGCTTCTTTC...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTTGTAGCTGTCCTACCTaGGCAGAAAGTTCCACTAAC +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLCSCPT*AESSTN
Trigger: GTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACA...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCTTTTCGGGTTCAATCTaGGTTTTTCCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFFSGSI*VFPPRD
Trigger: GTCTCTGGGAGGAAAAACCCAGATTGAACCCGAAAA...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAAGTGGGAATCTTGGATaGCAATTAGCTCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRSGNLG*QLAHLP
Trigger: CGGCAAGTGAGCTAATTGCCATCCAAGATTCCCACT...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
3UTR CAA 72 bp AAAAATGCGTCTAAAACTCGATCTTCCAGCAAGCTTTaGTTTGTGTCAGTAGGTGGGACTAATATAGACCCA +
Preference number: 4 (lower is better)
Translates to: KNASKTRSSSKL*FVSVGGTNIDP
Trigger: TGGGTCTATATTAGTCCCACCTACTGACACAAACAAAAGCTTGCTGGAAGATCGAGTTTTAGACGCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AAAGCACGCATTGATAAAGAACATAACCAAACCTCACCCAACTTCTCTTTTCAGTCTGACCTATTTTGCTaGACCAACATGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: KARIDKEHNQTSPNFSFQSDLFC*TNMASN
Trigger: ATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGA...CTGAAAAGAGAAGTTGGGTGAGGTTTGGTTATGTTCTTTATCAATGCGTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGCAAGAGCTCTTGTCTaGCCTATTTTGCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKARALV*PILLNQ
Trigger: TTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCGAATTTGTGCGTTCTTaGTTTGACTTCGCAATATTA +
Preference number: 4 (lower is better)
Translates to: FCSQLELSAVYEELESSFEFVRS*FDFAIL
Trigger: TAATATTGCGAAGTCAAAGCAAGAACGCACAAATTC...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTATAAACACATGTCTCTaGTGGAGTCCAGAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLINTCL*WSPEPL
Trigger: CAAAGGCTCTGGACTCCAGCAGAGACATGTGTTTAT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTCGTTCTGAACCCCAGTaGCATGACATTTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLRSEPQ*HDILVI
Trigger: AATCACCAAAATGTCATGGCACTGGGGTTCAGAACG...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAACACATGTCTCTGCTaGAGTCCAGAGCCTTTGATT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLNTCLC*SPEPLI
Trigger: AATCAAAGGCTCTGGACTCCAGCAGAGACATGTGTT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTTTTCGGGTTCAATCTaGGTTTTTCCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKFSGSI*VFPPRD
Trigger: GTCTCTGGGAGGAAAAACCCAGATTGAACCCGAAAA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTCAGGCTTCATTTTTCTaGCAGCATGAGATTTCGGAC +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLQASFF*QHEISD
Trigger: GTCCGAAATCTCATGCTGCCAGAAAAATGAAGCCTG...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTGTCAGACATGTGGCCTaGGGCTTCAATTATGAAGTT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLVRHVA*GFNYEV
Trigger: AACTTCATAATTGAAGCCCCAGGCCACATGTCTGAC...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAGTCAGACATGTGGCCTaGGGCTTCAATTATGAAGTT +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRVRHVA*GFNYEV
Trigger: AACTTCATAATTGAAGCCCCAGGCCACATGTCTGAC...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp AAAGCACGCATTGATAAAGAACATAACCAAACCTCACCCAACTTCTCTTTTCAGGTTTGGCATTCCATTTaGTTGGATTCAAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KARIDKEHNQTSPNFSFQVWHSI*LDSRAF
Trigger: AAAAGCTCTTGAATCCAATCAAATGGAATGCCAAAC...CTGAAAAGAGAAGTTGGGTGAGGTTTGGTTATGTTCTTTATCAATGCGTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGATTTTTCTGGCAGCATaGGATTTCGGACCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKIFLAA*DFGPFH
Trigger: ATGGAAAGGTCCGAAATCTCATGCTGCCAGAAAAAT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGTTCACCTTCTAATTTaGTGCAACGTTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKVHLLI*CNVLPV
Trigger: CACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAAC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAAAGAGAAGAATGCGTTaGCTTTTGAGCCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRKRRMR*LLSHFL
Trigger: CAGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTT...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAAGAGAAGAATGCGTTaGCTTTTGAGCCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLKRRMR*LLSHFL
Trigger: CAGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAGGCAACTTTTCTCTTaGTTGAGGCGAATGATCTCT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLRQLFS*LRRMIS
Trigger: AGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR GCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGCTGACATCATGCCACTaGTTCTCATCAGATAAAGTG +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKLTSCH*FSSDKV
Trigger: CACTTTATCTGATGAGAAGCAGTGGCATGATGTCAG...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR GCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAATGCCATACGTACCATaGCTAAAAAGTGGGACTGTT +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRMPYVP*LKSGTV
Trigger: AACAGTCCCACTTTTTAGGCATGGTACGTATGGCAT...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS-3UTR CCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAGAAGAACCCAAAGAGTaGGAATCTTGGATGGCAATT +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMREEPKE*ESWMAI
Trigger: AATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTC...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCGTGAGTTCTTTTTATTaGAAGAGGACTCCGTCTCAT +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFVSSFY*KRTPSH
Trigger: ATGAGACGGAGTCCTCTTCCAATAAAAAGAACTCAC...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGACTGTCGTCTTTTCATTaGGGTCCTCTTTTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRLSSFH*GPLLVC
Trigger: ACAAACTAAAAGAGGACCTCAATGAAAAGACGACAG...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR TCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTCTGTCGTCTTTTCATTaGGGTCCTCTTTTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLLSSFH*GPLLVC
Trigger: ACAAACTAAAAGAGGACCTCAATGAAAAGACGACAG...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTGTGCGTTCTTGCTTTaGCTTCGCAATATTAAGCAA +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKCAFLL*LRNIKQ
Trigger: TTGCTTAATATTGCGAAGTCAAAGCAAGAACGCACA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGATGTGCGTTCTTGCTTTaGCTTCGCAATATTAAGCAA +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRCAFLL*LRNIKQ
Trigger: TTGCTTAATATTGCGAAGTCAAAGCAAGAACGCACA...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTTCTGACCTATTTTGCTaGACCAACATGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLSDLFC*TNMASN
Trigger: ATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGA...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTCTGACCTATTTTGCTaGACCAACATGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKSDLFC*TNMASN
Trigger: ATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGATCTGACCTATTTTGCTaGACCAACATGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRSDLFC*TNMASN
Trigger: ATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGA...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTTTGAAGCCTTTTCATTaGATGCTGGTGCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLLKPFH*MLVHLC
Trigger: ACAAAGATGCACCAGCATTCAATGAAAAGGCTTCAA...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTTGAAGCCTTTTCATTaGATGCTGGTGCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKLKPFH*MLVHLC
