Pregenerated sensors for CCDC61 (Homo sapiens)
Ensembl gene IDs: ENSG00000104983Ensembl transcript IDs: ENST00000536603.5, ENST00000594087.1, ENST00000594672.5, ENST00000595358.5, ENST00000596161.5, ENST00000596687.5, ENST00000599044.1, ENST00000601763.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGCCTTCGCCTCCTCGAGCTCCTTGGCCAGACGGCGGCAGTCCTaGCCGCGACGGCCGGCCACCCTGTGCCCGAGGCCGCGCTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: DAFASSSSLARRRQS*PRRPATLCPRPRSC Trigger: GCAGGAGCGCGGCCTCGGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAGGCGAAGGCATC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR TCA 90 bp | CATCCAGCCCTTGCAGGCGGCCCAGTTCCTCCTTCAGTGACCGGATaGTGCCCTGCAGAACCACGGGGTCTGGCTTGCCCTGGTACGGGA | + |
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Preference number: 1 (lower is better) Translates to: HPALAGGPVPPSVTG*CPAEPRGLACPGTG Trigger: TCCCGTACCAGGGCAAGCCAGACCCCGTGGTTCTGCAGGGCATCATCCGGTCACTGAAGGAGGAACTGGGCCGCCTGCAAGGGCTGGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR CCA 90 bp | TCCCGCAGATGCCAGATCTCATTCTCCCGGGTGTCCCGAGTGTTCTaGCCATCCAGCCCTTGCAGGCGGCCCAGTTCCTCCTTCAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: SRRCQISFSRVSRVF*PSSPCRRPSSSFSD Trigger: GTCACTGAAGGAGGAACTGGGCCGCCTGCAAGGGCTGGATGGCCAGAACACTCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCCTGTGCCCGGGTCTGGCTTGCCCTaGTACGGGAGGGGCAGCGGG | + |
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Preference number: 2 (lower is better) Translates to: LLGQTAAVLAATAGHPVPGSGLP*YGRGSG Trigger: CCCGCTGCCCCTCCCGTACCAGGGCAAGCCAGACCC...GGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCGAGCTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCAGAACCACGGGGTCTaGCTTGCCCTGGTACGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LLELLGQTAAVLAATAGHQNHGV*LALVRE Trigger: CTCCCGTACCAGGGCAAGCCAGACCCCGTGGTTCTG...GTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCCTGTGCCCAGTTCCTCCTTCAGTaGCCGGATGATGCCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: APWPDGGSPGRDGRPPCAQFLLQ*PDDALQ Trigger: CTGCAGGGCATCATCCGGTCACTGAAGGAGGAACTG...GGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR-3UTR GCA 90 bp | CGCGACACCTGCTCCCGCAGATGCCAGATCTCATTCTCCCGGGTGTCCCGAGTGCCACGGGGTCTGGCTTaGCCTGGTACGGGAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RDTCSRRCQISFSRVSRVPRGLA*PGTGGA Trigger: TGCCCCTCCCGTACCAGGGCAAGCCAGACCCCGTGG...CACTCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGAGCAGGTGTCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR-3UTR TCA 90 bp | GCCAGATCTCATTCTCCCGGGTGTCCCGAGTGTTCTGGCCATCCAGCCCTTGCAGGTAGCGCTTGGAGTTaGGCTGGGCCGACCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: ARSHSPGCPECSGHPALAGSAWS*AGPTWG Trigger: CCCCCAGGTCGGCCCAGCTCAACTCCAAGCGCTACC...TGCAAGGGCTGGATGGCCAGAACACTCGGGACACCCGGGAGAATGAGATCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR-3UTR GCA 90 bp | CGCGACACCTGCTCCCGCAGATGCCAGATCTCATTCTCCCGGGTGTCCCGAGTGGACCGGATGATGCCCTaGAGAACCACGGGGTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RDTCSRRCQISFSRVSRVDRMMP*RTTGSG Trigger: GCCAGACCCCGTGGTTCTGCAGGGCATCATCCGGTC...CACTCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGAGCAGGTGTCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR-3UTR TCA 90 bp | TCATTCTCCCGGGTGTCCCGAGTGTTCTGGCCATCCAGCCCTTGCAGGCGGCCCACTCCACGGAGTAGATaGGGATCAGGTAGCGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SFSRVSRVFWPSSPCRRPTPRSR*GSGSAW Trigger: CCAAGCGCTACCTGATCCTCATCTACTCCGTGGAGT...GGGCCGCCTGCAAGGGCTGGATGGCCAGAACACTCGGGACACCCGGGAGAATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR-3UTR CCA 90 bp | ACACCTGCTCCCGCAGATGCCAGATCTCATTCTCCCGGGTGTCCCGAGTGTTCTCGCTTGGAGTTGAGCTaGGCCGACCTGGGGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TPAPADARSHSPGCPECSRLELS*ADLGAK Trigger: CTTGGCCCCCAGGTCGGCCCAGCTCAACTCCAAGCG...AGAACACTCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGAGCAGGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR CCA 72 bp | GCCTCCTCGAGCTCCTTGGCCAGACGGCGGCAGTCCTaGCCGCGACGGCCGGCCACCCTGTGCCCGAGGCCG | + |
