RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC57 (Homo sapiens)

Ensembl gene IDs: ENSG00000176155

Ensembl transcript IDs: ENST00000327026.7, ENST00000389641.9, ENST00000392343.3, ENST00000392345.6, ENST00000392346.6, ENST00000392347.5, ENST00000419322.6, ENST00000475635.1, ENST00000483145.1, ENST00000577530.1, ENST00000578187.1, ENST00000578910.1, ENST00000581625.2, ENST00000582100.1, ENST00000582885.1, ENST00000583593.2, ENST00000584717.1, ENST00000665763.1

Found 1035 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCGGCTCATGGCCTCCAGGTCCTGGAGCTCCCCGGCTCGGCTCTaGAGCTTCCTCTCCAGCTCGGCGTTGGTGGCCTCTGCCCTCTGC +
Preference number: 1 (lower is better)
Translates to: ARLMASRSWSSPARL*SFLSSSALVASALC
Trigger: GCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGAGGCCATGAGCCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR TCA 90 bp GGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCTaGGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGC +
Preference number: 1 (lower is better)
Translates to: GPTSRHGLHCSPRPT*APRAYRQQRWQSTG
Trigger: GCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
3UTR GCA 90 bp TCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCCTCCCTGTaGCGGCAGCCCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCC +
Preference number: 1 (lower is better)
Translates to: SVRVLSFAQALLPSL*RQPRNGLQAEGQGP
Trigger: GGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGGGCTGCCGGCACAGGGAGGGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 90 bp TCCTCTAAATCCTTTACCCGGGCGCGGCTCATGGCCTCCAGGTCCTaGAGCTCCCCGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCG +
Preference number: 1 (lower is better)
Translates to: SSKSFTRARLMASRS*SSPARLWSFLSSSA
Trigger: CGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR GCA 90 bp GGCCTTTGCCTGGGCTGCTGTCTTCATCCCTGGGGTGGCAATGCCTaGCTGCATCTTGACGGGCCTCCTGTCGGCTGCTGGAGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: GLCLGCCLHPWGGNA*LHLDGPPVGCWRSW
Trigger: CCAGCTCCTCCAGCAGCCGACAGGAGGCCCGTCAAGATGCAGGCAGGCATTGCCACCCCAGGGATGAAGACAGCAGCCCAGGCAAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583593.2
3UTR CCA 90 bp AGGACCAGGAGAAGAGGAGGCGTGTGGAGGAAGAAGGCGGAGGAATaGGGAGAGGGGGTGGAGCAGGGCCCACTTCCAGGCACGGCCTTC +
Preference number: 1 (lower is better)
Translates to: RTRRRGGVWRKKAEE*GEGVEQGPLPGTAF
Trigger: GAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCACCCCCTCTCCCCATTCCTCCGCCTTCTTCCTCCACACGCCTCCTCTTCTCCTGGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392343.3
3UTR GCA 90 bp CCCCAGACCCTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTaGTCAGGCCCTGCTTCCCTCCCTGTGCCGGCAGCCCAGAAACGG +
Preference number: 1 (lower is better)
Translates to: PQTLVQSQLRKGAQL*SGPASLPVPAAQKR
Trigger: CCGTTTCTGGGCTGCCGGCACAGGGAGGGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAGGGTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR GCA 90 bp TTTGCCTGGGCTGCTGTCTTCATCCCTGGGGTGGCAATGCCTGCCTaGATCTTGACGGGCCTCCTGTCGGCTGCTGGAGGAGCTGGGAGC +
Preference number: 1 (lower is better)
Translates to: FAWAAVFIPGVAMPA*ILTGLLSAAGGAGS
Trigger: GCTCCCAGCTCCTCCAGCAGCCGACAGGAGGCCCGTCAAGATGCAGGCAGGCATTGCCACCCCAGGGATGAAGACAGCAGCCCAGGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583593.2
3UTR CCA 90 bp CCAGGGCCCCAGGGTTCACCTTGCCTGTCTCCCTTCCAACAAGGGTaGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCT +
Preference number: 1 (lower is better)
Translates to: PGPQGSPCLSPFQQG*RSCPGSRTRPGSRS
Trigger: AGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTTGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR GCA 90 bp CCTCTCCAGCTCGGCGTTGGTGGCCTCTGCCCTCTGCAGACTCTCTaGAGCCTTTGCCCCGGCTTCCTTCAGAGCCTCCAGCTCTTTGTG +
Preference number: 1 (lower is better)
Translates to: PLQLGVGGLCPLQTL*SLCPGFLQSLQLFV
Trigger: CACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR GCA 90 bp CAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGGGTTCACCTTaGCTGTCTCCCTTCCAACAAGGGTGGCGGTCTTGTCCGGGATCT +
Preference number: 1 (lower is better)
Translates to: QKRPSGRRPGPQGSP*LSPFQQGWRSCPGS
Trigger: AGATCCCGGACAAGACCGCCACCCTTGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR TCA 90 bp AGCATCAGCCCTGTTCCCACGGTGTGGCTCCTCCTGAGTCTCCACTaGATGTCCACAGTGATCACTGGGGACCCATCCCCCTGGCTGGAG +
Preference number: 1 (lower is better)
Translates to: SISPVPTVWLLLSLH*MSTVITGDPSPWLE
Trigger: CTCCAGCCAGGGGGATGGGTCCCCAGTGATCACTGTGGACATTCAGTGGAGACTCAGGAGGAGCCACACCGTGGGAACAGGGCTGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 90 bp CGTGCCATTCAGGGCACCCCAGTGCTCCCTTCTTGGCCAGAGCACTaGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCTGTGGGGC +
Preference number: 1 (lower is better)
Translates to: RAIQGTPVLPSWPEH*FLDSCSFSDKVLWG
Trigger: GCCCCACAGCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGGGGTGCCCTGAATGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 90 bp GCTGGGGTTGTCCGTGCCATTCAGGGCACCCCAGTGCTCCCTTCTTaGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAG +
Preference number: 1 (lower is better)
Translates to: AGVVRAIQGTPVLPS*PEHWFLDSCSFSDK
Trigger: CTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGGGGTGCCCTGAATGGCACGGACAACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 90 bp GGTGTGGCTCCTCCTGAGTCTCCACTGAATGTCCACAGTGATCACTaGGGACCCATCCCCCTGGCTGGAGCTTCAGTATGTCATGACCGT +
Preference number: 1 (lower is better)
Translates to: GVAPPESPLNVHSDH*GPIPLAGASVCHDR
Trigger: ACGGTCATGACATACTGAAGCTCCAGCCAGGGGGATGGGTCCCCAGTGATCACTGTGGACATTCAGTGGAGACTCAGGAGGAGCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 90 bp TTCAGGGCACCCCAGTGCTCCCTTCTTGGCCAGAGCACTGGTTCTTaGATTCCTGTAGCTTCAGTGACAAGGTGCTGTGGGGCTGTGCAT +
Preference number: 1 (lower is better)
Translates to: FRAPQCSLLGQSTGS*IPVASVTRCCGAVH
Trigger: ATGCACAGCCCCACAGCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGGGGTGCCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 90 bp GGAGCTCTCTATGACCAGAGAGTGAAGCGTTTCACTGAAGAACTGTaGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGG +
Preference number: 1 (lower is better)
Translates to: GALYDQRVKRFTEEL*PASPGKEGASLSPG
Trigger: CCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCACTCTCTGGTCATAGAGAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
3UTR GCA 90 bp GGGGACCCATCCCCCTGGCTGGAGCTTCAGTATGTCATGACCGTGTaGGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCT +
Preference number: 1 (lower is better)
Translates to: GDPSPWLELQYVMTV*EVWKLFTLHAPFSS
Trigger: AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAGGGGGATGGGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR GCA 90 bp CAGATTTCTGGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTaGCCTGAAATGCCGGCTCCTTCTGTGTCCCCAGACCCTAGTGCA +
Preference number: 1 (lower is better)
Translates to: QISGALFCSFLLAGF*PEMPAPSVSPDPSA
Trigger: TGCACTAGGGTCTGGGGACACAGAAGGAGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCCAGAAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 90 bp TCCCCCTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTaGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCTTTGCCTGGC +
Preference number: 1 (lower is better)
Translates to: SPWLELQYVMTVCEV*KLFTLHAPFSSLPG
Trigger: GCCAGGCAAAGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR GCA 90 bp GTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATaGTCCTTTCTCCTCTTTGCCTGGCTTTGTGGAGTTTTCTTCTAT +
Preference number: 1 (lower is better)
Translates to: VCHDRVRGLEVVHLT*SFLLFAWLCGVFFY
Trigger: ATAGAAGAAAACTCCACAAAGCCAGGCAAAGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CCA 90 bp TGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCAGGGGCGGCCGGGTGTGTCTGTaGGGAGTGGGCGCGTGCTCA +
Preference number: 2 (lower is better)
Translates to: CGRRLQERKEPRFLQGRGGRVCL*GVGACS
Trigger: TGAGCACGCGCCCACTCCCCACAGACACACCCGGCC...GCCCCTGCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583593.2
3UTR-3UTR GCA 90 bp AGCTCCCCGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCGTTGGTGGCCTCTACTCTCTGCAGCCTTTaGCCCGGCTTCCTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: SSPARLWSFLSSSALVASTLCSL*PGFLQS
Trigger: GCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGT...AGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR-3UTR CCA 90 bp CTCCCTGTGCCGGCAGCCCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGCCAGTGCTCCCTTCTTaGCCAGAGCACTGGTTCTTG +
Preference number: 2 (lower is better)
Translates to: LPVPAAQKRPSGRRPGPQPVLPS*PEHWFL
Trigger: CAAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGG...CTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGGGCTGCCGGCACAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CAA 90 bp CCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGGGTTCACCTaGCCTGTCTCCCTTCCAACAAGGGTGGCGGTCTTGTCCGGGATC +
Preference number: 2 (lower is better)
Translates to: PETAFRQKARAPGFT*PVSLPTRVAVLSGI
Trigger: GATCCCGGACAAGACCGCCACCCTTGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATCCCTGCCTCCACCCTaGACGCTGTGCCCACACCCC +
Preference number: 2 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSLPPP*TLCPHP
Trigger: GGGGTGTGGGCACAGCGTGCAGGGTGGAGGCAGGGA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
3UTR-3UTR GCA 90 bp CCTGGAGCTCCCCGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCGTTGGTGGCTCATGTTGTCAGCCTaGAGACGGAATTCGTGCTCC +
Preference number: 2 (lower is better)
Translates to: PGAPRLGSGASSPARRWWLMLSA*RRNSCS
Trigger: GGAGCACGAATTCCGTCTGCAGGCTGACAACATGAG...CCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR CAA 90 bp CCAGGGTTCACCTTGCCTGTCTCCCTTCCAACAAGGGTGGCGGTCTaGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: PGFTLPVSLPTRVAV*SGISDSSRVSVLLG
Trigger: CCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTTGTTGGAAGGGAGACAGGCAAGGTGAACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAAAGCACAGGCACCATaGGGAGGCCCCGAGCACCCC +
Preference number: 2 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGKAQAP*GGPEHP
Trigger: GGGGTGCTCGGGGCCTCCGCATGGTGCCTGTGCTTT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
3UTR-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATTTGGGAGCCTGCCCTaGAGCTCCCTGCCTCCACCC +
Preference number: 2 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSFGSLP*SSLPPP
Trigger: GGGTGGAGGCAGGGAGCTGCAGGGCAGGCTCCCAAA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
3UTR-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCAGCATTTGGGAGCCTaGCCTGCAGCTCCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPQHLGA*PAAPCL
Trigger: GAGGCAGGGAGCTGCAGGGCAGGCTCCCAAATGCTG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
3UTR-3UTR GCA 90 bp CCCGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCGTTGGTGGCCTCTGCCCTTGCAGACGGAATTCGTaGTCCCTCTTCCGCATTTTC +
Preference number: 2 (lower is better)
Translates to: PGSALELPLQLGVGGLCPCRRNS*SLFRIF
Trigger: GAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCA...AGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR-3UTR CCA 90 bp CTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGCAAGGACGGTTTCTGTaGCAGGAACCTCGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: LVPPELPGHTDSNAGRAQQGRFL*QEPRRV
Trigger: CACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTG...CTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
3UTR-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACAGCATTTGGGAGCCTaGCCTGCAGCTCCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSQHLGA*PAAPCL
Trigger: GAGGCAGGGAGCTGCAGGGCAGGCTCCCAAATGCTG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
3UTR-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCGCCTCAGCAGCATTTaGGAGCCTGCCCTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGRLSSI*EPALQL
Trigger: GAGCTGCAGGGCAGGCTCCCAAATGCTGCTGAGGCG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
3UTR-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCCCACAACACGTAGGTaGAAGCACAGGCACCATGCG +
Preference number: 2 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPPTTRR*KHRHHA
Trigger: CGCATGGTGCCTGTGCTTTCACCTACGTGTTGTGGG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
3UTR-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCCCACAACACGTAGGTaGAAGCACAGGCACCATGCG +
Preference number: 2 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGPTTRR*KHRHHA
Trigger: CGCATGGTGCCTGTGCTTTCACCTACGTGTTGTGGG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
3UTR-3UTR CCA 90 bp CTCCCTGTGCCGGCAGCCCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGCCTAAGTGGCAGTCATaGTTTCGTCACTACAATTTC +
Preference number: 2 (lower is better)
Translates to: LPVPAAQKRPSGRRPGPQPKWQS*FRHYNF
Trigger: GAAATTGTAGTGACGAAACCATGACTGCCACTTAGG...CTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGGGCTGCCGGCACAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR GCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCCCCCAGGGTTCACCTTaGCTGTCTCCCTTCCAACAA +
Preference number: 2 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASPQGSP*LSPFQQ
Trigger: TTGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGG...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CAA 90 bp ATTCAGGGCACCCCAGTGCTCCCTTCTTGGCCAGAGCACTGGTTCTaGGATTCCTGTAGCTTCAGTGACAAGGTGCTGTGGGGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: IQGTPVLPSWPEHWF*DSCSFSDKVLWGCA
Trigger: TGCACAGCCCCACAGCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGGGGTGCCCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR GCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCAGAAGCAGAAGTGAGTaGCAGCCGTTGTGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASRSRSE*QPLCGH
Trigger: ATGCCCACACAACGGCTGGCACTCACTTCTGCTTCT...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CCA 90 bp CTCCCTGTGCCGGCAGCCCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGTTTTCTAGTTGTTCATaGAGGAACATTAAAGTCTGG +
Preference number: 2 (lower is better)
Translates to: LPVPAAQKRPSGRRPGPQFSSCS*RNIKVW
Trigger: CCAGACTTTAATGTTCCTCCATGAACAACTAGAAAA...CTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGGGCTGCCGGCACAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCCAGAGCACTGGTTCTTaGATTCCTGTAGCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASQSTGS*IPVASV
Trigger: CACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTG...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CAA 90 bp AGTAGTTTAACCTTAAGCTCCCGGGACAAGGCTGTGTTGCTCATGTaGTCAGCCTGCAGACGGAATTCGTGCTCCCTCTTCCGCATTTTC +
Preference number: 2 (lower is better)
Translates to: SSLTLSSRDKAVLLM*SACRRNSCSLFRIF
Trigger: GAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR CAA 90 bp TCTTTGTGCAGTAGTTTAACCTTAAGCTCCCGGGACAAGGCTGTGTaGCTCATGTTGTCAGCCTGCAGACGGAATTCGTGCTCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: SLCSSLTLSSRDKAV*LMLSACRRNSCSLF
Trigger: GAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACTGCACAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR-3UTR CCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTCCCTTCCAACAAGGGTaGCGGTCTTGTCCGGGATCT +
Preference number: 2 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIPFQQG*RSCPGS
Trigger: AGATCCCGGACAAGACCGCCACCCTTGTTGGAAGGG...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR GCA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTGCTTCAGTGACAAGGTaGTGTGGGGCTGTGCATCCA +
Preference number: 2 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFASVTR*CGAVHP
Trigger: TGGATGCACAGCCCCACAGCACCTTGTCACTGAAGC...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR GCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTAGAAGCAGAAGTGAGTaGCAGCCGTTGTGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIRSRSE*QPLCGH
Trigger: ATGCCCACACAACGGCTGGCACTCACTTCTGCTTCT...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR GCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGGGCTGGGGTTGTCCGTaGCATTCAGGGCACCCCAGT +
Preference number: 2 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLGWGCP*HSGHPS
Trigger: ACTGGGGTGCCCTGAATGGCACGGACAACCCCAGCC...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR GCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGGCTGGGGTTGTCCGTaGCATTCAGGGCACCCCAGT +
Preference number: 2 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKGWGCP*HSGHPS
Trigger: ACTGGGGTGCCCTGAATGGCACGGACAACCCCAGCC...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CCA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTCAGAGCACTGGTTCTTaGATTCCTGTAGCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFQSTGS*IPVASV
Trigger: CACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTG...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATAGTTACTTTCCTAAGTaGCAGTCATGGTTTCGTCAC +
Preference number: 2 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHSYFPK*QSWFRH
Trigger: GTGACGAAACCATGACTGCCACTTAGGAAAGTAACT...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATTTTCTCCTCTTTGCCTaGCTTTGTGGAGTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHFLLFA*LCGVFF
Trigger: GAAGAAAACTCCACAAAGCCAGGCAAAGAGGAGAAA...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR GCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGCTTCAGTGACAAGGTaGTGTGGGGCTGTGCATCCA +
Preference number: 2 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKASVTR*CGAVHP
Trigger: TGGATGCACAGCCCCACAGCACCTTGTCACTGAAGC...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATCTTTGCCTGGCTTTGTaGAGTTTTCTTCTATACATG +
Preference number: 2 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHLCLAL*SFLLYM
Trigger: CATGTATAGAAGAAAACTCCACAAAGCCAGGCAAAG...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CCA 90 bp TGTGGAGTTTTCTTCTATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGCCTAAGTGGCAGTCATaGTTTCGTCACTACAATTTC +
Preference number: 2 (lower is better)
Translates to: CGVFFYTCTGWSSVQTQEPKWQS*FRHYNF
Trigger: GAAATTGTAGTGACGAAACCATGACTGCCACTTAGG...CTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATAGAAGAAAACTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CCA 90 bp AGAAGCAGAAGTGAGTGCCAGCCGTTGTGTGGGCATAGAATAAATATTATCAGAAGTTACTTTCCTAAGTaGCAGTCATGGTTTCGTCAC +
Preference number: 2 (lower is better)
Translates to: RSRSECQPLCGHRINIIRSYFPK*QSWFRH
Trigger: GTGACGAAACCATGACTGCCACTTAGGAAAGTAACT...TCTGATAATATTTATTCTATGCCCACACAACGGCTGGCACTCACTTCTGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CAA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTaGACCATCTGTTTCTCAGAAAGTTCCAAGACTGCCCTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: GFVTTISRKELTDIY*TICFSESSKTALSF
Trigger: AAAGGACAGGGCAGTCTTGGAACTTTCTGAGAAACAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 72 bp TCCTTTACCCGGGCGCGGCTCATGGCCTCCAGGTCCTaGAGCTCCCCGGCTCGGCTCTGGAGCTTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: SFTRARLMASRS*SSPARLWSFLS
Trigger: GGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR-3UTR CAA 90 bp CTGGAGCTCCCCGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCGTTGGTGGCGACTCTCTGCAGCCTTaGCCCCGGCTTCCTTCAGAG +
Preference number: 3 (lower is better)
Translates to: LELPGSALELPLQLGVGGDSLQP*PRLPSE
Trigger: CTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTC...GCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR TCA 72 bp TCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCTaGGCTCCCAGGGCATACAGACAGCAACGCTGGCAG +
Preference number: 3 (lower is better)
Translates to: SRHGLHCSPRPT*APRAYRQQRWQ
Trigger: CTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
3UTR GCA 72 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTaGTCAGGCCCTGCTTCCCTCCCTGTGCCGGCAGCC +
Preference number: 3 (lower is better)
Translates to: LVQSQLRKGAQL*SGPASLPVPAA
Trigger: GGCTGCCGGCACAGGGAGGGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CAA 90 bp CCCGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCGTTGGTGGCCTCTGCCCTGCTGTGTTGCTCATGTaGTCAGCCTGCAGACGGAAT +
Preference number: 3 (lower is better)
Translates to: PGSALELPLQLGVGGLCPAVLLM*SACRRN
Trigger: ATTCCGTCTGCAGGCTGACAACATGAGCAACACAGC...AGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR GCA 72 bp CCTTCAGGCAGAAGGCCAGGGCCCCAGGGTTCACCTTaGCTGTCTCCCTTCCAACAAGGGTGGCGGTCTTGT +
Preference number: 3 (lower is better)
Translates to: PSGRRPGPQGSP*LSPFQQGWRSC
Trigger: ACAAGACCGCCACCCTTGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGGCCCTGGCCTTCTGCCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 72 bp CAGGGTTCACCTTGCCTGTCTCCCTTCCAACAAGGGTaGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: QGSPCLSPFQQG*RSCPGSRTRPG
Trigger: CCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTTGTTGGAAGGGAGACAGGCAAGGTGAACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR GCA 72 bp GGGCTGGGGTTGTCCGTGCCATTCAGGGCACCCCAGTaGTCCCTTCTTGGCCAGAGCACTGGTTCTTGGATT +
Preference number: 3 (lower is better)
Translates to: GLGLSVPFRAPQ*SLLGQSTGSWI
Trigger: AATCCAAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGGGGTGCCCTGAATGGCACGGACAACCCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 72 bp GTCCGTGCCATTCAGGGCACCCCAGTGCTCCCTTCTTaGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTC +
Preference number: 3 (lower is better)
Translates to: VRAIQGTPVLPS*PEHWFLDSCSF
Trigger: GAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGGGGTGCCCTGAATGGCACGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CAA 90 bp CTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACGCCCCAGGGTTCACCTaGCCTGTCTCCCTTCCAACA +
Preference number: 3 (lower is better)
Translates to: LAGASVCHDRVRGLEVVHAPGFT*PVSLPT
Trigger: TGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGGC...GTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR TCA 72 bp TGCTGGAGGAGCTGGGAGCTCTCTATGACCAGAGAGTaGAGCGTTTCACTGAAGAACTGTGGCCGGCGTCTC +
Preference number: 3 (lower is better)
Translates to: CWRSWELSMTRE*SVSLKNCGRRL
Trigger: GAGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCACTCTCTGGTCATAGAGAGCTCCCAGCTCCTCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
3UTR CCA 72 bp CCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTaGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATG +
Preference number: 3 (lower is better)
Translates to: PGSRTRPGSRSC*GSRSCLTSCPM
Trigger: CATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 72 bp CCTCCTGAGTCTCCACTGAATGTCCACAGTGATCACTaGGGACCCATCCCCCTGGCTGGAGCTTCAGTATGT +
Preference number: 3 (lower is better)
Translates to: PPESPLNVHSDH*GPIPLAGASVC
Trigger: ACATACTGAAGCTCCAGCCAGGGGGATGGGTCCCCAGTGATCACTGTGGACATTCAGTGGAGACTCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR GCA 72 bp TCCCGGGACAAGGCTGTGTTGCTCATGTTGTCAGCCTaGAGACGGAATTCGTGCTCCCTCTTCCGCATTTTC +
Preference number: 3 (lower is better)
Translates to: SRDKAVLLMLSA*RRNSCSLFRIF
Trigger: GAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR-3UTR CAA 90 bp CGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGGGATCTCGGTCTTGTTAGTGAGTGCCAGCCGTaGTGTGGGCATAGAATAAAT +
Preference number: 3 (lower is better)
Translates to: RDLGLVQGLGLVGDLGLVSECQP*CGHRIN
Trigger: ATTTATTCTATGCCCACACAACGGCTGGCACTCACT...AACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR GCA 72 bp TCCCCCTGGCTGGAGCTTCAGTATGTCATGACCGTGTaGGAGGTCTGGAAGTTGTTCACCTTACATGCTCCT +
Preference number: 3 (lower is better)
Translates to: SPWLELQYVMTV*EVWKLFTLHAP
Trigger: AGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 72 bp TATGACCAGAGAGTGAAGCGTTTCACTGAAGAACTGTaGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTT +
Preference number: 3 (lower is better)
Translates to: YDQRVKRFTEEL*PASPGKEGASL
Trigger: AAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCACTCTCTGGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
3UTR-3UTR CAA 90 bp TTATCCTCTAAATCCTTTACCCGGGCGCGGCTCATGGCCTCCAGGTCCTGGAGCAGAGCCTCCAGCTCTTaGTGCAGTAGTTTAACCTTA +
Preference number: 3 (lower is better)
Translates to: LSSKSFTRARLMASRSWSRASSS*CSSLTL
Trigger: TAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCT...GCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
3UTR-3UTR CAA 90 bp CGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGGGATCTCGGTCTTGTTCTAACAGACATCTACTaGACCATCTGTTTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: RDLGLVQGLGLVGDLGLVLTDIY*TICFSE
Trigger: TTCTGAGAAACAGATGGTCAAGTAGATGTCTGTTAG...AACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CCA 72 bp CTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTaGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: LELQYVMTVCEV*KLFTLHAPFSS
Trigger: AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CAA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTCTGCAGTTTCCTCCTaGCGGGATTCTGCCCTGAAA +
Preference number: 3 (lower is better)
Translates to: YTCTGWSSVQTQENPVQISAVSS*RDSALK
Trigger: TTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGA...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CAA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCCCCAGTGCTCCCTTCTaGGCCAGAGCACTGGTTCTT +
Preference number: 3 (lower is better)
Translates to: SGSHGFVTTISRKELTDIPSAPF*ARALVL
Trigger: AAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGGG...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CAA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCCCCAGTGCTCCCTTCTaGGCCAGAGCACTGGTTCTT +
Preference number: 3 (lower is better)
Translates to: GFVTTISRKELTDIYLTIPSAPF*ARALVL
Trigger: AAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGGG...GATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR-3UTR CAA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTCTAACAGACATCTACTaGACCATCTGTTTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFLTDIY*TICFSE
Trigger: TTCTGAGAAACAGATGGTCAAGTAGATGTCTGTTAG...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTCCCTGTGCCGGCAGCCCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGCGGGGAAGCTCACGCTaGAGAGCGGCCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPVPAAQKRPSGRRPGPQRGSSR*RAAGSR
Trigger: CCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCG...CTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGGGCTGCCGGCACAGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR TCA 90 bp CTCCCTGTGCCGGCAGCCCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGGGCGGCAGGACTGCTTaGGCCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: LPVPAAQKRPSGRRPGPQGGRTA*AQEFET
Trigger: GGTCTCGAACTCCTGGGCTCAAGCAGTCCTGCCGCC...CTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGGGCTGCCGGCACAGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGGGCTGCTTCCTGCCTaGAGGCTCCGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: ATLAEHRQGRFLWQEPRRGLLPA*RLRSPV
Trigger: CACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCC...CCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCGTTGGTGGCCTCTGCCCTCACCGCCACCAGCACTaGATCCTTCTCCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGSALELPLQLGVGGLCPHRHQH*ILLPGQ
Trigger: CTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTG...AGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CCA 90 bp GCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGCGGGGAAGCTCACGCTaGAGAGCGGCCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ATLAEHRQGRFLWQEPRRRGSSR*RAAGSR
Trigger: CCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCG...CCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp TGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCTGTCCCCGGCTCGGCTCTaGAGCTTCCTCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: WSRAHFQARPSLQPSSHLSPARL*SFLSSS
Trigger: CGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGA...CAGGTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCGTTGGTGGCCTCTGCCCTCTTCCCCGGCTCGGCTCTaGAGCTTCCTCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RLGSGASSPARRWWPLPSSPARL*SFLSSS
Trigger: CGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGA...AGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACCCCGGGCGCGGCTCATaGCCTCCAGGTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHPGRGS*PPGPGA
Trigger: AGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGG...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAAGGCCCAGCTGCACCTaGTCACGCTCCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRRPSCT*SRSRLR
Trigger: GCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCT...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGACTGGGGGCTGCTTCCTaGCTGAAGGCTCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: EHRQGRFLWQEPRRVAGGLGAAS*LKAPLP
Trigger: GGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAG...TCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCTCCGAGGCTGGGGGCTaGTTCCTGCCTGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGRAQARTVSVAGTSAGGSEAGG*FLPEGS
Trigger: GGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGA...GCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGTGGGTGCGGTGTGCCTaGAGCGCCCTCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: QPSSHLSSQGIQTATLAEWVRCA*SALHSS
Trigger: GGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCA...CTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGCAGCTGGGTGCGGTGTaGCTGCAGCGCCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: ATLAEHRQGRFLWQEPRRQLGAV*LQRPPL
Trigger: GAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTG...CCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp TCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGCCTCCTGCAGCTGGGTaGGGTGTGCCTGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SLQPSSHLSSQGIQTATLPPAAG*GVPAAP
Trigger: GGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGG...CAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCATGCAGAGCCGCCTCCTaGAGCTGGGTGCGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: ALVPPELPGHTDSNAGRACRAAS*SWVRCA
Trigger: GGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCA...TGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGTCTCCACTCTGCCCTaGGGAGCTGCGCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRVSTLP*GAAPRG
Trigger: CCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGAC...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GGGTGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACTCGAGGTGCGGACGCTaGGCTGAGACTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: GWSRAHFQARPSLQPSSHSRCGR*AETQHE
Trigger: CTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGA...GTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CTCCCTGTGCCGGCAGCCCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGGAGGAGCTGTGGGATTaGCGACCATGCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPVPAAQKRPSGRRPGPQEELWD*RPCSSG
Trigger: CCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTC...CTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGGGCTGCCGGCACAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGCCCGCCAGCGTGGCTTaGCCCTCCTCCACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWPASVA*PSSTPW
Trigger: CCAAGGAGTGGAGGAGGGCCAAGCCACGCTGGCGGG...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR CCA 90 bp CCTTCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGGCCGCCTCCTGCAGCTaGGTGCGGTGTGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLQPSSHLSSQGIQTATAASCS*VRCACS
Trigger: GCTGCAGGCACACCGCACCCAGCTGCAGGAGGCGGC...CGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGACCTCTTCCCACTCCCTaGCCTGGGCGAAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: EHRQGRFLWQEPRRVAGGPLPTP*PGRRRR
Trigger: ACGCCGCCTTCGCCCAGGCCAGGGAGTGGGAAGAGG...TCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCCTCCTGCAGCTGGGTaGGGTGTGCCTGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPPPAAG*GVPAAP
Trigger: GGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGAGCCTGTCTCCACTCTaGCCTGCGGAGCTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: QPSSHLSSQGIQTATLAESLSPL*PAELRL
Trigger: GAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCT...CTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGATCATCACAGCGGCGCTaGCAGTCCAGGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EHRQGRFLWQEPRRVAGGSSQRR*QSRPSC
Trigger: GCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGA...TCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGGCCTGCACGGCCTaGTCTCGTTCCAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHRACTA*SRSRVT
Trigger: CGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCT...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCGGGGAAGCTCACGCTaGAGAGCGGCCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRGSSR*RAAGSR
Trigger: CCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp TCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGAGGAACCTCGGCGGGTaGCAGGAGGAGCTAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SLQPSSHLSSQGIQTATLRNLGG*QEELAG
Trigger: GCCCGCTAGCTCCTCCTGCCACCCGCCGAGGTTCCT...CAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAATGGGGAGAGGGGGTaGAGCAGGGCCCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: AGRAQARTVSVAGTSAGGNGERG*SRAHFQ
Trigger: CTGGAAGTGGGCCCTGCTCCACCCCCTCTCCCCATT...GCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CTCCCTGTGCCGGCAGCCCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGCACCTGTCCCAAAGGTaGGCTGCGATCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPVPAAQKRPSGRRPGPQHLSQR*AAIQRP
Trigger: AGGCCTTTGGATCGCAGCCCACCTTTGGGACAGGTG...CTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGGGCTGCCGGCACAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGCCGCCTCCTGCAGCTaGGTGCGGTGTGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPAASCS*VRCACS