Trigger: ACAAAGATGCACCAGCATTCAATGAAAAGGCTTCAA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGATCACGATGAATACTaGAGTTGCCTTTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKDHDEY*SCLLFP
Trigger: AGGAAACAAAAGGCAACTTCAGTATTCATCGTGATC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000537566.5
CDS-3UTR TCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAGATCACGATGAATACTaGAGTTGCCTTTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRDHDEY*SCLLFP
Trigger: AGGAAACAAAAGGCAACTTCAGTATTCATCGTGATC...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000537566.5
CDS-3UTR TCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGCATGAAAATCATCTCTaGAGTAACACTGAGACCTGT +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKHENHL*SNTETC
Trigger: ACAGGTCTCAGTGTTACTTCAGAGATGATTTTCATG...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR GCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGAAAAGCAATTCATCGTaGAGGCAACTTTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKKSNSS*RQLFSC
Trigger: GCAAGAGAAAAGTTGCCTGCACGATGAATTGCTTTT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTATCTGTCTCAGATTGTaGAGTTCTGAATTTGTGCGT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLICLRL*SSEFVR
Trigger: ACGCACAAATTCAGAACTGCACAATCTGAGACAGAT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR GCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTGTTGTTTCTTCTCTTTaGATTCATCGCAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLVVSSL*IHRKSS
Trigger: AGAGCTCTTGCGATGAATGCAAAGAGAAGAAACAAC...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTTTTGCTGAACCAACATaGCTTCAAATTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLFAEPT*LQISGP
Trigger: AGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAA...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTTCTCATCAGATAAAGTaGGTGTTTCTGAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLSHQIK*VFLRVV
Trigger: AACAACCCTCAGAAACACCCACTTTATCTGATGAGA...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTCTCATCAGATAAAGTaGGTGTTTCTGAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKSHQIK*VFLRVV
Trigger: AACAACCCTCAGAAACACCCACTTTATCTGATGAGA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAAAGAGTGGGAATCTTaGATGGCAATTAGCTCACTT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLKEWES*MAISSL
Trigger: AAGTGAGCTAATTGCCATCCAAGATTCCCACTCTTT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAAAAGAGTGGGAATCTTaGATGGCAATTAGCTCACTT +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRKEWES*MAISSL
Trigger: AAGTGAGCTAATTGCCATCCAAGATTCCCACTCTTT...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGTGAGTTCTTTTTATTaGAAGAGGACTCCGTCTCAT +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKVSSFY*KRTPSH
Trigger: ATGAGACGGAGTCCTCTTCCAATAAAAAGAACTCAC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR TCA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTGTTTGGCATTCCATTTaGTTGGATTCAAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLVWHSI*LDSRAF
Trigger: AAAAGCTCTTGAATCCAATCAAATGGAATGCCAAAC...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR GCA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAGCATCACGTAGGGCATaGTCTAGCATTTTAAATTTA +
Preference number: 4 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRASRRA*SSILNL
Trigger: TAAATTTAAAATGCTAGAGCATGCCCTACGTGATGC...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR GCA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCTTCCAGTGTTCAATATaGATGACAACTACAACATCT +
Preference number: 4 (lower is better)
Translates to: RASLAFNCSPYLYREVFFFQCSI*MTTTTS
Trigger: AGATGTTGTAGTTGTCATGCATATTGAACACTGGAA...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS-3UTR CCA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGCTTAATATCGACTTTTaGGTGGTTATTTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: ELSAVYEELESSFSFTVKLNIDF*VVIFKV
Trigger: GACCTTGAAAATAACCACCCAAAAGTCGATATTAAG...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CCA 90 bp CGGAGGGTTCATAGGTGTTTCCTCCGCCCCCGGAGAAGCCCGGTGTaGGCGGCGTCACCTCAGAAACGCCATCGGCGCGCCTGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: RRVHRCFLRPRRSPV*AASPQKRHRRACPE
Trigger: CTCGGGGCAGGCGCGCCGATGGCGTTTCTGAGGTGACGCCGCCCACACCGGGCTTCTCCGGGGGCGGAGGAAACACCTATGAACCCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000539171.1
CDS TCA 90 bp TGGCTGATGGGCAGCAGTGTGCTCAGCTCCAGGTCCGTCACCATCTaGCGAGATTCCGCCAGCAAACGCTGGAGCTTGCTCGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: WLMGSSVLSSRSVTI*RDSASKRWSLLVGE
Trigger: CTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGAATCTCGTCAGATGGTGACGGACCTGGAGCTGAGCACACTGCTGCCCATCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS GCA 90 bp GGTCCGTCACCATCTGACGAGATTCCGCCAGCAAACGCTGGAGCTTaGTCGTGGGCGAGAAATCATCCTGGGAGGGTAACACAATTGAAG +
Preference number: 5 (lower is better)
Translates to: GPSPSDEIPPANAGA*SWARNHPGRVTQLK
Trigger: CTTCAATTGTGTTACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGAATCTCGTCAGATGGTGACGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CCA 90 bp TCTGGGACCTCTGACTTATTTGTGGCACTGCCAGTGAGATTCTCATaGCTGATGGGCAGCAGTGTGCTCAGCTCCAGGTCCGTCACCATC +
Preference number: 5 (lower is better)
Translates to: SGTSDLFVALPVRFS*LMGSSVLSSRSVTI
Trigger: GATGGTGACGGACCTGGAGCTGAGCACACTGCTGCCCATCAGCCATGAGAATCTCACTGGCAGTGCCACAAATAAGTCAGAGGTCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000537566.5
CDS-3UTR CAA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCCAGGTGCACCCAGATTaGAGGCGGACAATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSQVHPD*RRTILC
Trigger: GCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTG...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTGCCGAGATCGTGCCATaGCACTCTAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVAEIVP*HSSLGN
Trigger: GTTGCCCAGGCTAGAGTGCAATGGCACGATCTCGGC...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS CCA 90 bp ACGTCAGACATGTGGCCTGGGGCTTCAATTATGAAGTTACTCGGGTaGCAGCACTTGGAGTCACACATGCCACTTTCGCCCAGACAGGCT +
Preference number: 5 (lower is better)
Translates to: TSDMWPGASIMKLLG*QHLESHMPLSPRQA
Trigger: AGCCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAGGCCACATGTCTGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACAAGTCTCCGCCATCTaGGCATCACGTAGGGCATGC +
Preference number: 5 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGQVSAI*ASRRAC
Trigger: GCATGCCCTACGTGATGCCAAGATGGCGGAGACTTG...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCAGGTGCACCCAGATTaGAGGCGGACAATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFQVHPD*RRTILC
Trigger: GCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTG...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCTGCCGGGGAGTCATGTaGTGTGCCACAGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: QKDGALLSLGQKDLELFSCRGVM*CATDAF
Trigger: GAAAGCATCTGTGGCACACAACATGACTCCCCGGCA...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGAGCAAACGCTGGAGCTaGCTCGTGGGCGAGAAATCA +
Preference number: 5 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQSKRWS*LVGEKS
Trigger: TGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCT...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCAGCAAACGCTGGAGCTaGCTCGTGGGCGAGAAATCA +
Preference number: 5 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFSKRWS*LVGEKS
Trigger: TGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCT...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTCAAGTCTCCGCCATCTaGGCATCACGTAGGGCATGC +