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Preference number: 3 (lower is better) Translates to: ASSSSLARRRQS*PRRPATLCPRP Trigger: CGGCCTCGGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR-3UTR CAA 90 bp | CCTTCGCCTCCTCGAGCTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCTGGCCATCCAGCCCTaGCAGGCGGCCCAGTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: PSPPRAPWPDGGSPGRDGLAIQP*QAAQFL Trigger: GAGGAACTGGGCCGCCTGCAAGGGCTGGATGGCCAG...GCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAGGCGAAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR GCA 72 bp | CAGCGTCTTCAGCCGGGCGCGCAGGCTCCGCTCCGATaGCTTCGCCTCCTCGAGCTCCTTGGCCAGACGGCG | + |
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Preference number: 3 (lower is better) Translates to: QRLQPGAQAPLR*LRLLELLGQTA Trigger: CGCCGTCTGGCCAAGGAGCTCGAGGAGGCGAAGGCATCGGAGCGGAGCCTGCGCGCCCGGCTGAAGACGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR-3UTR CAA 90 bp | ACACCTGCTCCCGCAGATGCCAGATCTCATTCTCCCGGGTGTCCCGAGTGTTCTACCACGGGGTCTGGCTaGCCCTGGTACGGGAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: TPAPADARSHSPGCPECSTTGSG*PWYGRG Trigger: GCCCCTCCCGTACCAGGGCAAGCCAGACCCCGTGGT...AGAACACTCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGAGCAGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR TCA 72 bp | CTTGCAGGCGGCCCAGTTCCTCCTTCAGTGACCGGATaGTGCCCTGCAGAACCACGGGGTCTGGCTTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: LAGGPVPPSVTG*CPAEPRGLACP Trigger: AGGGCAAGCCAGACCCCGTGGTTCTGCAGGGCATCATCCGGTCACTGAAGGAGGAACTGGGCCGCCTGCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| 3UTR GCA 72 bp | TTCTCGGACGCCAGGCGCGACACCTGCTCCCGCAGATaGCAGATCTCATTCTCCCGGGTGTCCCGAGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: FSDARRDTCSRR*QISFSRVSRVF Trigger: GAACACTCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGAGCAGGTGTCGCGCCTGGCGTCCGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR CCA 90 bp | TTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCCTGTGCCCGAGGGGGTCTGGCTTGCCCTaGTACGGGAGGGGCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LARRRQSWPRRPATLCPRGSGLP*YGRGSG Trigger: CCCGCTGCCCCTCCCGTACCAGGGCAAGCCAGACCC...CCTCGGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR GCA 90 bp | CTCCTCGAGCTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCCACGGGGTCTGGCTTaGCCTGGTACGGGAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LLELLGQTAAVLAATAGHPRGLA*PGTGGA Trigger: TGCCCCTCCCGTACCAGGGCAAGCCAGACCCCGTGG...GTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR GCA 90 bp | CTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCCTGTGCCCCAGGCTCCGCTCCGATaGCTTCGCCTCCTCGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LLGQTAAVLAATAGHPVPQAPLR*LRLLEL Trigger: GAGCTCGAGGAGGCGAAGGCATCGGAGCGGAGCCTG...GGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR CCA 90 bp | CTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCCTGTGCCCCAGAACCACGGGGTCTaGCTTGCCCTGGTACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGQTAAVLAATAGHPVPQNHGV*LALVRE Trigger: CTCCCGTACCAGGGCAAGCCAGACCCCGTGGTTCTG...GGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR TCA 90 bp | GATGCCCTGCAGAACCACGGGGTCTGGCTTGCCCTGGTACGGGAGGGGCAGCGGGGTAGCGCTTGGAGTTaGGCTGGGCCGACCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DALQNHGVWLALVREGQRGSAWS*AGPTWG Trigger: CCCCCAGGTCGGCCCAGCTCAACTCCAAGCGCTACC...CCGCTGCCCCTCCCGTACCAGGGCAAGCCAGACCCCGTGGTTCTGCAGGGCATC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR GCA 90 bp | GCCTTCGCCTCCTCGAGCTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGATCACCCGCACGGCATaGTCCACACCCCGGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: AFASSSSLARRRQSWPRRITRTA*STPRKT Trigger: CGTCTTCCGGGGTGTGGAGCATGCCGTGCGGGTGAT...CCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAGGCGAAGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR GCA 90 bp | TTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCCTGTGCCCGAGGCCCCCTCTTGTACAATaGCAGCTCGCTGGTCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: LARRRQSWPRRPATLCPRPPLVQ*QLAGQR Trigger: ACGCTGACCAGCGAGCTGGCATTGTACAAGAGGGGG...CCTCGGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR TCA 90 bp | CTCCTCGAGCTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCAGTTCCTCCTTCAGTaGCCGGATGATGCCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLELLGQTAAVLAATAGHQFLLQ*PDDALQ Trigger: CTGCAGGGCATCATCCGGTCACTGAAGGAGGAACTG...GTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR GCA 90 bp | CGCGACACCTGCTCCCGCAGATGCCAGATCTCATTCTCCCGGGTGTCCCGAGTGCGCGATCGGCCCAGCTaGGCCTCCAGCTCCCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RDTCSRRCQISFSRVSRVRDRPS*ASSSRF Trigger: GAAGCGGGAGCTGGAGGCGCAGCTGGGCCGATCGCG...CACTCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGAGCAGGTGTCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR CCA 90 bp | CTCCCGCTTCTCGGACGCCAGGCGCGACACCTGCTCCCGCAGATGCCAGATCTCCCTCCTCGAGCTCCTTaGCCAGACGGCGGCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LPLLGRQARHLLPQMPDLPPRAP*PDGGSP Trigger: AGGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAGG...GAGATCTGGCATCTGCGGGAGCAGGTGTCGCGCCTGGCGTCCGAGAAGCGGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR TCA 90 bp | CCTTCGCCTCCTCGAGCTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCACTCCACGGAGTAGATaGGGATCAGGTAGCGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PSPPRAPWPDGGSPGRDGTPRSR*GSGSAW Trigger: CCAAGCGCTACCTGATCCTCATCTACTCCGTGGAGT...GCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAGGCGAAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR CCA 90 bp | ATTCTCCCGGGTGTCCCGAGTGTTCTGGCCATCCAGCCCTTGCAGGCGGCCCAGAACTCGCCCCGCCACTaGTCAGCCGTCATCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: ILPGVPSVLAIQPLQAAQNSPRH*SAVIRS Trigger: GGACCGGATGACGGCTGACCAGTGGCGGGGCGAGTT...CTGGGCCGCCTGCAAGGGCTGGATGGCCAGAACACTCGGGACACCCGGGAGAAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR CCA 90 bp | AGGCGCGACACCTGCTCCCGCAGATGCCAGATCTCATTCTCCCGGGTGTCCCGACGCTTGGAGTTGAGCTaGGCCGACCTGGGGGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RRDTCSRRCQISFSRVSRRLELS*ADLGAK Trigger: CTTGGCCCCCAGGTCGGCCCAGCTCAACTCCAAGCG...TCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGAGCAGGTGTCGCGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR TCA 90 bp | GATGCCCTGCAGAACCACGGGGTCTGGCTTGCCCTGGTACGGGAGGGGCAGCGGCAGGTCCAGGGTGACTaGCTCACTACTAGCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: DALQNHGVWLALVREGQRQVQGD*LTTSQH Trigger: ATGCTGGCTAGTAGTGAGTCAGTCACCCTGGACCTG...CCGCTGCCCCTCCCGTACCAGGGCAAGCCAGACCCCGTGGTTCTGCAGGGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR CCA 90 bp | GACACCTGCTCCCGCAGATGCCAGATCTCATTCTCCCGGGTGTCCCGAGTGTTCTGCAGGCCAGCCGGCTaGTCCATGGCCAAGGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: DTCSRRCQISFSRVSRVFCRPAG*SMAKVA Trigger: AGCAACCTTGGCCATGGACCAGCCGGCTGGCCTGCA...GAACACTCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGAGCAGGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR GCA 90 bp | AGTTCCTCCTTCAGTGACCGGATGATGCCCTGCAGAACCACGGGGTCTGGCTTGGACCGGATGATGCCCTaGAGAACCACGGGGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSSFSDRMMPCRTTGSGLDRMMP*RTTGSG Trigger: GCCAGACCCCGTGGTTCTGCAGGGCATCATCCGGTC...CAAGCCAGACCCCGTGGTTCTGCAGGGCATCATCCGGTCACTGAAGGAGGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR TCA 90 bp | ACACCTGCTCCCGCAGATGCCAGATCTCATTCTCCCGGGTGTCCCGAGTGTTCTCCTTCAGTGACCGGATaGTGCCCTGCAGAACCACGG | + |
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Preference number: 4 (lower is better) Translates to: TPAPADARSHSPGCPECSPSVTG*CPAEPR Trigger: CCGTGGTTCTGCAGGGCATCATCCGGTCACTGAAGG...AGAACACTCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGAGCAGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR GCA 90 bp | ACACCTGCTCCCGCAGATGCCAGATCTCATTCTCCCGGGTGTCCCGAGTGTTCTTCCAGCTCCAGCACCTaGCCAGAAACCATCACCCGC | + |
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Preference number: 4 (lower is better) Translates to: TPAPADARSHSPGCPECSSSSST*PETITR Trigger: GCGGGTGATGGTTTCTGGGCAGGTGCTGGAGCTGGA...AGAACACTCGGGACACCCGGGAGAATGAGATCTGGCATCTGCGGGAGCAGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR CCA 90 bp | AGTTCCTCCTTCAGTGACCGGATGATGCCCTGCAGAACCACGGGGTCTGGCTTGACAATGCCAGCTCGCTaGTCAGCGTCTTCAGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SSSFSDRMMPCRTTGSGLTMPAR*SASSAG Trigger: CCCGGCTGAAGACGCTGACCAGCGAGCTGGCATTGT...CAAGCCAGACCCCGTGGTTCTGCAGGGCATCATCCGGTCACTGAAGGAGGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR GCA 90 bp | AGTTCCTCCTTCAGTGACCGGATGATGCCCTGCAGAACCACGGGGTCTGGCTTGGTCCATGGCCAAGGTTaGTTCTCCACTAGCAACCCT | + |
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Preference number: 4 (lower is better) Translates to: SSSFSDRMMPCRTTGSGLVHGQG*FSTSNP Trigger: AGGGTTGCTAGTGGAGAAGCAACCTTGGCCATGGAC...CAAGCCAGACCCCGTGGTTCTGCAGGGCATCATCCGGTCACTGAAGGAGGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS CCA 90 bp | CCCGGGCCCCCGCTGCTCACCTCCTTGGCCAGACGGCGGCAGTCCTaGCCGCGACGGCCGGCCACCCTGTGCCCGAGGCCGCGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: PGPPLLTSLARRRQS*PRRPATLCPRPRSC Trigger: GCAGGAGCGCGGCCTCGGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGGTGAGCAGCGGGGGCCCGGG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599044.1 |
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| CDS-3UTR CAA 90 bp | TCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCCTGTGCCCGACCACGGGGTCTGGCTaGCCCTGGTACGGGAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: SLARRRQSWPRRPATLCPTTGSG*PWYGRG Trigger: GCCCCTCCCGTACCAGGGCAAGCCAGACCCCGTGGT...CGGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR CAA 90 bp | TCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACCCTGTGCCCGCTGGCCATCCAGCCCTaGCAGGCGGCCCAGTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: SLARRRQSWPRRPATLCPLAIQP*QAAQFL Trigger: GAGGAACTGGGCCGCCTGCAAGGGCTGGATGGCCAG...CGGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS-3UTR CAA 90 bp | CTCCTCGAGCTCCTTGGCCAGACGGCGGCAGTCCTGGCCGCGACGGCCGGCCACGCCTCCTCGAGCTCCTaGGCCAGACGGCGGCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLELLGQTAAVLAATAGHASSSS*ARRRQS Trigger: GGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAGGC...GTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGCTCGAGGAG 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596687.5 |
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| CDS CCA 90 bp | GCACCGGCGGAGTCCGCCTCCCCCTCTTGTACAATGCCAGCTCGCTaGTCAGCGTCTTCAGCCGGGCGCGCAGGCTCCGCTCCGATGCCT | + |