Trigger: GCTGCAGGCACACCGCACCCAGCTGCAGGAGGCGGC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCCCTTCCTGGCCTCTCTaGCTAGCGCCTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AGRAQARTVSVAGTSAGGPSWPL*LAPASA
Trigger: AGCTGAGGCAGGCGCTAGCCAGAGAGGCCAGGAAGG...GCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACCCAGCTCGGCGTTGGTaGCCTCTGCCCTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHPARRW*PLPSAD
Trigger: GTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGG...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCCCGGGCGCGGCTCATaGCCTCCAGGTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPPGRGS*PPGPGA
Trigger: AGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACTGCAGCTGCTCCACGTaGGCTCCCTTCACCGCCACC +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHCSCST*APFTAT
Trigger: GGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCA...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp GCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCAACAGACCCTCCGGCTTaGCCAGCTTGGGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: ALVPPELPGHTDSNAGRATDPPA*PAWADP
Trigger: AGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGT...TGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGGGCTGCTTCCTGCCTaGAGGCTCCGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSGLLPA*RLRSPV
Trigger: CACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGGGCTGCTTCCTGCCTaGAGGCTCCGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGGLLPA*RLRSPV
Trigger: CACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCGGGCTGCTTCCTGCCTaGAGGCTCCGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASGLLPA*RLRSPV
Trigger: CACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCC...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR TCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAAGCCCTCGTCCCACCTaGGCTCCCAGGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRSPRPT*APRAYR
Trigger: TCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCT...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTAGGCCCAGCTGCACCTaGTCACGCTCCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRPSCT*SRSRLR
Trigger: GCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCTGGGATCGGGCCACCTGTaGCTTGAGCTTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: WSRAHFQARPSLQPSSHLGSGHL*LELHLF
Trigger: GAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCC...CAGGTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACCCTGAGAAGCATCTGTaGCCCTGGTCTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHPEKHL*PWSGEP
Trigger: GGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGG...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp TCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGGCTCCGCTCCCCCGTaGTGGGCTATCCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: SLQPSSHLSSQGIQTATLGSAPP*WAILRC
Trigger: GCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCC...CAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCTGGGGGCTGCTTCCTaGCTGAAGGCTCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPLGAAS*LKAPLP
Trigger: GGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGGGCCTCCTGTCGGCTaGTGGAGGAGCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPGPPVG*WRSWEL
Trigger: GAGCTCCCAGCTCCTCCAGCAGCCGACAGGAGGCCC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGGGTGCGGTGTGCCTaGAGCGCCCTCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPWVRCA*SALHSS
Trigger: GGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCCTCCTGCAGCTGGGTaGGGTGTGCCTGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGPPAAG*GVPAAP
Trigger: GGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGCACCGCAGTTTCCCCTaGGCCTCCTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLQPSSHLSSQGIQTATLHRSFP*ASSSWL
Trigger: GAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTG...CAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGAGCTCGCTCACCTCTaGCCGCCTGGCCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LVPPELPGHTDSNAGRAQELAHL*PPGLFP
Trigger: TGGGAAGAGGCCAGGCGGGCAGAGGTGAGCGAGCTC...CTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACCACCGCCACCAGCACTaGATCCTTCTCCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHHRHQH*ILLPGQ
Trigger: CTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTG...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGATGCAGCTCCTGCAGCTaGTCCACGTGGGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AEHRQGRFLWQEPRRVAGCSSCS*STWAPF
Trigger: GAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCA...TCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGGTCTCGCAGTGGGCCTaGAGCTCCAGAACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QPSSHLSSQGIQTATLAEVSQWA*SSRTLV
Trigger: GACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGAC...CTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCGGGGAAGCTCACGCTaGAGAGCGGCCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGRGSSR*RAAGSR
Trigger: CCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCACCTCCAGGTGTACCTaGTCCACCTCACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: AGRAQARTVSVAGTSAGGTSRCT*STSRGS
Trigger: GCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGT...GCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCCGCCTCCTGCAGCTaGGTGCGGTGTGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSAASCS*VRCACS
Trigger: GCTGCAGGCACACCGCACCCAGCTGCAGGAGGCGGC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACTGCGCCTCCTCCAGCTaGCTCCGTGTGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHCASSS*LRVSCR
Trigger: TCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCA...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGATCTCCAGCTCGGCGTTaGTGGCCTCTGCCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AEHRQGRFLWQEPRRVAGSPARR*WPLPSA
Trigger: TGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGA...TCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACCCGGGCGCGGCTCATaGCCTCCAGGTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSPGRGS*PPGPGA
Trigger: AGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGATCGAGGGTCTCGCAGTaGGCCTGCAGCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: AEHRQGRFLWQEPRRVAGSRVSQ*ACSSRT
Trigger: GGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGA...TCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GGGTGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACAGCCCAGTGGCAGCATaGTGGCCGTCTTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: GWSRAHFQARPSLQPSSHSPVAA*WPSFSI
Trigger: GATAGAGAAAGACGGCCACCATGCTGCCACTGGGCT...GTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
3UTR CAA 72 bp GCCTTCAGGCAGAAGGCCAGGGCCCCAGGGTTCACCTaGCCTGTCTCCCTTCCAACAAGGGTGGCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: AFRQKARAPGFT*PVSLPTRVAVL
Trigger: CAAGACCGCCACCCTTGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGGCCCTGGCCTTCTGCCTGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGACGTGCTGGGCTATCCTaGGATGCTTCCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AEHRQGRFLWQEPRRVAGRAGLS*DASPAQ
Trigger: CTGAGCTGGGGAAGCATCTCAGGATAGCCCAGCACG...TCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGGGCCAGAAGCAGAAGTaGGTGCCAGCCGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWGQKQK*VPAVVW
Trigger: CCACACAACGGCTGGCACTCACTTCTGCTTCTGGCC...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAGGCCCAGCTGCACCTaGTCACGCTCCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGRPSCT*SRSRLR
Trigger: GCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCTGCTCCTGTAGCGCCTaGTCTGTCTCCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AGRAQARTVSVAGTSAGGCSCSA*SVSCSL
Trigger: CAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCA...GCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGTGCATCCTCAGGGCCTaGACGGCCTGGTCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: SNAGRAQARTVSVAGTSACILRA*TAWSRS
Trigger: GGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCA...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGGTCTGGGGAGCCCATaGATCCTCAGGGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPGLGSP*ILRACT
Trigger: CGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAAGGTCTGGGGAGCCCATaGATCCTCAGGGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQGLGSP*ILRACT
Trigger: CGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACC...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGACGCAAGCTCGTGTTCTaGTCTCGGAGCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRRKLVF*SRSRWI
Trigger: GATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCG...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGTCGTCTCTGTCGAGGTaGGGACGCTGGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: ATLAEHRQGRFLWQEPRRSSLSR*GRWAET
Trigger: AGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGA...CCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACTGGGGGCTGCTTCCTaGCTGAAGGCTCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLGAAS*LKAPLP
Trigger: GGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTCCGAGGCTGGGGGCTaGTTCCTGCCTGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSEAGG*FLPEGS
Trigger: GGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGGGCGTCAAGTCTGCTaGCCACCTGTGCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPGRQVC*PPVLSG
Trigger: CCCGCTCAGCACAGGTGGGCAGCAGACTTGACGCCC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGCTTTGCTCAGGCCCTaGTTCCCTCCCTGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVALLRP*FPPCAG
Trigger: GCCGGCACAGGGAGGGAAGCAGGGCCTGAGCAAAGC...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGGGTGCGGTGTGCCTaGAGCGCCCTCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGWVRCA*SALHSS
Trigger: GGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCAGCTGGGTGCGGTGTaGCTGCAGCGCCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGQLGAV*LQRPPL
Trigger: GAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGCAGAGCCGCCTCCTaGAGCTGGGTGCGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGCRAAS*SWVRCA
Trigger: GGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGCAGAGCCGCCTCCTaGAGCTGGGTGCGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSCRAAS*SWVRCA
Trigger: GGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCACCGCAGTTTCCCCTaGGCCTCCTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPHRSFP*ASSSWL
Trigger: GAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGAGCTCGCTCACCTCTaGCCGCCTGGCCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPELAHL*PPGLFP
Trigger: TGGGAAGAGGCCAGGCGGGCAGAGGTGAGCGAGCTC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACTGGAATGCCAGCTGCTaGTGCTGCTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHWNASC*CCCSSS
Trigger: GGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCA...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGTCCTGGAATGCCAGCTaGTGCTGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QPSSHLSSQGIQTATLAESWNAS*CCCCSS
Trigger: GGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGA...CTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CTGGAGCTCCCCGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCGTTGGTGGCGGGACAAGGCTGTGTTaGTCATGTTGTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LELPGSALELPLQLGVGGGTRLC*SCCQPA
Trigger: TGCAGGCTGACAACATGAGCAACACAGCCTTGTCCC...GCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR GCA 90 bp TCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGGCGTTGGTGGCCTCTaGCCTCTGCAGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLQPSSHLSSQGIQTATLGVGGL*PLQTLC
Trigger: GCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCC...CAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGTCTCCACTCTGCCCTaGGGAGCTGCGCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGVSTLP*GAAPRG
Trigger: CCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGAC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGTCTCCACTCTGCCCTaGGGAGCTGCGCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSVSTLP*GAAPRG
Trigger: CCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGAC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTCATCACAGCGGCGCTaGCAGTCCAGGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSSQRR*QSRPSC
Trigger: GCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTAAAGCACAGGCACCATaGGGAGGCCCCGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPKAQAP*GGPEHP
Trigger: GGGGTGCTCGGGGCCTCCGCATGGTGCCTGTGCTTT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTTTGGGAGCCTGCCCTaGAGCTCCCTGCCTCCACCC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPFGSLP*SSLPPP
Trigger: GGGTGGAGGCAGGGAGCTGCAGGGCAGGCTCCCAAA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTAGGGCCTGCACGGCCTaGTCTCGTTCCAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRACTA*SRSRVT
Trigger: CGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGATCCGCTCCCCCGTGCTaGGCTATCCTGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRSAPPC*AILRCF
Trigger: GAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGA...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGCAGGCTAGAGTGCAGTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWQARVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACTGCACTCTAGCCTG...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCCAGTGGCAGCATGGTaGCCGCCTAACGCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGPVAAW*PPNARQ
Trigger: CTGGCGGGCGTTAGGCGGCCACCATGCTGCCACTGG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAAGCCCAGTGGCAGCATaGTGGCCGCCTAACGCCCGC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSPVAA*WPPNAR
Trigger: GCGGGCGTTAGGCGGCCACCATGCTGCCACTGGGCT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAGCCCAGTGGCAGCATaGTGGCCGCCTAACGCCCGC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSPVAA*WPPNAR
Trigger: GCGGGCGTTAGGCGGCCACCATGCTGCCACTGGGCT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCCTCTTCCCACTCCCTaGCCTGGGCGAAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGPLPTP*PGRRRR
Trigger: ACGCCGCCTTCGCCCAGGCCAGGGAGTGGGAAGAGG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACCTCTTCCCACTCCCTaGCCTGGGCGAAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSPLPTP*PGRRRR
Trigger: ACGCCGCCTTCGCCCAGGCCAGGGAGTGGGAAGAGG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGATCCAGGCGATGCTCCTaGAATGCCAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRSRRCS*NASCCC
Trigger: GCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGA...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp TCCCGGGACAAGGCTGTGTTGCTCATGTTGTCAGCCTGCAGACGGAATTCGTGCCCCGGGCGCGGCTCATaGCCTCCAGGTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SRDKAVLLMLSACRRNSCPGRGS*PPGPGA
Trigger: AGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGG...GCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CCA 90 bp GCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGACAGCGTCCTTCTCCTTaGCGGTGTCAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: AEHRQGRFLWQEPRRVAGQRPSP*RCQPVS
Trigger: GGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTG...TCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GGGTGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCACGAAGTTGGTCAATaGCAGCGTCCTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GWSRAHFQARPSLQPSSHHEVGQ*QRPSPW
Trigger: CCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTG...GTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GGGTGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCCAGTGGCAGCATGGTaGCCGTCTTTCTCTATCCTA +
Preference number: 4 (lower is better)
Translates to: GWSRAHFQARPSLQPSSHPVAAW*PSFSIL
Trigger: TAGGATAGAGAAAGACGGCCACCATGCTGCCACTGG...GTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp AACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCAGGCCTCCTGTCGGCTGCTaGAGGAGCTGGGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NCGRRLQERKEPRFLQGRPPVGC*RSWELS
Trigger: AGAGAGCTCCCAGCTCCTCCAGCAGCCGACAGGAGG...CCTGCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR TCA 90 bp GCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGGCCACCTGTGCCTTaGGCTTCACCTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AEHRQGRFLWQEPRRVAGGPPVP*ASPLLP
Trigger: AGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCC...TCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTACAGACCCTCCGGCTTaGCCAGCTTGGGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPTDPPA*PAWADP
Trigger: AGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp GAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGAGCAGCACCTTCTGTCTaGGTCGTGTCACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: EHRQGRFLWQEPRRVAGGAAPSV*VVSPAG
Trigger: ACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGC...TCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGTGTGATGGTGACCAGTaGGGCCCGCGCTGCATGTTT +
Preference number: 4 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWCDGDQ*GPRCMF
Trigger: AAACATGCAGCGCGGGCCTCACTGGTCACCATCACA...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GGGTGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACAGCTTGGCAGCAACCTaGCTTTTTGCCATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GWSRAHFQARPSLQPSSHSLAAT*LFAMLR
Trigger: TCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCT...GTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGACTGCTCATGTGCTGGTaGAAACCTCCCTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRLLMCW*KPPSPT
Trigger: GGTGGGAGAGGGAGGTTTTCACCAGCACATGAGCAG...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCATTCAGCACCACCTCCTaGTCCTGTAGCGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALVPPELPGHTDSNAGRAFSTTS*SCSACS
Trigger: AGAGCAGGCGCTACAGGAGCAGGAGGTGGTGCTGAA...TGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGCATCCTCAGGGCCTaGACGGCCTGGTCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPCILRA*TAWSRS
Trigger: GGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGGTCTGGGGAGCCCATaGATCCTCAGGGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGGLGSP*ILRACT
Trigger: CGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCCTGAGAAGCATCTGTaGCCCTGGTCTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPPEKHL*PWSGEP
Trigger: GGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGTGCATCTGTGCTCTCTaGCGCTGTCTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: ATLAEHRQGRFLWQEPRRCICAL*RCLDGR
Trigger: CCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCA...CCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACCCCGAGCTTCCTGAGTaGCAGTCCAGAGGATACTGG +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHPELPE*QSRGYW
Trigger: CCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGG...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCTTCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCCCAGCTCAGCCACCTaGTTCCGCAGCTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: PSLQPSSHLSSQGIQTATPSSAT*FRSSKT
Trigger: GGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGG...CGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGGCTCCGCTCCCCCGTaGTGGGCTATCCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSGSAPP*WAILRC
Trigger: GCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGGCTCCGCTCCCCCGTaGTGGGCTATCCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGGSAPP*WAILRC
Trigger: GCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCCGAGGCTGGGGGCTaGTTCCTGCCTGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSEAGG*FLPEGS
Trigger: GGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGGGATCTCGGTCTTGTTTCCGAGGCTGGGGGCTaGTTCCTGCCTGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RDLGLVQGLGLVGDLGLVSEAGG*FLPEGS
Trigger: GGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGA...AACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGGGCGTCAAGTCTGCTaGCCACCTGTGCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSGRQVC*PPVLSG
Trigger: CCCGCTCAGCACAGGTGGGCAGCAGACTTGACGCCC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGACATGTCCTGGAGGGTaGCACTGGCAAAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWTCPGG*HWQRRR
Trigger: CCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGT...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp AACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCAGGGTGGCAATGCCTGCCTaGATCTTGACGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NCGRRLQERKEPRFLQGRVAMPA*ILTGLL
Trigger: CAGGAGGCCCGTCAAGATGCAGGCAGGCATTGCCAC...CCTGCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR GCA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGTTCCTGGAGCCCACGTaGTCCTTACCAAGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWFLEPT*SLPSSP
Trigger: AGGCGAGCTTGGTAAGGAGCACGTGGGCTCCAGGAA...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGAGCTCGCTCACCTCTaGCCGCCTGGCCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSELAHL*PPGLFP
Trigger: TGGGAAGAGGCCAGGCGGGCAGAGGTGAGCGAGCTC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGATCTCTGGCTAGCGCCTaGCTCAGCTTAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: EHRQGRFLWQEPRRVAGGSLASA*LSLAAS
Trigger: AGAGGCAGCTAAGCTGAGGCAGGCGCTAGCCAGAGA...TCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGAATGCCAGCTGCTGCTaGTGCTGCAGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SNAGRAQARTVSVAGTSANASCC*CCSSST
Trigger: GGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATT...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGTCCAGCTCCAGGCGATaGTCCTGGAATGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVPPELPGHTDSNAGRAQSSSRR*SWNASC
Trigger: GCAGCTGGCATTCCAGGAGCATCGCCTGGAGCTGGA...CTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCGTTGGTGGCCTCTGCCCTCTCTCATGTTGTCAGCCTaGAGACGGAATTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLGSGASSPARRWWPLPSLMLSA*RRNSCS
Trigger: GGAGCACGAATTCCGTCTGCAGGCTGACAACATGAG...AGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR GCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAACTCTCTGCAGCCTTTaGCCCGGCTTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRTLCSL*PGFLQS
Trigger: GCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGT...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCACCGCCACCAGCACTaGATCCTTCTCCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPHRHQH*ILLPGQ
Trigger: CTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGTCCAGAACCCTGGTCTaGAGCTCCTGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LVPPELPGHTDSNAGRAQSRTLV*SSCSCS
Trigger: GGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGA...CTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGTCTCGCAGTGGGCCTaGAGCTCCAGAACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPVSQWA*SSRTLV
Trigger: GACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGAC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAAGCCTGTCTCCACTCTaGCCTGCGGAGCTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSLSPL*PAELRL
Trigger: GAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCTGTACCTTTCAATGTCCTaGTGGGATCGGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: WSRAHFQARPSLQPSSHLYLSMS*WDRATC
Trigger: ACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTA...CAGGTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCATCACAGCGGCGCTaGCAGTCCAGGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSSQRR*QSRPSC
Trigger: GCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAAAAGCACAGGCACCATaGGGAGGCCCCGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSKAQAP*GGPEHP
Trigger: GGGGTGCTCGGGGCCTCCGCATGGTGCCTGTGCTTT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAGGGCCTGCACGGCCTaGTCTCGTTCCAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGRACTA*SRSRVT
Trigger: CGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAAGCATCTGTGCCCCTaGTCTGGGGAGCCCATGCAT +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHKHLCP*SGEPMH
Trigger: ATGCATGGGCTCCCCAGACCAGGGGCACAGATGCTT...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCTGCCGCTGTCTGGATaGGAGGAGGAATCTGATGGC +
Preference number: 4 (lower is better)
Translates to: QPSSHLSSQGIQTATLAELPLSG*EEESDG
Trigger: GCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAG...CTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCGAACATAATCAGGAGTaGCGGCATCTCCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AGRAQARTVSVAGTSAGGEHNQE*RHLPQP
Trigger: AGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTC...GCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGAAGAAGGCGGAGGAATaGGGAGAGGGGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SNAGRAQARTVSVAGTSAKKAEE*GEGVEQ
Trigger: CTGCTCCACCCCCTCTCCCCATTCCTCCGCCTTCTT...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGCGCCTCCTCCAGCTaGCTCCGTGTGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPCASSS*LRVSCR
Trigger: TCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAAGCTCCTCCACCTTCCTaGCCTCTCTGGCTAGCGCCT +
Preference number: 4 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQAPPPS*PLWLAP
Trigger: AGGCGCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGC...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGCTCCTCCACCTTCCTaGCCTCTCTGGCTAGCGCCT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPAPPPS*PLWLAP
Trigger: AGGCGCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACCATTCTTGTCACTGTaGACGCGCTCCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALVPPELPGHTDSNAGRAPFLSL*TRSSSR
Trigger: CCTGGAGCTGGAGCGCGTCCACAGTGACAAGAATGG...TGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCCAGCTCGGCGTTGGTaGCCTCTGCCCTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGPARRW*PLPSAD
Trigger: GTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTCTCCAGCTCGGCGTTaGTGGCCTCTGCCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSPARR*WPLPSA
Trigger: TGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATCCCCGGCTCGGCTCTaGAGCTTCCTCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSPARL*SFLSSS
Trigger: CGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCCCCGGCTCGGCTCTaGAGCTTCCTCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSPARL*SFLSSS
Trigger: CGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGCAGCTGCTCCACGTaGGCTCCCTTCACCGCCACC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSCSCST*APFTAT
Trigger: GGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTCGAGGGTCTCGCAGTaGGCCTGCAGCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSRVSQ*ACSSRT
Trigger: GGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCGCCTCAGCAGCATTTaGGAGCCTGCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRLSSI*EPALQL
Trigger: GAGCTGCAGGGCAGGCTCCCAAATGCTGCTGAGGCG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp GCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGACAGATCCTCCTGCTTaGCCAGCTTGGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: ATLAEHRQGRFLWQEPRRTDPPA*PAWTDP
Trigger: AGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGT...CCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCGTGCTGGGCTATCCTaGGATGCTTCCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRAGLS*DASPAQ
Trigger: CTGAGCTGGGGAAGCATCTCAGGATAGCCCAGCACG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGGGAGCTCTGGAGTTaGGTCACCCTGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPWELWS*VTLGGD
Trigger: GTCACCTCCCAGGGTGACTCAACTCCAGAGCTCCCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACCTGAGAAGCATCTGTaGCCCTGGTCTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSPEKHL*PWSGEP
Trigger: GGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCGCAAGCTCGTGTTCTaGTCTCGGAGCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRKLVF*SRSRWI
Trigger: GATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp AACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCAGGACATGTCCTGGAGGGTaGCACTGGCAAAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NCGRRLQERKEPRFLQGRTCPGG*HWQRRR
Trigger: CCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGT...CCTGCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGTGGCAATGCCTGCCTaGATCTTGACGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPVAMPA*ILTGLL
Trigger: CAGGAGGCCCGTCAAGATGCAGGCAGGCATTGCCAC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp AAGAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCTGGGGTGGCAATGCCTaGCTGCATCTTGACGGGCCT +
Preference number: 4 (lower is better)
Translates to: KNCGRRLQERKEPRFLQGWGGNA*LHLDGP
Trigger: AGGCCCGTCAAGATGCAGGCAGGCATTGCCACCCCA...GCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGGCCTTTGCCTGGGCTaGTGTCTTCATCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPGLCLG*CLHPWG
Trigger: ACCCCAGGGATGAAGACAGCAGCCCAGGCAAAGGCC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTCCAAGGCGGCAGGACTaGTTGAGCCCAGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVPRRQD*LSPGVR
Trigger: TCGAACTCCTGGGCTCAAGCAGTCCTGCCGCCTTGG...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGCGCGCTGCATGTTTTTaGACACTGAGGAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWRAACF*TLRSCL
Trigger: GAGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCG...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAAGCAGTTCCTGTCTCTaGAGAGCAAGCTCACCGTCG +
Preference number: 4 (lower is better)
Translates to: AEHRQGRFLWQEPRRVAGSSSCL*RASSPS
Trigger: CGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCT...TCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGGCGTTGGTGGCCTCTaGCCTCTGCAGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSGVGGL*PLQTLC
Trigger: GCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGGCGTTGGTGGCCTCTaGCCTCTGCAGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGGVGGL*PLQTLC
Trigger: GCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCACCGCCACCAGCACTaGATCCTTCTCCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGHRHQH*ILLPGQ
Trigger: CTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGCAGCTCCTGCAGCTaGTCCACGTGGGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSCSSCS*STWAPF
Trigger: GAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGTCTCGCAGTGGGCCTaGAGCTCCAGAACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSVSQWA*SSRTLV
Trigger: GACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGAC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGCCGCTCCCTTTCCACTaGCAGGGACAGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLQPSSHLSSQGIQTATLPLPFH*QGQLLL
Trigger: AAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGG...CAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCAGCATTTGGGAGCCTaGCCTGCAGCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGQHLGA*PAAPCL
Trigger: GAGGCAGGGAGCTGCAGGGCAGGCTCCCAAATGCTG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCTGTGCGGCAGAACTGACTaGTCATGTGCTGGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: WSRAHFQARPSLQPSSHLCGRTD*SCAGEN
Trigger: GTTTTCACCAGCACATGAGCAGTCAGTTCTGCCGCA...CAGGTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCAGTGGGGAGTGGGCGCGTaGTCACACTCTTTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ELWPASPGKEGASLSPGQWGVGA*SHSLSC
Trigger: GCAGCTTAAAGAGTGTGAGCACGCGCCCACTCCCCA...CTGCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR CCA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGCTTTCAATGTCCTGCTaGGATCGGGCCACCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SNAGRAQARTVSVAGTSALSMSC*DRATCA
Trigger: GGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAG...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGAGCCTCTGGGTCAGGCTaGTTTGCATCTGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: EHRQGRFLWQEPRRVAGGASGSG*FASVLS
Trigger: AGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGC...TCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTCGAGGTGCGGACGCTaGGCTGAGACTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSRCGR*AETQHE
Trigger: CTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGACAGTCCAGAGGATACTaGGCCAGCTTGGACAGATCC +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRQSRGY*ASLDRS
Trigger: GGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTG...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTACCTCCAGGTGTACCTaGTCCACCTCACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPTSRCT*STSRGS
Trigger: GCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAACAAGGACGGTTTCTGTaGCAGGAACCTCGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQQGRFL*QEPRRV
Trigger: CACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTG...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCATACAGACAGCAACGCTaGCAGAGCACAGGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ALVPPELPGHTDSNAGRAYRQQR*QSTGKD
Trigger: GTCCTTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTA...TGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCAAGAAGAGGAGGCGTGTaGAGGAAGAAGGCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ALVPPELPGHTDSNAGRARRGGV*RKKAEE
Trigger: TTCCTCCGCCTTCTTCCTCCACACGCCTCCTCTTCT...TGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGAGGAGCTGTGGGATTaGCGACCATGCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPEELWD*RPCSSG
Trigger: CCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp AACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCAGGTGCTGTCTTCATCCCTaGGGTGGCAATGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NCGRRLQERKEPRFLQGRCCLHP*GGNACL
Trigger: CAGGCAGGCATTGCCACCCCAGGGATGAAGACAGCA...CCTGCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR CCA 90 bp CTCCCTGTGCCGGCAGCCCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGCAGAGCACTGGTTCTTaGATTCCTGTAGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LPVPAAQKRPSGRRPGPQQSTGS*IPVASV