Preference number: 5 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFQVSAI*ASRRAC
Trigger: GCATGCCCTACGTGATGCCAAGATGGCGGAGACTTG...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGATGCCGGGGAGTCATGTaGTGTGCCACAGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGCRGVM*CATDAF
Trigger: GAAAGCATCTGTGGCACACAACATGACTCCCCGGCA...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTTGGCAATTAGCTCACTaGCCGGGGAGTCATGTTGTG +
Preference number: 5 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFWQLAH*PGSHVV
Trigger: CACAACATGACTCCCCGGCAAGTGAGCTAATTGCCA...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CCA 90 bp TCCGCCAGCAAACGCTGGAGCTTGCTCGTGGGCGAGAAATCATCCTaGGAGGGTAACACAATTGAAGCCTTTTCATTGAATGCTGGTGCA +
Preference number: 5 (lower is better)
Translates to: SASKRWSLLVGEKSS*EGNTIEAFSLNAGA
Trigger: TGCACCAGCATTCAATGAAAAGGCTTCAATTGTGTTACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CCA 90 bp TCACCATCTGACGAGATTCCGCCAGCAAACGCTGGAGCTTGCTCGTaGGCGAGAAATCATCCTGGGAGGGTAACACAATTGAAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: SPSDEIPPANAGACS*ARNHPGRVTQLKPF
Trigger: AAAAGGCTTCAATTGTGTTACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGAATCTCGTCAGATGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTGGAGTCCAGAGCCTTaGATTCCTCCATCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSWSPEP*IPPSLS
Trigger: ACTCAAAGATGGAGGAATCAAAGGCTCTGGACTCCA...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCCTGGATGTTTTGAACTaGGACAGTTGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: QKDGALLSLGQKDLELFSLDVLN*DSWSGP
Trigger: TGGGCCTGACCAACTGTCCAAGTTCAAAACATCCAG...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTGGCAATTAGCTCACTaGCCGGGGAGTCATGTTGTG +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVWQLAH*PGSHVV
Trigger: CACAACATGACTCCCCGGCAAGTGAGCTAATTGCCA...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTAGCAAACGCTGGAGCTaGCTCGTGGGCGAGAAATCA +
Preference number: 5 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFSKRWS*LVGEKS
Trigger: TGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCT...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS TCA 90 bp TACTCATCCACTCCACGTCAGACATGTGGCCTGGGGCTTCAATTATaGAGTTACTCGGGTGGCAGCACTTGGAGTCACACATGCCACTTT +
Preference number: 5 (lower is better)
Translates to: YSSTPRQTCGLGLQL*SYSGGSTWSHTCHF
Trigger: AAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAGGCCACATGTCTGACGTGGAGTGGATGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CCA 90 bp GGAAGGCTTGAAAATACTCATCCACTCCACGTCAGACATGTGGCCTaGGGCTTCAATTATGAAGTTACTCGGGTGGCAGCACTTGGAGTC +
Preference number: 5 (lower is better)
Translates to: GRLENTHPLHVRHVA*GFNYEVTRVAALGV
Trigger: GACTCCAAGTGCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAGGCCACATGTCTGACGTGGAGTGGATGAGTATTTTCAAGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGCTGCAGCTCCTTCCGTaGTTTCTCGATAGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQLQLLP*FLDSGN
Trigger: ATTTCCACTATCGAGAAACAACGGAAGGAGCTGCAG...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCAGAATGCGTTGCCTTTaGAGCCATTTCCTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFRMRCL*SHFLKL
Trigger: CAGCTTCAGGAAATGGCTCAAAAGGCAACGCATTCT...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR CAA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCGAAGAGAAGAATGCGTaGCCTTTTGAGCCATTTCCT +
Preference number: 5 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSEEKNA*PFEPFP
Trigger: AGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTTC...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR CAA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACTGGATGTTTTGAACTaGGACAGTTGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGLDVLN*DSWSGP
Trigger: TGGGCCTGACCAACTGTCCAAGTTCAAAACATCCAG...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCGGGGCTCTGCTCAGCTaGGGACAGAAGGACCTCGAG +
Preference number: 5 (lower is better)
Translates to: FCSQLELSAVYEELESSFGALLS*GQKDLE
Trigger: CTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCC...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCTCTTCCAGCAAGCTTTaGTTTGTGTCAGTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: QKDGALLSLGQKDLELFSSSSKL*FVSVGG
Trigger: CCCACCTACTGACACAAACAAAAGCTTGCTGGAAGA...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCTGCAGCTCCTTCCGTaGTTTCTCGATAGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVLQLLP*FLDSGN
Trigger: ATTTCCACTATCGAGAAACAACGGAAGGAGCTGCAG...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCGAAGAGAAGAATGCGTaGCCTTTTGAGCCATTTCCT +
Preference number: 5 (lower is better)
Translates to: QKDGALLSLGQKDLELFSEEKNA*PFEPFP
Trigger: AGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTTC...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR CAA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTCAGGCAACTTTTCTCTaGCTTGAGGCGAATGATCTC +
Preference number: 5 (lower is better)
Translates to: KDGALLSLGQKDLELFSSQATFL*LEANDL
Trigger: GAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCTG...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTGTGCAGTTCTGAATTaGTGCGTTCTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSCAVLN*CVLALT
Trigger: AGTCAAAGCAAGAACGCACAAATTCAGAACTGCACA...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTGGAGTCCAGAGCCTTaGATTCCTCCATCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVWSPEP*IPPSLS
Trigger: ACTCAAAGATGGAGGAATCAAAGGCTCTGGACTCCA...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCATGGAGTCCAGAGCCTTaGATTCCTCCATCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPWSPEP*IPPSLS
Trigger: ACTCAAAGATGGAGGAATCAAAGGCTCTGGACTCCA...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTAGAGACCAAGGGAGGTaGTGTTTCTCTACTAAGTCT +
Preference number: 5 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFRDQGR*CFSTKS
Trigger: AGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCT...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCAGAGACCAAGGGAGGTaGTGTTTCTCTACTAAGTCT +
Preference number: 5 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFRDQGR*CFSTKS
Trigger: AGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCT...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCACCTTCTAATTaGCTGCAACGTTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: QKDGALLSLGQKDLELFSSSPSN*LQRSSS
Trigger: ACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAACT...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCTTTTGGAGAGCTGTTaGGCATTCCATTTGATTGGA +
Preference number: 5 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFLLESC*AFHLIG
Trigger: TCCAATCAAATGGAATGCCAAACAGCTCTCCAAAAG...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCCAAGTCTCCGCCATCTaGGCATCACGTAGGGCATGC +
Preference number: 5 (lower is better)
Translates to: FCSQLELSAVYEELESSFQVSAI*ASRRAC
Trigger: GCATGCCCTACGTGATGCCAAGATGGCGGAGACTTG...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTCAGGCAACTTTTCTCTaGCTTGAGGCGAATGATCTC +
Preference number: 5 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFQATFL*LEANDL
Trigger: GAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCTG...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp CCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCTGTGCAGTTCTGAATTaGTGCGTTCTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: PERWGSAQLGTEGPRAIFCAVLN*CVLALT