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Preference number: 5 (lower is better) Translates to: APAESASPSCTMPAR*SASSAGRAGSAPMP Trigger: AGGCATCGGAGCGGAGCCTGCGCGCCCGGCTGAAGACGCTGACCAGCGAGCTGGCATTGTACAAGAGGGGGAGGCGGACTCCGCCGGTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000595358.5 |
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| CDS GCA 90 bp | TCTGGCGAGACCAGGAGACGGACGGACCGTCCCCGCTTCCCCCACTaGCTAAGCGGTTCCGCTGCTGCTGCTTCATCTGGATCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SGETRRRTDRPRFPH*LSGSAAAASSGSLS Trigger: AGAGAGAGATCCAGATGAAGCAGCAGCAGCGGAACCGCTTAGGCAGTGGGGGAAGCGGGGACGGTCCGTCCGTCTCCTGGTCTCGCCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000595358.5 |
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| CDS CCA 90 bp | TCTGGATCTCTCTCTGCTTCCTTTCCTTGGCTTTCACAAAGGCCGTaGGGTCGAAGCGGAGCGCGCGACCACCTGTGGGCGAGGGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: SGSLSASFPWLSQRP*GRSGARDHLWARAR Trigger: CCTCGCCCTCGCCCACAGGTGGTCGCGCGCTCCGCTTCGACCCCACGGCCTTTGTGAAAGCCAAGGAAAGGAAGCAGAGAGAGATCCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595358.5 |
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| CDS GCA 90 bp | GGTGACCCCCTCTGGAGAGCGACTCAGAGAAATCCTCCAAATCGCTaGAGGAGCTGGCAGACGAGCAGCGGCTGCGGAAACTGTCCACTG | + |
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Preference number: 5 (lower is better) Translates to: GDPLWRATQRNPPNR*RSWQTSSGCGNCPL Trigger: CAGTGGACAGTTTCCGCAGCCGCTGCTCGTCTGCCAGCTCCTGCAGCGATTTGGAGGATTTCTCTGAGTCGCTCTCCAGAGGGGGTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS TCA 90 bp | GGTGGCCTGATATTCTGGGAGAAGCTGATCCCAGGAGAGGAAAGGTaGGCCCACCCCAGGCAGGCACACTCACAGCCAGCATCGAACTCG | + |
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Preference number: 5 (lower is better) Translates to: GGLIFWEKLIPGEER*AHPRQAHSQPASNS Trigger: CGAGTTCGATGCTGGCTGTGAGTGTGCCTGCCTGGGGTGGGCTCACCTTTCCTCTCCTGGGATCAGCTTCTCCCAGAATATCAGGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596161.5 |
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| CDS GCA 90 bp | CCGCATGTCCAGTCGGTTCATGTACTCCTGCAAGGCCTTCAGGCGTaGGTCTATTTCGGCCATGTCAGCCGCCTGGTGCTCCGAGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: PHVQSVHVLLQGLQA*VYFGHVSRLVLRAV Trigger: TACAGCTCGGAGCACCAGGCGGCTGACATGGCCGAAATAGACGCACGCCTGAAGGCCTTGCAGGAGTACATGAACCGACTGGACATGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS CCA 90 bp | CTCTGGAGAGCGACTCAGAGAAATCCTCCAAATCGCTGCAGGAGCTaGCAGACGAGCAGCGGCTGCGGAAACTGTCCACTGAGGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LWRATQRNPPNRCRS*QTSSGCGNCPLRSC Trigger: GCAGCTCCTCAGTGGACAGTTTCCGCAGCCGCTGCTCGTCTGCCAGCTCCTGCAGCGATTTGGAGGATTTCTCTGAGTCGCTCTCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS GCA 90 bp | CCTTCTCCACGTTATGACCGCATGTCCAGTCGGTTCATGTACTCCTaGAAGGCCTTCAGGCGTGCGTCTATTTCGGCCATGTCAGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: PSPRYDRMSSRFMYS*KAFRRASISAMSAA Trigger: GGCGGCTGACATGGCCGAAATAGACGCACGCCTGAAGGCCTTGCAGGAGTACATGAACCGACTGGACATGCGGTCATAACGTGGAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536603.5 ENST00000595358.5 |
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| CDS GCA 90 bp | GACGTAGTCCACCTGCAGGCCAGCCGGCTGGTCCATGGCCAAGGTTaGTGGCAGGATGAATGTCCCATCAACTGGGTTTGGAGGTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: DVVHLQASRLVHGQG*WQDECPINWVWRLK Trigger: TTTCAACCTCCAAACCCAGTTGATGGGACATTCATCCTGCCAGCAACCTTGGCCATGGACCAGCCGGCTGGCCTGCAGGTGGACTACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS CCA 90 bp | GTAGTCCACCTGCAGGCCAGCCGGCTGGTCCATGGCCAAGGTTGCTaGCAGGATGAATGTCCCATCAACTGGGTTTGGAGGTTGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: VVHLQASRLVHGQGC*QDECPINWVWRLKG Trigger: TCCTTTCAACCTCCAAACCCAGTTGATGGGACATTCATCCTGCCAGCAACCTTGGCCATGGACCAGCCGGCTGGCCTGCAGGTGGACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS TCA 90 bp | CCTGCAGGCCAGCCGGCTGGTCCATGGCCAAGGTTGCTGGCAGGATaGATGTCCCATCAACTGGGTTTGGAGGTTGAAAGGAAGAAATCG | + |