Trigger: CACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTG...CTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGGGCTGCCGGCACAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGTCCACAGTGATCACTaGGGACCCATCCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVVHSDH*GPIPLA
Trigger: AGCCAGGGGGATGGGTCCCCAGTGATCACTGTGGAC...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGCGCCTCCTCCAGCTaGCTCCGTGTGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGCASSS*LRVSCR
Trigger: TCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCCTTCCTGGCCTCTCTaGCTAGCGCCTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGPSWPL*LAPASA
Trigger: AGCTGAGGCAGGCGCTAGCCAGAGAGGCCAGGAAGG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGCTCCTCCACCTTCCTaGCCTCTCTGGCTAGCGCCT +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGAPPPS*PLWLAP
Trigger: AGGCGCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTCCAGGCGATGCTCCTaGAATGCCAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSRRCS*NASCCC
Trigger: GCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGAGCTCCCCGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCGTTGGTGGTCATACTGTTCCCGGTaGTGGTCAATCTCACCATTC +
Preference number: 4 (lower is better)
Translates to: PGAPRLGSGASSPARRWWSYCSR*WSISPF
Trigger: GAATGGTGAGATTGACCACCACCGGGAACAGTATGA...CCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGAGGGTCTCGCAGTaGGCCTGCAGCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSRVSQ*ACSSRT
Trigger: GGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACGCCTCAGCAGCATTTaGGAGCCTGCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSRLSSI*EPALQL
Trigger: GAGCTGCAGGGCAGGCTCCCAAATGCTGCTGAGGCG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCATCCTCGGCACTCTTaGCGTCCTCTCTCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPHPRHS*RPLSQG
Trigger: CCCTTGGGAGAGAGGACGCCAAGAGTGCCGAGGATG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389641.9
CDS-3UTR CCA 90 bp TTCACTGAAGAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTGGCCGGGTGTGTCTGTaGGGAGTGGGCGCGTGCTCA +
Preference number: 4 (lower is better)
Translates to: FTEELWPASPGKEGASLSGRVCL*GVGACS
Trigger: TGAGCACGCGCCCACTCCCCACAGACACACCCGGCC...AGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTTCAGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR CCA 90 bp AACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCAGGGGCTGCTGGAGGAGCTaGGAGCTCTCTATGACCAGA +
Preference number: 4 (lower is better)
Translates to: NCGRRLQERKEPRFLQGRGCWRS*ELSMTR
Trigger: TCTGGTCATAGAGAGCTCCCAGCTCCTCCAGCAGCC...CCTGCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR TCA 90 bp CCTTCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTTCTTCATGCTGCCTaGGAAGCATCTGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PSLQPSSHLSSQGIQTATLLHAA*EASVPL
Trigger: CAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAG...CGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAATGTCCCCGAGCTTCCTaGGTGCCAGTCCAGAGGATA +
Preference number: 4 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQCPRAS*VPVQRI
Trigger: TATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACA...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGCAGCACCTTCTGTCTaGGTCGTGTCACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPAAPSV*VVSPAG
Trigger: ACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACGTGCTGGGCTATCCTaGGATGCTTCCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSRAGLS*DASPAQ
Trigger: CTGAGCTGGGGAAGCATCTCAGGATAGCCCAGCACG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp TCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGAACGGGGCATCAAGGTaGAGGACCAGGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLQPSSHLSSQGIQTATLNGASR*RTRRRG
Trigger: TCCTCTTCTCCTGGTCCTTCACCTTGATGCCCCGTT...CAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTGGGGGCACGTGCCACTaGCCGGAGGTGCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPAGGTCH*PEVQEK
Trigger: CTTTTCCTGCACCTCCGGTCAGTGGCACGTGCCCCC...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGACTGAATCAGGGCCTCTaGCTTTTGGATCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRLNQGL*LLDLVP
Trigger: AGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAG...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGGGAGCTCTGGAGTTaGGTCACCCTGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGWELWS*VTLGGD
Trigger: GTCACCTCCCAGGGTGACTCAACTCCAGAGCTCCCA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCGCAAGCTCGTGTTCTaGTCTCGGAGCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGRKLVF*SRSRWI
Trigger: GATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGCATCTGTGCTCTCTaGCGCTGTCTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPCICAL*RCLDGR
Trigger: CCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCTGGTTTGCATCTGTaGTCTCTGCCGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LVPPELPGHTDSNAGRAQAGLHL*SLPLSG
Trigger: TCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGC...CTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAATGGGTCAGGCTGGTTTaGATCTGTGCTCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQWVRLV*ICALCR
Trigger: GCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCA...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGTCTCTGTCGAGGTaGGGACGCTGGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSSLSR*GRWAET
Trigger: AGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCCCGAGCTTCCTGAGTaGCAGTCCAGAGGATACTGG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPPELPE*QSRGYW
Trigger: CCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGAGCAGGTTTAGGAGCTaGACTCTGTCCCCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLQPSSHLSSQGIQTATLSRFRS*TLSPSF
Trigger: GAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCT...CAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACCCAGCTCAGCCACCTaGTTCCGCAGCTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSPSSAT*FRSSKT
Trigger: GGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGGGCTATCCTGAGATaGTTCCCCAGCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPWAILR*FPSSAT
Trigger: GGTGGCTGAGCTGGGGAAGCATCTCAGGATAGCCCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAATGGGCTATCCTGAGATaGTTCCCCAGCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQWAILR*FPSSAT
Trigger: GGTGGCTGAGCTGGGGAAGCATCTCAGGATAGCCCA...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTTGGGCTATCCTGAGATaGTTCCCCAGCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVWAILR*FPSSAT
Trigger: GGTGGCTGAGCTGGGGAAGCATCTCAGGATAGCCCA...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGGGATTGGCGACCATaGTCCTCAGGGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGWDWRP*SSGCWG
Trigger: TCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGGGATTGGCGACCATaGTCCTCAGGGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSWDWRP*SSGCWG
Trigger: TCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GCTCTCTATGACCAGAGAGTGAAGCGTTTCACTGAAGAACTGTGGCCGGCGTCTGGGCCTCCTGTCGGCTaGTGGAGGAGCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ALYDQRVKRFTEELWPASGPPVG*WRSWEL
Trigger: GAGCTCCCAGCTCCTCCAGCAGCCGACAGGAGGCCC...AGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCACTCTCTGGTCATAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGGGGTGGCAATGCCTaGCTGCATCTTGACGGGCCT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSWGGNA*LHLDGP
Trigger: AGGCCCGTCAAGATGCAGGCAGGCATTGCCACCCCA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGGCCTTTGCCTGGGCTaGTGTCTTCATCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSGLCLG*CLHPWG
Trigger: ACCCCAGGGATGAAGACAGCAGCCCAGGCAAAGGCC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTAAGGGTGCTCAGCTTTaGTCAGGCCCTGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVKGAQL*SGPASL
Trigger: GAGGGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTT...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAATGCCAGCTGCTGCTaGTGCTGCAGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGNASCC*CCSSST
Trigger: GGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGGAATGCCAGCTGCTaGTGCTGCTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGWNASC*CCCSSS
Trigger: GGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGGAATGCCAGCTGCTaGTGCTGCTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSWNASC*CCCSSS
Trigger: GGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCCTGGAATGCCAGCTaGTGCTGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSWNAS*CCCCSS
Trigger: GGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATCCTGGAATGCCAGCTaGTGCTGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSWNAS*CCCCSS
Trigger: GGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATCCAGCTCCAGGCGATaGTCCTGGAATGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSSSRR*SWNASC
Trigger: GCAGCTGGCATTCCAGGAGCATCGCCTGGAGCTGGA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCTCATGTTGTCAGCCTaGAGACGGAATTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QPSSHLSSQGIQTATLAELMLSA*RRNSCS
Trigger: GGAGCACGAATTCCGTCTGCAGGCTGACAACATGAG...CTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTACTCTCTGCAGCCTTTaGCCCGGCTTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPTLCSL*PGFLQS
Trigger: GCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATCCAGAACCCTGGTCTaGAGCTCCTGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSRTLV*SSCSCS
Trigger: GGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCCGCTCCCTTTCCACTaGCAGGGACAGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPPLPFH*QGQLLL
Trigger: AAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTAAGCATCTGTGCCCCTaGTCTGGGGAGCCCATGCAT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPKHLCP*SGEPMH
Trigger: ATGCATGGGCTCCCCAGACCAGGGGCACAGATGCTT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGTGCTCTCGGAGCCGCTaGATCTCACTGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: SNAGRAQARTVSVAGTSACSRSR*ISLDGK
Trigger: CTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCA...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGAGGTGCGGACGCTaGGCTGAGACTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSRCGR*AETQHE
Trigger: CTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAACCTCCAGGTGTACCTaGTCCACCTCACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSTSRCT*STSRGS
Trigger: GCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCCGCTCCCCCGTGCTaGGCTATCCTGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSAPPC*AILRCF
Trigger: GAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATCCGCTCCCCCGTGCTaGGCTATCCTGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSAPPC*AILRCF
Trigger: GAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGAGGAGCTGTGGGATTaGCGACCATGCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSEELWD*RPCSSG
Trigger: CCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGGAGTTGAGTCACCCTaGGAGGTGACACCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPGVESP*EVTPEG
Trigger: CCCTTCTGGTGTCACCTCCCAGGGTGACTCAACTCC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGCTGTCTTCATCCCTaGGGTGGCAATGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPCCLHP*GGNACL
Trigger: CAGGCAGGCATTGCCACCCCAGGGATGAAGACAGCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCAGGTCTTGGCCTTTGCCTaGGCTGCTGTCTTCATCCCT +
Preference number: 4 (lower is better)
Translates to: ELWPASPGKEGASLSPGQVLAFA*AAVFIP
Trigger: AGGGATGAAGACAGCAGCCCAGGCAAAGGCCAAGAC...CTGCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR CCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCAGGAAAAGCTCCCCCTaGTCCTCGGCCTCCATAGGC +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASRKSSP*SSASIG
Trigger: GCCTATGGAGGCCGAGGACCAGGGGGAGCTTTTCCT...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTTGTGCTGAGCGGGGCTaGTGCTTTCCCAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVCAERG*CFPKCL
Trigger: CAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACA...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCTCCCCCTCGCATTCCTaGAGCCCACGTGCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASSPSHS*SPRAPY
Trigger: GTAAGGAGCACGTGGGCTCCAGGAATGCGAGGGGGA...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCCAGGCGATGCTCCTaGAATGCCAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSRRCS*NASCCC
Trigger: GCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp TCCCGGGACAAGGCTGTGTTGCTCATGTTGTCAGCCTGCAGACGGAATTCGTGCTCTCCAGCTCGGCGTTaGTGGCCTCTGCCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRDKAVLLMLSACRRNSCSPARR*WPLPSA
Trigger: TGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGA...GCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCAGCGTCCTTCTCCTTaGCGGTGTCAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGQRPSP*RCQPVS
Trigger: GGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGGGCCACCTGTGCCTTaGGCTTCACCTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSGPPVP*ASPLLP
Trigger: AGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGTCCCCGAGCTTCCTaGGTGCCAGTCCAGAGGATA +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSCPRAS*VPVQRI
Trigger: TATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGTCCCCGAGCTTCCTaGGTGCCAGTCCAGAGGATA +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGCPRAS*VPVQRI
Trigger: TATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCTGTCCCCGAGCTTCCTaGGTGCCAGTCCAGAGGATA +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASCPRAS*VPVQRI
Trigger: TATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACA...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGCAGCACCTTCTGTCTaGGTCGTGTCACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGAAPSV*VVSPAG
Trigger: ACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGGGATCTCGGTCTTGTTCCCCATTTCTGGAGTTaGGTCACCCTGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RDLGLVQGLGLVGDLGLVPHFWS*VTLGGD
Trigger: GTCACCTCCCAGGGTGACTCAACTCCAGAAATGGGG...AACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACCCACAACACGTAGGTaGAAGCACAGGCACCATGCG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSPTTRR*KHRHHA
Trigger: CGCATGGTGCCTGTGCTTTCACCTACGTGTTGTGGG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp AACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCAGGATGAAGTTCTGGAGTTaGGTCACCCTGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: NCGRRLQERKEPRFLQGRMKFWS*VTLGGD
Trigger: GTCACCTCCCAGGGTGACTCAACTCCAGAACTTCAT...CCTGCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGGATCGGGCCACCTGTaGCTTGAGCTTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGGSGHL*LELHLF
Trigger: GAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGCTCCTGTAGCGCCTaGTCTGTCTCCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSCSCSA*SVSCSL
Trigger: CAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGCTCCTGTAGCGCCTaGTCTGTCTCCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGCSCSA*SVSCSL
Trigger: CAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATTCAGCACCACCTCCTaGTCCTGTAGCGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSFSTTS*SCSACS
Trigger: AGAGCAGGCGCTACAGGAGCAGGAGGTGGTGCTGAA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGCATCTGTGCTCTCTaGCGCTGTCTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGCICAL*RCLDGR
Trigger: CCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGGGTCAGGCTGGTTTaGATCTGTGCTCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGWVRLV*ICALCR
Trigger: GCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGGGTCAGGCTGGTTTaGATCTGTGCTCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSWVRLV*ICALCR
Trigger: GCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACCCGAGCTTCCTGAGTaGCAGTCCAGAGGATACTGG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSPELPE*QSRGYW
Trigger: CCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTAGCAGGTTTAGGAGCTaGACTCTGTCCCCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSRFRS*TLSPSF
Trigger: GAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACGGGCGTCAAGTCTGCTaGCCACCTGTGCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LAGASVCHDRVRGLEVVHGRQVC*PPVLSG
Trigger: CCCGCTCAGCACAGGTGGGCAGCAGACTTGACGCCC...GTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAACATGTCCTGGAGGGTaGCACTGGCAAAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSTCPGG*HWQRRR
Trigger: CCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGCAGCCTTTAGCTTTTaGAGGATGAGACCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPAAFSF*RMRPGG
Trigger: GCCTCCCGGTCTCATCCTGCAAAAGCTAAAGGCTGC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCCCCATCTCGATGAGCTaGTCTTTCTCCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASPISMS*SFSRRR
Trigger: CCTCCGCCTGGAGAAAGAGCAGCTCATCGAGATGGG...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGTCACCAGCGTGACCTaGTCTCTCAGTCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVVTSVT*SLSHSL
Trigger: CAAGCTGTGACTGAGAGAGCAGGTCACGCTGGTGAC...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTGCTTCCCTCCCTGTaGCGGCAGCCCAGAAACGGC +
Preference number: 4 (lower is better)
Translates to: LAGASVCHDRVRGLEVVHLLPSL*RQPRNG
Trigger: GCCGTTTCTGGGCTGCCGGCACAGGGAGGGAAGCAG...GTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGCTGCCTCAGCTTAGCTaGCTCTATCTTGAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: LVPPELPGHTDSNAGRAQLPQLS*LYLELA
Trigger: AGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAG...CTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCTCTGGCTAGCGCCTaGCTCAGCTTAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSLASA*LSLAAS
Trigger: AGAGGCAGCTAAGCTGAGGCAGGCGCTAGCCAGAGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TCTAAATCCTTTACCCGGGCGCGGCTCATGGCCTCCAGGTCCTGGAGCTCCCCGTGCAGACGGAATTCGTaGTCCCTCTTCCGCATTTTC +
Preference number: 4 (lower is better)
Translates to: SKSFTRARLMASRSWSSPCRRNS*SLFRIF
Trigger: GAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCA...CGGGGAGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGATTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR GCA 90 bp TCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGGGACAAGGCTGTGTTaGTCATGTTGTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLQPSSHLSSQGIQTATLGTRLC*SCCQPA
Trigger: TGCAGGCTGACAACATGAGCAACACAGCCTTGTCCC...CAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAACTCTCTGCAGCCTTTaGCCCGGCTTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSTLCSL*PGFLQS
Trigger: GCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGCCAGGGACAGCTGTTaGTTGTACCTTTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: AEHRQGRFLWQEPRRVAGARDSC*LYLSMS
Trigger: GGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGC...TCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACCGCTCCCTTTCCACTaGCAGGGACAGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSPLPFH*QGQLLL
Trigger: AAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGACCTGACTTTTTGCCATaGTCAGACCCTGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: EHRQGRFLWQEPRRVAGGPDFLP*SDPESG
Trigger: CCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGG...TCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCTTTCAATGTCCTGCTaGGATCGGGCCACCTGTGCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGLSMSC*DRATCA
Trigger: GGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGCTCTCGGAGCCGCTaGATCTCACTGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPCSRSR*ISLDGK
Trigger: CTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCTGCCGCTGTCTGGATaGGAGGAGGAATCTGATGGC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGLPLSG*EEESDG
Trigger: GCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACTGCCGCTGTCTGGATaGGAGGAGGAATCTGATGGC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLPLSG*EEESDG
Trigger: GCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGCCTCTGGGTCAGGCTaGTTTGCATCTGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPASGSG*FASVLS
Trigger: AGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCAGTCCAGAGGATACTaGGCCAGCTTGGACAGATCC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPQSRGY*ASLDRS
Trigger: GGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAAAGGAGGAGGAGCTGTaGGATTGGCGACCATGCTCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSKEEEL*DWRPCS
Trigger: GGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAAGGAGGAGGAGCTGTaGGATTGGCGACCATGCTCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGKEEEL*DWRPCS
Trigger: GGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGGAGTTGAGTCACCCTaGGAGGTGACACCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGGVESP*EVTPEG
Trigger: CCCTTCTGGTGTCACCTCCCAGGGTGACTCAACTCC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTCTTCATCCCTGGGGTaGCAATGCCTGCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSSSLG*QCLPAS
Trigger: AGATGCAGGCAGGCATTGCCACCCCAGGGATGAAGA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp AAGAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCTCTTCATCCCTGGGGTaGCAATGCCTGCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: KNCGRRLQERKEPRFLQGSSSLG*QCLPAS
Trigger: AGATGCAGGCAGGCATTGCCACCCCAGGGATGAAGA...GCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGCTTTCCCAAGTGTCTaGAAGGAGCCTCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPAFPSV*KEPHPR
Trigger: CCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGCTTTCCCAAGTGTCTaGAAGGAGCCTCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVAFPSV*KEPHPR
Trigger: CCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGC...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGTGCTGAGCGGGGCTaGTGCTTTCCCAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSCAERG*CFPKCL
Trigger: CAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCCATTCTTGTCACTGTaGACGCGCTCCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGPFLSL*TRSSSR
Trigger: CCTGGAGCTGGAGCGCGTCCACAGTGACAAGAATGG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GCTCATGTTGTCAGCCTGCAGACGGAATTCGTGCTCCCTCTTCCGCATTTTCGACCAGCTCGGCGTTGGTaGCCTCTGCCCTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: AHVVSLQTEFVLPLPHFRPARRW*PLPSAD
Trigger: GTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGG...TCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CCA 90 bp CCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACGCATCTTCACGAAGTTaGTCAATGGCAGCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSSHLSSQGIQTATLAEHASSRS*SMAASF
Trigger: GAAGGACGCTGCCATTGACCAACTTCGTGAAGATGC...GTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACATCCTCGGCACTCTTaGCGTCCTGCTCTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSHPRHS*RPALSQ
Trigger: TTGGGAGAGAGCAGGACGCCAAGAGTGCCGAGGATG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392347.5
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACTTCTTCATGCTGCCTaGGAAGCATCTGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLLHAA*EASVPL
Trigger: CAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGACAGATCCTCCTGCTTaGCCAGCTTGGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGTDPPA*PAWTDP
Trigger: AGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAACAGATCCTCCTGCTTaGCCAGCTTGGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSTDPPA*PAWTDP
Trigger: AGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTTAGCTTTTGCAGGATaGGACCGGGAGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGLAFAG*DREAPV
Trigger: CACAGGAGCCTCCCGGTCTCATCCTGCAAAAGCTAA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATTAGCTTTTGCAGGATaGGACCGGGAGGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLAFAG*DREAPV
Trigger: CACAGGAGCCTCCCGGTCTCATCCTGCAAAAGCTAA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCTGAATCAGGGCCTCTaGCTTTTGGATCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPLNQGL*LLDLVP
Trigger: AGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp GCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACTCTCCCACCACATTTaGTCACAGAAGTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ALVPPELPGHTDSNAGRALSHHI*SQKSSS
Trigger: AGAGGAAGACTTCTGTGATCAAATGTGGTGGGAGAG...TGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGCTGGTTTGCATCTGTaGTCTCTGCCGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGAGLHL*SLPLSG
Trigger: TCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAAGCAGGTTTAGGAGCTaGACTCTGTCCCCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSRFRS*TLSPSF
Trigger: GAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAGGTCACCGTGTGGATaGTGTGTTGTGTCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGRSPCG*CVVSSG
Trigger: GCCCGAAGACACAACACAGCATCCACACGGTGACCT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TTCACTGAAGAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTGGCCTTTGCCTGGGCTaGTGTCTTCATCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FTEELWPASPGKEGASLSGLCLG*CLHPWG
Trigger: ACCCCAGGGATGAAGACAGCAGCCCAGGCAAAGGCC...AGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTTCAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGTGGTCTTGGCCTTTaGCTGGGCTGCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPCGLGL*LGCCLH
Trigger: ATGAAGACAGCAGCCCAGGCAAAGGCCAAGACCACA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGCAGCCTTTAGCTTTTaGAGGATGAGACCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGAAFSF*RMRPGG
Trigger: GCCTCCCGGTCTCATCCTGCAAAAGCTAAAGGCTGC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCGGGTCGGCCCAGCTCTaGACGGAGCCTGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCGSAQL*TEPVPH
Trigger: ATGGGGAACAGGCTCCGTGCAGAGCTGGGCCGACCC...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTCCAAGGCGGCAGGACTaGTTGAGCCCAGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPAPRRQD*LSPGVR
Trigger: TCGAACTCCTGGGCTCAAGCAGTCCTGCCGCCTTGG...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGGGATCTCGGTCTTGTTCCCCAGGGTTCACCTTaGCTGTCTCCCTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: RDLGLVQGLGLVGDLGLVPQGSP*LSPFQQ
Trigger: TTGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGG...AACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGTTTGAGACAGGAGTCTaGTCTGTCACTCAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWFETGV*SVTQAR
Trigger: TCTAGCCTGAGTGACAGAGCAGACTCCTGTCTCAAA...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCTGCCTCAGCTTAGCTaGCTCTATCTTGAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPLPQLS*LYLELA
Trigger: AGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAGCAGTTCCTGTCTCTaGAGAGCAAGCTCACCGTCG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSSSCL*RASSPS
Trigger: CGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCGGTCGAGCTCCTCATaGTTCCTCTTAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: QPSSHLSSQGIQTATLAERSSSS*FLLNVS
Trigger: GGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCG...CTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTACCTTTCAATGTCCTaGTGGGATCGGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPYLSMS*WDRATC
Trigger: ACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGCTCTCGGAGCCGCTaGATCTCACTGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSCSRSR*ISLDGK
Trigger: CTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCCTCTGGGTCAGGCTaGTTTGCATCTGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSASGSG*FASVLS
Trigger: AGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGAACATAATCAGGAGTaGCGGCATCTCCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSEHNQE*RHLPQP
Trigger: AGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCAGTCCAGAGGATACTaGGCCAGCTTGGACAGATCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGQSRGY*ASLDRS
Trigger: GGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAAGCCTGGGGTGGCTTTaGGGACCTGTCTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSLGWL*GPVFFL
Trigger: CAGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGGGATCTCGGTCTTGTTAGCCTGGGGTGGCTTTaGGGACCTGTCTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RDLGLVQGLGLVGDLGLVSLGWL*GPVFFL
Trigger: CAGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCT...AACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAGCCTGGGGTGGCTTTaGGGACCTGTCTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSLGWL*GPVFFL
Trigger: CAGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAAACCTCCACATGTCCTaGAGGGTGCCACTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSNLHMS*RVPLAK
Trigger: CTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAACCTCCACATGTCCTaGAGGGTGCCACTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGNLHMS*RVPLAK
Trigger: CTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGTCTTGGCCTTTGCCTaGGCTGCTGTCTTCATCCCT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSVLAFA*AAVFIP
Trigger: AGGGATGAAGACAGCAGCCCAGGCAAAGGCCAAGAC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGTAGTTACGGATCTTaGGGGGCCTCTGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSCSYGS*GASGSL
Trigger: AAGGCTGCCAGAGGCCCCCCAAGATCCGTAACTACA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCTGCATAGATAAGGTCTaGGGGGCACGTGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASCIDKV*GARATD
Trigger: GTCAGTGGCACGTGCCCCCCAGACCTTATCTATGCA...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCTTTCCCAAGTGTCTaGAAGGAGCCTCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSAFPSV*KEPHPR
Trigger: CCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCACGCCAGGCTGGGCGTaGGGCCCACACCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCTPGWA*GPHLSS
Trigger: AGATGACAGGTGTGGGCCCCACGCCCAGCCTGGCGT...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCACGAAGTTGGTCAATaGCAGCGTCCTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPHEVGQ*QRPSPW
Trigger: CCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGCTGTCTCCTGCAGCTTaGCAGCAACCTGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: SNAGRAQARTVSVAGTSALSPAA*QQPDFL
Trigger: CAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAG...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTATGGGAGGAGGAATCTaGTGGCTTAGAGCCTCCATT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPMGGGI*WLRASI
Trigger: AATGGAGGCTCTAAGCCATCAGATTCCTCCTCCCAT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTTCTTTCTGCCGAGGTaGTTTACAGGTCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPFFLPR*FTGHRV
Trigger: CACACGGTGACCTGTAAATCACCTCGGCAGAAAGAA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTTGGTTCATGTTTGGGTaGAGGGCTCCACTCCACGCC +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPAWFMFG*RAPLHA
Trigger: GGCGTGGAGTGGAGCCCTTCACCCAAACATGAACCA...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCTGAATCAGGGCCTCTaGCTTTTGGATCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGLNQGL*LLDLVP
Trigger: AGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTAGCTTGGCAGCAACCTaGCTTTTTGCCATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSLAAT*LFAMLR
Trigger: TCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAATTTCTTCTTCATGCTaGCTGAGAAGCATCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AEHRQGRFLWQEPRRVAGISSSC*LRSICA
Trigger: GGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAAT...TCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGTGGTCTTGGCCTTTaGCTGGGCTGCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSCGLGL*LGCCLH
Trigger: ATGAAGACAGCAGCCCAGGCAAAGGCCAAGACCACA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTAAGGGTGCTCAGCTTTaGTCAGGCCCTGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPAKGAQL*SGPASL
Trigger: GAGGGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTT...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACTGCCTCAGCTTAGCTaGCTCTATCTTGAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLPQLS*LYLELA
Trigger: AGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGCAGACGGAATTCGTaGTCCCTCTTCCGCATTTTC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPCRRNS*SLFRIF
Trigger: GAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAATGCAGACGGAATTCGTaGTCCCTCTTCCGCATTTTC +
Preference number: 4 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQCRRNS*SLFRIF
Trigger: GAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCA...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCTCATGTTGTCAGCCTaGAGACGGAATTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGLMLSA*RRNSCS
Trigger: GGAGCACGAATTCCGTCTGCAGGCTGACAACATGAG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACTCATGTTGTCAGCCTaGAGACGGAATTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLMLSA*RRNSCS
Trigger: GGAGCACGAATTCCGTCTGCAGGCTGACAACATGAG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGGGACAAGGCTGTGTTaGTCATGTTGTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSGTRLC*SCCQPA
Trigger: TGCAGGCTGACAACATGAGCAACACAGCCTTGTCCC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGGGACAAGGCTGTGTTaGTCATGTTGTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGGTRLC*SCCQPA
Trigger: TGCAGGCTGACAACATGAGCAACACAGCCTTGTCCC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TTTAACCTTAAGCTCCCGGGACAAGGCTGTGTTGCTCATGTTGTCAGCCTGCAGGGCGTTGGTGGCCTCTaGCCTCTGCAGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FNLKLPGQGCVAHVVSLQGVGGL*PLQTLC
Trigger: GCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCC...CTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGTTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTACCTTTCAATGTCCTaGTGGGATCGGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGYLSMS*WDRATC
Trigger: ACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGCCGCTGGATCTCACTaGATGGAAAGTCTTTACTTA +
Preference number: 4 (lower is better)
Translates to: ATLAEHRQGRFLWQEPRRAAGSH*MESLYL