Trigger: AGTCAAAGCAAGAACGCACAAATTCAGAACTGCACA...GAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTGTGCAGTTCTGAATTaGTGCGTTCTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQCAVLN*CVLALT
Trigger: AGTCAAAGCAAGAACGCACAAATTCAGAACTGCACA...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCCACAGTATCGATCTGTaGTTTCTTCTCTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSHSIDL*FLLFAF
Trigger: GAATGCAAAGAGAAGAAACAACAGATCGATACTGTG...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTTCTCTACTAAGTCTTaGGTGAATATGGATGACAGC +
Preference number: 5 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSFSTKS*VNMDDS
Trigger: GCTGTCATCCATATTCACCAAAGACTTAGTAGAGAA...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTAGAGACCAAGGGAGGTaGTGTTTCTCTACTAAGTCT +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVRDQGR*CFSTKS
Trigger: AGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCT...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCGGGAGAAAGCACGCATaGATAAAGAACATAACCAAA +
Preference number: 5 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSGRKHA*IKNITK
Trigger: TTTGGTTATGTTCTTTATCAATGCGTGCTTTCTCCC...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS GCA 90 bp TCACCTTCTAATTTGCTGCAACGTTCTTCCAGTGTCAACACTTTCTaGCGATCCTCTTCCCATGAAAGAAGCTGTTGCTGGTGCACTGCA +
Preference number: 5 (lower is better)
Translates to: SPSNLLQRSSSVNTF*RSSSHERSCCWCTA
Trigger: TGCAGTGCACCAGCAACAGCTTCTTTCATGGGAAGAGGATCGGCAGAAAGTGTTGACACTGGAAGAACGTTGCAGCAAATTAGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS CCA 90 bp TCCGTCTCATCTTCTCTCAAGGCAGATTTTGAAGAACCCAAAGAGTaGGAATCTTGGATGGCAATTAGCTCACTTGCCGGGGAGTCATGT +
Preference number: 5 (lower is better)
Translates to: SVSSSLKADFEEPKE*ESWMAISSLAGESC
Trigger: ACATGACTCCCCGGCAAGTGAGCTAATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTCAAAATCTGCCTTGAGAGAAGATGAGACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAACTGCAACCATGTCATaGAGCTCTTTATCTCGATCT +
Preference number: 5 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPTATMS*SSLSRS
Trigger: AGATCGAGATAAAGAGCTCAATGACATGGTTGCAGT...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAAGTTCACCTTCTAATTaGCTGCAACGTTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPSSPSN*LQRSSS
Trigger: ACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAACT...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCTTTTGGAGAGCTGTTaGGCATTCCATTTGATTGGA +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVLLESC*AFHLIG
Trigger: TCCAATCAAATGGAATGCCAAACAGCTCTCCAAAAG...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAAGTTCCACTAACGTGTaGCTGAGAGTTTCGTTTCTA +
Preference number: 5 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGSSTNV*LRVSFL
Trigger: TAGAAACGAAACTCTCAGCAACACGTTAGTGGAACT...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR CAA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTCTGTCGTCTTTTCATaGAGGTCCTCTTTTAGTTTG +
Preference number: 5 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQSVVFS*RSSFSL
Trigger: CAAACTAAAAGAGGACCTCAATGAAAAGACGACAGA...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp CAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCCACAGTATCGATCTGTaGTTTCTTCTCTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: QKDGALLSLGQKDLELFSHSIDL*FLLFAF
Trigger: GAATGCAAAGAGAAGAAACAACAGATCGATACTGTG...GGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTTGCACAATGTAATTTaGTTTTCGGGTTCAATCTGG +
Preference number: 5 (lower is better)
Translates to: YRPRKMGLCSAWDRRTSSLHNVI*FSGSIW
Trigger: CCAGATTGAACCCGAAAACAAAATTACATTGTGCAA...GCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGGACATTTTGGTGATTTaGTGTGGATCTTGCACAATG +
Preference number: 5 (lower is better)
Translates to: ERWGSAQLGTEGPRAIFQDILVI*CGSCTM
Trigger: CATTGTGCAAGATCCACACAAAATCACCAAAATGTC...CTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTGCTTTTCTGGATGTTTaGAACTTGGACAGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: KDGALLSLGQKDLELFSSAFLDV*NLDSWS
Trigger: TGACCAACTGTCCAAGTTCAAAACATCCAGAAAAGC...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGCTTTTCTGGATGTTTaGAACTTGGACAGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPAFLDV*NLDSWS
Trigger: TGACCAACTGTCCAAGTTCAAAACATCCAGAAAAGC...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGAGCTTTTCTGGATGTTTaGAACTTGGACAGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGAFLDV*NLDSWS
Trigger: TGACCAACTGTCCAAGTTCAAAACATCCAGAAAAGC...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTCCTTTCCATCTGATCTaGACATTCTACATCCAGCTT +
Preference number: 5 (lower is better)
Translates to: KDGALLSLGQKDLELFSSPFHLI*TFYIQL
Trigger: AAGCTGGATGTAGAATGTCAAGATCAGATGGAAAGG...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTCCTTTCCATCTGATCTaGACATTCTACATCCAGCTT +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVPFHLI*TFYIQL
Trigger: AAGCTGGATGTAGAATGTCAAGATCAGATGGAAAGG...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCACCTTTCCATCTGATCTaGACATTCTACATCCAGCTT +
Preference number: 5 (lower is better)
Translates to: RKMGLCSAWDRRTSSYFPPFHLI*TFYIQL
Trigger: AAGCTGGATGTAGAATGTCAAGATCAGATGGAAAGG...TGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGGGAGAAAGCACGCATTGATAAAGAACATAACCAAACCTCACCCAACTTCTCTCAGGTGCACCCAGATTaGAGGCGGACAATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: REKARIDKEHNQTSPNFSQVHPD*RRTILC
Trigger: GCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTG...AGAGAAGTTGGGTGAGGTTTGGTTATGTTCTTTATCAATGCGTGCTTTCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR CAA 90 bp AGGGAGAAAGCACGCATTGATAAAGAACATAACCAAACCTCACCCAACTTCTCTTGCCGGGGAGTCATGTaGTGTGCCACAGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: REKARIDKEHNQTSPNFSCRGVM*CATDAF
Trigger: GAAAGCATCTGTGGCACACAACATGACTCCCCGGCA...AGAGAAGTTGGGTGAGGTTTGGTTATGTTCTTTATCAATGCGTGCTTTCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR CAA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCGGGGCTCTGCTCAGCTaGGGACAGAAGGACCTCGAG +
Preference number: 5 (lower is better)
Translates to: RASLAFNCSPYLYREVFFGALLS*GQKDLE
Trigger: CTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCC...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS TCA 90 bp CTGGATGTTTTGAACTTGGACAGTTGGTCAGGCCCAGGTAAACACTaGCATCATGCCACTGCTTCTCATCAGATAAAGTGGGTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LDVLNLDSWSGPGKH*HHATASHQIKWVFL
Trigger: CAGAAACACCCACTTTATCTGATGAGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCCTGACCAACTGTCCAAGTTCAAAACATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS TCA 90 bp ACACATGCCACTTTCGCCCAGACAGGCTTCATTTTTCTGGCAGCATaGGATTTCGGACCTTTCCATCTGATCTTGACATTCTACATCCAG +
Preference number: 5 (lower is better)
Translates to: THATFAQTGFIFLAA*DFGPFHLILTFYIQ
Trigger: CTGGATGTAGAATGTCAAGATCAGATGGAAAGGTCCGAAATCTCATGCTGCCAGAAAAATGAAGCCTGTCTGGGCGAAAGTGGCATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS GCA 90 bp AGTGTCAACACTTTCTGCCGATCCTCTTCCCATGAAAGAAGCTGTTaGTGGTGCACTGCAACCATGTCATTGAGCTCTTTATCTCGATCT +
Preference number: 5 (lower is better)
Translates to: SVNTFCRSSSHERSC*WCTATMSLSSLSRS
Trigger: AGATCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCTTCTTTCATGGGAAGAGGATCGGCAGAAAGTGTTGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS GCA 90 bp ATGCTTTCTGAACAGGTGCACCCAGATTTGAGGCGGACAATTCTCTaGATTTTGGAAGGCTTGAAAATACTCATCCACTCCACGTCAGAC +
Preference number: 5 (lower is better)
Translates to: MLSEQVHPDLRRTIL*ILEGLKILIHSTSD