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Preference number: 5 (lower is better) Translates to: PAGQPAGPWPRLLAG*MSHQLGLEVERKKS Trigger: CGATTTCTTCCTTTCAACCTCCAAACCCAGTTGATGGGACATTCATCCTGCCAGCAACCTTGGCCATGGACCAGCCGGCTGGCCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS CCA 90 bp | CTGGTCCATGGCCAAGGTTGCTGGCAGGATGAATGTCCCATCAACTaGGTTTGGAGGTTGAAAGGAAGAAATCGCAAGATTGGTTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LVHGQGCWQDECPIN*VWRLKGRNRKIGLG Trigger: TCCCAAACCAATCTTGCGATTTCTTCCTTTCAACCTCCAAACCCAGTTGATGGGACATTCATCCTGCCAGCAACCTTGGCCATGGACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS CCA 90 bp | CATGGCCAAGGTTGCTGGCAGGATGAATGTCCCATCAACTGGGTTTaGAGGTTGAAAGGAAGAAATCGCAAGATTGGTTTGGGACAAGTT | + |
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Preference number: 5 (lower is better) Translates to: HGQGCWQDECPINWV*RLKGRNRKIGLGQV Trigger: AACTTGTCCCAAACCAATCTTGCGATTTCTTCCTTTCAACCTCCAAACCCAGTTGATGGGACATTCATCCTGCCAGCAACCTTGGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS CCA 72 bp | CCGCTGCTCACCTCCTTGGCCAGACGGCGGCAGTCCTaGCCGCGACGGCCGGCCACCCTGTGCCCGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: PLLTSLARRRQS*PRRPATLCPRP Trigger: CGGCCTCGGGCACAGGGTGGCCGGCCGTCGCGGCCAGGACTGCCGCCGTCTGGCCAAGGAGGTGAGCAGCGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599044.1 |
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| CDS GCA 72 bp | CTGCACCGGCGGAGTCCGCCTCCCCCTCTTGTACAATaGCAGCTCGCTGGTCAGCGTCTTCAGCCGGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: LHRRSPPPPLVQ*QLAGQRLQPGA Trigger: CGCGCCCGGCTGAAGACGCTGACCAGCGAGCTGGCATTGTACAAGAGGGGGAGGCGGACTCCGCCGGTGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000595358.5 |
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| CDS CCA 72 bp | GAGTCCGCCTCCCCCTCTTGTACAATGCCAGCTCGCTaGTCAGCGTCTTCAGCCGGGCGCGCAGGCTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: ESASPSCTMPAR*SASSAGRAGSA Trigger: AGCGGAGCCTGCGCGCCCGGCTGAAGACGCTGACCAGCGAGCTGGCATTGTACAAGAGGGGGAGGCGGACTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000595358.5 |
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| CDS CCA 72 bp | GAGACTTCATATTGGACCCACTCCAGGGCGTTGGGCTaGGAGGCTTCCCACGGCGGCGGTGACCCCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ETSYWTHSRALG*EASHGGGDPLW Trigger: CCAGAGGGGGTCACCGCCGCCGTGGGAAGCCTCCCAGCCCAACGCCCTGGAGTGGGTCCAATATGAAGTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS CCA 72 bp | GCACACTCACAGCCAGCATCGAACTCGCCCCGCCACTaGTCAGCCGTCATCCGGTCCTCCACCTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AHSQPASNSPRH*SAVIRSSTSSS Trigger: GGAGCTGGAGGTGGAGGACCGGATGACGGCTGACCAGTGGCGGGGCGAGTTCGATGCTGGCTGTGAGTGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596161.5 |
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| CDS GCA 72 bp | ACCAGGAGACGGACGGACCGTCCCCGCTTCCCCCACTaGCTAAGCGGTTCCGCTGCTGCTGCTTCATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TRRRTDRPRFPH*LSGSAAAASSG Trigger: TCCAGATGAAGCAGCAGCAGCGGAACCGCTTAGGCAGTGGGGGAAGCGGGGACGGTCCGTCCGTCTCCTGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000595358.5 |