Trigger: TAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGC...CCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAATTTCTTTCCTCATCTaGGCAATCGCGTTTCGCAAG +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRISFLI*AIAFRK
Trigger: CTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAAT...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GTGAAGCGTTTCACTGAAGAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCAACCTCCACATGTCCTaGAGGGTGCCACTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VKRFTEELWPASPGKEGANLHMS*RVPLAK
Trigger: CTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTT...GGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR CCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTGGAGTTGAGTCACCCTaGGAGGTGACACCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPAGVESP*EVTPEG
Trigger: CCCTTCTGGTGTCACCTCCCAGGGTGACTCAACTCC...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCCGCCATGCCAGGCCTTaGATTTCTGTAGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASRHARP*ISVAAV
Trigger: AACTGCAGCTACAGAAATCCAAGGCCTGGCATGGCG...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGTCATACTGTTCCCGGTaGTGGTCAATCTCACCATTC +
Preference number: 4 (lower is better)
Translates to: SNAGRAQARTVSVAGTSASYCSR*WSISPF
Trigger: GAATGGTGAGATTGACCACCACCGGGAACAGTATGA...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCACGAAGTTGGTCAATaGCAGCGTCCTTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGHEVGQ*QRPSPW
Trigger: CCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp TCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGAGGGCCTCTGACTTTTaGATCTGGTCCCTTTCAATG +
Preference number: 4 (lower is better)
Translates to: SLQPSSHLSSQGIQTATLRASDF*IWSLSM
Trigger: CATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCT...CAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp TTCACTGAAGAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTTGTGTCTGTGGGGAGTaGGCGCGTGCTCACACTCTT +
Preference number: 4 (lower is better)
Translates to: FTEELWPASPGKEGASLSCVCGE*ARAHTL
Trigger: AAGAGTGTGAGCACGCGCCCACTCCCCACAGACACA...AGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTTCAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTTCTTTCTGCCGAGGTaGTTTACAGGTCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGFFLPR*FTGHRV
Trigger: CACACGGTGACCTGTAAATCACCTCGGCAGAAAGAA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCCTGGCTGTCACTGGGTaGCATCCTTCCAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASLAVTG*HPSKRK
Trigger: CTTTCTTTTGGAAGGATGTCACCCAGTGACAGCCAG...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR TCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGGGGGCACGTGCCACTaGCCGGAGGTGCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHGGTCH*PEVQEK
Trigger: CTTTTCCTGCACCTCCGGTCAGTGGCACGTGCCCCC...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGGCGGCAGGACTGCTTaGGCCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHGGRTA*AQEFET
Trigger: GGTCTCGAACTCCTGGGCTCAAGCAGTCCTGCCGCC...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCAAAATGTCACCAGCGTaGCCTGCTCTCTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASKMSPA*PALSVT
Trigger: TGTGACTGAGAGAGCAGGTCACGCTGGTGACATTTT...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGAGGCAGATTTTACAGTTaGTGCATCTTCACGAAGTTG +
Preference number: 4 (lower is better)
Translates to: EHRQGRFLWQEPRRVAGGGRFYS*CIFTKL
Trigger: CAACTTCGTGAAGATGCATCAACTGTAAAATCTGCC...TCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAAGCTTGGCAGCAACCTaGCTTTTTGCCATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSLAAT*LFAMLR
Trigger: TCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp TTCACTGAAGAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTAGTGAAGCGTTTCACTaGAGAACTGTGGCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: FTEELWPASPGKEGASLSSEAFH*RTVAGV
Trigger: GACGCCGGCCACAGTTCTTCAGTGAAACGCTTCACT...AGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTTCAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR TCA 90 bp GTGAAGCGTTTCACTGAAGAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCGCTGGGAGCTCTCTATaGCCAGAGAGTGAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: VKRFTEELWPASPGKEGAAGSSL*PESEAF
Trigger: AAACGCTTCACTCTCTGGTCATAGAGAGCTCCCAGC...GGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR GCA 90 bp CGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGGGATCTCGGTCTTGTTTTTCTCTGGAGTCGGTaGATAGATAAGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RDLGLVQGLGLVGDLGLVFLWSR*IDKVWG
Trigger: CCCCCAGACCTTATCTATGCACCGACTCCAGAGAAA...AACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTGATTCTGCCCTGAAATaGCGGCTCCTTCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPADSALK*RLLLCP
Trigger: GGGACACAGAAGGAGCCGGCATTTCAGGGCAGAATC...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCGGTCGAGCTCCTCATaGTTCCTCTTAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRSSSS*FLLNVS
Trigger: GGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGCCAGGGACAGCTGTTaGTTGTACCTTTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGARDSC*LYLSMS
Trigger: GGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACCTGACTTTTTGCCATaGTCAGACCCTGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSPDFLP*SDPESG
Trigger: CCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCGAGGAGCTGTGGGATTaGCGACCATGCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCEELWD*RPCSSG
Trigger: CCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTC...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GCTCTCTATGACCAGAGAGTGAAGCGTTTCACTGAAGAACTGTGGCCGGCGTCTAAGGAGGAGGAGCTGTaGGATTGGCGACCATGCTCC +
Preference number: 4 (lower is better)
Translates to: ALYDQRVKRFTEELWPASKEEEL*DWRPCS
Trigger: GGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTT...AGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCACTCTCTGGTCATAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR CCA 90 bp GCTCTCTATGACCAGAGAGTGAAGCGTTTCACTGAAGAACTGTGGCCGGCGTCTGGAGTTGAGTCACCCTaGGAGGTGACACCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: ALYDQRVKRFTEELWPASGVESP*EVTPEG
Trigger: CCCTTCTGGTGTCACCTCCCAGGGTGACTCAACTCC...AGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCACTCTCTGGTCATAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR CCA 90 bp TGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCGATCCAAAGGCCTCCTaGGCTCCTCGCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CHDRVRGLEVVHLTCSFLDPKAS*APRLAS
Trigger: GGAAGCCAGGCGAGGAGCCCAGGAGGCCTTTGGATC...GAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCGGGGACCCATCCCCCTaGCTGGAGCTTCAGTATGTC +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCGDPSP*LELQYV
Trigger: GACATACTGAAGCTCCAGCCAGGGGGATGGGTCCCC...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCCCTGTTCCCACGGTGTaGCTCCTCCTGAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCPVPTV*LLLSLH
Trigger: GTGGAGACTCAGGAGGAGCCACACCGTGGGAACAGG...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAATACTGTTCCCGGTGGTaGTCAATCTCACCATTCTTG +
Preference number: 4 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQYCSRW*SISPFL
Trigger: CAAGAATGGTGAGATTGACCACCACCGGGAACAGTA...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAACCTCTTCCTTCTTCCTaGTTAGCTGCACAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQPLPSS*LAAQSE
Trigger: TTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGAGG...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCCTCTTCCTTCTTCCTaGTTAGCTGCACAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPPLPSS*LAAQSE
Trigger: TTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGAGG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCATCTTCACGAAGTTaGTCAATGGCAGCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSASSRS*SMAASF
Trigger: GAAGGACGCTGCCATTGACCAACTTCGTGAAGATGC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTAGGGCCTCTGACTTTTaGATCTGGTCCCTTTCAATG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRASDF*IWSLSM
Trigger: CATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACTGTCTCCTGCAGCTTaGCAGCAACCTGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLSPAA*QQPDFL
Trigger: CAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCTGTCTCCTGCAGCTTaGCAGCAACCTGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGLSPAA*QQPDFL
Trigger: CAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
3UTR CAA 72 bp TCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTaGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: SGISDSSRVSVL*GISVLFDQLSN
Trigger: ATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CAA 72 bp ACCTTAAGCTCCCGGGACAAGGCTGTGTTGCTCATGTaGTCAGCCTGCAGACGGAATTCGTGCTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TLSSRDKAVLLM*SACRRNSCSLF
Trigger: GAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR TCA 90 bp CTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACACTGAATGTCCACAGTaGTCACTGGGGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: LAGASVCHDRVRGLEVVHTECPQ*SLGTHP
Trigger: GGGATGGGTCCCCAGTGATCACTGTGGACATTCAGT...GTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATACTCCTGGCCTCAGGTaGTCTGCCCACCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHTPGLR*SAHLGF
Trigger: GAAGCCGAGGTGGGCAGATCACCTGAGGCCAGGAGT...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp CCTTCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGGTTAGCTGCACAGAGTaGAGTTTATCCTCTAAATCC +
Preference number: 4 (lower is better)
Translates to: PSLQPSSHLSSQGIQTATVSCTE*SLSSKS
Trigger: GGATTTAGAGGATAAACTTCACTCTGTGCAGCTAAC...CGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR TCA 90 bp AAGAACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCTCTATGACCAGAGAGTaGAGCGTTTCACTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: KNCGRRLQERKEPRFLQGSMTRE*SVSLKN
Trigger: GTTCTTCAGTGAAACGCTTCACTCTCTGGTCATAGA...GCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR GCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCCCCGAGCTTCCTGAGTaGCAGTCCAGAGGATACTGG +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCPELPE*QSRGYW
Trigger: CCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGG...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR GCA 90 bp TGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCCCAGCTCAGCCACCTaGTTCCGCAGCTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: CHDRVRGLEVVHLTCSFLPSSAT*FRSSKT
Trigger: GGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGG...GAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGACCTGTCTTCTTTCTaGCGAGGTGATTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSDLSSF*RGDLQV
Trigger: GACCTGTAAATCACCTCGGCAGAAAGAAGACAGGTC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp ATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCTTGGGATTGGCGACCATaGTCCTCAGGGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: MTVCEVWKLFTLHAPFSSWDWRP*SSGCWG
Trigger: TCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCA...AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTGGGTCGGCCCAGCTCTaGACGGAGCCTGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIGSAQL*TEPVPH
Trigger: ATGGGGAACAGGCTCCGTGCAGAGCTGGGCCGACCC...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACGTCACCAGCGTGACCTaGTCTCTCAGTCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: LAGASVCHDRVRGLEVVHVTSVT*SLSHSL
Trigger: CAAGCTGTGACTGAGAGAGCAGGTCACGCTGGTGAC...GTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTCTGCTTCCCTCCCTGTaGCGGCAGCCCAGAAACGGC +
Preference number: 4 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFLLPSL*RQPRNG
Trigger: GCCGTTTCTGGGCTGCCGGCACAGGGAGGGAAGCAG...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTGCTTTGCTCAGGCCCTaGTTCCCTCCCTGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFALLRP*FPPCAG
Trigger: GCCGGCACAGGGAGGGAAGCAGGGCCTGAGCAAAGC...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGCCTCCAGCTCTTTGTaGAGTAGTTTAACCTTAAGC +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPASSSL*SSLTLS
Trigger: GCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAAGCCTCCAGCTCTTTGTaGAGTAGTTTAACCTTAAGC +
Preference number: 4 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQASSSL*SSLTLS
Trigger: GCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGC...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACGGTCGAGCTCCTCATaGTTCCTCTTAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSRSSSS*FLLNVS
Trigger: GGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGCCGCTGGATCTCACTaGATGGAAAGTCTTTACTTA +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPAAGSH*MESLYL
Trigger: TAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTATTTCTTTCCTCATCTaGGCAATCGCGTTTCGCAAG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPISFLI*AIAFRK
Trigger: CTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAAT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATTACAGGTCACCGTGTaGATGCTGTGTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLQVTV*MLCCVF
Trigger: GAAGACACAACACAGCATCCACACGGTGACCTGTAA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGATCCAAAGGCCTCCTaGGCTCCTCGCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHDPKAS*APRLAS
Trigger: GGAAGCCAGGCGAGGAGCCCAGGAGGCCTTTGGATC...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACGGGGACCCATCCCCCTaGCTGGAGCTTCAGTATGTC +
Preference number: 4 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANGDPSP*LELQYV
Trigger: GACATACTGAAGCTCCAGCCAGGGGGATGGGTCCCC...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATACTGTTCCCGGTGGTaGTCAATCTCACCATTCTTG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSYCSRW*SISPFL
Trigger: CAAGAATGGTGAGATTGACCACCACCGGGAACAGTA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCATACTGTTCCCGGTaGTGGTCAATCTCACCATTC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSYCSR*WSISPF
Trigger: GAATGGTGAGATTGACCACCACCGGGAACAGTATGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACCTCTTCCTTCTTCCTaGTTAGCTGCACAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSPLPSS*LAAQSE
Trigger: TTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGAGG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGATCTGACTTTTGGATCTaGTCCCTTTCAATGTCATCA +
Preference number: 4 (lower is better)
Translates to: EHRQGRFLWQEPRRVAGGSDFWI*SLSMSS
Trigger: TGATGACATTGAAAGGGACCAGATCCAAAAGTCAGA...TCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAGGGCCTCTGACTTTTaGATCTGGTCCCTTTCAATG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGRASDF*IWSLSM
Trigger: CATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTACTCCTGGCCTCAGGTaGTCTGCCCACCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: YTCTGWSSVQTQENPVQITPGLR*SAHLGF
Trigger: GAAGCCGAGGTGGGCAGATCACCTGAGGCCAGGAGT...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGGCAGATTTTACAGTTaGTGCATCTTCACGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPGRFYS*CIFTKL
Trigger: CAACTTCGTGAAGATGCATCAACTGTAAAATCTGCC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp GAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGAGGAAGAGGAAAAACAGTTTaGGTTTTCCAGAAATACCCT +
Preference number: 4 (lower is better)
Translates to: EHRQGRFLWQEPRRVAGGRGKTV*VFQKYP
Trigger: AGGGTATTTCTGGAAAACTCAAACTGTTTTTCCTCT...TCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAATTTCTTCTTCATGCTaGCTGAGAAGCATCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSISSSC*LRSICA
Trigger: GGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAAT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGCTTATTTCTTCTTCATaGTGCCTGAGAAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: SNAGRAQARTVSVAGTSALISSS*CLRSIC
Trigger: ACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAG...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR GCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATTGGGATTGGCGACCATaGTCCTCAGGGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHWDWRP*SSGCWG
Trigger: TCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCA...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GCTCTCTATGACCAGAGAGTGAAGCGTTTCACTGAAGAACTGTGGCCGGCGTCTTGTGGTCTTGGCCTTTaGCTGGGCTGCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ALYDQRVKRFTEELWPASCGLGL*LGCCLH
Trigger: ATGAAGACAGCAGCCCAGGCAAAGGCCAAGACCACA...AGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCACTCTCTGGTCATAGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR GCA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTGGAGGGAGGGCGTGGTaGAACAGCCACCTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFGGRAW*NSHLSG
Trigger: ACCCGAAAGGTGGCTGTTGCACCACGCCCTCCCTCC...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTTCTGGAGCTCTTTTCTaGAGTTTCCTCCTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPASGALF*SFLLAG
Trigger: TCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCCAGA...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCCTCCTTTCTCCTCTTTaGCTGGCTTTGTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASLLSPL*LALWSF
Trigger: AAAACTCCACAAAGCCAGGCAAAGAGGAGAAAGGAG...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGGGATCTCGGTCTTGTTCTCCTTTCTCCTCTTTaGCTGGCTTTGTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: RDLGLVQGLGLVGDLGLVLLSPL*LALWSF
Trigger: AAAACTCCACAAAGCCAGGCAAAGAGGAGAAAGGAG...AACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCAGGCGTGAGCCGCCATaGCAGGCCTTGGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: CHDRVRGLEVVHLTCSFLRREPP*QALDFC
Trigger: ACAGAAATCCAAGGCCTGGCATGGCGGCTCACGCCT...GAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCCTCCAGCTCTTTGTaGAGTAGTTTAACCTTAAGC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSASSSL*SSLTLS
Trigger: GCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGACTGGATCTCACTGGATaGAAAGTCTTTACTTATTTC +
Preference number: 4 (lower is better)
Translates to: AALVPPELPGHTDSNAGRLDLTG*KVFTYF
Trigger: GAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAG...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCCGCTGGATCTCACTaGATGGAAAGTCTTTACTTA +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSAAGSH*MESLYL
Trigger: TAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGATTTCTTTCCTCATCTaGGCAATCGCGTTTCGCAAG +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGISFLI*AIAFRK
Trigger: CTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAAT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp TGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCAAGGAGGAGGAGCTGTaGGATTGGCGACCATGCTCC +
Preference number: 4 (lower is better)
Translates to: CHDRVRGLEVVHLTCSFLKEEEL*DWRPCS
Trigger: GGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTT...GAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCAACCTCCACATGTCCTaGAGGGTGCCACTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCNLHMS*RVPLAK
Trigger: CTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTT...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp ATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCTCCCTTCCAACAAGGGTaGCGGTCTTGTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: MTVCEVWKLFTLHAPFSSPFQQG*RSCPGS
Trigger: AGATCCCGGACAAGACCGCCACCCTTGTTGGAAGGG...AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATCCTGTTCCCACGGTGTaGCTCCTCCTGAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHPVPTV*LLLSLH
Trigger: GTGGAGACTCAGGAGGAGCCACACCGTGGGAACAGG...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GCTCTCTATGACCAGAGAGTGAAGCGTTTCACTGAAGAACTGTGGCCGGCGTCTTTCACTGAAGAACTGTaGCCGGCGTCTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALYDQRVKRFTEELWPASFTEEL*PASPGK
Trigger: CTTTCCTGGAGACGCCGGCCACAGTTCTTCAGTGAA...AGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCACTCTCTGGTCATAGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR TCA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTTTTGTGTCTTTCAAGTaGACACAAGGAGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVFVSFK*TQGESE
Trigger: CTCAGATTCTCCTTGTGTTCACTTGAAAGACACAAA...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR TCA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTGGCCAGAAGCAGAAGTaGGTGCCAGCCGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFGQKQK*VPAVVW
Trigger: CCACACAACGGCTGGCACTCACTTCTGCTTCTGGCC...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCAGCTTCAGTATGTCATaGCCGTGTGCGAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCSFSMS*PCARSG
Trigger: TCCAGACCTCGCACACGGTCATGACATACTGAAGCT...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACACTGAATGTCCACAGTaGTCACTGGGGACCCATCCC +
Preference number: 4 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANTECPQ*SLGTHP
Trigger: GGGATGGGTCCCCAGTGATCACTGTGGACATTCAGT...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGTTAGCTGCACAGAGTaGAGTTTATCCTCTAAATCC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGVSCTE*SLSSKS
Trigger: GGATTTAGAGGATAAACTTCACTCTGTGCAGCTAAC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGTTAGCTGCACAGAGTaGAGTTTATCCTCTAAATCC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSVSCTE*SLSSKS
Trigger: GGATTTAGAGGATAAACTTCACTCTGTGCAGCTAAC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGGCAGATTTTACAGTTaGTGCATCTTCACGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSGRFYS*CIFTKL
Trigger: CAACTTCGTGAAGATGCATCAACTGTAAAATCTGCC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCTTATTTCTTCTTCATaGTGCCTGAGAAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPLISSS*CLRSIC
Trigger: ACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp TTTCTAGTTGTTCATGGAGGAACATTAAAGTCTGGTCCTTGTAACTACGGCCTGGGGCGTCAAGTCTGCTaGCCACCTGTGCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: FLVVHGGTLKSGPCNYGLGRQVC*PPVLSG
Trigger: CCCGCTCAGCACAGGTGGGCAGCAGACTTGACGCCC...CAGGCCGTAGTTACAAGGACCAGACTTTAATGTTCCTCCATGAACAACTAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTGACCTGTCTTCTTTCTaGCGAGGTGATTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPADLSSF*RGDLQV
Trigger: GACCTGTAAATCACCTCGGCAGAAAGAAGACAGGTC...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTCCTCCCCGCCATCCCTaGCTTCTGGTCATCTATGCC +
Preference number: 4 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIPPRHP*LLVIYA
Trigger: GGCATAGATGACCAGAAGGCAGGGATGGCGGGGAGG...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR GCA 90 bp TGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCGCGCTGCATGTTTTTaGACACTGAGGAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CHDRVRGLEVVHLTCSFLRAACF*TLRSCL
Trigger: GAGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCG...GAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCGGTGCTGTGGGGCTGTaGATCCAGCCTCATAAAATG +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCGAVGL*IQPHKM
Trigger: CATTTTATGAGGCTGGATGCACAGCCCCACAGCACC...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp ATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCTGCTTCAGTGACAAGGTaGTGTGGGGCTGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: MTVCEVWKLFTLHAPFSSASVTR*CGAVHP
Trigger: TGGATGCACAGCCCCACAGCACCTTGTCACTGAAGC...AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCCGGGACAAGGCTGTGTTGCTCATGTTGTCAGCCTGCAGACGGAATTCGTGCTGCCTCCAGCTCTTTGTaGAGTAGTTTAACCTTAAGC +
Preference number: 4 (lower is better)
Translates to: PGTRLCCSCCQPADGIRAASSSL*SSLTLS
Trigger: GCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGC...AGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CCA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTACCTCCAGGTGTACCTaGTCCACCTCACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFTSRCT*STSRGS
Trigger: GCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGT...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR CCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTTTACAGGTCACCGTGTaGATGCTGTGTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPALQVTV*MLCCVF
Trigger: GAAGACACAACACAGCATCCACACGGTGACCTGTAA...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACACTGCTGGCTGTCACTaGGTGACATCCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LAGASVCHDRVRGLEVVHTAGCH*VTSFQK
Trigger: CTTTTGGAAGGATGTCACCCAGTGACAGCCAGCAGT...GTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR CCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTAGGAAAAGCTCCCCCTaGTCCTCGGCCTCCATAGGC +
Preference number: 4 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIRKSSP*SSASIG
Trigger: GCCTATGGAGGCCGAGGACCAGGGGGAGCTTTTCCT...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACTGCATAGATAAGGTCTaGGGGGCACGTGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANCIDKV*GARATD
Trigger: GTCAGTGGCACGTGCCCCCCAGACCTTATCTATGCA...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp TGTGGAGTTTTCTTCTATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGGCAGGAGGGAGGGCGTaGTGCAACAGCCACCTTTCG +
Preference number: 4 (lower is better)
Translates to: CGVFFYTCTGWSSVQTQEAGGRA*CNSHLS
Trigger: CGAAAGGTGGCTGTTGCACCACGCCCTCCCTCCTGC...CTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATAGAAGAAAACTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACGCTTTCCCAAGTGTCTaGAAGGAGCCTCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANAFPSV*KEPHPR
Trigger: CCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGC...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTCTTTGCCTGGCTTTGTaGAGTTTTCTTCTATACATG +
Preference number: 4 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVLCLAL*SFLLYM
Trigger: CATGTATAGAAGAAAACTCCACAAAGCCAGGCAAAG...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCTTTCTCCTCTTTGCCTaGCTTTGTGGAGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASFLLFA*LCGVFF
Trigger: GAAGAAAACTCCACAAAGCCAGGCAAAGAGGAGAAA...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTACCGTGTGCGAGGTCTaGAAGTTGTTCACCTTACAT +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPATVCEV*KLFTLH
Trigger: ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGT...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTGTCCACAGTGATCACTaGGGACCCATCCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIVHSDH*GPIPLA
Trigger: AGCCAGGGGGATGGGTCCCCAGTGATCACTGTGGAC...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTCTGACTTTTGGATCTaGTCCCTTTCAATGTCATCA +
Preference number: 4 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSDFWI*SLSMSS
Trigger: TGATGACATTGAAAGGGACCAGATCCAAAAGTCAGA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR TCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCTTCTTTCTGCCGAGGTaGTTTACAGGTCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCFFLPR*FTGHRV
Trigger: CACACGGTGACCTGTAAATCACCTCGGCAGAAAGAA...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATTGTTCCCCATCTCGATaGGCTGCTCTTTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHCSPSR*AALSPG
Trigger: GCCTGGAGAAAGAGCAGCTCATCGAGATGGGGAACA...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCTTATTTCTTCTTCATaGTGCCTGAGAAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGLISSS*CLRSIC
Trigger: ACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR GCA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCCTGGGGGCTGCTTCCTaGCTGAAGGCTCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GFVTTISRKELTDIYLTILGAAS*LKAPLP
Trigger: GGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAG...GATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR GCA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCGGAGGACGCCAGGGGTaGCCACCCAAGGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SGSHGFVTTISRKELTDIGGRQG*PPKEPL
Trigger: AAGAGGCTCCTTGGGTGGGCACCCCTGGCGTCCTCC...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR GCA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACGATGTAAAATGGGGCTaGACCTGTCCCAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANDVKWG*TCPKGG
Trigger: CCCACCTTTGGGACAGGTGCAGCCCCATTTTACATC...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCGGTGCTGTGGGGCTGTaGATCCAGCCTCATAAAATG +
Preference number: 4 (lower is better)
Translates to: CHDRVRGLEVVHLTCSFLGAVGL*IQPHKM
Trigger: CATTTTATGAGGCTGGATGCACAGCCCCACAGCACC...GAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCAGAAGCAGAAGTGAGTaGCAGCCGTTGTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: CHDRVRGLEVVHLTCSFLRSRSE*QPLCGH
Trigger: ATGCCCACACAACGGCTGGCACTCACTTCTGCTTCT...GAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTCTCAAGAGAACCCTGTaGAGATTTCTGGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GALFCSFLLAGFCPEMPALKRTL*RFLELF
Trigger: AAAGAGCTCCAGAAATCTGCACAGGGTTCTCTTGAG...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TCTTCCTGGTTAGCTGCACAGAGTGAAGTTTATCCTCTAAATCCTTTACCCGGGACTCTCTGCAGCCTTTaGCCCGGCTTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SSWLAAQSEVYPLNPLPGTLCSL*PGFLQS
Trigger: GCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGT...CCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR GCA 90 bp GCTCATGTTGTCAGCCTGCAGACGGAATTCGTGCTCCCTCTTCCGCATTTTCGACGGTCGAGCTCCTCATaGTTCCTCTTAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: AHVVSLQTEFVLPLPHFRRSSSS*FLLNVS
Trigger: GGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCG...TCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CCA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCACGCCAGGCTGGGCGTaGGGCCCACACCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: SGSHGFVTTISRKELTDITPGWA*GPHLSS
Trigger: AGATGACAGGTGTGGGCCCCACGCCCAGCCTGGCGT...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp TGTGGAGTTTTCTTCTATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGCAGGCTAGAGTGCAGTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CGVFFYTCTGWSSVQTQEQARVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACTGCACTCTAGCCTG...CTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATAGAAGAAAACTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCTGACTTTTGGATCTaGTCCCTTTCAATGTCATCA +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSDFWI*SLSMSS
Trigger: TGATGACATTGAAAGGGACCAGATCCAAAAGTCAGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
3UTR CAA 72 bp TCGTCCAGGGTCTCGGTCTTGTTGGGGATCTCGGTCTaGTTTGACCAGTTGTCCAATGTCTGCAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: SSRVSVLLGISV*FDQLSNVCKQL
Trigger: CAACTGTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCGAGACCCTGGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CAA 72 bp AGTAGTTTAACCTTAAGCTCCCGGGACAAGGCTGTGTaGCTCATGTTGTCAGCCTGCAGACGGAATTCGTGC +
Preference number: 4 (lower is better)
Translates to: SSLTLSSRDKAV*LMLSACRRNSC
Trigger: GCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR TCA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACAACACAAGGAGAATCTaGGGACACCCAACCAGCACA +
Preference number: 4 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANNTRRI*GHPTST
Trigger: TGTGCTGGTTGGGTGTCCTCAGATTCTCCTTGTGTT...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR TCA 90 bp TGTGGAGTTTTCTTCTATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGACAGCAGGACTGTCCTaGTCCCACTGCAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CGVFFYTCTGWSSVQTQETAGLS*SHCKAA
Trigger: AGCAGCCTTGCAGTGGGATCAGGACAGTCCTGCTGT...CTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATAGAAGAAAACTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp TGTGGAGTTTTCTTCTATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGTGCGGGATTCTGCCCTaGAATGCCGGCTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CGVFFYTCTGWSSVQTQECGILP*NAGSFC
Trigger: ACAGAAGGAGCCGGCATTTCAGGGCAGAATCCCGCA...CTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATAGAAGAAAACTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp ATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCTCTCCTGAGTCTCCACTaGATGTCCACAGTGATCACT +
Preference number: 4 (lower is better)
Translates to: MTVCEVWKLFTLHAPFSSLLSLH*MSTVIT
Trigger: AGTGATCACTGTGGACATTCAGTGGAGACTCAGGAG...AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTAGGTCACCGTGTGGATaGTGTGTTGTGTCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIRSPCG*CVVSSG
Trigger: GCCCGAAGACACAACACAGCATCCACACGGTGACCT...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TGTGGAGTTTTCTTCTATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGCCCATCTCGATGAGCTaGTCTTTCTCCAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: CGVFFYTCTGWSSVQTQEPISMS*SFSRRR
Trigger: CCTCCGCCTGGAGAAAGAGCAGCTCATCGAGATGGG...CTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATAGAAGAAAACTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGAGGAGGGAGGGCGTGGTaGAACAGCCACCTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: PKWQSWFRHYNFKKRANRGGRAW*NSHLSG
Trigger: ACCCGAAAGGTGGCTGTTGCACCACGCCCTCCCTCC...TCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGAGGCTGGGGTTGTCCGTaGCATTCAGGGCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: PKWQSWFRHYNFKKRANRGWGCP*HSGHPS
Trigger: ACTGGGGTGCCCTGAATGGCACGGACAACCCCAGCC...TCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCTGGATCTCACTGGATaGAAAGTCTTTACTTATTTC +
Preference number: 4 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGLDLTG*KVFTYF
Trigger: GAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACTGGATCTCACTGGATaGAAAGTCTTTACTTATTTC +
Preference number: 4 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLDLTG*KVFTYF
Trigger: GAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CCA 90 bp TTTCTAGTTGTTCATGGAGGAACATTAAAGTCTGGTCCTTGTAACTACGGCCTGTCCGCTCCCCCGTGCTaGGCTATCCTGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: FLVVHGGTLKSGPCNYGLSAPPC*AILRCF
