Pregenerated sensors for CCDC59 (Homo sapiens)
Ensembl gene IDs: ENSG00000133773Ensembl transcript IDs: ENST00000256151.8, ENST00000547758.1, ENST00000548126.1, ENST00000550589.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCATTCTTCTGCAATTTGCAAAGCATGAGAAGCAGTTATCCCAGTaGCTTATCTCAGCTCACAAGGGTACCAACAAGGGAGACAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: LILLQFAKHEKQLSQ*LISAHKGTNKGDRD Trigger: ATCTCTGTCTCCCTTGTTGGTACCCTTGTGAGCTGAGATAAGCCACTGGGATAACTGCTTCTCATGCTTTGCAAATTGCAGAAGAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| 3UTR-3UTR GCA 90 bp | GTTATCCCAGTGGCTTATCTCAGCTCACAAGGGTACCAACAAGGGAGACAGAGAGGAAAGCTTAATTCTTaGTGTGACACTGTGGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: VIPVAYLSSQGYQQGRQRGKLNS*CDTVGF Trigger: AAACCCCACAGTGTCACAGCAAGAATTAAGCTTTCC...TCTCTGTCTCCCTTGTTGGTACCCTTGTGAGCTGAGATAAGCCACTGGGATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTTATCCCAGTGGCTTATCTCAGCTCACAAGGGTACCAACAAGGGAGACAGACTTGCTGTGACACTGTaGGGTTTCCATCATTATTTA | + |
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Preference number: 2 (lower is better) Translates to: QLSQWLISAHKGTNKGDRLAVTL*GFHHYL Trigger: TAAATAATGATGGAAACCCCACAGTGTCACAGCAAG...TCTGTCTCCCTTGTTGGTACCCTTGTGAGCTGAGATAAGCCACTGGGATAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTTCTCATTCTTCTGCAATTTGCAAAGCATGAGAAGCAGTTATCCCAGTGGCGAGTTCACTGCTTTGTaGAGGTCGCTTTGTTATATG | + |
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Preference number: 2 (lower is better) Translates to: PFSFFCNLQSMRSSYPSGEFTAL*RSLCYM Trigger: CATATAACAAAGCGACCTTCACAAAGCAGTGAACTC...GCCACTGGGATAACTGCTTCTCATGCTTTGCAAATTGCAGAAGAATGAGAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| 3UTR CCA 72 bp | CTGCAATTTGCAAAGCATGAGAAGCAGTTATCCCAGTaGCTTATCTCAGCTCACAAGGGTACCAACAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LQFAKHEKQLSQ*LISAHKGTNKG Trigger: TCCCTTGTTGGTACCCTTGTGAGCTGAGATAAGCCACTGGGATAACTGCTTCTCATGCTTTGCAAATTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| 3UTR-3UTR CAA 90 bp | CCTTTCTCATTCTTCTGCAATTTGCAAAGCATGAGAAGCAGTTATCCCAGTGGCGTCCAAGAGGAGTCTTaGCCTCCCTCATCATTAAAA | + |
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Preference number: 3 (lower is better) Translates to: PFSFFCNLQSMRSSYPSGVQEES*PPSSLK Trigger: TTTTAATGATGAGGGAGGCAAAGACTCCTCTTGGAC...GCCACTGGGATAACTGCTTCTCATGCTTTGCAAATTGCAGAAGAATGAGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCTCATTCTTCTGCAATTTGCAAAGCATGAGAAGCAGTTATCCCAGTGGCTTTTTGTGAAGGTCGCTTaGTTATATGGTGAGGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: FLILLQFAKHEKQLSQWLFVKVA*LYGEGS Trigger: ACTGCCCTCACCATATAACAAAGCGACCTTCACAAA...AAGCCACTGGGATAACTGCTTCTCATGCTTTGCAAATTGCAGAAGAATGAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| 3UTR GCA 72 bp | AGTATAGGGTCCATAGGAACTGGAAAGCTTAATTCTTaGTGTGACACTGTGGGGTTTCCATCATTATTTAAA | + |