Trigger: GTCTGACGTGGAGTGGATGAGTATTTTCAAGCCTTCCAAAATGCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTGTTCAGAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGATCTGTCGTCTTTTCATaGAGGTCCTCTTTTAGTTTG +
Preference number: 5 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGSVVFS*RSSFSL
Trigger: CAAACTAAAAGAGGACCTCAATGAAAAGACGACAGA...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp CCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTTTGCACAATGTAATTTaGTTTTCGGGTTCAATCTGG +
Preference number: 5 (lower is better)
Translates to: PRKMGLCSAWDRRTSSYFLHNVI*FSGSIW
Trigger: CCAGATTGAACCCGAAAACAAAATTACATTGTGCAA...AAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTGACATTTTGGTGATTTaGTGTGGATCTTGCACAATG +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVDILVI*CGSCTM
Trigger: CATTGTGCAAGATCCACACAAAATCACCAAAATGTC...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTATTGAAGCCTTTTCATaGAATGCTGGTGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: KDGALLSLGQKDLELFSSIEAFS*NAGASL
Trigger: CAAAGATGCACCAGCATTCAATGAAAAGGCTTCAAT...ACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAGGGGCTCTGCTCAGCTaGGGACAGAAGGACCTCGAG +
Preference number: 5 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRGALLS*GQKDLE
Trigger: CTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCC...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTTTTCTCTCTCTACTTTaGAGCCATTTCCTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFFLSLL*SHFLKL
Trigger: CAGCTTCAGGAAATGGCTCAAAAGTAGAGAGAGAAA...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS CCA 90 bp GTCAACACTTTCTGCCGATCCTCTTCCCATGAAAGAAGCTGTTGCTaGTGCACTGCAACCATGTCATTGAGCTCTTTATCTCGATCTTTT +
Preference number: 5 (lower is better)
Translates to: VNTFCRSSSHERSCC*CTATMSLSSLSRSF
Trigger: AAAAGATCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCTTCTTTCATGGGAAGAGGATCGGCAGAAAGTGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS CCA 90 bp ATCATTGTCGTAAGAGCTTGTTCTCGAGCTTGTAGCTGTCCTACCTaGGCAGAAAGTTCCACTAACGTGTTGCTGAGAGTTTCGTTTCTA +
Preference number: 5 (lower is better)
Translates to: IIVVRACSRACSCPT*AESSTNVLLRVSFL
Trigger: TAGAAACGAAACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACAAGCTCGAGAACAAGCTCTTACGACAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000539171.1
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTGTTTGGCATTCCATTaGATTGGATTCAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVCLAFH*IGFKSF
Trigger: AAAGCTCTTGAATCCAATCAAATGGAATGCCAAACA...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GGGACTAATATAGACCCAGAAAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGATGTTTGGCATTCCATTaGATTGGATTCAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: GTNIDPERWGSAQLGTEGCLAFH*IGFKSF
Trigger: AAAGCTCTTGAATCCAATCAAATGGAATGCCAAACA...TCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGGTCTATATTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTCCTCTTTTAGTTTGTaGACTTCAATCTTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVSSFSL*TSILSA
Trigger: GGCACTTAAGATTGAAGTCAACAAACTAAAAGAGGA...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTCACAGTATCGATCTGTaGTTTCTTCTCTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFHSIDL*FLLFAF
Trigger: GAATGCAAAGAGAAGAAACAACAGATCGATACTGTG...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AAGATGGGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTTTGCACAATGTAATTTaGTTTTCGGGTTCAATCTGG +
Preference number: 5 (lower is better)
Translates to: KMGLCSAWDRRTSSYFPVLHNVI*FSGSIW
Trigger: CCAGATTGAACCCGAAAACAAAATTACATTGTGCAA...AACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTGACATTTTGGTGATTTaGTGTGGATCTTGCACAATG +
Preference number: 5 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFDILVI*CGSCTM
Trigger: CATTGTGCAAGATCCACACAAAATCACCAAAATGTC...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GGGCTCTGCTCAGCTTGGGACAGAAGGACCTCGAGCTATTTTCCAGTTACATTTTCCTCTTTTAGTTTGTaGACTTCAATCTTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: GLCSAWDRRTSSYFPVTFSSFSL*TSILSA
Trigger: GGCACTTAAGATTGAAGTCAACAAACTAAAAGAGGA...AAATGTAACTGGAAAATAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCTGGAGTCCAGAGCCTTaGATTCCTCCATCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: FCSQLELSAVYEELESSFWSPEP*IPPSLS
Trigger: ACTCAAAGATGGAGGAATCAAAGGCTCTGGACTCCA...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGGGAGAAAGCACGCATTGATAAAGAACATAACCAAACCTCACCCAACTTCTCTTCTTCCAGCAAGCTTTaGTTTGTGTCAGTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: REKARIDKEHNQTSPNFSSSSKL*FVSVGG
Trigger: CCCACCTACTGACACAAACAAAAGCTTGCTGGAAGA...AGAGAAGTTGGGTGAGGTTTGGTTATGTTCTTTATCAATGCGTGCTTTCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253079.11
CDS-3UTR CAA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCTCTTCCAGCAAGCTTTaGTTTGTGTCAGTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: FCSQLELSAVYEELESSFSSSKL*FVSVGG
Trigger: CCCACCTACTGACACAAACAAAAGCTTGCTGGAAGA...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS TCA 90 bp TTCCATCTGATCTTGACATTCTACATCCAGCTTTTCTGGATGTTTTaGACTTGGACAGTTGGTCAGGCCCAGGTAAACACTGACATCATG +
Preference number: 5 (lower is better)
Translates to: FHLILTFYIQLFWMF*TWTVGQAQVNTDIM
Trigger: CATGATGTCAGTGTTTACCTGGGCCTGACCAACTGTCCAAGTTCAAAACATCCAGAAAAGCTGGATGTAGAATGTCAAGATCAGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS GCA 90 bp AACACTTTCTGCCGATCCTCTTCCCATGAAAGAAGCTGTTGCTGGTaGACTGCAACCATGTCATTGAGCTCTTTATCTCGATCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: NTFCRSSSHERSCCW*TATMSLSSLSRSFN
Trigger: ATTAAAAGATCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCTTCTTTCATGGGAAGAGGATCGGCAGAAAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTCAGGTGCACCCAGATTaGAGGCGGACAATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLQVHPD*RRTILC
Trigger: GCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTG...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGCAGGTGCACCCAGATTaGAGGCGGACAATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKQVHPD*RRTILC
Trigger: GCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTG...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTGCCGGGGAGTCATGTaGTGTGCCACAGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKCRGVM*CATDAF
Trigger: GAAAGCATCTGTGGCACACAACATGACTCCCCGGCA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGATGCCGGGGAGTCATGTaGTGTGCCACAGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRCRGVM*CATDAF
Trigger: GAAAGCATCTGTGGCACACAACATGACTCCCCGGCA...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGAGCAAACGCTGGAGCTaGCTCGTGGGCGAGAAATCA +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKSKRWS*LVGEKS
Trigger: TGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAAGCAAACGCTGGAGCTaGCTCGTGGGCGAGAAATCA +
Preference number: 5 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRSKRWS*LVGEKS
Trigger: TGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCT...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TGTCTGCTTTCTGCCTTCCACATAGATGAGAAATTCGTGATCACGATGAATACTCCTTGCCCCAGCAATTaGAGTAACCAAGTACAGGTA +
Preference number: 5 (lower is better)
Translates to: CLLSAFHIDEKFVITMNTPCPSN*SNQVQV
Trigger: TACCTGTACTTGGTTACTCAAATTGCTGGGGCAAGG...AGTATTCATCGTGATCACGAATTTCTCATCTATGTGGAAGGCAGAAAGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537566.5