Trigger: GAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGA...CAGGCCGTAGTTACAAGGACCAGACTTTAATGTTCCTCCATGAACAACTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR CCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTAACCTCCACATGTCCTaGAGGGTGCCACTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: YTCTGWSSVQTQENPVQINLHMS*RVPLAK
Trigger: CTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTT...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTTCTTGGCCAGAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCCAGAGCACTGGTTCTTaGATTCCTGTAGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LLGQSTGSWIPVASVTRCQSTGS*IPVASV
Trigger: CACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTG...GCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTCTGGCCAAGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp TTTAACCTTAAGCTCCCGGGACAAGGCTGTGTTGCTCATGTTGTCAGCCTGCAGTACTGTTCCCGGTGGTaGTCAATCTCACCATTCTTG +
Preference number: 4 (lower is better)
Translates to: FNLKLPGQGCVAHVVSLQYCSRW*SISPFL
Trigger: CAAGAATGGTGAGATTGACCACCACCGGGAACAGTA...CTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CCA 90 bp TTTAACCTTAAGCTCCCGGGACAAGGCTGTGTTGCTCATGTTGTCAGCCTGCAGCCTCTTCCTTCTTCCTaGTTAGCTGCACAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: FNLKLPGQGCVAHVVSLQPLPSS*LAAQSE
Trigger: TTCACTCTGTGCAGCTAACCAGGAAGAAGGAAGAGG...CTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR TCA 90 bp CCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACGTGCTGGGCTATCCTaGGATGCTTCCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PKWQSWFRHYNFKKRANRRAGLS*DASPAQ
Trigger: CTGAGCTGGGGAAGCATCTCAGGATAGCCCAGCACG...TCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR TCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGAGGCAGACACCCCTGTaGGGCTGCCCTCATGGGAGG +
Preference number: 4 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLRQTPL*GCPHGR
Trigger: CCTCCCATGAGGGCAGCCTCACAGGGGTGTCTGCCT...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR TCA 90 bp TGTGGAGTTTTCTTCTATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGTGTTCCCCATCTCGATaGGCTGCTCTTTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CGVFFYTCTGWSSVQTQECSPSR*AALSPG
Trigger: GCCTGGAGAAAGAGCAGCTCATCGAGATGGGGAACA...CTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATAGAAGAAAACTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp TGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCATGTTTTTGCACACTaGGGAGCTGCCTCCATTCAT +
Preference number: 4 (lower is better)
Translates to: CHDRVRGLEVVHLTCSFLHVFAH*GAASIH
Trigger: ATGAATGGAGGCAGCTCCTCAGTGTGCAAAAACATG...GAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACCATGTTTTTGCACACTaGGGAGCTGCCTCCATTCAT +
Preference number: 4 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANHVFAH*GAASIH
Trigger: ATGAATGGAGGCAGCTCCTCAGTGTGCAAAAACATG...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATCTCCTGAGTCTCCACTaGATGTCCACAGTGATCACT +
Preference number: 4 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHLLSLH*MSTVIT
Trigger: AGTGATCACTGTGGACATTCAGTGGAGACTCAGGAG...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GCTCTCTATGACCAGAGAGTGAAGCGTTTCACTGAAGAACTGTGGCCGGCGTCTTCCTTTAGGACAGAATaGAGTTCTGGAGTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: ALYDQRVKRFTEELWPASSFRTE*SSGVES
Trigger: TGACTCAACTCCAGAACTTCATTCTGTCCTAAAGGA...AGACGCCGGCCACAGTTCTTCAGTGAAACGCTTCACTCTCTGGTCATAGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR GCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGGCTCCGCTCCCCCGTaGTGGGCTATCCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKGSAPP*WAILRC
Trigger: GCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCC...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR GCA 90 bp TGTGGAGTTTTCTTCTATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAGTCGCTGCTCCCAGTaGTTCAGTGGGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: CGVFFYTCTGWSSVQTQESRCSQ*FSGFLL
Trigger: GAGAAGGAACCCACTGAAGCACTGGGAGCAGCGACT...CTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATAGAAGAAAACTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR CCA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACTTACAGGTCACCGTGTaGATGCTGTGTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANLQVTV*MLCCVF
Trigger: GAAGACACAACACAGCATCCACACGGTGACCTGTAA...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCTTTTCTAGTTGTTCATaGAGGAACATTAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASFSSCS*RNIKVW
Trigger: CCAGACTTTAATGTTCCTCCATGAACAACTAGAAAA...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
3UTR CAA 72 bp CTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTaGTTCACCTTACATGCTCCTTTCTCCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LQYVMTVCEVWK*FTLHAPFSSLP
Trigger: AGGCAAAGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGACAGACCCTCCGGCTTaGCCAGCTTGGGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLTDPPA*PAWADP
Trigger: AGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGT...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR TCA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCACAGCAGGACTGTCCTaGTCCCACTGCAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SGSHGFVTTISRKELTDITAGLS*SHCKAA
Trigger: AGCAGCCTTGCAGTGGGATCAGGACAGTCCTGCTGT...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTAAAATGTCACCAGCGTaGCCTGCTCTCTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIKMSPA*PALSVT
Trigger: TGTGACTGAGAGAGCAGGTCACGCTGGTGACATTTT...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp AGAAGCAGAAGTGAGTGCCAGCCGTTGTGTGGGCATAGAATAAATATTATCAGAAGCAGGTTTAGGAGCTaGACTCTGTCCCCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RSRSECQPLCGHRINIIRSRFRS*TLSPSF
Trigger: GAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCT...TCTGATAATATTTATTCTATGCCCACACAACGGCTGGCACTCACTTCTGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR GCA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCACATGTCCTGGAGGGTaGCACTGGCAAAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SGSHGFVTTISRKELTDITCPGG*HWQRRR
Trigger: CCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGT...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp AGAAGCAGAAGTGAGTGCCAGCCGTTGTGTGGGCATAGAATAAATATTATCAGATGCACACTGAGGAGCTaGCTCCATTCATTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: RSRSECQPLCGHRINIIRCTLRS*LHSFPL
Trigger: GAGGGGGAATGAATGGAGGCAGCTCCTCAGTGTGCA...TCTGATAATATTTATTCTATGCCCACACAACGGCTGGCACTCACTTCTGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATTATGTCATGACCGTGTaGGAGGTCTGGAAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHYVMTV*EVWKLF
Trigger: GAACAACTTCCAGACCTCGCACACGGTCATGACATA...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCAAGGAGGAGGAGCTGTaGGATTGGCGACCATGCTCC +
Preference number: 4 (lower is better)
Translates to: SGSHGFVTTISRKELTDIKEEEL*DWRPCS
Trigger: GGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTT...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGAGGAGTTGAGTCACCCTaGGAGGTGACACCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PKWQSWFRHYNFKKRANRGVESP*EVTPEG
Trigger: CCCTTCTGGTGTCACCTCCCAGGGTGACTCAACTCC...TCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGGCAGGAGGGAGGGCGTaGTGCAACAGCCACCTTTCG +
Preference number: 4 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLAGGRA*CNSHLS
Trigger: CGAAAGGTGGCTGTTGCACCACGCCCTCCCTCCTGC...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCCACCTGTCCCAAAGGTaGGCTGCGATCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SGSHGFVTTISRKELTDIHLSQR*AAIQRP
Trigger: AGGCCTTTGGATCGCAGCCCACCTTTGGGACAGGTG...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTCCCCCTCGCATTCCTaGAGCCCACGTGCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: GFVTTISRKELTDIYLTISPSHS*SPRAPY
Trigger: GTAAGGAGCACGTGGGCTCCAGGAATGCGAGGGGGA...GATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACCCCTGTGCAGATTTCTaGAGCTCTTTTCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANPCADF*SSFLQF
Trigger: AAACTGCAGAAAAGAGCTCCAGAAATCTGCACAGGG...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTTGCCTGGCTTTGTaGAGTTTTCTTCTATACATG +
Preference number: 4 (lower is better)
Translates to: LAGASVCHDRVRGLEVVHLCLAL*SFLLYM
Trigger: CATGTATAGAAGAAAACTCCACAAAGCCAGGCAAAG...GTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGGTTCATGTTTGGGTaGAGGGCTCCACTCCACGCC +
Preference number: 4 (lower is better)
Translates to: GFVTTISRKELTDIYLTIWFMFG*RAPLHA
Trigger: GGCGTGGAGTGGAGCCCTTCACCCAAACATGAACCA...GATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGCGGGATTCTGCCCTaGAATGCCGGCTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GFVTTISRKELTDIYLTICGILP*NAGSFC
Trigger: ACAGAAGGAGCCGGCATTTCAGGGCAGAATCCCGCA...GATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTGACCTGTCTTCTTTCTaGCGAGGTGATTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFDLSSF*RGDLQV
Trigger: GACCTGTAAATCACCTCGGCAGAAAGAAGACAGGTC...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTTCCTGGAGCCCACGTaGTCCTTACCAAGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: GFVTTISRKELTDIYLTIFLEPT*SLPSSP
Trigger: AGGCGAGCTTGGTAAGGAGCACGTGGGCTCCAGGAA...GATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCCCCCAGGGTTCACCTTaGCTGTCTCCCTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: SGSHGFVTTISRKELTDIPQGSP*LSPFQQ
Trigger: TTGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGG...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCGATTCTGCCCTGAAATaGCGGCTCCTTCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SGSHGFVTTISRKELTDIDSALK*RLLLCP
Trigger: GGGACACAGAAGGAGCCGGCATTTCAGGGCAGAATC...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTATGTCATGACCGTGTaGGAGGTCTGGAAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIYVMTV*EVWKLF
Trigger: GAACAACTTCCAGACCTCGCACACGGTCATGACATA...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAACAGGGTGGGCACTGCTaGCTGTCACTGGGTGACATC +
Preference number: 4 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKQGGHC*LSLGDI
Trigger: GATGTCACCCAGTGACAGCCAGCAGTGCCCACCCTG...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR CCA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTACCGTGTGCGAGGTCTaGAAGTTGTTCACCTTACAT +
Preference number: 4 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFTVCEV*KLFTLH
Trigger: ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGT...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp TTTCTAGTTGTTCATGGAGGAACATTAAAGTCTGGTCCTTGTAACTACGGCCTGCGCCATGCCAGGCCTTaGATTTCTGTAGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: FLVVHGGTLKSGPCNYGLRHARP*ISVAAV
Trigger: AACTGCAGCTACAGAAATCCAAGGCCTGGCATGGCG...CAGGCCGTAGTTACAAGGACCAGACTTTAATGTTCCTCCATGAACAACTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGGCAGCACCTTCTGTCTaGGTCGTGTCACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLAAPSV*VVSPAG
Trigger: ACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGC...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR TCA 90 bp TTTCTAGTTGTTCATGGAGGAACATTAAAGTCTGGTCCTTGTAACTACGGCCTGTTCTTTCTGCCGAGGTaGTTTACAGGTCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: FLVVHGGTLKSGPCNYGLFFLPR*FTGHRV
Trigger: CACACGGTGACCTGTAAATCACCTCGGCAGAAAGAA...CAGGCCGTAGTTACAAGGACCAGACTTTAATGTTCCTCCATGAACAACTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGCCCCATTTCTGGAGTTaGGTCACCCTGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLPHFWS*VTLGGD
Trigger: GTCACCTCCCAGGGTGACTCAACTCCAGAAATGGGG...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGTGTGATGGTGACCAGTaGGGCCCGCGCTGCATGTTT +
Preference number: 4 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLCDGDQ*GPRCMF
Trigger: AAACATGCAGCGCGGGCCTCACTGGTCACCATCACA...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCAGCTTCAGTATGTCATaGCCGTGTGCGAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SGSHGFVTTISRKELTDISFSMS*PCARSG
Trigger: TCCAGACCTCGCACACGGTCATGACATACTGAAGCT...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp TCTTTGTGCAGTAGTTTAACCTTAAGCTCCCGGGACAAGGCTGTGTTGCTCATGGTTAGCTGCACAGAGTaGAGTTTATCCTCTAAATCC +
Preference number: 4 (lower is better)
Translates to: SLCSSLTLSSRDKAVLLMVSCTE*SLSSKS
Trigger: GGATTTAGAGGATAAACTTCACTCTGTGCAGCTAAC...CATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACTGCACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR GCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGAGGAGCCTCTTCACCTaGTCTTCCAGGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLRSLFT*SSRVGT
Trigger: AGTGCCCACCCTGGAAGAGCAGGTGAAGAGGCTCCT...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR GCA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCGCTTCAGTGACAAGGTaGTGTGGGGCTGTGCATCCA +
Preference number: 4 (lower is better)
Translates to: GFVTTISRKELTDIYLTIASVTR*CGAVHP
Trigger: TGGATGCACAGCCCCACAGCACCTTGTCACTGAAGC...GATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TTTCTAGTTGTTCATGGAGGAACATTAAAGTCTGGTCCTTGTAACTACGGCCTGTCTGGAGCTCTTTTCTaGAGTTTCCTCCTTGCGGGA +
Preference number: 4 (lower is better)
Translates to: FLVVHGGTLKSGPCNYGLSGALF*SFLLAG
Trigger: TCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCCAGA...CAGGCCGTAGTTACAAGGACCAGACTTTAATGTTCCTCCATGAACAACTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGAGGCGTGAGCCGCCATaGCAGGCCTTGGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLRREPP*QALDFC
Trigger: ACAGAAATCCAAGGCCTGGCATGGCGGCTCACGCCT...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCCAGTCCAGAGGATACTaGGCCAGCTTGGACAGATCC +
Preference number: 4 (lower is better)
Translates to: GFVTTISRKELTDIYLTIQSRGY*ASLDRS
Trigger: GGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTG...GATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR CCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAATGTGCTGAGCGGGGCTaGTGCTTTCCCAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKCAERG*CFPKCL
Trigger: CAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACA...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR TCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAACAGATCCTCCTGCTTaGCCAGCTTGGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKTDPPA*PAWTDP
Trigger: AGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGT...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR GCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGAGGTCACCGTGTGGATaGTGTGTTGTGTCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLRSPCG*CVVSSG
Trigger: GCCCGAAGACACAACACAGCATCCACACGGTGACCT...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGATTTCTCTGGAGTCGGTaGATAGATAAGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PKWQSWFRHYNFKKRANRFLWSR*IDKVWG
Trigger: CCCCCAGACCTTATCTATGCACCGACTCCAGAGAAA...TCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAATGCACACTGAGGAGCTaGCTCCATTCATTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKCTLRS*LHSFPL
Trigger: GAGGGGGAATGAATGGAGGCAGCTCCTCAGTGTGCA...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAAGCCTGGGGTGGCTTTaGGGACCTGTCTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKSLGWL*GPVFFL
Trigger: CAGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCT...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGCCAGTGCTCCCTTCTTaGCCAGAGCACTGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLPVLPS*PEHWFL
Trigger: CAAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGG...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTTTCTCCTCTTTGCCTaGCTTTGTGGAGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIFLLFA*LCGVFF
Trigger: GAAGAAAACTCCACAAAGCCAGGCAAAGAGGAGAAA...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGACAAAAAGAGTCGCTaGTCCCAGTGCTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKDKKSR*SQCFSG
Trigger: CCCACTGAAGCACTGGGAGCAGCGACTCTTTTTGTC...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR GCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGATGTAAAATGGGGCTaGACCTGTCCCAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKDVKWG*TCPKGG
Trigger: CCCACCTTTGGGACAGGTGCAGCCCCATTTTACATC...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAAGAAGCAGAAGTGAGTaGCAGCCGTTGTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKRSRSE*QPLCGH
Trigger: ATGCCCACACAACGGCTGGCACTCACTTCTGCTTCT...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp TTTCTAGTTGTTCATGGAGGAACATTAAAGTCTGGTCCTTGTAACTACGGCCTGCTCAAGAGAACCCTGTaGAGATTTCTGGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: FLVVHGGTLKSGPCNYGLLKRTL*RFLELF
Trigger: AAAGAGCTCCAGAAATCTGCACAGGGTTCTCTTGAG...CAGGCCGTAGTTACAAGGACCAGACTTTAATGTTCCTCCATGAACAACTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGATTTGAGACAGGAGTCTaGTCTGTCACTCAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: PKWQSWFRHYNFKKRANRFETGV*SVTQAR
Trigger: TCTAGCCTGAGTGACAGAGCAGACTCCTGTCTCAAA...TCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCGCCATCCCTGCCTTCTaGTCATCTATGCCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GFVTTISRKELTDIYLTIAIPAF*SSMPLC
Trigger: ACACAAAGGCATAGATGACCAGAAGGCAGGGATGGC...GATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR CCA 90 bp ATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCTTTTTCTAGTTGTTCATaGAGGAACATTAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: MTVCEVWKLFTLHAPFSSFSSCS*RNIKVW
Trigger: CCAGACTTTAATGTTCCTCCATGAACAACTAGAAAA...AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp CCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGATTGGATTTCTGTAGCTaGAGTTTCTCAGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PKWQSWFRHYNFKKRANRLDFCS*SFSGRF
Trigger: GAACCTGCCTGAGAAACTGCAGCTACAGAAATCCAA...TCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp TTTCTAGTTGTTCATGGAGGAACATTAAAGTCTGGTCCTTGTAACTACGGCCTGAGTTACTTTCCTAAGTaGCAGTCATGGTTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: FLVVHGGTLKSGPCNYGLSYFPK*QSWFRH
Trigger: GTGACGAAACCATGACTGCCACTTAGGAAAGTAACT...CAGGCCGTAGTTACAAGGACCAGACTTTAATGTTCCTCCATGAACAACTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR GCA 90 bp GGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTTGGATTTCTGTAGCTaGAGTTTCTCAGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GFVTTISRKELTDIYLTILDFCS*SFSGRF
Trigger: GAACCTGCCTGAGAAACTGCAGCTACAGAAATCCAA...GATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CCA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCAGTTACTTTCCTAAGTaGCAGTCATGGTTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: SGSHGFVTTISRKELTDISYFPK*QSWFRH
Trigger: GTGACGAAACCATGACTGCCACTTAGGAAAGTAACT...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 90 bp CACCGCAGTTTCCCCTGCGCCTCCTCCAGCTGGCTCCGTGTGTCCTaGAGAGCCGCCTCCTGCAGCTGGGTGCGGTGTGCCTGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: HRSFPCASSSWLRVS*RAASCSWVRCACSA
Trigger: GGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 90 bp GATGAAGGACTCGCGCACCGGGCGCGGCTCATGGCCTCCAGGTCCTaGAGCTCCCCGGCTCGGCTCTGGAGCTTCCTCTCCAGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: DEGLAHRARLMASRS*SSPARLWSFLSSSA
Trigger: CGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGTGCGCGAGTCCTTCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578187.1
ENST00000578910.1
CDS CCA 90 bp AGCACGCCTCGGGAGATGAAGGACTCGCGCACCGGGCGCGGCTCATaGCCTCCAGGTCCTGGAGCTCCCCGGCTCGGCTCTGGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: STPREMKDSRTGRGS*PPGPGAPRLGSGAS
Trigger: GGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGTGCGCGAGTCCTTCATCTCCCGAGGCGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578187.1
ENST00000578910.1
CDS TCA 90 bp TCCAGTCCTGGCCTGCGAGGCTGCCACAGAGCACGCCTCGGGAGATaGAGGACTCGCGCACCGGGCGCGGCTCATGGCCTCCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: SSPGLRGCHRARLGR*RTRAPGAAHGLQVL
Trigger: CAGGACCTGGAGGCCATGAGCCGCGCCCGGTGCGCGAGTCCTTCATCTCCCGAGGCGTGCTCTGTGGCAGCCTCGCAGGCCAGGACTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578187.1
ENST00000578910.1
CDS GCA 90 bp AGAGCCCAGGTGGGCCTCGCCTGGGTGGAGAGCCCGGCCACAGGATaGTCAGACCCAGGAGGAGCCTGGAGCCCGACTGTCGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: RAQVGLAWVESPATG*SDPGGAWSPTVASM
Trigger: CATGGAGGCGACAGTCGGGCTCCAGGCTCCTCCTGGGTCTGAGCATCCTGTGGCCGGGCTCTCCACCCAGGCGAGGCCCACCTGGGCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp GCACCCATCCGTGGTCGCCCGGCGCGCCGTTCCTGTCGCGTTCCTTaGCTGGCACTCTCGCGTGGAAGAGTGCCCCGTTCCCCTGACCGA +
Preference number: 5 (lower is better)
Translates to: APIRGRPARRSCRVP*LALSRGRVPRSPDR
Trigger: TCGGTCAGGGGAACGGGGCACTCTTCCACGCGAGAGTGCCAGCCAAGGAACGCGACAGGAACGGCGCGCCGGGCGACCACGGATGGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 90 bp TCTCCCAAGGGCCACGGCGTCCGAGGCTGGGGGCTGCTTCCTGCCTaGAGGCTCCGCTCCCCCGTGCTGGGCTATCCTGAGATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SPKGHGVRGWGLLPA*RLRSPVLGYPEMLP
Trigger: GGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGACGCCGTGGCCCTTGGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000665763.1
CDS GCA 90 bp AGCAAGGACCTGGGCCCGCCCTCGTCTCCAGGAGCTCAGCCATGCTaGTTGGCAGAGGACAGAGCCCAGGTGGGCCTCGCCTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SKDLGPPSSPGAQPC*LAEDRAQVGLAWVE
Trigger: CTCCACCCAGGCGAGGCCCACCTGGGCTCTGTCCTCTGCCAAGCAGCATGGCTGAGCTCCTGGAGACGAGGGCGGGCCCAGGTCCTTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp GCTCCGTGTGTCCTGCAGAGCCGCCTCCTGCAGCTGGGTGCGGTGTaGCTGCAGCGCCCTCCACTCCTCCTCCTTGCGAAGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: APCVLQSRLLQLGAV*LQRPPLLLLAKQQL
Trigger: GAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGACACACGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 90 bp GCCCCTGGTCTGGGGAGCCCATGCATCCTCAGGGCCTGCACGGCCTaGTCTCGTTCCAGGGTCACGGCCTTCAGCACCACCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: APGLGSPCILRACTA*SRSRVTAFSTTSCS
Trigger: GGAGCAGGAGGTGGTGCTGAAGGCCGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 90 bp CAGCCATGCTGCTTGGCAGAGGACAGAGCCCAGGTGGGCCTCGCCTaGGTGGAGAGCCCGGCCACAGGATGCTCAGACCCAGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: QPCCLAEDRAQVGLA*VESPATGCSDPGGA
Trigger: GGCTCCTCCTGGGTCTGAGCATCCTGTGGCCGGGCTCTCCACCCAGGCGAGGCCCACCTGGGCTCTGTCCTCTGCCAAGCAGCATGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp CCATCCGTGGTCGCCCGGCGCGCCGTTCCTGTCGCGTTCCTTGGCTaGCACTCTCGCGTGGAAGAGTGCCCCGTTCCCCTGACCGATCTG +
Preference number: 5 (lower is better)
Translates to: PSVVARRAVPVAFLG*HSRVEECPVPLTDL
Trigger: CAGATCGGTCAGGGGAACGGGGCACTCTTCCACGCGAGAGTGCCAGCCAAGGAACGCGACAGGAACGGCGCGCCGGGCGACCACGGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp AAGTCCTCCTGCAGGCACCGCAGTTTCCCCTGCGCCTCCTCCAGCTaGCTCCGTGTGTCCTGCAGAGCCGCCTCCTGCAGCTGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: KSSCRHRSFPCASSS*LRVSCRAASCSWVR
Trigger: CCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGGACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS TCA 90 bp CCACTCCTCCTCCTTGCGAAGCAGCAGCTCATTCAGGGCGGGCTCTaGGCCCAGTGGCAGCATGGTGGCCGCCTAACGCCCGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PLLLLAKQQLIQGGL*AQWQHGGRLTPASS
Trigger: GCTGCTGGCGGGCGTTAGGCGGCCACCATGCTGCCACTGGGCTCAGAGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS GCA 90 bp GCGGACCCCCGCCAGAAAGGAGGAAGAGGCCCCCAGGTAGGTGCGTaGTTCTGGACCTGGCGCTCGGCACACTGTGAGGATGGGCGGATG +
Preference number: 5 (lower is better)
Translates to: ADPRQKGGRGPQVGA*FWTWRSAHCEDGRM
Trigger: CATCCGCCCATCCTCACAGTGTGCCGAGCGCCAGGTCCAGAAGCACGCACCTACCTGGGGGCCTCTTCCTCCTTTCTGGCGGGGGTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS CCA 90 bp CATGCTGCTTGGCAGAGGACAGAGCCCAGGTGGGCCTCGCCTGGGTaGAGAGCCCGGCCACAGGATGCTCAGACCCAGGAGGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: HAAWQRTEPRWASPG*RARPQDAQTQEEPG
Trigger: TCCAGGCTCCTCCTGGGTCTGAGCATCCTGTGGCCGGGCTCTCCACCCAGGCGAGGCCCACCTGGGCTCTGTCCTCTGCCAAGCAGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp AGCATCTGTGCCCCTGGTCTGGGGAGCCCATGCATCCTCAGGGCCTaGACGGCCTGGTCTCGTTCCAGGGTCACGGCCTTCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: SICAPGLGSPCILRA*TAWSRSRVTAFSTT
Trigger: GGTGGTGCTGAAGGCCGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGGCACAGATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 90 bp CGTGTGTCCTGCAGAGCCGCCTCCTGCAGCTGGGTGCGGTGTGCCTaGAGCGCCCTCCACTCCTCCTCCTTGCGAAGCAGCAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: RVSCRAASCSWVRCA*SALHSSSLRSSSSF
Trigger: GAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGACACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 90 bp ACGCGCTCCAGCTCCAGGCGATGCTCCTGGAATGCCAGCTGCTGCTaGTGCTGCAGCTCCTCCACCTTCCTGGCCTCTCTGGCTAGCGCC +
Preference number: 5 (lower is better)
Translates to: TRSSSRRCSWNASCC*CCSSSTFLASLASA
Trigger: GGCGCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGAGCTGGAGCGCGT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 90 bp AATGGCAGCGTCCTTCTCCTTGGCGGTGTCAGCCTGTCTCCACTCTaGCCTGCGGAGCTGCGCCTCGAGGGTCTCGCAGTGGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: NGSVLLLGGVSLSPL*PAELRLEGLAVGLQ
Trigger: CTGCAGGCCCACTGCGAGACCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000578187.1
ENST00000665763.1
CDS CCA 90 bp CAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTaGCAGGAGGAGCTAGCGGGCACCCACCTCTCTCCCAAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: QSTGKDGFCGRNLGG*QEELAGTHLSPKGH
Trigger: GTGGCCCTTGGGAGAGAGGTGGGTGCCCGCTAGCTCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327026.7
ENST00000392343.3
CDS CCA 90 bp CCCAAGGAGGCGCCCGCCCGTGTCCGGGAACACATGGCGCTCAGGTaGGTGGGAGATGTGTGGGGGTACAGACATGCTTACCCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PKEAPARVREHMALR*VGDVWGYRHAYPWL
Trigger: CAGCCAGGGGTAAGCATGTCTGTACCCCCACACATCTCCCACCCACCTGAGCGCCATGTGTTCCCGGACACGGGCGGGCGCCTCCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp GAGCTCGGAGGCTGCATCACGGAAGGCGGGCACACAGGCCTCACTTaGGCGAGAAGAGACCCAGAGACGCATGGCCTTCCTCCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: ELGGCITEGGHTGLT*ARRDPETHGLPPGP
Trigger: CGGCCCAGGAGGAAGGCCATGCGTCTCTGGGTCTCTTCTCGCCCAAGTGAGGCCTGTGTGCCCGCCTTCCGTGATGCAGCCTCCGAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584717.1
CDS-3UTR CAA 90 bp GGGTGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCGGGCCACCTGTGCCTaGAGCTTCACCTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GWSRAHFQARPSLQPSSHRATCA*SFTSSS
Trigger: GGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCG...GTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS TCA 90 bp GCCCACGTGCTCCTTACCAAGCTCGCCTCCTGGTTCATGTTTGGGTaGAGGGCTCCACTCCACGCCAGGCTGGGCGTGGGGCCCACACCT +
Preference number: 5 (lower is better)
Translates to: AHVLLTKLASWFMFG*RAPLHARLGVGPTP
Trigger: AGGTGTGGGCCCCACGCCCAGCCTGGCGTGGAGTGGAGCCCTTCACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 90 bp CCAGGCTGTGCGGCTCAGCCCAGTGGGACCTGCCTGGGAGCAGAGTaGCCCACTGTTGTCCACAGGCTCTCCCTCTGCCATGGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: PGCAAQPSGTCLGAE*PTVVHRLSLCHGRS
Trigger: ACTTCTCCCATGGCAGAGGGAGAGCCTGTGGACAACAGTGGGGCACTCTGCTCCCAGGCAGGTCCCACTGGGCTGAGCCGCACAGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp AGGAGGCGCCCGCCCGTGTCCGGGAACACATGGCGCTCAGGTGGGTaGGAGATGTGTGGGGGTACAGACATGCTTACCCCTGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: RRRPPVSGNTWRSGG*EMCGGTDMLTPGCA
Trigger: AGCACAGCCAGGGGTAAGCATGTCTGTACCCCCACACATCTCCCACCCACCTGAGCGCCATGTGTTCCCGGACACGGGCGGGCGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp AGTGGGAAGACAGTGAACTACGCAAGGGCCAACAGTGAGAGCTCCTaGGGCCCCTTGCTGCCCAAGGAGGCGCCCGCCCGTGTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: SGKTVNYARANSESS*GPLLPKEAPARVRE
Trigger: TTCCCGGACACGGGCGGGCGCCTCCTTGGGCAGCAAGGGGCCCCAGGAGCTCTCACTGTTGGCCCTTGCGTAGTTCACTGTCTTCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp GGGACAGTCCCTGGACCCCTGTGCACTTCCTCACCCACCCTGCACTaGCTTCCTGCACTACAGGAGGTAGGCTGGAGACGCAGTGCCGCG +
Preference number: 5 (lower is better)
Translates to: GTVPGPLCTSSPTLH*LPALQEVGWRRSAA
Trigger: CGCGGCACTGCGTCTCCAGCCTACCTCCTGTAGTGCAGGAAGCCAGTGCAGGGTGGGTGAGGAAGTGCACAGGGGTCCAGGGACTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp CCCCGCCAGAAAGGAGGAAGAGGCCCCCAGGTAGGTGCGTGCTTCTaGACCTGGCGCTCGGCACACTGTGAGGATGGGCGGATGGAGTTG +
Preference number: 5 (lower is better)
Translates to: PRQKGGRGPQVGACF*TWRSAHCEDGRMEL
Trigger: CAACTCCATCCGCCCATCCTCACAGTGTGCCGAGCGCCAGGTCCAGAAGCACGCACCTACCTGGGGGCCTCTTCCTCCTTTCTGGCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS CCA 90 bp TGGAGCCCACGTGCTCCTTACCAAGCTCGCCTCCTGGTTCATGTTTaGGTGAAGGGCTCCACTCCACGCCAGGCTGGGCGTGGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: WSPRAPYQARLLVHV*VKGSTPRQAGRGAH
Trigger: GTGGGCCCCACGCCCAGCCTGGCGTGGAGTGGAGCCCTTCACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACGTGGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CTCCCTGTGCCGGCAGCCCAGAAACGGCCTTCAGGCAGAAGGCCAGGGCCCCAGTTGTGTCTTCGGGCCTaGCAGGGCGTCAAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: LPVPAAQKRPSGRRPGPQLCLRA*QGVKSA
Trigger: AGCAGACTTGACGCCCTGCAAGGCCCGAAGACACAA...CTGGGGCCCTGGCCTTCTGCCTGAAGGCCGTTTCTGGGCTGCCGGCACAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS TCA 90 bp GAGGCGCGTGACACGGGCGCATCCCAGCACTGGCGATGGGAGCTCTaGTCACTCGGGTCAGCTGGGGTCAAACAGGCTGCTCCACTGGAA +
Preference number: 5 (lower is better)
Translates to: EARDTGASQHWRWEL*SLGSAGVKQAAPLE
Trigger: TTCCAGTGGAGCAGCCTGTTTGACCCCAGCTGACCCGAGTGATCAGAGCTCCCATCGCCAGTGCTGGGATGCGCCCGTGTCACGCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 90 bp TGCTGTGTGGCTTGTCACCCTCCATGGCGTCTCTGCGCCTCCGTTTaGCTCCAGCTGCACGGCACACGGGGCGAGGTTAGCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: CCVACHPPWRLCASV*LQLHGTRGEVSIRG
Trigger: GCCCCTGATGCTAACCTCGCCCCGTGTGCCGTGCAGCTGGAGTCAAACGGAGGCGCAGAGACGCCATGGAGGGTGACAAGCCACACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS TCA 90 bp TCAATGTCATCACAGCGGCGCTGCCAGTCCAGGCCCAGCTGCACCTaGTCACGCTCCAGGCTCCGCTCCCTTTCCACTGCCAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: SMSSQRRCQSRPSCT*SRSRLRSLSTARDS
Trigger: GCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGACATTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS TCA 90 bp CCACTCCTCCTCCTTGCGAAGCAGCAGCTCATTCAGGGCGGGCTCTaGGCCCAGTGGCAGCATGGTGGCCGCCTGTGGTCTGACCTCTCT +
Preference number: 5 (lower is better)
Translates to: PLLLLAKQQLIQGGL*AQWQHGGRLWSDLS
Trigger: AGAGAGGTCAGACCACAGGCGGCCACCATGCTGCCACTGGGCTCAGAGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665763.1
CDS GCA 90 bp ACGGCCTGGTCTCGTTCCAGGGTCACGGCCTTCAGCACCACCTCCTaGTCCTGTAGCGCCTGCTCTGTCTCCTGCAGCTTGGCAGCAACC +
Preference number: 5 (lower is better)
Translates to: TAWSRSRVTAFSTTS*SCSACSVSCSLAAT
Trigger: GGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTGGTGCTGAAGGCCGTGACCCTGGAACGAGACCAGGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 90 bp GCTCCTTGGCTAGGGCCGTGGAAGGGGACCAGCTTTCGTCAGGAGTaGTGTGGGACAGTCCCTGGACCCCTGTGCACTTCCTCACCCACC +
Preference number: 5 (lower is better)
Translates to: APWLGPWKGTSFRQE*CGTVPGPLCTSSPT
Trigger: GGTGGGTGAGGAAGTGCACAGGGGTCCAGGGACTGTCCCACAGCACTCCTGACGAAAGCTGGTCCCCTTCCACGGCCCTAGCCAAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp CTTGTCACCCTCCATGGCGTCTCTGCGCCTCCGTTTGACTCCAGCTaGACGGCACACGGGGCGAGGTTAGCATCAGGGGCCAAAGCGGAC +
Preference number: 5 (lower is better)
Translates to: LVTLHGVSAPPFDSS*TAHGARLASGAKAD
Trigger: GTCCGCTTTGGCCCCTGATGCTAACCTCGCCCCGTGTGCCGTGCAGCTGGAGTCAAACGGAGGCGCAGAGACGCCATGGAGGGTGACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS GCA 90 bp TCATGGGAGGACGCCAGGGGTGCCCACCCAAGGAGCCTCTTCACCTaGTCTTCCAGGGTGGGCACTGCTGGCTGTCACTGGGTGACATCC +
Preference number: 5 (lower is better)
Translates to: SWEDARGAHPRSLFT*SSRVGTAGCHWVTS
Trigger: GGATGTCACCCAGTGACAGCCAGCAGTGCCCACCCTGGAAGAGCAGGTGAAGAGGCTCCTTGGGTGGGCACCCCTGGCGTCCTCCCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS GCA 90 bp CTCCTGCAGCTGCTCCACGTGGGCTCCCTTCACCGCCACCAGCACTaGATCCTTCTCCCTGGCCAGACGGTCGAGCTCCTCATGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LLQLLHVGSLHRHQH*ILLPGQTVELLMLP
Trigger: AGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000578187.1
ENST00000578910.1
ENST00000665763.1
CDS CCA 90 bp CCACCCTGGAGTGGCTGGACTGGGAGCCCAGGAGGGCTAGGGTGCTaGAGACCCCTGAGGACAAGACCTCCTTACCAACAGGTACAGGGG +
Preference number: 5 (lower is better)
Translates to: PPWSGWTGSPGGLGC*RPLRTRPPYQQVQG
Trigger: CCCCTGTACCTGTTGGTAAGGAGGTCTTGTCCTCAGGGGTCTCCAGCACCCTAGCCCTCCTGGGCTCCCAGTCCAGCCACTCCAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp TGGGTGGAGAGCCCGGCCACAGGATGCTCAGACCCAGGAGGAGCCTaGAGCCCGACTGTCGCCTCCATGCATGTAGACACAGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: WVESPATGCSDPGGA*SPTVASMHVDTEPG
Trigger: TCCAGGCTCTGTGTCTACATGCATGGAGGCGACAGTCGGGCTCCAGGCTCCTCCTGGGTCTGAGCATCCTGTGGCCGGGCTCTCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp CTCCACATGTCCTGGAGGGTGCCACTGGCAAAGGAGGAGGAGCTGTaGGATTGGCGACCATGCTCCTCAGGGTGCTGGGGAGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: LHMSWRVPLAKEEEL*DWRPCSSGCWGAWG
Trigger: ACCCCAGGCTCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000389641.9
ENST00000392345.6
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 90 bp CTGCACCTGAGCCTCAGCTCAGCTCTTGACCAAGTTGGCCTCTGGTaGCTCATTCTCCAGGCTGCTCCGGGCTCTCTGGGTGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LHLSLSSALDQVGLW*LILQAAPGSLGAPG
Trigger: CCCAGGGGCACCCAGAGAGCCCGGAGCAGCCTGGAGAATGAGCCACCAGAGGCCAACTTGGTCAAGAGCTGAGCTGAGGCTCAGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582100.1
CDS-3UTR CAA 90 bp GCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCCTGGGTCAGGCTGGTTaGCATCTGTGCTCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: AGRAQARTVSVAGTSAGGLGQAG*HLCSLP
Trigger: CGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG...GCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGAGGCGGCAGGACTGCTaGAGCCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWRRQDC*SPGVRD