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Preference number: 3 (lower is better) Translates to: SIGSIGTGKLNS*CDTVGFPSLFK Trigger: TTTAAATAATGATGGAAACCCCACAGTGTCACAGCAAGAATTAAGCTTTCCAGTTCCTATGGACCCTATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS-3UTR TCA 90 bp | GTTATCCCAGTGGCTTATCTCAGCTCACAAGGGTACCAACAAGGGAGACAGAGAGAGTTCACTGCTTTGTaGAGGTCGCTTTGTTATATG | + |
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Preference number: 4 (lower is better) Translates to: VIPVAYLSSQGYQQGRQREFTAL*RSLCYM Trigger: CATATAACAAAGCGACCTTCACAAAGCAGTGAACTC...TCTCTGTCTCCCTTGTTGGTACCCTTGTGAGCTGAGATAAGCCACTGGGATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS-3UTR GCA 90 bp | CAGTTATCCCAGTGGCTTATCTCAGCTCACAAGGGTACCAACAAGGGAGACAGAGGAAAGCTTAATTCTTaGTGTGACACTGTGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: QLSQWLISAHKGTNKGDRGKLNS*CDTVGF Trigger: AAACCCCACAGTGTCACAGCAAGAATTAAGCTTTCC...TCTGTCTCCCTTGTTGGTACCCTTGTGAGCTGAGATAAGCCACTGGGATAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS-3UTR CCA 90 bp | GTTATCCCAGTGGCTTATCTCAGCTCACAAGGGTACCAACAAGGGAGACAGAGACTTGCTGTGACACTGTaGGGTTTCCATCATTATTTA | + |
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Preference number: 4 (lower is better) Translates to: VIPVAYLSSQGYQQGRQRLAVTL*GFHHYL Trigger: TAAATAATGATGGAAACCCCACAGTGTCACAGCAAG...TCTCTGTCTCCCTTGTTGGTACCCTTGTGAGCTGAGATAAGCCACTGGGATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS-3UTR CCA 90 bp | CAGTTATCCCAGTGGCTTATCTCAGCTCACAAGGGTACCAACAAGGGAGACAGATTTGGCAAGTATTATTaGTCAGCCCTTTTTGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: QLSQWLISAHKGTNKGDRFGKYY*SALFAY Trigger: GTAAGCAAAAAGGGCTGACCAATAATACTTGCCAAA...TCTGTCTCCCTTGTTGGTACCCTTGTGAGCTGAGATAAGCCACTGGGATAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS-3UTR TCA 90 bp | TTTCTCATTCTTCTGCAATTTGCAAAGCATGAGAAGCAGTTATCCCAGTGGCTTGCAATTTGCAAAGCATaGGAAGCAGTTATCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FLILLQFAKHEKQLSQWLAICKA*EAVIPV Trigger: CACTGGGATAACTGCTTCTCATGCTTTGCAAATTGC...AAGCCACTGGGATAACTGCTTCTCATGCTTTGCAAATTGCAGAAGAATGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS-3UTR GCA 90 bp | ATTCTTGCTGTGACACTGTGGGGTTTCCATCATTATTTAAAAGACCTTAGACTACCTTTCTCATTCTTCTaGAATTTGCAAAGCATGAGA | + |
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Preference number: 4 (lower is better) Translates to: ILAVTLWGFHHYLKDLRLPFSFF*NLQSMR Trigger: TCTCATGCTTTGCAAATTGCAGAAGAATGAGAAAGG...TAGTCTAAGGTCTTTTAAATAATGATGGAAACCCCACAGTGTCACAGCAAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS TCA 90 bp | GGGAGGAGCTGGTCGACTTGCCACCGGAGACAGTGCTGGCTGCGCTaGGGAAGTCAGCGTCGGAGACGGAGGCCCTGCCCTCAGAGACGC | + |
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Preference number: 5 (lower is better) Translates to: GRSWSTCHRRQCWLR*GSQRRRRRPCPQRR Trigger: GCGTCTCTGAGGGCAGGGCCTCCGTCTCCGACGCTGACTTCCTCAGCGCAGCCAGCACTGTCTCCGGTGGCAAGTCGACCAGCTCCTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547758.1 |