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| CDS GCA 72 bp | CCAAATCGCTGCAGGAGCTGGCAGACGAGCAGCGGCTaGGGAAACTGTCCACTGAGGAGCTGCGGTTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: PNRCRSWQTSSG*GNCPLRSCGFG Trigger: CCCGAAACCGCAGCTCCTCAGTGGACAGTTTCCGCAGCCGCTGCTCGTCTGCCAGCTCCTGCAGCGATTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS CCA 72 bp | CTCTCTGCTTCCTTTCCTTGGCTTTCACAAAGGCCGTaGGGTCGAAGCGGAGCGCGCGACCACCTGTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LSASFPWLSQRP*GRSGARDHLWA Trigger: CGCCCACAGGTGGTCGCGCGCTCCGCTTCGACCCCACGGCCTTTGTGAAAGCCAAGGAAAGGAAGCAGAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595358.5 |
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| CDS GCA 72 bp | AGGCGTGCGTCTATTTCGGCCATGTCAGCCGCCTGGTaGTCCGAGCTGTACTCTTTGATGGGGACCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RRASISAMSAAW*SELYSLMGTQP Trigger: GGGCTGGGTCCCCATCAAAGAGTACAGCTCGGAGCACCAGGCGGCTGACATGGCCGAAATAGACGCACGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS CCA 72 bp | TCTTCAATGAAGCCAGCATCGAACTCGCCCCGCCACTaGTCAGCCGTCATCCGGTCCTCCACCTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSMKPASNSPRH*SAVIRSSTSSS Trigger: GGAGCTGGAGGTGGAGGACCGGATGACGGCTGACCAGTGGCGGGGCGAGTTCGATGCTGGCTTCATTGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000594672.5 ENST00000595358.5 ENST00000599044.1 |
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| CDS CCA 72 bp | CTGCAGGCCAGCCGGCTGGTCCATGGCCAAGGTTGCTaGCAGGATGAATGTCCCATCAACTGGGTTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LQASRLVHGQGC*QDECPINWVWR Trigger: CCTCCAAACCCAGTTGATGGGACATTCATCCTGCCAGCAACCTTGGCCATGGACCAGCCGGCTGGCCTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS GCA 72 bp | CTCTGGAGAGCGACTCAGAGAAATCCTCCAAATCGCTaGAGGAGCTGGCAGACGAGCAGCGGCTGCGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: LWRATQRNPPNR*RSWQTSSGCGN Trigger: GTTTCCGCAGCCGCTGCTCGTCTGCCAGCTCCTGCAGCGATTTGGAGGATTTCTCTGAGTCGCTCTCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS GCA 72 bp | CAGTCGGTTCATGTACTCCTGCAAGGCCTTCAGGCGTaGGTCTATTTCGGCCATGTCAGCCGCCTGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: QSVHVLLQGLQA*VYFGHVSRLVL Trigger: GAGCACCAGGCGGCTGACATGGCCGAAATAGACGCACGCCTGAAGGCCTTGCAGGAGTACATGAACCGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS GCA 72 bp | CCGCTTGCCCAGCCCCAGGGCAATGCACCTAAGCTCTaGAATTCTACCCGACTCCAGTGTCTCTGGCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PLAQPQGNAPKL*NSTRLQCLWLE Trigger: CTCAAGCCAGAGACACTGGAGTCGGGTAGAATTGCAGAGCTTAGGTGCATTGCCCTGGGGCTGGGCAAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596161.5 |
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| CDS CCA 72 bp | GCGACTCAGAGAAATCCTCCAAATCGCTGCAGGAGCTaGCAGACGAGCAGCGGCTGCGGAAACTGTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: ATQRNPPNRCRS*QTSSGCGNCPL Trigger: CAGTGGACAGTTTCCGCAGCCGCTGCTCGTCTGCCAGCTCCTGCAGCGATTTGGAGGATTTCTCTGAGTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS CCA 72 bp | TTCAGGCGTGCGTCTATTTCGGCCATGTCAGCCGCCTaGTGCTCCGAGCTGTACTCTTTGATGGGGACCCAG | + |
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Preference number: 6 (lower is better) Translates to: FRRASISAMSAA*CSELYSLMGTQ Trigger: CTGGGTCCCCATCAAAGAGTACAGCTCGGAGCACCAGGCGGCTGACATGGCCGAAATAGACGCACGCCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS TCA 72 bp | CAGCCGGCTGGTCCATGGCCAAGGTTGCTGGCAGGATaGATGTCCCATCAACTGGGTTTGGAGGTTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: QPAGPWPRLLAG*MSHQLGLEVER Trigger: CCTTTCAACCTCCAAACCCAGTTGATGGGACATTCATCCTGCCAGCAACCTTGGCCATGGACCAGCCGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS GCA 72 bp | CGTTATGACCGCATGTCCAGTCGGTTCATGTACTCCTaGAAGGCCTTCAGGCGTGCGTCTATTTCGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: RYDRMSSRFMYS*KAFRRASISAM Trigger: CATGGCCGAAATAGACGCACGCCTGAAGGCCTTGCAGGAGTACATGAACCGACTGGACATGCGGTCATAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000595358.5 |