Trigger: GTCTCGAACTCCTGGGCTCAAGCAGTCCTGCCGCCT...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 90 bp GGAGAAGTGGGAACACGTGCCTCCGCACACACCTGGTCCCAGCTTTaGAGACCTGGCTCCTTGGCTAGGGCCGTGGAAGGGGACCAGCTT +
Preference number: 5 (lower is better)
Translates to: GEVGTRASAHTWSQL*RPGSLARAVEGDQL
Trigger: AAGCTGGTCCCCTTCCACGGCCCTAGCCAAGGAGCCAGGTCTGCAAAGCTGGGACCAGGTGTGTGCGGAGGCACGTGTTCCCACTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp TGCCTGGGAGCAGAGTGCCCCACTGTTGTCCACAGGCTCTCCCTCTaGCATGGGAGAAGTGGGAACACGTGCCTCCGCACACACCTGGTC +
Preference number: 5 (lower is better)
Translates to: CLGAECPTVVHRLSL*HGRSGNTCLRTHLV
Trigger: GACCAGGTGTGTGCGGAGGCACGTGTTCCCACTTCTCCCATGGCAGAGGGAGAGCCTGTGGACAACAGTGGGGCACTCTGCTCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp ATACAGACAGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTaGCAGGAACCTCGGCGGGTGGCAGGAGGAGCTAGCGGGCACCCA +
Preference number: 5 (lower is better)
Translates to: IQTATLAEHRQGRFL*QEPRRVAGGASGHP
Trigger: TGGGTGCCCGCTAGCTCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327026.7
ENST00000392343.3
CDS CCA 90 bp AGGGGGCCCTGCTGGTCGGCTCTGCCAAGCTGCAGAATCAGGACCTaGGGTCGTCTCCACAGCTCAGAGCTGTGGCTCAAACCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: RGPCWSALPSCRIRT*GRLHSSELWLKPSH
Trigger: ATGGCTGGGTTTGAGCCACAGCTCTGAGCTGTGGAGACGACCCCAGGTCCTGATTCTGCAGCTTGGCAGAGCCGACCAGCAGGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp TTGGCTAGGGCCGTGGAAGGGGACCAGCTTTCGTCAGGAGTGCTGTaGGACAGTCCCTGGACCCCTGTGCACTTCCTCACCCACCCTGCA +
Preference number: 5 (lower is better)
Translates to: LARAVEGDQLSSGVL*DSPWTPVHFLTHPA
Trigger: TGCAGGGTGGGTGAGGAAGTGCACAGGGGTCCAGGGACTGTCCCACAGCACTCCTGACGAAAGCTGGTCCCCTTCCACGGCCCTAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp GTGCCTCCGCACACACCTGGTCCCAGCTTTGCAGACCTGGCTCCTTaGCTAGGGCCGTGGAAGGGGACCAGCTTTCGTCAGGAGTGCTGT +
Preference number: 5 (lower is better)
Translates to: VPPHTPGPSFADLAP*LGPWKGTSFRQECC
Trigger: ACAGCACTCCTGACGAAAGCTGGTCCCCTTCCACGGCCCTAGCCAAGGAGCCAGGTCTGCAAAGCTGGGACCAGGTGTGTGCGGAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp CCTTGCAGGGCGTCAAGTCTGCTGCCCACCTGTGCTGAGCGGGGCTaGTGCTTTCCCAAGTGTCTGGAAGGAGCCTCATCCTCGGCACTC +
Preference number: 5 (lower is better)
Translates to: PCRASSLLPTCAERG*CFPKCLEGASSSAL
Trigger: GAGTGCCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGACTTGACGCCCTGCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 90 bp TGCTGCCCACCTGTGCTGAGCGGGGCTGGTGCTTTCCCAAGTGTCTaGAAGGAGCCTCATCCTCGGCACTCTTGGCGTCCTGCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CCPPVLSGAGAFPSV*KEPHPRHSWRPALS
Trigger: GGAGAGAGCAGGACGCCAAGAGTGCCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392347.5
CDS-3UTR CAA 90 bp AACTGTGGCCGGCGTCTCCAGGAAAGGAAGGAGCCTCGCTTTCTCCAGGGCAGGGAGGCTCCTGTGGTCTaGGCCTTTGCCTGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: NCGRRLQERKEPRFLQGREAPVV*AFAWAA
Trigger: AGCAGCCCAGGCAAAGGCCAAGACCACAGGAGCCTC...CCTGCCCTGGAGAAAGCGAGGCTCCTTCCTTTCCTGGAGACGCCGGCCACAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583593.2
CDS-3UTR CAA 90 bp GGGTGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACTCAATCTCACCATTCTaGTCACTGTGGACGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GWSRAHFQARPSLQPSSHSISPF*SLWTRS
Trigger: GGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGA...GTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp GCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGACTCTCTGCAGCCTTaGCCCCGGCTTCCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: AALVPPELPGHTDSNAGRDSLQP*PRLPSE
Trigger: CTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTC...TCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS TCA 90 bp TGTCTTCGGGCCTTGCAGGGCGTCAAGTCTGCTGCCCACCTGTGCTaGGCGGGGCTGGTGCTTTCCCAAGTGTCTGGAAGGAGCCTCATC +
Preference number: 5 (lower is better)
Translates to: CLRALQGVKSAAHLC*AGLVLSQVSGRSLI
Trigger: GATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGACTTGACGCCCTGCAAGGCCCGAAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS GCA 90 bp GCCGTTCCTGTCGCGTTCCTTGGCTGGCACTCTCGCGTGGAAGAGTaGCCCGTTCCCCTGACCGATCTGTCCATTGCTATCAGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: AVPVAFLGWHSRVEE*PVPLTDLSIAISLD
Trigger: GTCCAGGCTGATAGCAATGGACAGATCGGTCAGGGGAACGGGGCACTCTTCCACGCGAGAGTGCCAGCCAAGGAACGCGACAGGAACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp TGCAGGGCGTCAAGTCTGCTGCCCACCTGTGCTGAGCGGGGCTGGTaGTTTCCCAAGTGTCTGGAAGGAGCCTCATCCTCGGCACTCTTG +
Preference number: 5 (lower is better)
Translates to: CRASSLLPTCAERGW*FPKCLEGASSSALL
Trigger: CAAGAGTGCCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGACTTGACGCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 90 bp TGCCCATCCCATGCCAAGGCAGCTCTGGCCTGCTCCTCACTGTCCTaGAGCCTGAGACAGCCACGGCCGCATCTTCCTCAGTCCACTCTA +
Preference number: 5 (lower is better)
Translates to: CPSHAKAALACSSLS*SLRQPRPHLPQSTL
Trigger: TAGAGTGGACTGAGGAAGATGCGGCCGTGGCTGTCTCAGGCTCCAGGACAGTGAGGAGCAGGCCAGAGCTGCCTTGGCATGGGATGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327026.7
ENST00000475635.1
CDS CCA 90 bp ACACCTGGTCCCAGCTTTGCAGACCTGGCTCCTTGGCTAGGGCCGTaGAAGGGGACCAGCTTTCGTCAGGAGTGCTGTGGGACAGTCCCT +
Preference number: 5 (lower is better)
Translates to: TPGPSFADLAPWLGP*KGTSFRQECCGTVP
Trigger: AGGGACTGTCCCACAGCACTCCTGACGAAAGCTGGTCCCCTTCCACGGCCCTAGCCAAGGAGCCAGGTCTGCAAAGCTGGGACCAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp GTGCCCCACTGTTGTCCACAGGCTCTCCCTCTGCCATGGGAGAAGTaGGAACACGTGCCTCCGCACACACCTGGTCCCAGCTTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: VPHCCPQALPLPWEK*EHVPPHTPGPSFAD
Trigger: GTCTGCAAAGCTGGGACCAGGTGTGTGCGGAGGCACGTGTTCCCACTTCTCCCATGGCAGAGGGAGAGCCTGTGGACAACAGTGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp CTTGGCGTCCTGAGATGTAAAATGGGGCTGCACCTGTCCCAAAGGTaGGCTGCGATCCAAAGGCCTCCTGGGCTCCTCGCCTGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: LGVLRCKMGLHLSQR*AAIQRPPGLLAWLP
Trigger: CGGAAGCCAGGCGAGGAGCCCAGGAGGCCTTTGGATCGCAGCCCACCTTTGGGACAGGTGCAGCCCCATTTTACATCTCAGGACGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392346.6
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 90 bp CCGGGCCTCAGGGGCAGGAGGGAGGGCGTGGTGCAACAGCCACCCTaGGAATGGGATGGGGACAGAGTTTGTTCTCTGTGCATCACTTCT +
Preference number: 5 (lower is better)
Translates to: PGLRGRREGVVQQPP*EWDGDRVCSLCITS
Trigger: AGAAGTGATGCACAGAGAACAAACTCTGTCCCCATCCCATTCCCAGGGTGGCTGTTGCACCACGCCCTCCCTCCTGCCCCTGAGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483145.1
CDS CCA 90 bp CTGTCCTATTGCAGGGAAGGTGCGGCCCTCACTCCCGTCTCAGCCTaGGGGCATGAGAACTCTGAGCACAAAGAGGACGGAGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: LSYCREGAALTPVSA*GHENSEHKEDGAGP
Trigger: GGGACCAGCTCCGTCCTCTTTGTGCTCAGAGTTCTCATGCCCCCAGGCTGAGACGGGAGTGAGGGCCGCACCTTCCCTGCAATAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582100.1
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGGAGGAGCTGTGGGATaGGCGACCATGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPGGAVG*ATMLLR
Trigger: CCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGAGGAGCTGTGGGATaGGCGACCATGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVGGAVG*ATMLLR
Trigger: CCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCC...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGCCGCGCTGCATGTTTTaGCACACTGAGGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWPRCMF*HTEELP
Trigger: AGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCGG...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS TCA 90 bp GCCTCAGGCTCCCTCGGCCTTCCCATACCTGCCCTGTTGTACCCCTaGGGCATCCTTATGGTCTTGCCCATCCCATGCCAAGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: ASGSLGLPIPALLYP*GILMVLPIPCQGSS
Trigger: AGAGCTGCCTTGGCATGGGATGGGCAAGACCATAAGGATGCCTCAGGGGTACAACAGGGCAGGTATGGGAAGGCCGAGGGAGCCTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 90 bp CTCAATATCTTACCGACCAGCTCAGCCCTTCCTGTGCGCACTGGCTaGGCACCTGCTAGGGCCTCAGGCTCCCTCGGCCTTCCCATACCT +
Preference number: 5 (lower is better)
Translates to: LNILPTSSALPVRTG*APARASGSLGLPIP
Trigger: AGGTATGGGAAGGCCGAGGGAGCCTGAGGCCCTAGCAGGTGCTCAGCCAGTGCGCACAGGAAGGGCTGAGCTGGTCGGTAAGATATTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp ATCAGGAGTGGCGGCATCTCCCCCAGCCTCTGGGTCAGGCTGGTTTaGATCTGTGCTCTCTGCCGCTGTCTGGATGGGAGGAGGAATCTG +
Preference number: 5 (lower is better)
Translates to: IRSGGISPSLWVRLV*ICALCRCLDGRRNL
Trigger: CAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGCTGGGGGAGATGCCGCCACTCCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1
CDS GCA 90 bp GTTGTCCACAGGCTCTCCCTCTGCCATGGGAGAAGTGGGAACACGTaGCTCCGCACACACCTGGTCCCAGCTTTGCAGACCTGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: VVHRLSLCHGRSGNT*LRTHLVPALQTWLL
Trigger: AAGGAGCCAGGTCTGCAAAGCTGGGACCAGGTGTGTGCGGAGGCACGTGTTCCCACTTCTCCCATGGCAGAGGGAGAGCCTGTGGACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp ACCTGGCGCTCGGCACACTGTGAGGATGGGCGGATGGAGTTGGTCTaGAGGTTCCAGAATGAATGGGGCCCTGGAGTTGAGTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: TWRSAHCEDGRMELV*RFQNEWGPGVESPW
Trigger: CCAGGGTGACTCAACTCCAGGGCCCCATTCATTCTGGAACCTGCAGACCAACTCCATCCGCCCATCCTCACAGTGTGCCGAGCGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS GCA 90 bp AGCTTTTGCAGGATGAGACCGGGAGGCTCCTGTGGTCTTGGCCTTTaGCTGGGCTGCTGTCTTCATCCCTGGGGTGGCAATGCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SFCRMRPGGSCGLGL*LGCCLHPWGGNACL
Trigger: CAGGCAGGCATTGCCACCCCAGGGATGAAGACAGCAGCCCAGGCAAAGGCCAAGACCACAGGAGCCTCCCGGTCTCATCCTGCAAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389641.9
ENST00000392345.6
ENST00000392347.5
ENST00000584717.1
ENST00000665763.1
CDS GCA 90 bp TGTGGATGCTGTGTTGTGTCTTCGGGCCTTGCAGGGCGTCAAGTCTaGTGCCCACCTGTGCTGAGCGGGGCTGGTGCTTTCCCAAGTGTC +
Preference number: 5 (lower is better)
Translates to: CGCCVVSSGLAGRQV*CPPVLSGAGAFPSV
Trigger: GACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGACTTGACGCCCTGCAAGGCCCGAAGACACAACACAGCATCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS GCA 90 bp GGAATGAGCAGAAAAGGTAGAATCCCCCAGACTCCAGTCCTGGCCTaGGAGGCTGCCACAGAGCACGCCTCGGGAGATGAAGGACTCGCG +
Preference number: 5 (lower is better)
Translates to: GMSRKGRIPQTPVLA*EAATEHASGDEGLA
Trigger: CGCGAGTCCTTCATCTCCCGAGGCGTGCTCTGTGGCAGCCTCGCAGGCCAGGACTGGAGTCTGGGGGATTCTACCTTTTCTGCTCATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578187.1
ENST00000578910.1
CDS CCA 90 bp TCCTCACCCACCCTGCACTGGCTTCCTGCACTACAGGAGGTAGGCTaGAGACGCAGTGCCGCGTCACACCTCAGTACTTGGGTGGGTGTA +
Preference number: 5 (lower is better)
Translates to: SSPTLHWLPALQEVG*RRSAASHLSTWVGV
Trigger: TACACCCACCCAAGTACTGAGGTGTGACGCGGCACTGCGTCTCCAGCCTACCTCCTGTAGTGCAGGAAGCCAGTGCAGGGTGGGTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp CGTGCTTCTGGACCTGGCGCTCGGCACACTGTGAGGATGGGCGGATaGAGTTGGTCTGCAGGTTCCAGAATGAATGGGGCCCTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: RASGPGARHTVRMGG*SWSAGSRMNGALEL
Trigger: CAACTCCAGGGCCCCATTCATTCTGGAACCTGCAGACCAACTCCATCCGCCCATCCTCACAGTGTGCCGAGCGCCAGGTCCAGAAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS CCA 90 bp GCTGCCTCCTTCAGCTTTCTCTGGAGTCGGTGCATAGATAAGGTCTaGGGGGCACGTGCCACTGACCGGAGGTGCAGGAAAAGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: AASFSFLWSRCIDKV*GARATDRRCRKSSP
Trigger: GGGGGAGCTTTTCCTGCACCTCCGGTCAGTGGCACGTGCCCCCCAGACCTTATCTATGCACCGACTCCAGAGAAAGCTGAAGGAGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392346.6
ENST00000419322.6
ENST00000665763.1
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCTGGGTCAGGCTGGTTaGCATCTGTGCTCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPLGQAG*HLCSLP
Trigger: CGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCTTCACTGCAGCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGGGATACTGGGCCAGCTaGGACAGATCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PSLQPSSHLSSQGIQTATGYWAS*DRSSCL
Trigger: CAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCC...CGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGCTGCAGTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGGAGGAGCTGTGGGATaGGCGACCATGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSGGAVG*ATMLLR
Trigger: CCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGAGGCTCCTGTGGTCTaGGCCTTTGCCTGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSEAPVV*AFAWAA
Trigger: AGCAGCCCAGGCAAAGGCCAAGACCACAGGAGCCTC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGGAGGCTCCTGTGGTCTaGGCCTTTGCCTGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGEAPVV*AFAWAA
Trigger: AGCAGCCCAGGCAAAGGCCAAGACCACAGGAGCCTC...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTTCCCGCCAGCGTGGCTaGGCCCTCCTCCACTCCTTG +
Preference number: 5 (lower is better)
Translates to: GALFCSFLLAGFCPEMPASRQRG*ALLHSL
Trigger: CAAGGAGTGGAGGAGGGCCAAGCCACGCTGGCGGGA...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR CAA 90 bp GCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGATTAGCTGCCTCTATCTaGAGCTCGCTCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: AEHRQGRFLWQEPRRVAGLAASI*SSLTSA
Trigger: GGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAA...TCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGCGGGACAAGGCTGTGTaGCTCATGTTGTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SNAGRAQARTVSVAGTSARDKAV*LMLSAC
Trigger: GCAGGCTGACAACATGAGCAACACAGCCTTGTCCCG...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGACTCTCTGCAGCCTTaGCCCCGGCTTCCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPDSLQP*PRLPSE
Trigger: CTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp TGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCTGTGCATCTTCACGAAGTaGGTCAATGGCAGCGTCCTT +
Preference number: 5 (lower is better)
Translates to: WSRAHFQARPSLQPSSHLCIFTK*VNGSVL
Trigger: AAGGACGCTGCCATTGACCAACTTCGTGAAGATGCA...CAGGTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCAGCAGCATTaGGGAGCCTGCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSPQQH*GACPAA
Trigger: AGCTGCAGGGCAGGCTCCCAAATGCTGCTGAGGCGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATCGCCTCAGCAGCATTaGGGAGCCTGCCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSPQQH*GACPAA
Trigger: AGCTGCAGGGCAGGCTCCCAAATGCTGCTGAGGCGA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGGCGGGGTGGACCTGTaGGGTGTTTATGTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: LVPPELPGHTDSNAGRAQGGVDL*GVYVLG
Trigger: ACCCAAGACATAAACACCCAACAGGTCCACCCCGCC...CTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp AAGGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTTCCATAGGCCCTCTCTaGGTGAGGCCCTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: KGGGLVRDLGLVQGLGLVSIGPL*VRPSLP
Trigger: TGGGAGAGAGGGCCTCACCAAGAGAGGGCCTATGGA...AACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS TCA 90 bp AACAAGAGAGCAGGGTCCTCTCCTTCCTGGACAGCAGGACTGTCCTaGTCCCACTGCAAGGCTGCTGTGATGGTGACCAGTGAGGCCCGC +
Preference number: 5 (lower is better)
Translates to: NKRAGSSPSWTAGLS*SHCKAAVMVTSEAR
Trigger: GCGGGCCTCACTGGTCACCATCACAGCAGCCTTGCAGTGGGATCAGGACAGTCCTGCTGTCCAGGAAGGAGAGGACCCTGCTCTCTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 90 bp GCCCAGCTGCACCTGATCACGCTCCAGGCTCCGCTCCCTTTCCACTaGCAGGGACAGCTGTTGCTTGTACCTTTCAATGTCCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: AQLHLITLQAPLPFH*QGQLLLVPFNVLLG
Trigger: TCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 90 bp GGTTTGAAGCTGGTGGAATCTCAGGGAGGACATAGCCTGTCCTATTaGAGGGAAGGTGCGGCCCTCACTCCCGTCTCAGCCTGGGGGCAT +
Preference number: 5 (lower is better)
Translates to: GLKLVESQGGHSLSY*REGAALTPVSAWGH
Trigger: ATGCCCCCAGGCTGAGACGGGAGTGAGGGCCGCACCTTCCCTGCAATAGGACAGGCTATGTCCTCCCTGAGATTCCACCAGCTTCAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582100.1
CDS CCA 90 bp TCGGCCTTCCCATACCTGCCCTGTTGTACCCCTGAGGCATCCTTATaGTCTTGCCCATCCCATGCCAAGGCAGCTCTGGCCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SAFPYLPCCTPEASL*SCPSHAKAALACSS
Trigger: TGAGGAGCAGGCCAGAGCTGCCTTGGCATGGGATGGGCAAGACCATAAGGATGCCTCAGGGGTACAACAGGGCAGGTATGGGAAGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp ACACCAGAAGGGCTGGATCCCAGGTCTAGCAACCTCCACATGTCCTaGAGGGTGCCACTGGCAAAGGAGGAGGAGCTGTGGGATTGGCGA +
Preference number: 5 (lower is better)
Translates to: TPEGLDPRSSNLHMS*RVPLAKEEELWDWR
Trigger: TCGCCAATCCCACAGCTCCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTTGCTAGACCTGGGATCCAGCCCTTCTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000389641.9
ENST00000392345.6
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000583593.2
ENST00000665763.1
CDS CCA 90 bp TCTGGACCTGGCGCTCGGCACACTGTGAGGATGGGCGGATGGAGTTaGTCTGCAGGTTCCAGAATGAATGGGGCCCTGGAGTTGAGTCAC +
Preference number: 5 (lower is better)
Translates to: SGPGARHTVRMGGWS*SAGSRMNGALELSH
Trigger: GTGACTCAACTCCAGGGCCCCATTCATTCTGGAACCTGCAGACCAACTCCATCCGCCCATCCTCACAGTGTGCCGAGCGCCAGGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS-3UTR CAA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCGGGCCACCTGTGCCTaGAGCTTCACCTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGRATCA*SFTSSS
Trigger: GGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACGGGCCACCTGTGCCTaGAGCTTCACCTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSRATCA*SFTSSS
Trigger: GGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGGATACTGGGCCAGCTaGGACAGATCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPGYWAS*DRSSCL
Trigger: CAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCGTGTGGATGCTGTGTaGTGTCTTCGGGCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRVDAV*CLRALQ
Trigger: CTGCAAGGCCCGAAGACACAACACAGCATCCACACG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGAGCCTGGGGTGGCTTaGGGGACCTGTCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPEPGVA*GTCLLS
Trigger: AGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCTC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTCGGGACAAGGCTGTGTaGCTCATGTTGTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRDKAV*LMLSAC
Trigger: GCAGGCTGACAACATGAGCAACACAGCCTTGTCCCG...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGACTCTCTGCAGCCTTaGCCCCGGCTTCCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSDSLQP*PRLPSE
Trigger: CTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp GCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTGGCAGGGACAGCTGTTGCTaGTACCTTTCAATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: AGRAQARTVSVAGTSAGGRDSCC*YLSMSC
Trigger: GCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCT...GCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCATCCTCGGCACTCTaGGCGTCCTGCTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGSSSAL*ASCSLP
Trigger: TGGGAGAGAGCAGGACGCCAAGAGTGCCGAGGATGA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392347.5
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATCATCCTCGGCACTCTaGGCGTCCTCTCTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSSSAL*ASSLPR
Trigger: CCTTGGGAGAGAGGACGCCAAGAGTGCCGAGGATGA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389641.9
CDS TCA 90 bp GTGTCACCAGCAGGTTTAGGAGCTGCACTCTGTCCCCGAGCTTCCTaGGTGCCAGTCCAGAGGATACTGGGCCAGCTTGGACAGATCCTC +
Preference number: 5 (lower is better)
Translates to: VSPAGLGAALCPRAS*VPVQRILGQLGQIL
Trigger: GAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCTGGTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000665763.1
CDS TCA 90 bp CGTTCCTTGGCTGGCACTCTCGCGTGGAAGAGTGCCCCGTTCCCCTaGCCGATCTGTCCATTGCTATCAGCCTGGACCCATGATTTCCTG +
Preference number: 5 (lower is better)
Translates to: RSLAGTLAWKSAPFP*PICPLLSAWTHDFL
Trigger: CAGGAAATCATGGGTCCAGGCTGATAGCAATGGACAGATCGGTCAGGGGAACGGGGCACTCTTCCACGCGAGAGTGCCAGCCAAGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 90 bp GGAAATAAGAAGTCACGTGTGGGGAGATGCTGCTTCGCATCCGTCTaGTGGGAATCCCTCTGGTTCAGCACCCATCCGTGGTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: GNKKSRVGRCCFASV*WESLWFSTHPWSPG
Trigger: GCCGGGCGACCACGGATGGGTGCTGAACCAGAGGGATTCCCATCAGACGGATGCGAAGCAGCATCTCCCCACACGTGACTTCTTATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 90 bp GGGAGCCTGGGGTGGCTTTGGGGACCTGTCTTCTTTCTGCCGAGGTaGTTTACAGGTCACCGTGTGGATGCTGTGTTGTGTCTTCGGGCC +
Preference number: 5 (lower is better)
Translates to: GSLGWLWGPVFFLPR*FTGHRVDAVLCLRA
Trigger: GGCCCGAAGACACAACACAGCATCCACACGGTGACCTGTAAATCACCTCGGCAGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000389641.9
ENST00000392345.6
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS TCA 90 bp AGGACTGTCCTGATCCCACTGCAAGGCTGCTGTGATGGTGACCAGTaGGGCCCGCGCTGCATGTTTTTGCACACTGAGGAGCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: RTVLIPLQGCCDGDQ*GPRCMFLHTEELPP
Trigger: TGGAGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCGGGCCTCACTGGTCACCATCACAGCAGCCTTGCAGTGGGATCAGGACAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 90 bp TTCCCATACCTGCCCTGTTGTACCCCTGAGGCATCCTTATGGTCTTaGCCATCCCATGCCAAGGCAGCTCTGGCCTGCTCCTCACTGTCC +
Preference number: 5 (lower is better)
Translates to: FPYLPCCTPEASLWS*PSHAKAALACSSLS
Trigger: GGACAGTGAGGAGCAGGCCAGAGCTGCCTTGGCATGGGATGGGCAAGACCATAAGGATGCCTCAGGGGTACAACAGGGCAGGTATGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp CCCGACTGTCGCCTCCATGCATGTAGACACAGAGCCTGGAGTGTATaGCCCGCCTGTGCCTTAGCTCCAATAACTGGGATTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PDCRLHACRHRAWSV*PACALAPITGIGLQ
Trigger: CTGCAGCCCAATCCCAGTTATTGGAGCTAAGGCACAGGCGGGGCATACACTCCAGGCTCTGTGTCTACATGCATGGAGGCGACAGTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp CCTGCACTGGCTTCCTGCACTACAGGAGGTAGGCTGGAGACGCAGTaGCGCGTCACACCTCAGTACTTGGGTGGGTGTACACAATACGTG +
Preference number: 5 (lower is better)
Translates to: PALASCTTGGRLETQ*RVTPQYLGGCTQYV
Trigger: CACGTATTGTGTACACCCACCCAAGTACTGAGGTGTGACGCGGCACTGCGTCTCCAGCCTACCTCCTGTAGTGCAGGAAGCCAGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp TGTGAGACTCTGCCCTGTTGTACCCCTGAGGCATCCTTATGGTCTTaGCCATCCCATGCCAAGGCAGCTCTGGCCTGCTCCTCACTGTCC +
Preference number: 5 (lower is better)
Translates to: CETLPCCTPEASLWS*PSHAKAALACSSLS
Trigger: GGACAGTGAGGAGCAGGCCAGAGCTGCCTTGGCATGGGATGGGCAAGACCATAAGGATGCCTCAGGGGTACAACAGGGCAGAGTCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475635.1
CDS CCA 90 bp CACGAAGTCAACGGCCTCTGGTGCTCTGGGAAGCAGCTTTATCCCTaGACCATGAGCCACCTAATTATGAGGGCCAGCCCCACTCCCAGC +
Preference number: 5 (lower is better)
Translates to: HEVNGLWCSGKQLYP*TMSHLIMRASPTPS
Trigger: GCTGGGAGTGGGGCTGGCCCTCATAATTAGGTGGCTCATGGTCCAGGGATAAAGCTGCTTCCCAGAGCACCAGAGGCCGTTGACTTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp CTGCACTCTGTCCCCGAGCTTCCTGAGTGCCAGTCCAGAGGATACTaGGCCAGCTTGGACAGATCCTCCTGCTTGACCAGCTTGGACAGA +
Preference number: 5 (lower is better)
Translates to: LHSVPELPECQSRGY*ASLDRSSCLTSLDR
Trigger: TCTGTCCAAGCTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGAGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000577530.1
ENST00000665763.1
CDS CCA 90 bp GGTCCCACCTGGCATTTCTACATGGGGTCTCCCAGGTCTCCTAACTaGAGTGGCTCCCCAGCTTCCATGTTTGGGCACTCGCCAAGCATC +
Preference number: 5 (lower is better)
Translates to: GPTWHFYMGSPRSPN*SGSPASMFGHSPSI
Trigger: GATGCTTGGCGAGTGCCCAAACATGGAAGCTGGGGAGCCACTCCAGTTAGGAGACCTGGGAGACCCCATGTAGAAATGCCAGGTGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp TTGATGCATCTTCACGAAGTTGGTCAATGGCAGCGTCCTTCTCCTTaGCGGTGTCAGCCTGTCTCCACTCTGCCCTGCGGAGCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: LMHLHEVGQWQRPSP*RCQPVSTLPCGAAP
Trigger: AGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTGAAGATGCATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 90 bp CGACAGTGTGAGACTCTGCCCTGTTGTACCCCTGAGGCATCCTTATaGTCTTGCCCATCCCATGCCAAGGCAGCTCTGGCCTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RQCETLPCCTPEASL*SCPSHAKAALACSS
Trigger: TGAGGAGCAGGCCAGAGCTGCCTTGGCATGGGATGGGCAAGACCATAAGGATGCCTCAGGGGTACAACAGGGCAGAGTCTCACACTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475635.1
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATTGTGTCTTCGGGCCTaGCAGGGCGTCAAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLCLRA*QGVKSA
Trigger: AGCAGACTTGACGCCCTGCAAGGCCCGAAGACACAA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCACGTGTGGATGCTGTGTaGTGTCTTCGGGCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSRVDAV*CLRALQ
Trigger: CTGCAAGGCCCGAAGACACAACACAGCATCCACACG...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGAGCCTGGGGTGGCTTaGGGGACCTGTCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSEPGVA*GTCLLS
Trigger: AGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCTC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCCCCAGTGCTCCCTTCTaGGCCAGAGCACTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASPSAPF*ARALVL
Trigger: AAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGGG...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTTAGCTGCCTCTATCTaGAGCTCGCTCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPLAASI*SSLTSA
Trigger: GGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGCGGGACAAGGCTGTGTaGCTCATGTTGTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGRDKAV*LMLSAC
Trigger: GCAGGCTGACAACATGAGCAACACAGCCTTGTCCCG...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp TTATCCTCTAAATCCTTTACCCGGGCGCGGCTCATGGCCTCCAGGTCCTGGAGCCGGGACAAGGCTGTGTaGCTCATGTTGTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LSSKSFTRARLMASRSWSRDKAV*LMLSAC
Trigger: GCAGGCTGACAACATGAGCAACACAGCCTTGTCCCG...GCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CAA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAATTGGGTGTTTATGTCTaGGGGACTGAGCCCTCACCC +
Preference number: 5 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQLGVYV*GTEPSP
Trigger: GGGTGAGGGCTCAGTCCCCAAGACATAAACACCCAA...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS TCA 90 bp AGTGCCGCGTCACACCTCAGTACTTGGGTGGGTGTACACAATACGTaGCCTGGTCCGTGGCCCGTGTGCAAATGTCACCAACCGTCCAGA +
Preference number: 5 (lower is better)
Translates to: SAASHLSTWVGVHNT*PGPWPVCKCHQPSR
Trigger: TCTGGACGGTTGGTGACATTTGCACACGGGCCACGGACCAGGTCACGTATTGTGTACACCCACCCAAGTACTGAGGTGTGACGCGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp CGCAGCACCTTCTGTCTGAGTCGTGTCACCAGCAGGTTTAGGAGCTaGACTCTGTCCCCGAGCTTCCTGAGTGCCAGTCCAGAGGATACT +
Preference number: 5 (lower is better)
Translates to: RSTFCLSRVTSRFRS*TLSPSFLSASPEDT
Trigger: AGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000665763.1
CDS GCA 90 bp AAGGCTGCTGTGATGGTGACCAGTGAGGCCCGCGCTGCATGTTTTTaGACACTGAGGAGCTGCCTCCATTCATTCCCCCTCGCATTCCTG +
Preference number: 5 (lower is better)
Translates to: KAAVMVTSEARAACF*TLRSCLHSFPLAFL
Trigger: CAGGAATGCGAGGGGGAATGAATGGAGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCGGGCCTCACTGGTCACCATCACAGCAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 90 bp AGCTTGGACAGACCCTCCGGCTTGACCAGCTTGGGCAGACCCTCCTaGAGAGAAGAGTGGCTTCTGTCAGCTCATACCAGTCGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: SLDRPSGLTSLGRPS*REEWLLSAHTSRLC
Trigger: ACAGAGACGACTGGTATGAGCTGACAGAAGCCACTCTTCTCTGCAGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577530.1
CDS CCA 90 bp CAGCTTGGGCAGACCCTCCAGTCGTCTCTGTCGAGGTGCGGACGCTaGGCTGAGACTCAGCATGAGGTGAGGACATCTTTAAAGGATCCA +
Preference number: 5 (lower is better)
Translates to: QLGQTLQSSLSRCGR*AETQHEVRTSLKDP
Trigger: TGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 90 bp CTTGGTGAATCGGCTCTGCCTGGGCAGCAGGCGGGGTGGACCTGTTaGGTGTTTATGTCTTGGGTGTTTATGTCTTGGGGACTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: LGESALPGQQAGWTC*VFMSWVFMSWGLSP
Trigger: AGGGCTCAGTCCCCAAGACATAAACACCCAAGACATAAACACCCAACAGGTCCACCCCGCCTGCTGCCCAGGCAGAGCCGATTCACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392343.3
ENST00000582885.1
CDS CCA 90 bp GAAGCAGCAGCTCATTCAGGGCGGGCTCTGAGCCCAGTGGCAGCATaGTGGCCGTCTTTCTCTATCCTAATTCCCGTCTTGGTGAATCGG +
Preference number: 5 (lower is better)
Translates to: EAAAHSGRALSPVAA*WPSFSILIPVLVNR
Trigger: CCGATTCACCAAGACGGGAATTAGGATAGAGAAAGACGGCCACCATGCTGCCACTGGGCTCAGAGCCCGCCCTGAATGAGCTGCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp GGGTGGCGGTCTTGTCCGGGATCTCGGACTCGTCCAGGGTCTCGGTCTTGTTGGAGTGAGTGCCAGCCGTaGTGTGGGCATAGAATAAAT +
Preference number: 5 (lower is better)
Translates to: GWRSCPGSRTRPGSRSCWSECQP*CGHRIN
Trigger: ATTTATTCTATGCCCACACAACGGCTGGCACTCACT...CCAACAAGACCGAGACCCTGGACGAGTCCGAGATCCCGGACAAGACCGCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATTAGCTGCCTCTATCTaGAGCTCGCTCACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSLAASI*SSLTSA
Trigger: GGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTCAATCTCACCATTCTaGTCACTGTGGACGCGCTCC +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPSISPF*SLWTRS
Trigger: GGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTGCTGTGTTGCTCATGTaGTCAGCCTGCAGACGGAAT +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPAVLLM*SACRRN
Trigger: ATTCCGTCTGCAGGCTGACAACATGAGCAACACAGC...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp TCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCACAGGCAAGCTGTGTTGCTCATGTaGTCAGCCTGCAGACGGAAT +
Preference number: 5 (lower is better)
Translates to: SHLSSQGIQTATLAEHRQAVLLM*SACRRN
Trigger: ATTCCGTCTGCAGGCTGACAACATGAGCAACACAGC...TTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGTGCCAGGGACAGCTGTaGCTTGTACCTTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: SNAGRAQARTVSVAGTSACQGQL*LVPFNV
Trigger: GACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCA...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp AGCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGCCTCTCCCACCACATTaGATCACAGAAGTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SNAGRAQARTVSVAGTSAPLPPH*ITEVFL
Trigger: GAGGAAGACTTCTGTGATCAAATGTGGTGGGAGAGG...CGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS TCA 90 bp GGTGCTGTGGGGCTGTGCATCCAGCCTCATAAAATGTCACCAGCGTaGCCTGCTCTCTCAGTCACAGCTTGTCCTGAGAGCAGCAATGGG +
Preference number: 5 (lower is better)
Translates to: GAVGLCIQPHKMSPA*PALSVTACPESSNG
Trigger: CCCATTGCTGCTCTCAGGACAAGCTGTGACTGAGAGAGCAGGTCACGCTGGTGACATTTTATGAGGCTGGATGCACAGCCCCACAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS TCA 90 bp TCTTGGGTGTTTATGTCTTGGGGACTGAGCCCTCACCCTGTGGTCTaGCCTCTCTCCAGGCAGGCGGTGTTGGAACTGAACCGAAGGACA +
Preference number: 5 (lower is better)
Translates to: SWVFMSWGLSPHPVV*PLSRQAVLELNRRT
Trigger: TGTCCTTCGGTTCAGTTCCAACACCGCCTGCCTGGAGAGAGGTCAGACCACAGGGTGAGGGCTCAGTCCCCAAGACATAAACACCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392343.3
ENST00000582885.1
CDS CCA 90 bp CGCGTCACACCTCAGTACTTGGGTGGGTGTACACAATACGTGACCTaGTCCGTGGCCCGTGTGCAAATGTCACCAACCGTCCAGATAACG +
Preference number: 5 (lower is better)
Translates to: RVTPQYLGGCTQYVT*SVARVQMSPTVQIT
Trigger: CGTTATCTGGACGGTTGGTGACATTTGCACACGGGCCACGGACCAGGTCACGTATTGTGTACACCCACCCAAGTACTGAGGTGTGACGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATCAATCTCACCATTCTaGTCACTGTGGACGCGCTCC +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSSISPF*SLWTRS
Trigger: GGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCTGTGTTGCTCATGTaGTCAGCCTGCAGACGGAAT +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSAVLLM*SACRRN
Trigger: ATTCCGTCTGCAGGCTGACAACATGAGCAACACAGC...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp GCCCTCGTCCCACCTGAGCTCCCAGGGCATACAGACAGCAACGCTGGCAGAGCAAGAGCCTCCAGCTCTTaGTGCAGTAGTTTAACCTTA +
Preference number: 5 (lower is better)
Translates to: ALVPPELPGHTDSNAGRARASSS*CSSLTL
Trigger: TAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCT...TGCTCTGCCAGCGTTGCTGTCTGTATGCCCTGGGAGCTCAGGTGGGACGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp ACAAGGCTGTGTTGCTCATGTTGTCAGCCTGCAGACGGAATTCGTGCTCCCTCTGACTCTCTGCAGCCTTaGCCCCGGCTTCCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: TRLCCSCCQPADGIRAPSDSLQP*PRLPSE
Trigger: CTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTC...AGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGCATCTTCACGAAGTaGGTCAATGGCAGCGTCCTT +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPCIFTK*VNGSVL
Trigger: AAGGACGCTGCCATTGACCAACTTCGTGAAGATGCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp TGGAGCAGGGCCCACTTCCAGGCACGGCCTTCACTGCAGCCCTCGTCCCACCTGAGGCAGATTTTACAGTaGATGCATCTTCACGAAGTT +
Preference number: 5 (lower is better)
Translates to: WSRAHFQARPSLQPSSHLRQILQ*MHLHEV
Trigger: AACTTCGTGAAGATGCATCAACTGTAAAATCTGCCT...CAGGTGGGACGAGGGCTGCAGTGAAGGCCGTGCCTGGAAGTGGGCCCTGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTAGGGACAGCTGTTGCTaGTACCTTTCAATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRDSCC*YLSMSC
Trigger: GCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTTGCCAGGGACAGCTGTaGCTTGTACCTTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPCQGQL*LVPFNV
Trigger: GACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCA...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS TCA 90 bp GCAGCAACCTTTCAATGTCCTGCTGGGATCGGGCCACCTGTGCCTTaGGCTTCACCTCTTCTTCCTGCAGCGTCTGAATCTGAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: AATFQCPAGIGPPVP*ASPLLPAASESEGL
Trigger: GAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp GCTTGGCAGCAACCTTTCAATGTCCTGCTGGGATCGGGCCACCTGTaGCTTGAGCTTCACCTCTTCTTCCTGCAGCGTCTGAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: AWQQPFNVLLGSGHL*LELHLFFLQRLNLK
Trigger: CTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTTGCTGCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp CTCTCGCGTGGAAGAGTGCCCCGTTCCCCTGACCGATCTGTCCATTaGTATCAGCCTGGACCCATGATTTCCTGGTTGAGTCAGTGGATT +
Preference number: 5 (lower is better)
Translates to: LSRGRVPRSPDRSVH*YQPGPMISWLSQWI
Trigger: AATCCACTGACTCAACCAGGAAATCATGGGTCCAGGCTGATAGCAATGGACAGATCGGTCAGGGGAACGGGGCACTCTTCCACGCGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS-3UTR CAA 90 bp CTAGTGCAGTCTCAGCTCCGTAAGGGTGCTCAGCTTTGCTCAGGCCCTGCTTCCGCTCCTTTCTCCTCTTaGCCTGGCTTTGTGGAGTTT +