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| CDS GCA 90 bp | CGTGTGGGAGGAGCTGGTCGACTTGCCACCGGAGACAGTGCTGGCTaGGCTGAGGAAGTCAGCGTCGGAGACGGAGGCCCTGCCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RVGGAGRLATGDSAG*AEEVSVGDGGPALR Trigger: TCTGAGGGCAGGGCCTCCGTCTCCGACGCTGACTTCCTCAGCGCAGCCAGCACTGTCTCCGGTGGCAAGTCGACCAGCTCCTCCCACACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547758.1 |
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| CDS CCA 90 bp | TCGAAAAGCAAAGCCTTGTCCGTGGATTTCTACACAGAATCCGTGTaGGAGGAGCTGGTCGACTTGCCACCGGAGACAGTGCTGGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: SKSKALSVDFYTESV*EELVDLPPETVLAA Trigger: CGCAGCCAGCACTGTCTCCGGTGGCAAGTCGACCAGCTCCTCCCACACGGATTCTGTGTAGAAATCCACGGACAAGGCTTTGCTTTTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547758.1 ENST00000548126.1 |
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| CDS-3UTR CAA 90 bp | GTTATCCCAGTGGCTTATCTCAGCTCACAAGGGTACCAACAAGGGAGACAGAGATCGAAAAGCAAAGCCTaGTCCCTCGCGAACGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: VIPVAYLSSQGYQQGRQRSKSKA*SLANAP Trigger: GGGAGCGTTCGCGAGGGACAAGGCTTTGCTTTTCGA...TCTCTGTCTCCCTTGTTGGTACCCTTGTGAGCTGAGATAAGCCACTGGGATAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS CCA 90 bp | GACAGAAACTGGGTTTGGTACCATTTGCAGTTTCAGGGCATCCACTaGGGGTCTTGGAACATCTTCCAAACAGATAACGGGGGACCACAA | + |
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Preference number: 5 (lower is better) Translates to: DRNWVWYHLQFQGIH*GSWNIFQTDNGGPQ Trigger: TTGTGGTCCCCCGTTATCTGTTTGGAAGATGTTCCAAGACCCCCAGTGGATGCCCTGAAACTGCAAATGGTACCAAACCCAGTTTCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550589.1 |
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| CDS-3UTR CAA 90 bp | GTTATCCCAGTGGCTTATCTCAGCTCACAAGGGTACCAACAAGGGAGACAGAGATTTGTGAAGGTCGCTTaGTTATATGGTGAGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: VIPVAYLSSQGYQQGRQRFVKVA*LYGEGS Trigger: ACTGCCCTCACCATATAACAAAGCGACCTTCACAAA...TCTCTGTCTCCCTTGTTGGTACCCTTGTGAGCTGAGATAAGCCACTGGGATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS CCA 90 bp | TGGGTTTGGTACCATTTGCAGTTTCAGGGCATCCACTGGGGGTCTTaGAACATCTTCCAAACAGATAACGGGGGACCACAATATTTGATA | + |
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Preference number: 5 (lower is better) Translates to: WVWYHLQFQGIHWGS*NIFQTDNGGPQYLI Trigger: TATCAAATATTGTGGTCCCCCGTTATCTGTTTGGAAGATGTTCCAAGACCCCCAGTGGATGCCCTGAAACTGCAAATGGTACCAAACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000550589.1 |
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| CDS-3UTR CAA 90 bp | TTTCTCATTCTTCTGCAATTTGCAAAGCATGAGAAGCAGTTATCCCAGTGGCTTCTTTTTGTACTGCCTTaGGGCTTCTTCTCTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FLILLQFAKHEKQLSQWLLFVLP*GFFSLL Trigger: CAGGAGAGAGAAGAAGCCCAAAGGCAGTACAAAAAG...AAGCCACTGGGATAACTGCTTCTCATGCTTTGCAAATTGCAGAAGAATGAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS-3UTR CAA 90 bp | GTTCACTGCTTTGTGAAGGTCGCTTTGTTATATGGTGAGGGCAGTTTATTTCAGGTCCAAGAGGAGTCTTaGCCTCCCTCATCATTAAAA | + |