CDS-3UTR CAA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTCACCTTCTAATTaGCTGCAACGTTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: FCSQLELSAVYEELESSFSSPSN*LQRSSS
Trigger: ACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAACT...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCCTGGATGTTTTGAACTaGGACAGTTGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: RASLAFNCSPYLYREVFFLDVLN*DSWSGP
Trigger: TGGGCCTGACCAACTGTCCAAGTTCAAAACATCCAG...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCCCTTTCCATCTGATCTaGACATTCTACATCCAGCTT +
Preference number: 5 (lower is better)
Translates to: FCSQLELSAVYEELESSFPFHLI*TFYIQL
Trigger: AAGCTGGATGTAGAATGTCAAGATCAGATGGAAAGG...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTTGGCAATTAGCTCACTaGCCGGGGAGTCATGTTGTG +
Preference number: 5 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLWQLAH*PGSHVV
Trigger: CACAACATGACTCCCCGGCAAGTGAGCTAATTGCCA...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CAA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGATGGCAATTAGCTCACTaGCCGGGGAGTCATGTTGTG +
Preference number: 5 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRWQLAH*PGSHVV
Trigger: CACAACATGACTCCCCGGCAAGTGAGCTAATTGCCA...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS TCA 90 bp GATCTGTTGTTTCTTCTCTTTGCATTCATCGCAAGAGCTCTTGTCTaGCCTATTTTGCTGAACCAACATGGCTTCAAATTTCTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: DLLFLLFAFIARALV*PILLNQHGFKFLVL
Trigger: AAGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGCGATGAATGCAAAGAGAAGAAACAACAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCCTGCAGCTCCTTCCGTaGTTTCTCGATAGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: RASLAFNCSPYLYREVFFLQLLP*FLDSGN
Trigger: ATTTCCACTATCGAGAAACAACGGAAGGAGCTGCAG...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCTCTGTCGTCTTTTCATaGAGGTCCTCTTTTAGTTTG +
Preference number: 5 (lower is better)
Translates to: FCSQLELSAVYEELESSFSVVFS*RSSFSL
Trigger: CAAACTAAAAGAGGACCTCAATGAAAAGACGACAGA...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTCTGGATGTTTTGAACTaGGACAGTTGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLLDVLN*DSWSGP
Trigger: TGGGCCTGACCAACTGTCCAAGTTCAAAACATCCAG...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGCTGGATGTTTTGAACTaGGACAGTTGGTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKLDVLN*DSWSGP
Trigger: TGGGCCTGACCAACTGTCCAAGTTCAAAACATCCAG...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCATTGAAGCCTTTTCATaGAATGCTGGTGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: FCSQLELSAVYEELESSFIEAFS*NAGASL
Trigger: CAAAGATGCACCAGCATTCAATGAAAAGGCTTCAAT...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCTCTTCCAGCAAGCTTTaGTTTGTGTCAGTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: RASLAFNCSPYLYREVFFSSSKL*FVSVGG
Trigger: CCCACCTACTGACACAAACAAAAGCTTGCTGGAAGA...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTCTGCAGCTCCTTCCGTaGTTTCTCGATAGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLLQLLP*FLDSGN
Trigger: ATTTCCACTATCGAGAAACAACGGAAGGAGCTGCAG...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CAA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAAGAATGCGTTGCCTTTaGAGCCATTTCCTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRRMRCL*SHFLKL
Trigger: CAGCTTCAGGAAATGGCTCAAAAGGCAACGCATTCT...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGAGAATGCGTTGCCTTTaGAGCCATTTCCTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKRMRCL*SHFLKL
Trigger: CAGCTTCAGGAAATGGCTCAAAAGGCAACGCATTCT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
CDS-3UTR CAA 90 bp TTCTGCTCCCAGCTGGAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCTCCTCTTTTAGTTTGTaGACTTCAATCTTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: FCSQLELSAVYEELESSFSSFSL*TSILSA
Trigger: GGCACTTAAGATTGAAGTCAACAAACTAAAAGAGGA...GAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTCCAGCTGGGAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTCAGGCAACTTTTCTCTaGCTTGAGGCGAATGATCTC +
Preference number: 5 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLQATFL*LEANDL
Trigger: GAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCTG...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTGGAGTCCAGAGCCTTaGATTCCTCCATCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKWSPEP*IPPSLS
Trigger: ACTCAAAGATGGAGGAATCAAAGGCTCTGGACTCCA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCAGAGACCAAGGGAGGTaGTGTTTCTCTACTAAGTCT +
Preference number: 5 (lower is better)
Translates to: RASLAFNCSPYLYREVFFRDQGR*CFSTKS
Trigger: AGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCT...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTGAAGAGAAGAATGCGTaGCCTTTTGAGCCATTTCCT +
Preference number: 5 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLEEKNA*PFEPFP
Trigger: AGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTTC...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGAGAGACCAAGGGAGGTaGTGTTTCTCTACTAAGTCT +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKRDQGR*CFSTKS
Trigger: AGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCT...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TGTCTGCTTTCTGCCTTCCACATAGATGAGAAATTCGTGATCACGATGAATACTTTGCACAATGTAATTTaGTTTTCGGGTTCAATCTGG +
Preference number: 5 (lower is better)
Translates to: CLLSAFHIDEKFVITMNTLHNVI*FSGSIW
Trigger: CCAGATTGAACCCGAAAACAAAATTACATTGTGCAA...AGTATTCATCGTGATCACGAATTTCTCATCTATGTGGAAGGCAGAAAGCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000537566.5
CDS-3UTR CAA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAGTTCACCTTCTAATTaGCTGCAACGTTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLSSPSN*LQRSSS
Trigger: ACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAACT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGCTTTTGGAGAGCTGTTaGGCATTCCATTTGATTGGA +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKLLESC*AFHLIG
Trigger: TCCAATCAAATGGAATGCCAAACAGCTCTCCAAAAG...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAGTTCCACTAACGTGTaGCTGAGAGTTTCGTTTCTA +
Preference number: 5 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLSSTNV*LRVSFL
Trigger: TAGAAACGAAACTCTCAGCAACACGTTAGTGGAACT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CAA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAAGTTCCACTAACGTGTaGCTGAGAGTTTCGTTTCTA +
Preference number: 5 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRSSTNV*LRVSFL
Trigger: TAGAAACGAAACTCTCAGCAACACGTTAGTGGAACT...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000392441.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTGTGCAGTTCTGAATTaGTGCGTTCTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKCAVLN*CVLALT
Trigger: AGTCAAAGCAAGAACGCACAAATTCAGAACTGCACA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGCTTTTCTGGATGTTTaGAACTTGGACAGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKAFLDV*NLDSWS
Trigger: TGACCAACTGTCCAAGTTCAAAACATCCAGAAAAGC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAGCTTTTCTGGATGTTTaGAACTTGGACAGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRAFLDV*NLDSWS
Trigger: TGACCAACTGTCCAAGTTCAAAACATCCAGAAAAGC...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCATTGAAGCCTTTTCATaGAATGCTGGTGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: RASLAFNCSPYLYREVFFIEAFS*NAGASL