Preference number: 5 (lower is better)
Translates to: LVQSQLRKGAQLCSGPASAPFSS*PGFVEF
Trigger: AAACTCCACAAAGCCAGGCAAAGAGGAGAAAGGAGC...GGAAGCAGGGCCTGAGCAAAGCTGAGCACCCTTACGGAGCTGAGACTGCACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCATGCATCTTCACGAAGTaGGTCAATGGCAGCGTCCTT +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSCIFTK*VNGSVL
Trigger: AAGGACGCTGCCATTGACCAACTTCGTGAAGATGCA...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAAGGGACAGCTGTTGCTaGTACCTTTCAATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSRDSCC*YLSMSC
Trigger: GCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS-3UTR CAA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTGCCAGGGACAGCTGTaGCTTGTACCTTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGCQGQL*LVPFNV
Trigger: GACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCA...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS TCA 90 bp GCTTGTACCTTTCAATGTCCTGCTGGGATCGGGCCACCTGTGCCTTaGGCTTCACCTCTTCTTCCTGCAGCGTCTGAATCTGAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: ACTFQCPAGIGPPVP*ASPLLPAASESEGL
Trigger: GAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 90 bp GCGATGGGAGCTCTGATCACTCGGGTCAGCTGGGGTCAAACAGGCTaGTCCACTGGAAAGCCAGCATTTCCCTTGGAAATAAGAAGTCAC +
Preference number: 5 (lower is better)
Translates to: AMGALITRVSWGQTG*STGKPAFPLEIRSH
Trigger: GTGACTTCTTATTTCCAAGGGAAATGCTGGCTTTCCAGTGGAGCAGCCTGTTTGACCCCAGCTGACCCGAGTGATCAGAGCTCCCATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp CTGGGTCAGGCTGGTTTGCATCTGTGCTCTCTGCCGCTGTCTGGATaGGAGGAGGAATCTGATGGCTTAGAGCCTCCATTTCTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LGQAGLHLCSLPLSG*EEESDGLEPPFLSS
Trigger: TGAGGAAAGAAATGGAGGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1
CDS CCA 90 bp GCTTCTGTCAGCTCATACCAGTCGTCTCTGTCGAGGTGCGGACGCTaGGCTGAGACTCAGCATGAGGTGAGGACATCTTTAAAGGATCCA +
Preference number: 5 (lower is better)
Translates to: ASVSSYQSSLSRCGR*AETQHEVRTSLKDP
Trigger: TGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGACTGGTATGAGCTGACAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577530.1
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTAGAGCCTCCAGCTCTTaGTGCAGTAGTTTAACCTTA +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRASSS*CSSLTL
Trigger: TAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS TCA 90 bp TTTGCATCTGTGCTCTCTGCCGCTGTCTGGATGGGAGGAGGAATCTaGTGGCTTAGAGCCTCCATTTCTTTCCTCATCTGGGCAATCGCG +
Preference number: 5 (lower is better)
Translates to: FASVLSAAVWMGGGI*WLRASISFLIWAIA
Trigger: CGCGATTGCCCAGATGAGGAAAGAAATGGAGGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1
CDS TCA 90 bp CTTTGGTCTGCTGAAATGTCTTCACGTCCTGAGGACATGTATGAGTaGGTGACACAGGGAAGTCCTTCTCAGAGGCTGAGGCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: LWSAEMSSRPEDMYE*VTQGSPSQRLRPGP
Trigger: AGGCCCAGGCCTCAGCCTCTGAGAAGGACTTCCCTGTGTCACTCACTCATACATGTCCTCAGGACGTGAAGACATTTCAGCAGACCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 90 bp CTGTTGCTTGTACCTTTCAATGTCCTGCTGGGATCGGGCCACCTGTaGCTTGAGCTTCACCTCTTCTTCCTGCAGCGTCTGAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: LLLVPFNVLLGSGHL*LELHLFFLQRLNLK
Trigger: CTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 90 bp TCCTGGTTGAGTCAGTGGATTGTGGTCTTCAACGTCACTGCCTATTaGCCTAGTTCTGGTCCTTGGGGACCCCTTTCAGCTGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: SWLSQWIVVFNVTAY*PSSGPWGPLSAASC
Trigger: ACAGGAAGCAGCTGAAAGGGGTCCCCAAGGACCAGAACTAGGCCAATAGGCAGTGACGTTGAAGACCACAATCCACTGACTCAACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp GAGCACTGGTTCTTGGATTCCTGTAGCTTCAGTGACAAGGTGCTGTaGGGCTGTGCATCCAGCCTCATAAAATGTCACCAGCGTGACCTG +
Preference number: 5 (lower is better)
Translates to: EHWFLDSCSFSDKVL*GCASSLIKCHQRDL
Trigger: CAGGTCACGCTGGTGACATTTTATGAGGCTGGATGCACAGCCCCACAGCACCTTGTCACTGAAGCTACAGGAATCCAAGAACCAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp ATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCTTTGTGTCTTCGGGCCTaGCAGGGCGTCAAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: MTVCEVWKLFTLHAPFSSLCLRA*QGVKSA
Trigger: AGCAGACTTGACGCCCTGCAAGGCCCGAAGACACAA...AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACCGTGTGGATGCTGTGTaGTGTCTTCGGGCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANRVDAV*CLRALQ
Trigger: CTGCAAGGCCCGAAGACACAACACAGCATCCACACG...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACTCTGCAGTTTCCTCCTaGCGGGATTCTGCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: LAGASVCHDRVRGLEVVHSAVSS*RDSALK
Trigger: TTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGA...GTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp ATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCTCCGCCATGCCAGGCCTaGGATTTCTGTAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: MTVCEVWKLFTLHAPFSSPPCQA*DFCSCS
Trigger: ACTGCAGCTACAGAAATCCAAGGCCTGGCATGGCGG...AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp GAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGAGAGCCTCCAGCTCTTaGTGCAGTAGTTTAACCTTA +
Preference number: 5 (lower is better)
Translates to: EEPGFNGPCAQGGLQSAGRASSS*CSSLTL
Trigger: TAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCT...CCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS GCA 90 bp GACAAGGCTGTGTTGCTCATGTTGTCAGCCTGCAGACGGAATTCGTaGTCCCTCTTCCGCATTTTCGATTCAAACTCCAGCAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: DKAVLLMLSACRRNS*SLFRIFDSNSSSSS
Trigger: GGAACTGCTGCTGGAGTTTGAATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000578910.1
ENST00000581625.2
ENST00000665763.1
CDS GCA 90 bp ACCTTAAGCTCCCGGGACAAGGCTGTGTTGCTCATGTTGTCAGCCTaGAGACGGAATTCGTGCTCCCTCTTCCGCATTTTCGATTCAAAC +
Preference number: 5 (lower is better)
Translates to: TLSSRDKAVLLMLSA*RRNSCSLFRIFDSN
Trigger: GTTTGAATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGGAGCTTAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000578910.1
ENST00000581625.2
ENST00000665763.1
CDS CCA 90 bp TCCACTGGAAAGCCAGCATTTCCCTTGGAAATAAGAAGTCACGTGTaGGGAGATGCTGCTTCGCATCCGTCTGATGGGAATCCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: STGKPAFPLEIRSHV*GDAASHPSDGNPSG
Trigger: ACCAGAGGGATTCCCATCAGACGGATGCGAAGCAGCATCTCCCCACACGTGACTTCTTATTTCCAAGGGAAATGCTGGCTTTCCAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS-3UTR CAA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGGATACTGGGCCAGCTaGGACAGATCCTCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHGYWAS*DRSSCL
Trigger: CAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCC...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419322.6
CDS-3UTR CAA 90 bp GAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATCCTCCTGGTTCATGTTaGGGTGAAGGGCTCCACTCC +
Preference number: 5 (lower is better)
Translates to: ELQYVMTVCEVWKLFTLHPPGSC*GEGLHS
Trigger: GGAGTGGAGCCCTTCACCCAAACATGAACCAGGAGG...ATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTGCCCCAGGGTTCACCTaGCCTGTCTCCCTTCCAACA +
Preference number: 5 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIAPGFT*PVSLPT
Trigger: TGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGGC...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACGCTCCTTTCTCCTCTTaGCCTGGCTTTGTGGAGTTT +
Preference number: 5 (lower is better)
Translates to: LAGASVCHDRVRGLEVVHAPFSS*PGFVEF
Trigger: AAACTCCACAAAGCCAGGCAAAGAGGAGAAAGGAGC...GTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CCCGGGACAAGGCTGTGTTGCTCATGTTGTCAGCCTGCAGACGGAATTCGTGCTAGAGCCTCCAGCTCTTaGTGCAGTAGTTTAACCTTA +
Preference number: 5 (lower is better)
Translates to: PGTRLCCSCCQPADGIRARASSS*CSSLTL
Trigger: TAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCT...AGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581625.2
CDS-3UTR CAA 90 bp CCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAGCAGGGTCGCCTAGGCAGATTTTACAGTaGATGCATCTTCACGAAGTT +
Preference number: 5 (lower is better)
Translates to: PGFNGPCAQGGLQSAGSPRQILQ*MHLHEV
Trigger: AACTTCGTGAAGATGCATCAACTGTAAAATCTGCCT...AGGCGACCCTGCTGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS TCA 90 bp TTTATGGAAGGAGCAAGTGAGATGAAAGCAAAGACCAGCCTGGAATaGGCAGAAAAGGTAGAATCCCCCAGACTCCAGTCCTGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: FMEGASEMKAKTSLE*AEKVESPRLQSWPA
Trigger: CGCAGGCCAGGACTGGAGTCTGGGGGATTCTACCTTTTCTGCTCATTCCAGGCTGGTCTTTGCTTTCATCTCACTTGCTCCTTCCATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578187.1
ENST00000578910.1
CDS CCA 90 bp CAGAGCCTGGAGTGTATGCCCCGCCTGTGCCTTAGCTCCAATAACTaGGATTGGGCTGCAGGTGGCTTCATCTCTCAATTTAAAATTCTG +
Preference number: 5 (lower is better)
Translates to: QSLECMPRLCLSSNN*DWAAGGFISQFKIL
Trigger: CAGAATTTTAAATTGAGAGATGAAGCCACCTGCAGCCCAATCCCAGTTATTGGAGCTAAGGCACAGGCGGGGCATACACTCCAGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 90 bp CCTGACCGATCTGTCCATTGCTATCAGCCTGGACCCATGATTTCCTaGTTGAGTCAGTGGATTGTGGTCTTCAACGTCACTGCCTATTGG +
Preference number: 5 (lower is better)
Translates to: PDRSVHCYQPGPMIS*LSQWIVVFNVTAYW
Trigger: CCAATAGGCAGTGACGTTGAAGACCACAATCCACTGACTCAACCAGGAAATCATGGGTCCAGGCTGATAGCAATGGACAGATCGGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS-3UTR CAA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTCCCAGTGCTCCCTTCTaGGCCAGAGCACTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFPSAPF*ARALVL
Trigger: AAGAACCAGTGCTCTGGCCAAGAAGGGAGCACTGGG...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CCCAGGGAGGAACCTGGTTTTAATGGGCCCTGTGCTCAGGGAGGCCTTCAGTCAAGGCAGATTTTACAGTaGATGCATCTTCACGAAGTT +
Preference number: 5 (lower is better)
Translates to: PREEPGFNGPCAQGGLQSRQILQ*MHLHEV
Trigger: AACTTCGTGAAGATGCATCAACTGTAAAATCTGCCT...TGACTGAAGGCCTCCCTGAGCACAGGGCCCATTAAAACCAGGTTCCTCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389641.9
ENST00000392347.5
CDS GCA 90 bp ATTTCTTTCCTCATCTGGGCAATCGCGTTTCGCAAGCTCGTGTTCTaGTCTCGGAGCCGCTGGATCTCACTGGATGGAAAGTCTTTACTT +
Preference number: 5 (lower is better)
Translates to: ISFLIWAIAFRKLVF*SRSRWISLDGKSLL
Trigger: AAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1
CDS CCA 90 bp TGGGCAATCGCGTTTCGCAAGCTCGTGTTCTGCTCTCGGAGCCGCTaGATCTCACTGGATGGAAAGTCTTTACTTATTTCTTCTTCATGC +
Preference number: 5 (lower is better)
Translates to: WAIAFRKLVFCSRSR*ISLDGKSLLISSSC
Trigger: GCATGAAGAAGAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1
CDS CCA 90 bp GTCCATTGCTATCAGCCTGGACCCATGATTTCCTGGTTGAGTCAGTaGATTGTGGTCTTCAACGTCACTGCCTATTGGCCTAGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: VHCYQPGPMISWLSQ*IVVFNVTAYWPSSG
Trigger: ACCAGAACTAGGCCAATAGGCAGTGACGTTGAAGACCACAATCCACTGACTCAACCAGGAAATCATGGGTCCAGGCTGATAGCAATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS-3UTR CAA 90 bp GGAGCTCTTTTCTGCAGTTTCCTCCTTGCGGGATTCTGCCCTGAAATGCCGGCTTGGTCATCTATGCCTTaGTGTCTTTCAAGTGAACAC +
Preference number: 5 (lower is better)
Translates to: GALFCSFLLAGFCPEMPAWSSMP*CLSSEH
Trigger: GTGTTCACTTGAAAGACACAAAGGCATAGATGACCA...AGCCGGCATTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGAAAAGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR CAA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCAGGCGGCAGGACTGCTaGAGCCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: SGSHGFVTTISRKELTDIRRQDC*SPGVRD
Trigger: GTCTCGAACTCCTGGGCTCAAGCAGTCCTGCCGCCT...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CTGGCTGGAGCTTCAGTATGTCATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCCTCTTTGCCTGGCTTaGTGGAGTTTTCTTCTATAC +
Preference number: 5 (lower is better)
Translates to: LAGASVCHDRVRGLEVVHPLCLA*WSFLLY
Trigger: GTATAGAAGAAAACTCCACAAAGCCAGGCAAAGAGG...GTGAACAACTTCCAGACCTCGCACACGGTCATGACATACTGAAGCTCCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp ATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCTTGCGAGGTCTGGAAGTaGTTCACCTTACATGCTCCT +
Preference number: 5 (lower is better)
Translates to: MTVCEVWKLFTLHAPFSSCEVWK*FTLHAP
Trigger: AGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCA...AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp TGTGGAGTTTTCTTCTATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGCCGCCATGCCAGGCCTaGGATTTCTGTAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: CGVFFYTCTGWSSVQTQEPPCQA*DFCSCS
Trigger: ACTGCAGCTACAGAAATCCAAGGCCTGGCATGGCGG...CTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATAGAAGAAAACTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 90 bp CGCTGGATCTCACTGGATGGAAAGTCTTTACTTATTTCTTCTTCATaGTGCCTGAGAAGCATCTATGACCCGGAAGCCTCCTCCCCACTT +
Preference number: 5 (lower is better)
Translates to: RWISLDGKSLLISSS*CLRSIYDPEASSPL
Trigger: AAGTGGGGAGGAGGCTTCCGGGTCATAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577530.1
CDS CCA 90 bp TTTCTCTCCAGTGTCCATTTTAGATTTTCATACTGTTCCCGGTGGTaGTCAATCTCACCATTCTTGTCACTGTGGACGCGCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FLSSVHFRFSYCSRW*SISPFLSLWTRSSS
Trigger: GGAGCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGACACTGGAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS-3UTR CAA 90 bp AGAAGCAGAAGTGAGTGCCAGCCGTTGTGTGGGCATAGAATAAATATTATCAGACGTGTGGATGCTGTGTaGTGTCTTCGGGCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: RSRSECQPLCGHRINIIRRVDAV*CLRALQ
Trigger: CTGCAAGGCCCGAAGACACAACACAGCATCCACACG...TCTGATAATATTTATTCTATGCCCACACAACGGCTGGCACTCACTTCTGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp TTTCTAGTTGTTCATGGAGGAACATTAAAGTCTGGTCCTTGTAACTACGGCCTGGAGCCTGGGGTGGCTTaGGGGACCTGTCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: FLVVHGGTLKSGPCNYGLEPGVA*GTCLLS
Trigger: AGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCTC...CAGGCCGTAGTTACAAGGACCAGACTTTAATGTTCCTCCATGAACAACTAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp ATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTTTCCATAGGCCCTCTCTaGGTGAGGCCCTGTAACAAA +
Preference number: 5 (lower is better)
Translates to: IHVQAGPQYRLKRTLCRFSIGPL*VRPCNK
Trigger: TTTGTTACAGGGCCTCACCAAGAGAGGGCCTATGGA...AAATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS-3UTR CAA 90 bp CGGTCTTGTTGGGGATCTCGGTCTTGTTTGACCAGTTGTCCAATGTCTGCAAACAGTGAGTGCCAGCCGTaGTGTGGGCATAGAATAAAT +
Preference number: 5 (lower is better)
Translates to: RSCWGSRSCLTSCPMSANSECQP*CGHRIN
Trigger: ATTTATTCTATGCCCACACAACGGCTGGCACTCACT...GTTTGCAGACATTGGACAACTGGTCAAACAAGACCGAGATCCCCAACAAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGGGAGGAGCTGTGGGATaGGCGACCATGCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLGGAVG*ATMLLR
Trigger: CCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCC...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCCCTCCTGGTTCATGTTaGGGTGAAGGGCTCCACTCC +
Preference number: 5 (lower is better)
Translates to: SGSHGFVTTISRKELTDIPPGSC*GEGLHS
Trigger: GGAGTGGAGCCCTTCACCCAAACATGAACCAGGAGG...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp AGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCCCGCGCTGCATGTTTTaGCACACTGAGGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SGSHGFVTTISRKELTDIPRCMF*HTEELP
Trigger: AGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCGG...GATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp ATGACCGTGTGCGAGGTCTGGAAGTTGTTCACCTTACATGCTCCTTTCTCCTCTCCTCTTTGCCTGGCTTaGTGGAGTTTTCTTCTATAC +
Preference number: 5 (lower is better)
Translates to: MTVCEVWKLFTLHAPFSSPLCLA*WSFLLY
Trigger: GTATAGAAGAAAACTCCACAAAGCCAGGCAAAGAGG...AGAGGAGAAAGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCACACGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp TATACATGTACAGGCTGGTCCTCAGTACAGACTCAAGAGAACCCTGTGCAGATTGGATCTCGGTCTTGTTaGACCAGTTGTCCAATGTCT +
Preference number: 5 (lower is better)
Translates to: YTCTGWSSVQTQENPVQIGSRSC*TSCPMS
Trigger: AGACATTGGACAACTGGTCAAACAAGACCGAGATCC...AATCTGCACAGGGTTCTCTTGAGTCTGTACTGAGGACCAGCCTGTACATGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGCCCCAGGGTTCACCTaGCCTGTCTCCCTTCCAACA +
Preference number: 5 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKAPGFT*PVSLPT
Trigger: TGTTGGAAGGGAGACAGGCAAGGTGAACCCTGGGGC...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS CCA 90 bp CTGGGAATGGGATGGGGACAGAGTTTGTTCTCTGTGCATCACTTCTaGATTCCTCTTGTGTTGAATGCAAACACTCAGAAAGAACAGCAT +
Preference number: 5 (lower is better)
Translates to: LGMGWGQSLFSVHHF*IPLVLNANTQKEQH
Trigger: ATGCTGTTCTTTCTGAGTGTTTGCATTCAACACAAGAGGAATCCAGAAGTGATGCACAGAGAACAAACTCTGTCCCCATCCCATTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483145.1
CDS-3UTR CAA 90 bp CAAGTTACTTTCCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCCTGGGGTGGCTTaGGGGACCTGTCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: QVTFLSGSHGFVTTISRKEPGVA*GTCLLS
Trigger: AGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCTC...TTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGGAAAGTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp CCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGATCTGCAGTTTCCTCCTaGCGGGATTCTGCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: PKWQSWFRHYNFKKRANRSAVSS*RDSALK
Trigger: TTTCAGGGCAGAATCCCGCAAGGAGGAAACTGCAGA...TCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS-3UTR CAA 90 bp AGAAGCAGAAGTGAGTGCCAGCCGTTGTGTGGGCATAGAATAAATATTATCAGAGGATCTCGGTCTTGTTaGACCAGTTGTCCAATGTCT +
Preference number: 5 (lower is better)
Translates to: RSRSECQPLCGHRINIIRGSRSC*TSCPMS
Trigger: AGACATTGGACAACTGGTCAAACAAGACCGAGATCC...TCTGATAATATTTATTCTATGCCCACACAACGGCTGGCACTCACTTCTGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS CCA 90 bp ACTTTGTGCTTTCCAGACATCATCTACTGTCCCCAAAACCTTCTGTaGATTCATAGGTCACTATTGGTAACTATAGGTTACCACAGGTCA +
Preference number: 5 (lower is better)
Translates to: TLCFPDIIYCPQNLL*IHRSLLVTIGYHRS
Trigger: TGACCTGTGGTAACCTATAGTTACCAATAGTGACCTATGAATCCACAGAAGGTTTTGGGGACAGTAGATGATGTCTGGAAAGCACAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS-3UTR CAA 90 bp TTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACATCTACTTGACCATCTGTGCGAGGTCTGGAAGTaGTTCACCTTACATGCTCCT +
Preference number: 5 (lower is better)
Translates to: FRHYNFKKRANRHLLDHLCEVWK*FTLHAP
Trigger: AGGAGCATGTAAGGTGAACAACTTCCAGACCTCGCA...CAGATGGTCAAGTAGATGTCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS TCA 90 bp GACAGAGTTTGTTCTCTGTGCATCACTTCTGGATTCCTCTTGTGTTaGATGCAAACACTCAGAAAGAACAGCATGTTCCTTTTCAAAACC +
Preference number: 5 (lower is better)
Translates to: DRVCSLCITSGFLLC*MQTLRKNSMFLFKT
Trigger: GGTTTTGAAAAGGAACATGCTGTTCTTTCTGAGTGTTTGCATTCAACACAAGAGGAATCCAGAAGTGATGCACAGAGAACAAACTCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483145.1
CDS-3UTR CAA 90 bp TTTCTAGTTGTTCATGGAGGAACATTAAAGTCTGGTCCTTGTAACTACGGCCTGCTAACAGACATCTACTaGACCATCTGTTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: FLVVHGGTLKSGPCNYGLLTDIY*TICFSE
Trigger: TTCTGAGAAACAGATGGTCAAGTAGATGTCTGTTAG...CAGGCCGTAGTTACAAGGACCAGACTTTAATGTTCCTCCATGAACAACTAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 90 bp GAGTTTGTTCTCTGTGCATCACTTCTGGATTCCTCTTGTGTTGAATaGAAACACTCAGAAAGAACAGCATGTTCCTTTTCAAAACCAAAG +
Preference number: 5 (lower is better)
Translates to: EFVLCASLLDSSCVE*KHSERTACSFSKPK
Trigger: CTTTGGTTTTGAAAAGGAACATGCTGTTCTTTCTGAGTGTTTGCATTCAACACAAGAGGAATCCAGAAGTGATGCACAGAGAACAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483145.1
CDS-3UTR CAA 90 bp CCTAAGTGGCAGTCATGGTTTCGTCACTACAATTTCAAGAAAAGAGCTAACAGACTAACAGACATCTACTaGACCATCTGTTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: PKWQSWFRHYNFKKRANRLTDIY*TICFSE
Trigger: TTCTGAGAAACAGATGGTCAAGTAGATGTCTGTTAG...TCTGTTAGCTCTTTTCTTGAAATTGTAGTGACGAAACCATGACTGCCACTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS CCA 72 bp CTCGCGCACCGGGCGCGGCTCATGGCCTCCAGGTCCTaGAGCTCCCCGGCTCGGCTCTGGAGCTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LAHRARLMASRS*SSPARLWSFLS
Trigger: GGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGTGCGCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578187.1
ENST00000578910.1
CDS TCA 72 bp GGCCACGGCGTCCGAGGCTGGGGGCTGCTTCCTGCCTaGAGGCTCCGCTCCCCCGTGCTGGGCTATCCTGAG +
Preference number: 6 (lower is better)
Translates to: GHGVRGWGLLPA*RLRSPVLGYPE
Trigger: CTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGACGCCGTGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000665763.1
CDS TCA 72 bp GGCCTGCGAGGCTGCCACAGAGCACGCCTCGGGAGATaGAGGACTCGCGCACCGGGCGCGGCTCATGGCCTC +
Preference number: 6 (lower is better)
Translates to: GLRGCHRARLGR*RTRAPGAAHGL
Trigger: GAGGCCATGAGCCGCGCCCGGTGCGCGAGTCCTTCATCTCCCGAGGCGTGCTCTGTGGCAGCCTCGCAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578187.1
ENST00000578910.1
CDS GCA 72 bp CAAGGGCCACGGCGTCCGAGGCTGGGGGCTGCTTCCTaGCTGAAGGCTCCGCTCCCCCGTGCTGGGCTATCC +
Preference number: 6 (lower is better)
Translates to: QGPRRPRLGAAS*LKAPLPRAGLS
Trigger: GGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGACGCCGTGGCCCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000665763.1
CDS GCA 72 bp ACGCAAGGGCCAACAGTGAGAGCTCCTGGGGCCCCTTaGTGCCCAAGGAGGCGCCCGCCCGTGTCCGGGAAC +
Preference number: 6 (lower is better)
Translates to: TQGPTVRAPGAP*CPRRRPPVSGN
Trigger: GTTCCCGGACACGGGCGGGCGCCTCCTTGGGCAGCAAGGGGCCCCAGGAGCTCTCACTGTTGGCCCTTGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp GTGGGCCTCGCCTGGGTGGAGAGCCCGGCCACAGGATaGTCAGACCCAGGAGGAGCCTGGAGCCCGACTGTC +
Preference number: 6 (lower is better)
Translates to: VGLAWVESPATG*SDPGGAWSPTV
Trigger: GACAGTCGGGCTCCAGGCTCCTCCTGGGTCTGAGCATCCTGTGGCCGGGCTCTCCACCCAGGCGAGGCCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp GTCGCCCGGCGCGCCGTTCCTGTCGCGTTCCTTGGCTaGCACTCTCGCGTGGAAGAGTGCCCCGTTCCCCTG +
Preference number: 6 (lower is better)
Translates to: VARRAVPVAFLG*HSRVEECPVPL
Trigger: CAGGGGAACGGGGCACTCTTCCACGCGAGAGTGCCAGCCAAGGAACGCGACAGGAACGGCGCGCCGGGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp CGTGGTCGCCCGGCGCGCCGTTCCTGTCGCGTTCCTTaGCTGGCACTCTCGCGTGGAAGAGTGCCCCGTTCC +
Preference number: 6 (lower is better)
Translates to: RGRPARRSCRVP*LALSRGRVPRS
Trigger: GGAACGGGGCACTCTTCCACGCGAGAGTGCCAGCCAAGGAACGCGACAGGAACGGCGCGCCGGGCGACCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 72 bp CCGTGGTCGCCCGGCGCGCCGTTCCTGTCGCGTTCCTaGGCTGGCACTCTCGCGTGGAAGAGTGCCCCGTTC +
Preference number: 6 (lower is better)
Translates to: PWSPGAPFLSRS*AGTLAWKSAPF
Trigger: GAACGGGGCACTCTTCCACGCGAGAGTGCCAGCCAAGGAACGCGACAGGAACGGCGCGCCGGGCGACCACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp TGCAGAGCCGCCTCCTGCAGCTGGGTGCGGTGTGCCTaGAGCGCCCTCCACTCCTCCTCCTTGCGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: CRAASCSWVRCA*SALHSSSLRSS
Trigger: GCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 72 bp GTCCTGCAGAGCCGCCTCCTGCAGCTGGGTGCGGTGTaGCTGCAGCGCCCTCCACTCCTCCTCCTTGCGAAG +
Preference number: 6 (lower is better)
Translates to: VLQSRLLQLGAV*LQRPPLLLLAK
Trigger: CTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 72 bp AGGTGTACCTGGTCCACCTCACGGGGAAGCTCACGCTaGAGAGCGGCCGGCTCCAGGGGTTCCCGCAGCACC +
Preference number: 6 (lower is better)
Translates to: RCTWSTSRGSSR*RAAGSRGSRST
Trigger: GGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000665763.1
CDS CCA 72 bp TGCAGGCACCGCAGTTTCCCCTGCGCCTCCTCCAGCTaGCTCCGTGTGTCCTGCAGAGCCGCCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: CRHRSFPCASSS*LRVSCRAASCS
Trigger: GCTGCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 72 bp CTCCGGGCTCTCTGGGTGCCCCTGGGCACACCTACGTaGCTTCCTAGGGCGGAGGCTGCATCACGGAAGGCG +
Preference number: 6 (lower is better)
Translates to: LRALWVPLGTPT*LPRAEAASRKA
Trigger: CGCCTTCCGTGATGCAGCCTCCGCCCTAGGAAGCCACGTAGGTGTGCCCAGGGGCACCCAGAGAGCCCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582100.1
CDS TCA 72 bp TCACAGCGGCGCTGCCAGTCCAGGCCCAGCTGCACCTaGTCACGCTCCAGGCTCCGCTCCCTTTCCACTGCC +
Preference number: 6 (lower is better)
Translates to: SQRRCQSRPSCT*SRSRLRSLSTA
Trigger: GGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 72 bp GGCAAGGACGGTTTCTGTGGCAGGAACCTCGGCGGGTaGCAGGAGGAGCTAGCGGGCACCCACCTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: GKDGFCGRNLGG*QEELAGTHLSP
Trigger: GGGAGAGAGGTGGGTGCCCGCTAGCTCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327026.7
ENST00000392343.3
CDS CCA 72 bp TGCTTGGCAGAGGACAGAGCCCAGGTGGGCCTCGCCTaGGTGGAGAGCCCGGCCACAGGATGCTCAGACCCA +
Preference number: 6 (lower is better)
Translates to: CLAEDRAQVGLA*VESPATGCSDP
Trigger: TGGGTCTGAGCATCCTGTGGCCGGGCTCTCCACCCAGGCGAGGCCCACCTGGGCTCTGTCCTCTGCCAAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 90 bp ACAGTGAACTACGCAAGGGCCAACAGTGAGAGCTCCTGGGGCCCCTaGCTGCCCAAGGAGGCGCCCGCCCGTGTCCGGGAACACATGGCG +
Preference number: 6 (lower is better)
Translates to: TVNYARANSESSWGP*LPKEAPARVREHMA
Trigger: CGCCATGTGTTCCCGGACACGGGCGGGCGCCTCCTTGGGCAGCAAGGGGCCCCAGGAGCTCTCACTGTTGGCCCTTGCGTAGTTCACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 90 bp CTAGGGCGGAGGCTGCATCACGGAAGGCGGGCACACAGGCCTCACTaGGGCGAGAAGAGACCCAGAGACGCATGGCCTTCCTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LGRRLHHGRRAHRPH*GEKRPRDAWPSSWA
Trigger: GGCCCAGGAGGAAGGCCATGCGTCTCTGGGTCTCTTCTCGCCCAAGTGAGGCCTGTGTGCCCGCCTTCCGTGATGCAGCCTCCGCCCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582100.1
CDS CAA 90 bp GGAGCTCGGAGGCTGCATCACGGAAGGCGGGCACACAGGCCTCACTaGGGCGAGAAGAGACCCAGAGACGCATGGCCTTCCTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: GARRLHHGRRAHRPH*GEKRPRDAWPSSWA
Trigger: GGCCCAGGAGGAAGGCCATGCGTCTCTGGGTCTCTTCTCGCCCAAGTGAGGCCTGTGTGCCCGCCTTCCGTGATGCAGCCTCCGAGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584717.1
CDS GCA 72 bp GAAGGCTCCGCTCCCCCGTGCTGGGCTATCCTGAGATaGTTCCCCAGCTCAGCCACCTGCTTCCGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: EGSAPPCWAILR*FPSSATCFRSS
Trigger: GGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000665763.1
CDS GCA 72 bp CCAAAGCCAGGCTGTGCGGCTCAGCCCAGTGGGACCTaGCTGGGAGCAGAGTGCCCCACTGTTGTCCACAGG +
Preference number: 6 (lower is better)
Translates to: PKPGCAAQPSGT*LGAECPTVVHR
Trigger: CCTGTGGACAACAGTGGGGCACTCTGCTCCCAGGCAGGTCCCACTGGGCTGAGCCGCACAGCCTGGCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp CTCCATGGCGTCTCTGCGCCTCCGTTTGACTCCAGCTaGACGGCACACGGGGCGAGGTTAGCATCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: LHGVSAPPFDSS*TAHGARLASGA
Trigger: GGCCCCTGATGCTAACCTCGCCCCGTGTGCCGTGCAGCTGGAGTCAAACGGAGGCGCAGAGACGCCATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS GCA 72 bp CCCTGTGAGGCTGCCCTCATGGGAGGACGCCAGGGGTaGCCACCCAAGGAGCCTCTTCACCTGCTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: PCEAALMGGRQG*PPKEPLHLLFQ
Trigger: CTGGAAGAGCAGGTGAAGAGGCTCCTTGGGTGGGCACCCCTGGCGTCCTCCCATGAGGGCAGCCTCACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS GCA 72 bp CTGCTCCACGTGGGCTCCCTTCACCGCCACCAGCACTaGATCCTTCTCCCTGGCCAGACGGTCGAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: LLHVGSLHRHQH*ILLPGQTVELL
Trigger: GAGGAGCTCGACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000578187.1
ENST00000578910.1
ENST00000665763.1
CDS GCA 72 bp GTCCTTCTCCTTGGCGGTGTCAGCCTGTCTCCACTCTaGCCTGCGGAGCTGCGCCTCGAGGGTCTCGCAGTG +
Preference number: 6 (lower is better)
Translates to: VLLLGGVSLSPL*PAELRLEGLAV
Trigger: CACTGCGAGACCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000578187.1
ENST00000578910.1
ENST00000665763.1
CDS CCA 72 bp ACAGTGAACTACGCAAGGGCCAACAGTGAGAGCTCCTaGGGCCCCTTGCTGCCCAAGGAGGCGCCCGCCCGT +
Preference number: 6 (lower is better)
Translates to: TVNYARANSESS*GPLLPKEAPAR
Trigger: ACGGGCGGGCGCCTCCTTGGGCAGCAAGGGGCCCCAGGAGCTCTCACTGTTGGCCCTTGCGTAGTTCACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 90 bp CTGGAGCCCACGTGCTCCTTACCAAGCTCGCCTCCTGGTTCATGTTaGGGTGAAGGGCTCCACTCCACGCCAGGCTGGGCGTGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: LEPTCSLPSSPPGSC*GEGLHSTPGWAWGP
Trigger: TGGGCCCCACGCCCAGCCTGGCGTGGAGTGGAGCCCTTCACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACGTGGGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS TCA 72 bp GCTTGTCACCCTCCATGGCGTCTCTGCGCCTCCGTTTaGCTCCAGCTGCACGGCACACGGGGCGAGGTTAGC +
Preference number: 6 (lower is better)
Translates to: ACHPPWRLCASV*LQLHGTRGEVS
Trigger: GCTAACCTCGCCCCGTGTGCCGTGCAGCTGGAGTCAAACGGAGGCGCAGAGACGCCATGGAGGGTGACAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS GCA 72 bp CTGAGAAGCATCTGTGCCCCTGGTCTGGGGAGCCCATaGATCCTCAGGGCCTGCACGGCCTGGTCTCGTTCC +
Preference number: 6 (lower is better)
Translates to: LRSICAPGLGSP*ILRACTAWSRS
Trigger: GGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 72 bp GGCGGCATCTCCCCCAGCCTCTGGGTCAGGCTGGTTTaGATCTGTGCTCTCTGCCGCTGTCTGGATGGGAGG +
Preference number: 6 (lower is better)
Translates to: GGISPSLWVRLV*ICALCRCLDGR
Trigger: CCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGCTGGGGGAGATGCCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1
CDS GCA 72 bp GGAACACGTGCCTCCGCACACACCTGGTCCCAGCTTTaGAGACCTGGCTCCTTGGCTAGGGCCGTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: GTRASAHTWSQL*RPGSLARAVEG
Trigger: CCCTTCCACGGCCCTAGCCAAGGAGCCAGGTCTGCAAAGCTGGGACCAGGTGTGTGCGGAGGCACGTGTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp TGCAGCTCCAGAACCCTGGTCTGCAGCTCCTGCAGCTaGTCCACGTGGGCTCCCTTCACCGCCACCAGCACT +
Preference number: 6 (lower is better)
Translates to: CSSRTLVCSSCS*STWAPFTATST
Trigger: AGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000578187.1
ENST00000578910.1
ENST00000665763.1
CDS CCA 72 bp GCAACGCTGGCAGAGCACAGGCAAGGACGGTTTCTGTaGCAGGAACCTCGGCGGGTGGCAGGAGGAGCTAGC +
Preference number: 6 (lower is better)
Translates to: ATLAEHRQGRFL*QEPRRVAGGAS
Trigger: GCTAGCTCCTCCTGCCACCCGCCGAGGTTCCTGCCACAGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327026.7
ENST00000392343.3
CDS CCA 72 bp GCGCCCGCCCGTGTCCGGGAACACATGGCGCTCAGGTaGGTGGGAGATGTGTGGGGGTACAGACATGCTTAC +
Preference number: 6 (lower is better)
Translates to: APARVREHMALR*VGDVWGYRHAY
Trigger: GTAAGCATGTCTGTACCCCCACACATCTCCCACCCACCTGAGCGCCATGTGTTCCCGGACACGGGCGGGCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp TCTGGGCTCCTTTCCCAGCAGCAAGCAGCAAGGACCTaGGCCCGCCCTCGTCTCCAGGAGCTCAGCCATGCT +
Preference number: 6 (lower is better)
Translates to: SGLLSQQQAART*ARPRLQELSHA
Trigger: AGCATGGCTGAGCTCCTGGAGACGAGGGCGGGCCCAGGTCCTTGCTGCTTGCTGCTGGGAAAGGAGCCCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp AGGGTGCCACTGGCAAAGGAGGAGGAGCTGTGGGATTaGCGACCATGCTCCTCAGGGTGCTGGGGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: RVPLAKEEELWD*RPCSSGCWGAW
Trigger: CCAGGCTCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTTTGCCAGTGGCACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000389641.9
ENST00000392345.6
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 72 bp AAAGGAGGAAGAGGCCCCCAGGTAGGTGCGTGCTTCTaGACCTGGCGCTCGGCACACTGTGAGGATGGGCGG +
Preference number: 6 (lower is better)
Translates to: KGGRGPQVGACF*TWRSAHCEDGR
Trigger: CCGCCCATCCTCACAGTGTGCCGAGCGCCAGGTCCAGAAGCACGCACCTACCTGGGGGCCTCTTCCTCCTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS CCA 72 bp CGTGCCACTGACCGGAGGTGCAGGAAAAGCTCCCCCTaGTCCTCGGCCTCCATAGGCCCTCTCTTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: RATDRRCRKSSP*SSASIGPLLVR
Trigger: CCTCACCAAGAGAGGGCCTATGGAGGCCGAGGACCAGGGGGAGCTTTTCCTGCACCTCCGGTCAGTGGCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392346.6
ENST00000419322.6
ENST00000665763.1
CDS CCA 72 bp TCACTGTGGACGCGCTCCAGCTCCAGGCGATGCTCCTaGAATGCCAGCTGCTGCTGCTGCTGCAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SLWTRSSSRRCS*NASCCCCCSSS
Trigger: GGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGGAGCTGGAGCGCGTCCACAGTGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CAA 90 bp CGTGCCTCCGCACACACCTGGTCCCAGCTTTGCAGACCTGGCTCCTaGGCTAGGGCCGTGGAAGGGGACCAGCTTTCGTCAGGAGTGCTG +
Preference number: 6 (lower is better)
Translates to: RASAHTWSQLCRPGS*ARAVEGDQLSSGVL
Trigger: CAGCACTCCTGACGAAAGCTGGTCCCCTTCCACGGCCCTAGCCAAGGAGCCAGGTCTGCAAAGCTGGGACCAGGTGTGTGCGGAGGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 72 bp AGCGCCTGGAACTGTGGAACTGGCATCTGCTGTGGCTaGGTCCGGGCTGTGGGCCCTCTCAGGACAGAGCTG +
Preference number: 6 (lower is better)
Translates to: SAWNCGTGICCG*VRAVGPLRTEL
Trigger: CAGCTCTGTCCTGAGAGGGCCCACAGCCCGGACTCAGCCACAGCAGATGCCAGTTCCACAGTTCCAGGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 72 bp GACACGGGCGCATCCCAGCACTGGCGATGGGAGCTCTaGTCACTCGGGTCAGCTGGGGTCAAACAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: DTGASQHWRWEL*SLGSAGVKQAA
Trigger: AGCAGCCTGTTTGACCCCAGCTGACCCGAGTGATCAGAGCTCCCATCGCCAGTGCTGGGATGCGCCCGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 72 bp CTCCTTACCAAGCTCGCCTCCTGGTTCATGTTTGGGTaGAGGGCTCCACTCCACGCCAGGCTGGGCGTGGGG +
Preference number: 6 (lower is better)
Translates to: LLTKLASWFMFG*RAPLHARLGVG
Trigger: CCCCACGCCCAGCCTGGCGTGGAGTGGAGCCCTTCACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 72 bp GGACCCCTTTCAGCTGCTTCCTGTGCCTTCCGAACCTaGCTCCATGCTAGAGCCCGGGCTCCTGTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: GPLSAASCAFRT*LHARARAPVSR
Trigger: CCTGCTCACAGGAGCCCGGGCTCTAGCATGGAGGCAGGTTCGGAAGGCACAGGAAGCAGCTGAAAGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp CTAGGGCCGTGGAAGGGGACCAGCTTTCGTCAGGAGTaGTGTGGGACAGTCCCTGGACCCCTGTGCACTTCC +
Preference number: 6 (lower is better)
Translates to: LGPWKGTSFRQE*CGTVPGPLCTS
Trigger: GGAAGTGCACAGGGGTCCAGGGACTGTCCCACAGCACTCCTGACGAAAGCTGGTCCCCTTCCACGGCCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp CGCCAGAAAGGAGGAAGAGGCCCCCAGGTAGGTGCGTaGTTCTGGACCTGGCGCTCGGCACACTGTGAGGAT +
Preference number: 6 (lower is better)
Translates to: RQKGGRGPQVGA*FWTWRSAHCED
Trigger: ATCCTCACAGTGTGCCGAGCGCCAGGTCCAGAAGCACGCACCTACCTGGGGGCCTCTTCCTCCTTTCTGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS CCA 72 bp CAGCTCAGAGCTGTGGCTCAAACCCAGCCATGGAGTTaGGGGTCACTCCCTCGGGGCCAAGGGCCTGACCAA +
Preference number: 6 (lower is better)
Translates to: QLRAVAQTQPWS*GSLPRGQGPDQ