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Preference number: 5 (lower is better) Translates to: VHCFVKVALLYGEGSLFQVQEES*PPSSLK Trigger: TTTTAATGATGAGGGAGGCAAAGACTCCTCTTGGAC...CTGAAATAAACTGCCCTCACCATATAACAAAGCGACCTTCACAAAGCAGTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS-3UTR CAA 90 bp | GTTCACTGCTTTGTGAAGGTCGCTTTGTTATATGGTGAGGGCAGTTTATTTCAGGATGGTCGACTTTTCTaGCTTGCTTCCTATGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: VHCFVKVALLYGEGSLFQDGRLF*LASYVF Trigger: AAAGACATAGGAAGCAAGCAAGAAAAGTCGACCATC...CTGAAATAAACTGCCCTCACCATATAACAAAGCGACCTTCACAAAGCAGTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS-3UTR CAA 90 bp | CCTTTCTCATTCTTCTGCAATTTGCAAAGCATGAGAAGCAGTTATCCCAGTGGCTCATTCTTCTGCAATTaGCAAAGCATGAGAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: PFSFFCNLQSMRSSYPSGSFFCN*QSMRSS Trigger: ACTGCTTCTCATGCTTTGCAAATTGCAGAAGAATGA...GCCACTGGGATAACTGCTTCTCATGCTTTGCAAATTGCAGAAGAATGAGAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCATTCTTCTGCAATTTGCAAAGCATGAGAAGCAGTTATCCCAGTGGCTTATTTGGCAAGTATTATaGGTCAGCCCTTTTTGCTTA | + |
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Preference number: 5 (lower is better) Translates to: FLILLQFAKHEKQLSQWLIWQVL*VSPFCL Trigger: TAAGCAAAAAGGGCTGACCAATAATACTTGCCAAAT...AAGCCACTGGGATAACTGCTTCTCATGCTTTGCAAATTGCAGAAGAATGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000256151.8 |
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| CDS TCA 72 bp | TGGTCGACTTGCCACCGGAGACAGTGCTGGCTGCGCTaGGGAAGTCAGCGTCGGAGACGGAGGCCCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: WSTCHRRQCWLR*GSQRRRRRPCP Trigger: AGGGCAGGGCCTCCGTCTCCGACGCTGACTTCCTCAGCGCAGCCAGCACTGTCTCCGGTGGCAAGTCGACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547758.1 ENST00000548126.1 |
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| CDS GCA 72 bp | GGAGCTGGTCGACTTGCCACCGGAGACAGTGCTGGCTaGGCTGAGGAAGTCAGCGTCGGAGACGGAGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GAGRLATGDSAG*AEEVSVGDGGP Trigger: AGGGCCTCCGTCTCCGACGCTGACTTCCTCAGCGCAGCCAGCACTGTCTCCGGTGGCAAGTCGACCAGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547758.1 ENST00000548126.1 |
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| CDS CCA 72 bp | CCGTGGATTTCTACACAGAATCCGTGTGGGAGGAGCTaGTCGACTTGCCACCGGAGACAGTGCTGGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: PWISTQNPCGRS*STCHRRQCWLR Trigger: GCGCAGCCAGCACTGTCTCCGGTGGCAAGTCGACCAGCTCCTCCCACACGGATTCTGTGTAGAAATCCACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547758.1 ENST00000548126.1 |
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| CDS CAA 90 bp | TCCGTGGATTTCTACACAGAATCCGTGTGGGAGGAGCTGGTCGACTaGCCACCGGAGACAGTGCTGGCTGCGCTGAGGAAGTCAGCGTCG | + |
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Preference number: 6 (lower is better) Translates to: SVDFYTESVWEELVD*PPETVLAALRKSAS Trigger: CGACGCTGACTTCCTCAGCGCAGCCAGCACTGTCTCCGGTGGCAAGTCGACCAGCTCCTCCCACACGGATTCTGTGTAGAAATCCACGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547758.1 ENST00000548126.1 |