Trigger: CAAAGATGCACCAGCATTCAATGAAAAGGCTTCAAT...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp AGAGCTTCTCTAGCATTTAACTGTAGTCCGTATCTTTACAGAGAAGTCTTTTTCTCCTCTTTTAGTTTGTaGACTTCAATCTTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: RASLAFNCSPYLYREVFFSSFSL*TSILSA
Trigger: GGCACTTAAGATTGAAGTCAACAAACTAAAAGAGGA...GAAAAAGACTTCTCTGTAAAGATACGGACTACAGTTAAATGCTAGAGAAGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTCTGTCGTCTTTTCATaGAGGTCCTCTTTTAGTTTG +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKSVVFS*RSSFSL
Trigger: CAAACTAAAAGAGGACCTCAATGAAAAGACGACAGA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGCACAGTATCGATCTGTaGTTTCTTCTCTTTGCATTC +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKHSIDL*FLLFAF
Trigger: GAATGCAAAGAGAAGAAACAACAGATCGATACTGTG...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGATTCTCTACTAAGTCTTaGGTGAATATGGATGACAGC +
Preference number: 5 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRFSTKS*VNMDDS
Trigger: GCTGTCATCCATATTCACCAAAGACTTAGTAGAGAA...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTTCTCTACTAAGTCTTaGGTGAATATGGATGACAGC +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKFSTKS*VNMDDS
Trigger: GCTGTCATCCATATTCACCAAAGACTTAGTAGAGAA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGGACATTTTGGTGATTTaGTGTGGATCTTGCACAATG +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKDILVI*CGSCTM
Trigger: CATTGTGCAAGATCCACACAAAATCACCAAAATGTC...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTATTGAAGCCTTTTCATaGAATGCTGGTGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLIEAFS*NAGASL
Trigger: CAAAGATGCACCAGCATTCAATGAAAAGGCTTCAAT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTGTTTGGCATTCCATTaGATTGGATTCAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKCLAFH*IGFKSF
Trigger: AAAGCTCTTGAATCCAATCAAATGGAATGCCAAACA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS-3UTR CAA 90 bp GTTAACAAAGGGGCATTTATTCAGCACAATAGAACTTTGATATCTGCAATGCTTAATGATCTCTTCTCGTaGCTCATTATTTTCTGTCGT +
Preference number: 5 (lower is better)
Translates to: VNKGAFIQHNRTLISAMLNDLFS*LIIFCR
Trigger: ACGACAGAAAATAATGAGCAACGAGAAGAGATCATT...AAGCATTGCAGATATCAAAGTTCTATTGTGCTGAATAAATGCCCCTTTGTTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000341952.8
CDS-3UTR CAA 90 bp TCAAAGCACCTTATGTCTATTTACACAGCAAAGTCAAAAGCTAAAACCATGAGAAATGATCTCTTCTCGTaGCTCATTATTTTCTGTCGT +
Preference number: 5 (lower is better)
Translates to: SKHLMSIYTAKSKAKTMRNDLFS*LIIFCR
Trigger: ACGACAGAAAATAATGAGCAACGAGAAGAGATCATT...TCTCATGGTTTTAGCTTTTGACTTTGCTGTGTAAATAGACATAAGGTGCTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000392440.3
ENST00000392441.8
CDS-3UTR CAA 90 bp GAATTAAGTGCCGTTTATGAAGAACTAGAATCCTCTTTCAGTTTTACGGTTAAGTTGCACAATGTAATTTaGTTTTCGGGTTCAATCTGG +
Preference number: 5 (lower is better)
Translates to: ELSAVYEELESSFSFTVKLHNVI*FSGSIW
Trigger: CCAGATTGAACCCGAAAACAAAATTACATTGTGCAA...CTTAACCGTAAAACTGAAAGAGGATTCTAGTTCTTCATAAACGGCACTTAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CCA 72 bp CATAGGTGTTTCCTCCGCCCCCGGAGAAGCCCGGTGTaGGCGGCGTCACCTCAGAAACGCCATCGGCGCGCC +
Preference number: 6 (lower is better)
Translates to: HRCFLRPRRSPV*AASPQKRHRRA
Trigger: GGCGCGCCGATGGCGTTTCTGAGGTGACGCCGCCCACACCGGGCTTCTCCGGGGGCGGAGGAAACACCTATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000539171.1
CDS GCA 72 bp AGTTTCGTTTCTAGCCTGGCGCCCGGCAAGGAAGGCTaGCGGAGGGTTCATAGGTGTTTCCTCCGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: SFVSSLAPGKEG*RRVHRCFLRPR
Trigger: CCGGGGGCGGAGGAAACACCTATGAACCCTCCGGCAGCCTTCCTTGCCGGGCGCCAGGCTAGAAACGAAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539171.1
CDS TCA 72 bp GGCAGCAGTGTGCTCAGCTCCAGGTCCGTCACCATCTaGCGAGATTCCGCCAGCAAACGCTGGAGCTTGCTC +
Preference number: 6 (lower is better)
Translates to: GSSVLSSRSVTI*RDSASKRWSLL
Trigger: GAGCAAGCTCCAGCGTTTGCTGGCGGAATCTCGTCAGATGGTGACGGACCTGGAGCTGAGCACACTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS GCA 72 bp CCATCTGACGAGATTCCGCCAGCAAACGCTGGAGCTTaGTCGTGGGCGAGAAATCATCCTGGGAGGGTAACA +
Preference number: 6 (lower is better)
Translates to: PSDEIPPANAGA*SWARNHPGRVT
Trigger: TGTTACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGAATCTCGTCAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 90 bp CGAGCTTGTAGCTGTCCTACCTGGGCAGAAAGTTCCACTAACGTGTaGCTGAGAGTTTCGTTTCTAGCCTGGCGCCCGGCAAGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: RACSCPTWAESSTNV*LRVSFLAWRPARKA
Trigger: AGCCTTCCTTGCCGGGCGCCAGGCTAGAAACGAAACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACAAGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539171.1
CDS CCA 72 bp GACGAGATTCCGCCAGCAAACGCTGGAGCTTGCTCGTaGGCGAGAAATCATCCTGGGAGGGTAACACAATTG +
Preference number: 6 (lower is better)
Translates to: DEIPPANAGACS*ARNHPGRVTQL
Trigger: CAATTGTGTTACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGAATCTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 72 bp AGCTGTCCTACCTGGGCAGAAAGTTCCACTAACGTGTaGCTGAGAGTTTCGTTTCTAGCCTGGCGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: SCPTWAESSTNV*LRVSFLAWRPA
Trigger: TGCCGGGCGCCAGGCTAGAAACGAAACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539171.1
CDS TCA 72 bp CTTCCGTTGTTTCTCGATAGTGGAAATCTCAACTTCTaGCCCGATGTTCTGGCGCCCGGCAAGGAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: LPLFLDSGNLNF*PDVLAPGKEGC
Trigger: GCAGCCTTCCTTGCCGGGCGCCAGAACATCGGGTCAGAAGTTGAGATTTCCACTATCGAGAAACAACGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
CDS CCA 72 bp ATGTGGCCTGGGGCTTCAATTATGAAGTTACTCGGGTaGCAGCACTTGGAGTCACACATGCCACTTTCGCCC +
Preference number: 6 (lower is better)
Translates to: MWPGASIMKLLG*QHLESHMPLSP
Trigger: GGGCGAAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAGGCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CCA 72 bp TCTGACTTATTTGTGGCACTGCCAGTGAGATTCTCATaGCTGATGGGCAGCAGTGTGCTCAGCTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SDLFVALPVRFS*LMGSSVLSSRS
Trigger: GGACCTGGAGCTGAGCACACTGCTGCCCATCAGCCATGAGAATCTCACTGGCAGTGCCACAAATAAGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253079.11
ENST00000537566.5
CDS CAA 72 bp GGGGCTTCAATTATGAAGTTACTCGGGTGGCAGCACTaGGAGTCACACATGCCACTTTCGCCCAGACAGGCT +
Preference number: 6 (lower is better)
Translates to: GASIMKLLGWQH*ESHMPLSPRQA
Trigger: AGCCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCATAATTGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS TCA 72 bp ACTCCACGTCAGACATGTGGCCTGGGGCTTCAATTATaGAGTTACTCGGGTGGCAGCACTTGGAGTCACACA +
Preference number: 6 (lower is better)
Translates to: TPRQTCGLGLQL*SYSGGSTWSHT
Trigger: TGTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAGGCCACATGTCTGACGTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 90 bp ATGTGGCCTGGGGCTTCAATTATGAAGTTACTCGGGTGGCAGCACTaGGAGTCACACATGCCACTTTCGCCCAGACAGGCTTCATTTTTC +
Preference number: 6 (lower is better)
Translates to: MWPGASIMKLLGWQH*ESHMPLSPRQASFF
Trigger: GAAAAATGAAGCCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAGGCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CCA 72 bp GAAAATACTCATCCACTCCACGTCAGACATGTGGCCTaGGGCTTCAATTATGAAGTTACTCGGGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: ENTHPLHVRHVA*GFNYEVTRVAA
Trigger: TGCTGCCACCCGAGTAACTTCATAATTGAAGCCCCAGGCCACATGTCTGACGTGGAGTGGATGAGTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 72 bp GTGCCACAGATGCTTTCTGAACAGGTGCACCCAGATTaGAGGCGGACAATTCTCTGCATTTTGGAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: VPQMLSEQVHPD*RRTILCILEGL
Trigger: CAAGCCTTCCAAAATGCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTGTTCAGAAAGCATCTGTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 90 bp CGAGCTTGTAGCTGTCCTACCTGGGCAGAAAGTTCCACTAACGTGTaGCTGAGAGTTTCGTTTCTAGCCTCAAGGTCTTCAGAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: RACSCPTWAESSTNV*LRVSFLASRSSERR
Trigger: TCTTCTCTCTGAAGACCTTGAGGCTAGAAACGAAACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACAAGCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
CDS GCA 72 bp TGCCGATCCTCTTCCCATGAAAGAAGCTGTTGCTGGTaGACTGCAACCATGTCATTGAGCTCTTTATCTCGA +
Preference number: 6 (lower is better)
Translates to: CRSSSHERSCCW*TATMSLSSLSR
Trigger: TCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCTTCTTTCATGGGAAGAGGATCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS CCA 72 bp GTAAGAGCTTGTTCTCGAGCTTGTAGCTGTCCTACCTaGGCAGAAAGTTCCACTAACGTGTTGCTGAGAGTT +
Preference number: 6 (lower is better)
Translates to: VRACSRACSCPT*AESSTNVLLRV
Trigger: AACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACAAGCTCGAGAACAAGCTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000539171.1
CDS CAA 72 bp AGCTGTCCTACCTGGGCAGAAAGTTCCACTAACGTGTaGCTGAGAGTTTCGTTTCTAGCCTCAAGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: SCPTWAESSTNV*LRVSFLASRSS
Trigger: TGAAGACCTTGAGGCTAGAAACGAAACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
CDS CAA 90 bp TCTGAACAGGTGCACCCAGATTTGAGGCGGACAATTCTCTGCATTTaGGAAGGCTTGAAAATACTCATCCACTCCACGTCAGACATGTGG +
Preference number: 6 (lower is better)
Translates to: SEQVHPDLRRTILCI*EGLKILIHSTSDMW
Trigger: CCACATGTCTGACGTGGAGTGGATGAGTATTTTCAAGCCTTCCAAAATGCAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS TCA 72 bp TTGAACTTGGACAGTTGGTCAGGCCCAGGTAAACACTaGCATCATGCCACTGCTTCTCATCAGATAAAGTGG +
Preference number: 6 (lower is better)
Translates to: LNLDSWSGPGKH*HHATASHQIKW
Trigger: CCACTTTATCTGATGAGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCCTGACCAACTGTCCAAGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CCA 72 bp TTCTGCCGATCCTCTTCCCATGAAAGAAGCTGTTGCTaGTGCACTGCAACCATGTCATTGAGCTCTTTATCT +
Preference number: 6 (lower is better)
Translates to: FCRSSSHERSCC*CTATMSLSSLS
Trigger: AGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCTTCTTTCATGGGAAGAGGATCGGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS CCA 72 bp TCTTCTCTCAAGGCAGATTTTGAAGAACCCAAAGAGTaGGAATCTTGGATGGCAATTAGCTCACTTGCCGGG +
Preference number: 6 (lower is better)
Translates to: SSLKADFEEPKE*ESWMAISSLAG
Trigger: CCCGGCAAGTGAGCTAATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTCAAAATCTGCCTTGAGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CCA 72 bp AAACGCTGGAGCTTGCTCGTGGGCGAGAAATCATCCTaGGAGGGTAACACAATTGAAGCCTTTTCATTGAAT +
Preference number: 6 (lower is better)
Translates to: KRWSLLVGEKSS*EGNTIEAFSLN
Trigger: ATTCAATGAAAAGGCTTCAATTGTGTTACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS TCA 72 bp ACTTTCGCCCAGACAGGCTTCATTTTTCTGGCAGCATaGGATTTCGGACCTTTCCATCTGATCTTGACATTC +
Preference number: 6 (lower is better)
Translates to: TFAQTGFIFLAA*DFGPFHLILTF
Trigger: GAATGTCAAGATCAGATGGAAAGGTCCGAAATCTCATGCTGCCAGAAAAATGAAGCCTGTCTGGGCGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 72 bp AAGAGGACTCCGTCTCATCTTCTCTCAAGGCAGATTTaGAAGAACCCAAAGAGTGGGAATCTTGGATGGCAA +
Preference number: 6 (lower is better)
Translates to: KRTPSHLLSRQI*KNPKSGNLGWQ
Trigger: TTGCCATCCAAGATTCCCACTCTTTGGGTTCTTCAAAATCTGCCTTGAGAGAAGATGAGACGGAGTCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS GCA 72 bp ATACAAGTCTCCGCCATCTTGGCATCACGTAGGGCATaGTCTAGCATTTTAAATTTACCCGAACAATCTGCA +
Preference number: 6 (lower is better)
Translates to: IQVSAILASRRA*SSILNLPEQSA
Trigger: TGCAGATTGTTCGGGTAAATTTAAAATGCTAGAGCATGCCCTACGTGATGCCAAGATGGCGGAGACTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
CDS CAA 72 bp GATCTTGACATTCTACATCCAGCTTTTCTGGATGTTTaGAACTTGGACAGTTGGTCAGGCCCAGGTAAACAC +
Preference number: 6 (lower is better)
Translates to: DLDILHPAFLDV*NLDSWSGPGKH
Trigger: GTGTTTACCTGGGCCTGACCAACTGTCCAAGTTCAAAACATCCAGAAAAGCTGGATGTAGAATGTCAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 90 bp TCTTCCCATGAAAGAAGCTGTTGCTGGTGCACTGCAACCATGTCATaGAGCTCTTTATCTCGATCTTTTAATTCTCCAATGAGCAACTGC +
Preference number: 6 (lower is better)
Translates to: SSHERSCCWCTATMS*SSLSRSFNSPMSNC
Trigger: GCAGTTGCTCATTGGAGAATTAAAAGATCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCTTCTTTCATGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS CAA 90 bp TTTCCTCCCAGAGACCAAGGGAGGTTGTGTTTCTCTACTAAGTCTTaGGTGAATATGGATGACAGCGTAATTACACTTTTCTCCCCAAAC +
Preference number: 6 (lower is better)
Translates to: FPPRDQGRLCFSTKS*VNMDDSVITLFSPN
Trigger: GTTTGGGGAGAAAAGTGTAATTACGCTGTCATCCATATTCACCAAAGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCTGGGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 90 bp TTTTATTGGAAGAGGACTCCGTCTCATCTTCTCTCAAGGCAGATTTaGAAGAACCCAAAGAGTGGGAATCTTGGATGGCAATTAGCTCAC +
Preference number: 6 (lower is better)
Translates to: FYWKRTPSHLLSRQI*KNPKSGNLGWQLAH
Trigger: GTGAGCTAATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTCAAAATCTGCCTTGAGAGAAGATGAGACGGAGTCCTCTTCCAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS GCA 72 bp CCCCAAACACAGTATCGATCTGTTGTTTCTTCTCTTTaGATTCATCGCAAGAGCTCTTGTCTGACCTATTTT +
Preference number: 6 (lower is better)
Translates to: PQTQYRSVVSSL*IHRKSSCLTYF
Trigger: AAAATAGGTCAGACAAGAGCTCTTGCGATGAATGCAAAGAGAAGAAACAACAGATCGATACTGTGTTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 72 bp GAAAGAAGCTGTTGCTGGTGCACTGCAACCATGTCATaGAGCTCTTTATCTCGATCTTTTAATTCTCCAATG +
Preference number: 6 (lower is better)
Translates to: ERSCCWCTATMS*SSLSRSFNSPM
Trigger: CATTGGAGAATTAAAAGATCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392441.8
ENST00000537566.5
CDS CAA 72 bp AGTAAAAAGCAATTCATCGTGCAGGCAACTTTTCTCTaGCTTGAGGCGAATGATCTCTTCTCGTTGCTCATT +
Preference number: 6 (lower is better)
Translates to: SKKQFIVQATFL*LEANDLFSLLI
Trigger: AATGAGCAACGAGAAGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCTGCACGATGAATTGCTTTTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
CDS CAA 72 bp CTGATAAACACATGTCTCTGCTGGAGTCCAGAGCCTTaGATTCCTCCATCTTTGAGTCATACATCTGTATTA +
Preference number: 6 (lower is better)
Translates to: LINTCLCWSPEP*IPPSLSHTSVL
Trigger: TAATACAGATGTATGACTCAAAGATGGAGGAATCAAAGGCTCTGGACTCCAGCAGAGACATGTGTTTATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 72 bp TCCCCAAACACAGTATCGATCTGTTGTTTCTTCTCTTaGCATTCATCGCAAGAGCTCTTGTCTGACCTATTT +
Preference number: 6 (lower is better)
Translates to: SPNTVSICCFFS*HSSQELLSDLF
Trigger: AAATAGGTCAGACAAGAGCTCTTGCGATGAATGCAAAGAGAAGAAACAACAGATCGATACTGTGTTTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS TCA 72 bp TTTCTTCTCTTTGCATTCATCGCAAGAGCTCTTGTCTaGCCTATTTTGCTGAACCAACATGGCTTCAAATTT +
Preference number: 6 (lower is better)
Translates to: FLLFAFIARALV*PILLNQHGFKF
Trigger: AAATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGCGATGAATGCAAAGAGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5
CDS CAA 72 bp AATTACACTTTTCTCCCCAAACACAGTATCGATCTGTaGTTTCTTCTCTTTGCATTCATCGCAAGAGCTCTT +
Preference number: 6 (lower is better)
Translates to: NYTFLPKHSIDL*FLLFAFIARAL
Trigger: AAGAGCTCTTGCGATGAATGCAAAGAGAAGAAACAACAGATCGATACTGTGTTTGGGGAGAAAAGTGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253079.11
ENST00000341952.8
ENST00000392440.3
ENST00000392441.8
ENST00000537566.5