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| CDS CCA 72 bp | GGGTCCACATCACCACATACAGAAGCAGCCGCTGTCTaGCCCTCAGCTTTTAGGATTCCGAATCTGGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: GSTSPHTEAAAV*PSAFRIPNLVL Trigger: TAGAACCAGATTCGGAATCCTAAAAGCTGAGGGCCAGACAGCGGCTGCTTCTGTATGTGGTGATGTGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601763.1 |
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| CDS TCA 72 bp | TGTCAGATGAACTTCCAAAGAGAGAAGAGTCGGCCATaGTATGAGTCTGGAGTTCAGGGCAGAGATCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: CQMNFQREKSRP*YESGVQGRDPG Trigger: GCCTGGATCTCTGCCCTGAACTCCAGACTCATATCATGGCCGACTCTTCTCTCTTTGGAAGTTCATCTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS CCA 72 bp | GGTTGCTGGCAGGATGAATGTCCCATCAACTGGGTTTaGAGGTTGAAAGGAAGAAATCGCAAGATTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: GCWQDECPINWV*RLKGRNRKIGL Trigger: CAAACCAATCTTGCGATTTCTTCCTTTCAACCTCCAAACCCAGTTGATGGGACATTCATCCTGCCAGCAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS CAA 90 bp | CAAGGTTGCTGGCAGGATGAATGTCCCATCAACTGGGTTTGGAGGTaGAAAGGAAGAAATCGCAAGATTGGTTTGGGACAAGTTTATGTC | + |
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Preference number: 6 (lower is better) Translates to: QGCWQDECPINWVWR*KGRNRKIGLGQVYV Trigger: GACATAAACTTGTCCCAAACCAATCTTGCGATTTCTTCCTTTCAACCTCCAAACCCAGTTGATGGGACATTCATCCTGCCAGCAACCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS TCA 72 bp | TCAGCTTTTAGGATTCCGAATCTGGTTCTAACGTTCTaGATCCCCTTTCCATGTCACGTCACCTTCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SAFRIPNLVLTF*IPFPCHVTFSL Trigger: GAGAGAGAAGGTGACGTGACATGGAAAGGGGATTCAGAACGTTAGAACCAGATTCGGAATCCTAAAAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601763.1 |
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| CDS TCA 72 bp | CAGAAGATGTTGAACTGTTTGAAGTTCCCTGTCTTGTaGGTCAAATCTTCAATGAAGCCAGCATCGAACTCG | + |
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Preference number: 6 (lower is better) Translates to: QKMLNCLKFPVL*VKSSMKPASNS Trigger: CGAGTTCGATGCTGGCTTCATTGAAGATTTGACTCACAAGACAGGGAACTTCAAACAGTTCAACATCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000536603.5 ENST00000594087.1 ENST00000594672.5 ENST00000595358.5 ENST00000599044.1 |
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| CDS TCA 72 bp | CAGAAGATGTTGAACTGTTTGAAGTTCCCTGTCTTGTaGGTCAAATCTTCAATGACTGGGTGGGGAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: QKMLNCLKFPVL*VKSSMTGWGEK Trigger: CTTTTCTCCCCACCCAGTCATTGAAGATTTGACTCACAAGACAGGGAACTTCAAACAGTTCAACATCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596161.5 |
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| CDS TCA 72 bp | GATTGGTTTGGGACAAGTTTATGTCTGAATGTCAGATaGACTTCCAAAGAGAGAAGAGTCGGCCATGATATG | + |
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Preference number: 6 (lower is better) Translates to: DWFGTSLCLNVR*TSKERRVGHDM Trigger: CATATCATGGCCGACTCTTCTCTCTTTGGAAGTTCATCTGACATTCAGACATAAACTTGTCCCAAACCAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594672.5 |
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| CDS CAA 72 bp | GTTCAAGATTTTATCAAAGACTCCAACTTCAACATTTaGTTTCCAAGACTCAGGCGCTCTGATCCTAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: VQDFIKDSNFNI*FPRLRRSDPKC Trigger: ACACTTAGGATCAGAGCGCCTGAGTCTTGGAAACAAAATGTTGAAGTTGGAGTCTTTGATAAAATCTTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601763.1 |
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