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| CDS CAA 72 bp | TTCTACACAGAATCCGTGTGGGAGGAGCTGGTCGACTaGCCACCGGAGACAGTGCTGGCTGCGCTGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: FYTESVWEELVD*PPETVLAALRK Trigger: CTTCCTCAGCGCAGCCAGCACTGTCTCCGGTGGCAAGTCGACCAGCTCCTCCCACACGGATTCTGTGTAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547758.1 ENST00000548126.1 |
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| CDS CCA 72 bp | AAAGCCTTGTCCGTGGATTTCTACACAGAATCCGTGTaGGAGGAGCTGGTCGACTTGCCACCGGAGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: KALSVDFYTESV*EELVDLPPETV Trigger: CACTGTCTCCGGTGGCAAGTCGACCAGCTCCTCCCACACGGATTCTGTGTAGAAATCCACGGACAAGGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547758.1 ENST00000548126.1 |
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| CDS CCA 72 bp | TACCATTTGCAGTTTCAGGGCATCCACTGGGGGTCTTaGAACATCTTCCAAACAGATAACGGGGGACCACAA | + |
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Preference number: 6 (lower is better) Translates to: YHLQFQGIHWGS*NIFQTDNGGPQ Trigger: TTGTGGTCCCCCGTTATCTGTTTGGAAGATGTTCCAAGACCCCCAGTGGATGCCCTGAAACTGCAAATGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000550589.1 |
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| CDS CCA 72 bp | TGGGTTTGGTACCATTTGCAGTTTCAGGGCATCCACTaGGGGTCTTGGAACATCTTCCAAACAGATAACGGG | + |
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Preference number: 6 (lower is better) Translates to: WVWYHLQFQGIH*GSWNIFQTDNG Trigger: CCCGTTATCTGTTTGGAAGATGTTCCAAGACCCCCAGTGGATGCCCTGAAACTGCAAATGGTACCAAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550589.1 |
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| CDS CAA 90 bp | GCATTAAATTCCCAAGTAAAAGACATTAACAGAAATACATTCCAATaGACAGAAACTGGGTTTGGTACCATTTGCAGTTTCAGGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: ALNSQVKDINRNTFQ*TETGFGTICSFRAS Trigger: GGATGCCCTGAAACTGCAAATGGTACCAAACCCAGTTTCTGTCAATTGGAATGTATTTCTGTTAATGTCTTTTACTTGGGAATTTAATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550589.1 |
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| CDS CAA 90 bp | TCCTCTCTATTCCATTTTACCTACCTAGTCATGAATCACCATACCTaGGATCTAGATACCATTTTGAACTGTTCTATCTTTAACTACTTC | + |
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Preference number: 6 (lower is better) Translates to: SSLFHFTYLVMNHHT*DLDTILNCSIFNYF Trigger: GAAGTAGTTAAAGATAGAACAGTTCAAAATGGTATCTAGATCCAAGGTATGGTGATTCATGACTAGGTAGGTAAAATGGAATAGAGAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550589.1 |
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| CDS TCA 72 bp | CATACTTCAAACTGCAAAAGTTATGGCCACAGTACGTaGTTTAAGATGGAAAAGGCATTAAATTCCCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: HTSNCKSYGHST*FKMEKALNSQV Trigger: TACTTGGGAATTTAATGCCTTTTCCATCTTAAATCACGTACTGTGGCCATAACTTTTGCAGTTTGAAGTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550589.1 |
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