Trigger: TTGGTCAGGCCCTTGGCCCCGAGGGAGTGACCCCCAACTCCATGGCTGGGTTTGAGCCACAGCTCTGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp CATGCCAAGGCAGCTCTGGCCTGCTCCTCACTGTCCTaGAGCCTGAGACAGCCACGGCCGCATCTTCCTCAG +
Preference number: 6 (lower is better)
Translates to: HAKAALACSSLS*SLRQPRPHLPQ
Trigger: CTGAGGAAGATGCGGCCGTGGCTGTCTCAGGCTCCAGGACAGTGAGGAGCAGGCCAGAGCTGCCTTGGCATG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327026.7
ENST00000475635.1
CDS CCA 72 bp CCGCCCGTGTCCGGGAACACATGGCGCTCAGGTGGGTaGGAGATGTGTGGGGGTACAGACATGCTTACCCCT +
Preference number: 6 (lower is better)
Translates to: PPVSGNTWRSGG*EMCGGTDMLTP
Trigger: AGGGGTAAGCATGTCTGTACCCCCACACATCTCCCACCCACCTGAGCGCCATGTGTTCCCGGACACGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp AGCCCGGCCACAGGATGCTCAGACCCAGGAGGAGCCTaGAGCCCGACTGTCGCCTCCATGCATGTAGACACA +
Preference number: 6 (lower is better)
Translates to: SPATGCSDPGGA*SPTVASMHVDT
Trigger: TGTGTCTACATGCATGGAGGCGACAGTCGGGCTCCAGGCTCCTCCTGGGTCTGAGCATCCTGTGGCCGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp GCCGTGGAAGGGGACCAGCTTTCGTCAGGAGTGCTGTaGGACAGTCCCTGGACCCCTGTGCACTTCCTCACC +
Preference number: 6 (lower is better)
Translates to: AVEGDQLSSGVL*DSPWTPVHFLT
Trigger: GGTGAGGAAGTGCACAGGGGTCCAGGGACTGTCCCACAGCACTCCTGACGAAAGCTGGTCCCCTTCCACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp CCCAGCTTTGCAGACCTGGCTCCTTGGCTAGGGCCGTaGAAGGGGACCAGCTTTCGTCAGGAGTGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: PSFADLAPWLGP*KGTSFRQECCG
Trigger: CCCACAGCACTCCTGACGAAAGCTGGTCCCCTTCCACGGCCCTAGCCAAGGAGCCAGGTCTGCAAAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp TCCTGGAGGGTGCCACTGGCAAAGGAGGAGGAGCTGTaGGATTGGCGACCATGCTCCTCAGGGTGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: SWRVPLAKEEEL*DWRPCSSGCWG
Trigger: TCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCCTCCTTTGCCAGTGGCACCCTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000389641.9
ENST00000392345.6
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 72 bp GGCTGCATCACGGAAGGCGGGCACACAGGCCTCACTTaGGCGAGAAGAGACCCAGAGACGCATGGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: GCITEGGHTGLT*ARRDPETHGLP
Trigger: AGGAAGGCCATGCGTCTCTGGGTCTCTTCTCGCCCAAGTGAGGCCTGTGTGCCCGCCTTCCGTGATGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582100.1
ENST00000584717.1
CDS CAA 72 bp AGGCTGCATCACGGAAGGCGGGCACACAGGCCTCACTaGGGCGAGAAGAGACCCAGAGACGCATGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: RLHHGRRAHRPH*GEKRPRDAWPS
Trigger: GGAAGGCCATGCGTCTCTGGGTCTCTTCTCGCCCAAGTGAGGCCTGTGTGCCCGCCTTCCGTGATGCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582100.1
ENST00000584717.1
CDS CAA 90 bp GTCCCCGAGCTTCCTGAGTGCCAGTCCAGAGGATACTGGGCCAGCTaGGACAGATCCTCCTGCTTGACCAGCTTGGACAGACCCTCCGGC +
Preference number: 6 (lower is better)
Translates to: VPELPECQSRGYWAS*DRSSCLTSLDRPSG
Trigger: GCCGGAGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000577530.1
ENST00000665763.1
CDS TCA 72 bp AGGTGCGTGCTTCTGGACCTGGCGCTCGGCACACTGTaGGGATGGGCGGATGGAGTTGGTCTGCAGGTTCCA +
Preference number: 6 (lower is better)
Translates to: RCVLLDLALGTL*GWADGVGLQVP
Trigger: TGGAACCTGCAGACCAACTCCATCCGCCCATCCTCACAGTGTGCCGAGCGCCAGGTCCAGAAGCACGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS TCA 72 bp TGGTCTGACCTCTCTCCAGGCAGGCGGTGTTGGAACTaGACCGAAGGACACCCGCCGAGTCTGCGGCAGAAC +
Preference number: 6 (lower is better)
Translates to: WSDLSPGRRCWN*TEGHPPSLRQN
Trigger: GTTCTGCCGCAGACTCGGCGGGTGTCCTTCGGTTCAGTTCCAACACCGCCTGCCTGGAGAGAGGTCAGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392343.3
ENST00000582885.1
ENST00000665763.1
CDS GCA 72 bp TCTCGTTCCAGGGTCACGGCCTTCAGCACCACCTCCTaGTCCTGTAGCGCCTGCTCTGTCTCCTGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SRSRVTAFSTTS*SCSACSVSCSL
Trigger: CAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTGGTGCTGAAGGCCGTGACCCTGGAACGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 72 bp AGGCTCTCCCTCTGCCATGGGAGAAGTGGGAACACGTaGCTCCGCACACACCTGGTCCCAGCTTTGCAGACC +
Preference number: 6 (lower is better)
Translates to: RLSLCHGRSGNT*LRTHLVPALQT
Trigger: GGTCTGCAAAGCTGGGACCAGGTGTGTGCGGAGGCACGTGTTCCCACTTCTCCCATGGCAGAGGGAGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp TGTGTTGTGTCTTCGGGCCTTGCAGGGCGTCAAGTCTaGTGCCCACCTGTGCTGAGCGGGGCTGGTGCTTTC +
Preference number: 6 (lower is better)
Translates to: CVVSSGLAGRQV*CPPVLSGAGAF
Trigger: GAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGACTTGACGCCCTGCAAGGCCCGAAGACACAACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000389641.9
ENST00000392345.6
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 72 bp AGTGGCTGGACTGGGAGCCCAGGAGGGCTAGGGTGCTaGAGACCCCTGAGGACAAGACCTCCTTACCAACAG +
Preference number: 6 (lower is better)
Translates to: SGWTGSPGGLGC*RPLRTRPPYQQ
Trigger: CTGTTGGTAAGGAGGTCTTGTCCTCAGGGGTCTCCAGCACCCTAGCCCTCCTGGGCTCCCAGTCCAGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp CGGGAACACATGGCGCTCAGGTGGGTGGGAGATGTGTaGGGGTACAGACATGCTTACCCCTGGCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: REHMALRWVGDV*GYRHAYPWLCC
Trigger: GCAGCACAGCCAGGGGTAAGCATGTCTGTACCCCCACACATCTCCCACCCACCTGAGCGCCATGTGTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp GGAGACGCAGTGCCGCGTCACACCTCAGTACTTGGGTaGGTGTACACAATACGTGACCTGGTCCGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: GDAVPRHTSVLG*VYTIRDLVRGP
Trigger: CGGGCCACGGACCAGGTCACGTATTGTGTACACCCACCCAAGTACTGAGGTGTGACGCGGCACTGCGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp CACACACCTGGTCCCAGCTTTGCAGACCTGGCTCCTTaGCTAGGGCCGTGGAAGGGGACCAGCTTTCGTCAG +
Preference number: 6 (lower is better)
Translates to: HTPGPSFADLAP*LGPWKGTSFRQ
Trigger: CTGACGAAAGCTGGTCCCCTTCCACGGCCCTAGCCAAGGAGCCAGGTCTGCAAAGCTGGGACCAGGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp GGGCTGGATCCCAGGTCTAGCAACCTCCACATGTCCTaGAGGGTGCCACTGGCAAAGGAGGAGGAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: GLDPRSSNLHMS*RVPLAKEEELW
Trigger: CCACAGCTCCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTTGCTAGACCTGGGATCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000389641.9
ENST00000392345.6
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000583593.2
ENST00000665763.1
CDS CCA 72 bp GGCGCTCGGCACACTGTGAGGATGGGCGGATGGAGTTaGTCTGCAGGTTCCAGAATGAATGGGGCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: GARHTVRMGGWS*SAGSRMNGALE
Trigger: CTCCAGGGCCCCATTCATTCTGGAACCTGCAGACCAACTCCATCCGCCCATCCTCACAGTGTGCCGAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS CCA 72 bp GCGTCAAGTCTGCTGCCCACCTGTGCTGAGCGGGGCTaGTGCTTTCCCAAGTGTCTGGAAGGAGCCTCATCC +
Preference number: 6 (lower is better)
Translates to: ASSLLPTCAERG*CFPKCLEGASS
Trigger: GGATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGACTTGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 72 bp CGTGCTCCTTACCAAGCTCGCCTCCTGGTTCATGTTTaGGTGAAGGGCTCCACTCCACGCCAGGCTGGGCGT +
Preference number: 6 (lower is better)
Translates to: RAPYQARLLVHV*VKGSTPRQAGR
Trigger: ACGCCCAGCCTGGCGTGGAGTGGAGCCCTTCACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS CAA 72 bp GCACACACCTGGTCCCAGCTTTGCAGACCTGGCTCCTaGGCTAGGGCCGTGGAAGGGGACCAGCTTTCGTCA +
Preference number: 6 (lower is better)
Translates to: AHTWSQLCRPGS*ARAVEGDQLSS
Trigger: TGACGAAAGCTGGTCCCCTTCCACGGCCCTAGCCAAGGAGCCAGGTCTGCAAAGCTGGGACCAGGTGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 72 bp ACGTGCTCCTTACCAAGCTCGCCTCCTGGTTCATGTTaGGGTGAAGGGCTCCACTCCACGCCAGGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: TCSLPSSPPGSC*GEGLHSTPGWA
Trigger: CGCCCAGCCTGGCGTGGAGTGGAGCCCTTCACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS CAA 90 bp ACAGGAGGTAGGCTGGAGACGCAGTGCCGCGTCACACCTCAGTACTaGGGTGGGTGTACACAATACGTGACCTGGTCCGTGGCCCGTGTG +
Preference number: 6 (lower is better)
Translates to: TGGRLETQCRVTPQY*GGCTQYVTWSVARV
Trigger: CACACGGGCCACGGACCAGGTCACGTATTGTGTACACCCACCCAAGTACTGAGGTGTGACGCGGCACTGCGTCTCCAGCCTACCTCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 90 bp AGAGGATACTGGGCCAGCTTGGACAGATCCTCCTGCTTGACCAGCTaGGACAGACCCTCCGGCTTGACCAGCTTGGGCAGACCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RGYWASLDRSSCLTS*DRPSGLTSLGRPSC
Trigger: GCAGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577530.1
CDS TCA 72 bp GCTGGCACTCTCGCGTGGAAGAGTGCCCCGTTCCCCTaGCCGATCTGTCCATTGCTATCAGCCTGGACCCAT +
Preference number: 6 (lower is better)
Translates to: AGTLAWKSAPFP*PICPLLSAWTH
Trigger: ATGGGTCCAGGCTGATAGCAATGGACAGATCGGTCAGGGGAACGGGGCACTCTTCCACGCGAGAGTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp CTGCCCTGTTGTACCCCTGAGGCATCCTTATGGTCTTaGCCATCCCATGCCAAGGCAGCTCTGGCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LPCCTPEASLWS*PSHAKAALACS
Trigger: GGAGCAGGCCAGAGCTGCCTTGGCATGGGATGGGCAAGACCATAAGGATGCCTCAGGGGTACAACAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327026.7
ENST00000475635.1
CDS GCA 72 bp GTCGCGTTCCTTGGCTGGCACTCTCGCGTGGAAGAGTaGCCCGTTCCCCTGACCGATCTGTCCATTGCTATC +
Preference number: 6 (lower is better)
Translates to: VAFLGWHSRVEE*PVPLTDLSIAI
Trigger: GATAGCAATGGACAGATCGGTCAGGGGAACGGGGCACTCTTCCACGCGAGAGTGCCAGCCAAGGAACGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp TCAAGTCTGCTGCCCACCTGTGCTGAGCGGGGCTGGTaGTTTCCCAAGTGTCTGGAAGGAGCCTCATCCTCG +
Preference number: 6 (lower is better)
Translates to: SSLLPTCAERGW*FPKCLEGASSS
Trigger: CGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGACTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 72 bp GTCCCCGAGCTTCCTGAGTGCCAGTCCAGAGGATACTaGGCCAGCTTGGACAGATCCTCCTGCTTGACCAGC +
Preference number: 6 (lower is better)
Translates to: VPELPECQSRGY*ASLDRSSCLTS
Trigger: GCTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000577530.1
ENST00000665763.1
CDS CCA 72 bp GGGCCTGACCAAAACCAGGATAGGAGTGCCATGGCCTaGAGCAGCTGTGTGGCTCTGAACGCAGCAGTGAGG +
Preference number: 6 (lower is better)
Translates to: GPDQNQDRSAMA*SSCVALNAAVR
Trigger: CCTCACTGCTGCGTTCAGAGCCACACAGCTGCTCCAGGCCATGGCACTCCTATCCTGGTTTTGGTCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp ATCAGGACCTGGGGTCGTCTCCACAGCTCAGAGCTGTaGCTCAAACCCAGCCATGGAGTTGGGGGTCACTCC +
Preference number: 6 (lower is better)
Translates to: IRTWGRLHSSEL*LKPSHGVGGHS
Trigger: GGAGTGACCCCCAACTCCATGGCTGGGTTTGAGCCACAGCTCTGAGCTGTGGAGACGACCCCAGGTCCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp GCACTGGCGATGGGAGCTCTGATCACTCGGGTCAGCTaGGGTCAAACAGGCTGCTCCACTGGAAAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: ALAMGALITRVS*GQTGCSTGKPA
Trigger: TGCTGGCTTTCCAGTGGAGCAGCCTGTTTGACCCCAGCTGACCCGAGTGATCAGAGCTCCCATCGCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp ACCCTGCACTGGCTTCCTGCACTACAGGAGGTAGGCTaGAGACGCAGTGCCGCGTCACACCTCAGTACTTGG +
Preference number: 6 (lower is better)
Translates to: TLHWLPALQEVG*RRSAASHLSTW
Trigger: CCAAGTACTGAGGTGTGACGCGGCACTGCGTCTCCAGCCTACCTCCTGTAGTGCAGGAAGCCAGTGCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp CTGAGATGTAAAATGGGGCTGCACCTGTCCCAAAGGTaGGCTGCGATCCAAAGGCCTCCTGGGCTCCTCGCC +
Preference number: 6 (lower is better)
Translates to: LRCKMGLHLSQR*AAIQRPPGLLA
Trigger: GGCGAGGAGCCCAGGAGGCCTTTGGATCGCAGCCCACCTTTGGGACAGGTGCAGCCCCATTTTACATCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392346.6
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 72 bp AGCCTCAGCTCAGCTCTTGACCAAGTTGGCCTCTGGTaGCTCATTCTCCAGGCTGCTCCGGGCTCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: SLSSALDQVGLW*LILQAAPGSLG
Trigger: ACCCAGAGAGCCCGGAGCAGCCTGGAGAATGAGCCACCAGAGGCCAACTTGGTCAAGAGCTGAGCTGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582100.1
CDS CAA 90 bp GGCTTGCCTGAGGTCTCCTCATGCATAAGCTCAGGTTCTGCATTTTaGGCAGGGACCCCGAGCGCGAGTCTGTGCCGTCTCAGTGCGACC +
Preference number: 6 (lower is better)
Translates to: GLPEVSSCISSGSAF*AGTPSASLCRLSAT
Trigger: GGTCGCACTGAGACGGCACAGACTCGCGCTCGGGGTCCCTGCCAAAAATGCAGAACCTGAGCTTATGCATGAGGAGACCTCAGGCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 90 bp GTTGATGCATCTTCACGAAGTTGGTCAATGGCAGCGTCCTTCTCCTaGGCGGTGTCAGCCTGTCTCCACTCTGCCCTGCGGAGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: VDASSRSWSMAASFS*AVSACLHSALRSCA
Trigger: GGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTGAAGATGCATCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CAA 90 bp CCAGTGGCAGCATGGTGGCCGTCTTTCTCTATCCTAATTCCCGTCTaGGTGAATCGGCTCTGCCTGGGCAGCAGGCGGGGTGGACCTGTT +
Preference number: 6 (lower is better)
Translates to: PVAAWWPSFSILIPV*VNRLCLGSRRGGPV
Trigger: AACAGGTCCACCCCGCCTGCTGCCCAGGCAGAGCCGATTCACCAAGACGGGAATTAGGATAGAGAAAGACGGCCACCATGCTGCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392343.3
CDS TCA 72 bp TGTGACTCTGCCTGGGGCCTCCTGGACAGTCTCCCCTaGTGCACAGTCTCAGGTGTAGATCAATGGGCACGG +
Preference number: 6 (lower is better)
Translates to: CDSAWGLLDSLP*CTVSGVDQWAR
Trigger: CCGTGCCCATTGATCTACACCTGAGACTGTGCATCAGGGGAGACTGTCCAGGAGGCCCCAGGCAGAGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 72 bp GCAGGGTCCTCTCCTTCCTGGACAGCAGGACTGTCCTaGTCCCACTGCAAGGCTGCTGTGATGGTGACCAGT +
Preference number: 6 (lower is better)
Translates to: AGSSPSWTAGLS*SHCKAAVMVTS
Trigger: ACTGGTCACCATCACAGCAGCCTTGCAGTGGGATCAGGACAGTCCTGCTGTCCAGGAAGGAGAGGACCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 72 bp TGGGCTATCCTGAGATGCTTCCCCAGCTCAGCCACCTaGTTCCGCAGCTCCAAAACCTCCAGGTGTACCTGG +
Preference number: 6 (lower is better)
Translates to: WAILRCFPSSAT*FRSSKTSRCTW
Trigger: CCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTCAGGATAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000665763.1
CDS GCA 72 bp GCTTCCTGCACTACAGGAGGTAGGCTGGAGACGCAGTaGCGCGTCACACCTCAGTACTTGGGTGGGTGTACA +
Preference number: 6 (lower is better)
Translates to: ASCTTGGRLETQ*RVTPQYLGGCT
Trigger: TGTACACCCACCCAAGTACTGAGGTGTGACGCGGCACTGCGTCTCCAGCCTACCTCCTGTAGTGCAGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp CCATACCTGCCCTGTTGTACCCCTGAGGCATCCTTATaGTCTTGCCCATCCCATGCCAAGGCAGCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: PYLPCCTPEASL*SCPSHAKAALA
Trigger: GGCCAGAGCTGCCTTGGCATGGGATGGGCAAGACCATAAGGATGCCTCAGGGGTACAACAGGGCAGGTATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp GAGACTCTGCCCTGTTGTACCCCTGAGGCATCCTTATaGTCTTGCCCATCCCATGCCAAGGCAGCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: ETLPCCTPEASL*SCPSHAKAALA
Trigger: GGCCAGAGCTGCCTTGGCATGGGATGGGCAAGACCATAAGGATGCCTCAGGGGTACAACAGGGCAGAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475635.1
CDS CAA 72 bp AGGCTGGAGACGCAGTGCCGCGTCACACCTCAGTACTaGGGTGGGTGTACACAATACGTGACCTGGTCCGTG +
Preference number: 6 (lower is better)
Translates to: RLETQCRVTPQY*GGCTQYVTWSV
Trigger: CACGGACCAGGTCACGTATTGTGTACACCCACCCAAGTACTGAGGTGTGACGCGGCACTGCGTCTCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 72 bp AGCTCCCCCTGGTCCTCGGCCTCCATAGGCCCTCTCTaGGTGAGGCCCTGTAACAAAACTCACAGGCAGACA +
Preference number: 6 (lower is better)
Translates to: SSPWSSASIGPL*VRPCNKTHRQT
Trigger: TGTCTGCCTGTGAGTTTTGTTACAGGGCCTCACCAAGAGAGGGCCTATGGAGGCCGAGGACCAGGGGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS CAA 90 bp TTCTGGACCTGGCGCTCGGCACACTGTGAGGATGGGCGGATGGAGTaGGTCTGCAGGTTCCAGAATGAATGGGGCCCTGGAGTTGAGTCA +
Preference number: 6 (lower is better)
Translates to: FWTWRSAHCEDGRME*VCRFQNEWGPGVES
Trigger: TGACTCAACTCCAGGGCCCCATTCATTCTGGAACCTGCAGACCAACTCCATCCGCCCATCCTCACAGTGTGCCGAGCGCCAGGTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS CAA 90 bp TCTGCCTGGGCAGCAGGCGGGGTGGACCTGTTGGGTGTTTATGTCTaGGGTGTTTATGTCTTGGGGACTGAGCCCTCACCCTGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: SAWAAGGVDLLGVYV*GVYVLGTEPSPCGL
Trigger: CAGACCACAGGGTGAGGGCTCAGTCCCCAAGACATAAACACCCAAGACATAAACACCCAACAGGTCCACCCCGCCTGCTGCCCAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392343.3
ENST00000582885.1
CDS CAA 90 bp TCCTCCTGCTTGACCAGCTTGGACAGACCCTCCGGCTTGACCAGCTaGGGCAGACCCTCCTGCAGAGAAGAGTGGCTTCTGTCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: SSCLTSLDRPSGLTS*GRPSCREEWLLSAH
Trigger: ATGAGCTGACAGAAGCCACTCTTCTCTGCAGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAGCTGGTCAAGCAGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577530.1
CDS CAA 90 bp GGCGGGGTGGACCTGTTGGGTGTTTATGTCTTGGGTGTTTATGTCTaGGGGACTGAGCCCTCACCCTGTGGTCTGACCTCTCTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: GGVDLLGVYVLGVYV*GTEPSPCGLTSLQA
Trigger: TGCCTGGAGAGAGGTCAGACCACAGGGTGAGGGCTCAGTCCCCAAGACATAAACACCCAAGACATAAACACCCAACAGGTCCACCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392343.3
ENST00000582885.1
CDS TCA 72 bp TCCCTCGGCCTTCCCATACCTGCCCTGTTGTACCCCTaGGGCATCCTTATGGTCTTGCCCATCCCATGCCAA +
Preference number: 6 (lower is better)
Translates to: SLGLPIPALLYP*GILMVLPIPCQ
Trigger: TTGGCATGGGATGGGCAAGACCATAAGGATGCCTCAGGGGTACAACAGGGCAGGTATGGGAAGGCCGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 72 bp AAGTCACGTGTGGGGAGATGCTGCTTCGCATCCGTCTaGTGGGAATCCCTCTGGTTCAGCACCCATCCGTGG +
Preference number: 6 (lower is better)
Translates to: KSRVGRCCFASV*WESLWFSTHPW
Trigger: CCACGGATGGGTGCTGAACCAGAGGGATTCCCATCAGACGGATGCGAAGCAGCATCTCCCCACACGTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp AGCCTCTGGGTCAGGCTGGTTTGCATCTGTGCTCTCTaGCGCTGTCTGGATGGGAGGAGGAATCTGATGGCT +
Preference number: 6 (lower is better)
Translates to: SLWVRLVCICAL*RCLDGRRNLMA
Trigger: AGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1
CDS GCA 72 bp GGAGCCTGGGGTGGCTTTGGGGACCTGTCTTCTTTCTaGCGAGGTGATTTACAGGTCACCGTGTGGATGCTG +
Preference number: 6 (lower is better)
Translates to: GAWGGFGDLSSF*RGDLQVTVWML
Trigger: CAGCATCCACACGGTGACCTGTAAATCACCTCGGCAGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000389641.9
ENST00000392345.6
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS GCA 72 bp TCGGCACACTGTGAGGATGGGCGGATGGAGTTGGTCTaGAGGTTCCAGAATGAATGGGGCCCTGGAGTTGAG +
Preference number: 6 (lower is better)
Translates to: SAHCEDGRMELV*RFQNEWGPGVE
Trigger: CTCAACTCCAGGGCCCCATTCATTCTGGAACCTGCAGACCAACTCCATCCGCCCATCCTCACAGTGTGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392345.6
CDS GCA 72 bp GTGATGGTGACCAGTGAGGCCCGCGCTGCATGTTTTTaGACACTGAGGAGCTGCCTCCATTCATTCCCCCTC +
Preference number: 6 (lower is better)
Translates to: VMVTSEARAACF*TLRSCLHSFPL
Trigger: GAGGGGGAATGAATGGAGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCGGGCCTCACTGGTCACCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS CCA 72 bp CTCCTGCAGCTTGGCAGCAACCTTTCAATGTCCTGCTaGGATCGGGCCACCTGTGCCTTGAGCTTCACCTCT +
Preference number: 6 (lower is better)
Translates to: LLQLGSNLSMSC*DRATCALSFTS
Trigger: AGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTTGCTGCCAAGCTGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp CAGACCCTCCAGTCGTCTCTGTCGAGGTGCGGACGCTaGGCTGAGACTCAGCATGAGGTGAGGACATCTTTA +
Preference number: 6 (lower is better)
Translates to: QTLQSSLSRCGR*AETQHEVRTSL
Trigger: TAAAGATGTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 72 bp TCGGCTCTGCCTGGGCAGCAGGCGGGGTGGACCTGTTaGGTGTTTATGTCTTGGGTGTTTATGTCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: SALPGQQAGWTC*VFMSWVFMSWG
Trigger: TCCCCAAGACATAAACACCCAAGACATAAACACCCAACAGGTCCACCCCGCCTGCTGCCCAGGCAGAGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392343.3
ENST00000582885.1
CDS CCA 72 bp AGGAGGGAGGGCGTGGTGCAACAGCCACCCTGGGAATaGGATGGGGACAGAGTTTGTTCTCTGTGCATCACT +
Preference number: 6 (lower is better)
Translates to: RREGVVQQPPWE*DGDRVCSLCIT
Trigger: AGTGATGCACAGAGAACAAACTCTGTCCCCATCCCATTCCCAGGGTGGCTGTTGCACCACGCCCTCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483145.1
CDS CAA 72 bp GAGGTCTCCTCATGCATAAGCTCAGGTTCTGCATTTTaGGCAGGGACCCCGAGCGCGAGTCTGTGCCGTCTC +
Preference number: 6 (lower is better)
Translates to: EVSSCISSGSAF*AGTPSASLCRL
Trigger: GAGACGGCACAGACTCGCGCTCGGGGTCCCTGCCAAAAATGCAGAACCTGAGCTTATGCATGAGGAGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 72 bp GCAGCAGGCGGGGTGGACCTGTTGGGTGTTTATGTCTaGGGTGTTTATGTCTTGGGGACTGAGCCCTCACCC +
Preference number: 6 (lower is better)
Translates to: AAGGVDLLGVYV*GVYVLGTEPSP
Trigger: GGGTGAGGGCTCAGTCCCCAAGACATAAACACCCAAGACATAAACACCCAACAGGTCCACCCCGCCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392343.3
ENST00000582885.1
CDS CAA 72 bp ATCGGCTCTGCCTGGGCAGCAGGCGGGGTGGACCTGTaGGGTGTTTATGTCTTGGGTGTTTATGTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: IGSAWAAGGVDL*GVYVLGVYVLG
Trigger: CCCCAAGACATAAACACCCAAGACATAAACACCCAACAGGTCCACCCCGCCTGCTGCCCAGGCAGAGCCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392343.3
ENST00000582885.1
CDS TCA 72 bp GTTTCTTCTCCTGCACCTGAGCCTCAGCTCAGCTCTTaGCCAAGTTGGCCTCTGGTGGCTCATTCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: VSSPAPEPQLSS*PSWPLVAHSPG
Trigger: GCCTGGAGAATGAGCCACCAGAGGCCAACTTGGTCAAGAGCTGAGCTGAGGCTCAGGTGCAGGAGAAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582100.1
CDS GCA 72 bp CAACCTTTCAATGTCCTGCTGGGATCGGGCCACCTGTaGCTTGAGCTTCACCTCTTCTTCCTGCAGCGTCTG +
Preference number: 6 (lower is better)
Translates to: QPFNVLLGSGHL*LELHLFFLQRL
Trigger: CAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp CTCATCTGGGCAATCGCGTTTCGCAAGCTCGTGTTCTaGTCTCGGAGCCGCTGGATCTCACTGGATGGAAAG +
Preference number: 6 (lower is better)
Translates to: LIWAIAFRKLVF*SRSRWISLDGK
Trigger: CTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1
CDS GCA 72 bp TTCTGTCTGAGTCGTGTCACCAGCAGGTTTAGGAGCTaGACTCTGTCCCCGAGCTTCCTGAGTGCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: FCLSRVTSRFRS*TLSPSFLSASP
Trigger: TGGACTGGCACTCAGGAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000419322.6
ENST00000665763.1
CDS GCA 72 bp GTTTGGGCACTCGCCAAGCATCTAGACCCGCTCATCTaGAGATGTCCCTCTGTTTGGGCTTGCCTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: VWALAKHLDPLI*RCPSVWACLRS
Trigger: AGACCTCAGGCAAGCCCAAACAGAGGGACATCTGCAGATGAGCGGGTCTAGATGCTTGGCGAGTGCCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp CTCCATTCATTCCCCCTCGCATTCCTGGAGCCCACGTaGTCCTTACCAAGCTCGCCTCCTGGTTCATGTTTG +
Preference number: 6 (lower is better)
Translates to: LHSFPLAFLEPT*SLPSSPPGSCL
Trigger: CAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACGTGGGCTCCAGGAATGCGAGGGGGAATGAATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392346.6
ENST00000419322.6
CDS GCA 72 bp GTACCTTTCAATGTCCTGCTGGGATCGGGCCACCTGTaGCTTGAGCTTCACCTCTTCTTCCTGCAGCGTCTG +
Preference number: 6 (lower is better)
Translates to: VPFNVLLGSGHL*LELHLFFLQRL
Trigger: CAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 72 bp CACCTGATCACGCTCCAGGCTCCGCTCCCTTTCCACTaGCAGGGACAGCTGTTGCTTGTACCTTTCAATGTC +
Preference number: 6 (lower is better)
Translates to: HLITLQAPLPFH*QGQLLLVPFNV
Trigger: GACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS GCA 72 bp GGTGTTGGAACTGAACCGAAGGACACCCGCCGAGTCTaGGGCAGAACTGACTGCTCATGTGCTGGTGAAAAC +
Preference number: 6 (lower is better)
Translates to: GVGTEPKDTRRV*GRTDCSCAGEN
Trigger: GTTTTCACCAGCACATGAGCAGTCAGTTCTGCCGCAGACTCGGCGGGTGTCCTTCGGTTCAGTTCCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392343.3
ENST00000582885.1
ENST00000665763.1
CDS CCA 72 bp CCTCAGTACTTGGGTGGGTGTACACAATACGTGACCTaGTCCGTGGCCCGTGTGCAAATGTCACCAACCGTC +
Preference number: 6 (lower is better)
Translates to: PQYLGGCTQYVT*SVARVQMSPTV
Trigger: GACGGTTGGTGACATTTGCACACGGGCCACGGACCAGGTCACGTATTGTGTACACCCACCCAAGTACTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp TTCAGCTTTCTCTGGAGTCGGTGCATAGATAAGGTCTaGGGGGCACGTGCCACTGACCGGAGGTGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: FSFLWSRCIDKV*GARATDRRCRK
Trigger: TTTCCTGCACCTCCGGTCAGTGGCACGTGCCCCCCAGACCTTATCTATGCACCGACTCCAGAGAAAGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392346.6
ENST00000419322.6
ENST00000665763.1
CDS CCA 72 bp CAGCAGGCGGGGTGGACCTGTTGGGTGTTTATGTCTTaGGTGTTTATGTCTTGGGGACTGAGCCCTCACCCT +
Preference number: 6 (lower is better)
Translates to: QQAGWTCWVFMS*VFMSWGLSPHP
Trigger: AGGGTGAGGGCTCAGTCCCCAAGACATAAACACCCAAGACATAAACACCCAACAGGTCCACCCCGCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392343.3
ENST00000582885.1
CDS GCA 72 bp CGCCTCCATGCATGTAGACACAGAGCCTGGAGTGTATaGCCCGCCTGTGCCTTAGCTCCAATAACTGGGATT +
Preference number: 6 (lower is better)
Translates to: RLHACRHRAWSV*PACALAPITGI
Trigger: AATCCCAGTTATTGGAGCTAAGGCACAGGCGGGGCATACACTCCAGGCTCTGTGTCTACATGCATGGAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp GGAAGAGTGCCCCGTTCCCCTGACCGATCTGTCCATTaGTATCAGCCTGGACCCATGATTTCCTGGTTGAGT +
Preference number: 6 (lower is better)
Translates to: GRVPRSPDRSVH*YQPGPMISWLS
Trigger: ACTCAACCAGGAAATCATGGGTCCAGGCTGATAGCAATGGACAGATCGGTCAGGGGAACGGGGCACTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp AGCTCTGCACGGAGCCTGTTCCCCATCTCGATGAGCTaGTCTTTCTCCAGGCGGAGGCTGATGATTTTTCTG +
Preference number: 6 (lower is better)
Translates to: SSARSLFPISMS*SFSRRRLMIFL
Trigger: CAGAAAAATCATCAGCCTCCGCCTGGAGAAAGAGCAGCTCATCGAGATGGGGAACAGGCTCCGTGCAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392346.6
ENST00000419322.6
ENST00000665763.1
CDS CCA 72 bp GATGCATCTTCACGAAGTCAACGGCCTCTGGTGCTCTaGGAAGCAGCTTTATCCCTGGACCATGAGCCACCT +
Preference number: 6 (lower is better)
Translates to: DASSRSQRPLVL*EAALSLDHEPP
Trigger: AGGTGGCTCATGGTCCAGGGATAAAGCTGCTTCCCAGAGCACCAGAGGCCGTTGACTTCGTGAAGATGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp TTCAACGTCACTGCCTATTGGCCTAGTTCTGGTCCTTaGGGACCCCTTTCAGCTGCTTCCTGTGCCTTCCGA +
Preference number: 6 (lower is better)
Translates to: FNVTAYWPSSGP*GPLSAASCAFR
Trigger: TCGGAAGGCACAGGAAGCAGCTGAAAGGGGTCCCCAAGGACCAGAACTAGGCCAATAGGCAGTGACGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp TCTTCTTTCTGCCGAGGTGATTTACAGGTCACCGTGTaGATGCTGTGTTGTGTCTTCGGGCCTTGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: SSFCRGDLQVTV*MLCCVFGPCRA
Trigger: CGCCCTGCAAGGCCCGAAGACACAACACAGCATCCACACGGTGACCTGTAAATCACCTCGGCAGAAAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000389641.9
ENST00000392345.6
ENST00000392346.6
ENST00000392347.5
ENST00000419322.6
ENST00000483145.1
ENST00000665763.1
CDS CCA 72 bp AGGGACAGCTGTTGCTTGTACCTTTCAATGTCCTGCTaGGATCGGGCCACCTGTGCCTTGAGCTTCACCTCT +
Preference number: 6 (lower is better)
Translates to: RDSCCLYLSMSC*DRATCALSFTS
Trigger: AGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 72 bp AGCTCATACCAGTCGTCTCTGTCGAGGTGCGGACGCTaGGCTGAGACTCAGCATGAGGTGAGGACATCTTTA +
Preference number: 6 (lower is better)
Translates to: SSYQSSLSRCGR*AETQHEVRTSL
Trigger: TAAAGATGTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGACTGGTATGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577530.1
CDS CAA 90 bp ACTCGCCAAGCATCTAGACCCGCTCATCTGCAGATGTCCCTCTGTTaGGGCTTGCCTGAGGTCTCCTCATGCATAAGCTCAGGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: TRQASRPAHLQMSLC*GLPEVSSCISSGSA
Trigger: TGCAGAACCTGAGCTTATGCATGAGGAGACCTCAGGCAAGCCCAAACAGAGGGACATCTGCAGATGAGCGGGTCTAGATGCTTGGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 72 bp TTTCAATGTCCTGCTGGGATCGGGCCACCTGTGCCTTaGGCTTCACCTCTTCTTCCTGCAGCGTCTGAATCT +
Preference number: 6 (lower is better)
Translates to: FQCPAGIGPPVP*ASPLLPAASES
Trigger: AGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS TCA 72 bp GTGCTCTCTGCCGCTGTCTGGATGGGAGGAGGAATCTaGTGGCTTAGAGCCTCCATTTCTTTCCTCATCTGG +
Preference number: 6 (lower is better)
Translates to: VLSAAVWMGGGI*WLRASISFLIW
Trigger: CCAGATGAGGAAAGAAATGGAGGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1
CDS GCA 72 bp CAGTTGATGCATCTTCACGAAGTCAACGGCCTCTGGTaGTCTGGGAAGCAGCTTTATCCCTGGACCATGAGC +
Preference number: 6 (lower is better)
Translates to: QLMHLHEVNGLW*SGKQLYPWTMS
Trigger: GCTCATGGTCCAGGGATAAAGCTGCTTCCCAGAGCACCAGAGGCCGTTGACTTCGTGAAGATGCATCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 72 bp AGACCCGCTCATCTGCAGATGTCCCTCTGTTTGGGCTaGCCTGAGGTCTCCTCATGCATAAGCTCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: RPAHLQMSLCLG*PEVSSCISSGS
Trigger: AGAACCTGAGCTTATGCATGAGGAGACCTCAGGCAAGCCCAAACAGAGGGACATCTGCAGATGAGCGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 72 bp GCATCTAGACCCGCTCATCTGCAGATGTCCCTCTGTTaGGGCTTGCCTGAGGTCTCCTCATGCATAAGCTCA +
Preference number: 6 (lower is better)
Translates to: ASRPAHLQMSLC*GLPEVSSCISS
Trigger: TGAGCTTATGCATGAGGAGACCTCAGGCAAGCCCAAACAGAGGGACATCTGCAGATGAGCGGGTCTAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 72 bp TGTGTGACTTACTCTTTCTCTATCCTAATTCCCGTCTaGGTGAATCGGCTCTGCCTGGGCAGCAGGCGGGGT +
Preference number: 6 (lower is better)
Translates to: CVTYSFSILIPV*VNRLCLGSRRG
Trigger: ACCCCGCCTGCTGCCCAGGCAGAGCCGATTCACCAAGACGGGAATTAGGATAGAGAAAGAGTAAGTCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582885.1
CDS CAA 90 bp GGGCGTGGTGCAACAGCCACCCTGGGAATGGGATGGGGACAGAGTTaGTTCTCTGTGCATCACTTCTGGATTCCTCTTGTGTTGAATGCA +
Preference number: 6 (lower is better)
Translates to: GRGATATLGMGWGQS*FSVHHFWIPLVLNA
Trigger: TGCATTCAACACAAGAGGAATCCAGAAGTGATGCACAGAGAACAAACTCTGTCCCCATCCCATTCCCAGGGTGGCTGTTGCACCACGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483145.1
CDS TCA 72 bp CGCTCATCTGCAGATGTCCCTCTGTTTGGGCTTGCCTaGGGTCTCCTCATGCATAAGCTCAGGTTCTGCATT +
Preference number: 6 (lower is better)
Translates to: RSSADVPLFGLA*GLLMHKLRFCI
Trigger: AATGCAGAACCTGAGCTTATGCATGAGGAGACCTCAGGCAAGCCCAAACAGAGGGACATCTGCAGATGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp ATGTCCCTCTGTTTGGGCTTGCCTGAGGTCTCCTCATaGATAAGCTCAGGTTCTGCATTTTTGGCAGGGACC +
Preference number: 6 (lower is better)
Translates to: MSLCLGLPEVSS*ISSGSAFLAGT
Trigger: GGTCCCTGCCAAAAATGCAGAACCTGAGCTTATGCATGAGGAGACCTCAGGCAAGCCCAAACAGAGGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp GAGTGTATGCCCCGCCTGTGCCTTAGCTCCAATAACTaGGATTGGGCTGCAGGTGGCTTCATCTCTCAATTT +
Preference number: 6 (lower is better)
Translates to: ECMPRLCLSSNN*DWAAGGFISQF
Trigger: AAATTGAGAGATGAAGCCACCTGCAGCCCAATCCCAGTTATTGGAGCTAAGGCACAGGCGGGGCATACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp AGTCAGTGGATTGTGGTCTTCAACGTCACTGCCTATTaGCCTAGTTCTGGTCCTTGGGGACCCCTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SQWIVVFNVTAY*PSSGPWGPLSA
Trigger: AGCTGAAAGGGGTCCCCAAGGACCAGAACTAGGCCAATAGGCAGTGACGTTGAAGACCACAATCCACTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp CACTCGGGTCAGCTGGGGTCAAACAGGCTGCTCCACTaGAAAGCCAGCATTTCCCTTGGAAATAAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: HSGQLGSNRLLH*KASISLGNKKS
Trigger: TGACTTCTTATTTCCAAGGGAAATGCTGGCTTTCCAGTGGAGCAGCCTGTTTGACCCCAGCTGACCCGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 90 bp GACCGATCTGTCCATTGCTATCAGCCTGGACCCATGATTTCCTGGTaGAGTCAGTGGATTGTGGTCTTCAACGTCACTGCCTATTGGCCT +
Preference number: 6 (lower is better)
Translates to: DRSVHCYQPGPMISW*SQWIVVFNVTAYWP
Trigger: AGGCCAATAGGCAGTGACGTTGAAGACCACAATCCACTGACTCAACCAGGAAATCATGGGTCCAGGCTGATAGCAATGGACAGATCGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 90 bp CAAGCATCTAGACCCGCTCATCTGCAGATGTCCCTCTGTTTGGGCTaGCCTGAGGTCTCCTCATGCATAAGCTCAGGTTCTGCATTTTTG +
Preference number: 6 (lower is better)
Translates to: QASRPAHLQMSLCLG*PEVSSCISSGSAFL
Trigger: CAAAAATGCAGAACCTGAGCTTATGCATGAGGAGACCTCAGGCAAGCCCAAACAGAGGGACATCTGCAGATGAGCGGGTCTAGATGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 72 bp TTCTTGCCCCTTCATTCTAAACAAGTGGGAAGACAGTaGACTACGCAAGGGCCAACAGTGAGAGCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: FLPLHSKQVGRQ*TTQGPTVRAPG
Trigger: CCCAGGAGCTCTCACTGTTGGCCCTTGCGTAGTTCACTGTCTTCCCACTTGTTTAGAATGAAGGGGCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 72 bp GCTGAAATGTCTTCACGTCCTGAGGACATGTATGAGTaGGTGACACAGGGAAGTCCTTCTCAGAGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: AEMSSRPEDMYE*VTQGSPSQRLR
Trigger: CCTCAGCCTCTGAGAAGGACTTCCCTGTGTCACTCACTCATACATGTCCTCAGGACGTGAAGACATTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 72 bp ACTTATTTCTTCTTCATGCTGCCTGAGAAGCATCTATaGCCCGGAAGCCTCCTCCCCACTTGGAGTTGTCCC +
Preference number: 6 (lower is better)
Translates to: TYFFFMLPEKHL*PGSLLPTWSCP
Trigger: GGGACAACTCCAAGTGGGGAGGAGGCTTCCGGGTCATAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577530.1
CDS GCA 72 bp GTGTTGCTCATGTTGTCAGCCTGCAGACGGAATTCGTaGTCCCTCTTCCGCATTTTCGATTCAAACTCCAGC +
Preference number: 6 (lower is better)
Translates to: VLLMLSACRRNS*SLFRIFDSNSS
Trigger: GCTGGAGTTTGAATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000578910.1
ENST00000581625.2
ENST00000665763.1
CDS CAA 72 bp TACCCACTTCTCTCTATACCCAACATAACGGACACATaGATCCTCTACCTGAGGGTCCAGCCCCAACATGGC +
Preference number: 6 (lower is better)
Translates to: YPLLSIPNITDT*ILYLRVQPQHG
Trigger: GCCATGTTGGGGCTGGACCCTCAGGTAGAGGATCAATGTGTCCGTTATGTTGGGTATAGAGAGAAGTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 72 bp CAAACAGGCTGCTCCACTGGAAAGCCAGCATTTCCCTaGGAAATAAGAAGTCACGTGTGGGGAGATGCTGCT +
Preference number: 6 (lower is better)
Translates to: QTGCSTGKPAFP*EIRSHVWGDAA
Trigger: AGCAGCATCTCCCCACACGTGACTTCTTATTTCCAAGGGAAATGCTGGCTTTCCAGTGGAGCAGCCTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp GCGTTTCGCAAGCTCGTGTTCTGCTCTCGGAGCCGCTaGATCTCACTGGATGGAAAGTCTTTACTTATTTCT +
Preference number: 6 (lower is better)
Translates to: AFRKLVFCSRSR*ISLDGKSLLIS
Trigger: AGAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1
CDS CCA 72 bp AAGCCAGCATTTCCCTTGGAAATAAGAAGTCACGTGTaGGGAGATGCTGCTTCGCATCCGTCTGATGGGAAT +
Preference number: 6 (lower is better)
Translates to: KPAFPLEIRSHV*GDAASHPSDGN
Trigger: ATTCCCATCAGACGGATGCGAAGCAGCATCTCCCCACACGTGACTTCTTATTTCCAAGGGAAATGCTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp ATGCCCCGCCTGTGCCTTAGCTCCAATAACTGGGATTaGGCTGCAGGTGGCTTCATCTCTCAATTTAAAATT +
Preference number: 6 (lower is better)
Translates to: MPRLCLSSNNWD*AAGGFISQFKI
Trigger: AATTTTAAATTGAGAGATGAAGCCACCTGCAGCCCAATCCCAGTTATTGGAGCTAAGGCACAGGCGGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp TCTGTCCATTGCTATCAGCCTGGACCCATGATTTCCTaGTTGAGTCAGTGGATTGTGGTCTTCAACGTCACT +
Preference number: 6 (lower is better)
Translates to: SVHCYQPGPMIS*LSQWIVVFNVT
Trigger: AGTGACGTTGAAGACCACAATCCACTGACTCAACCAGGAAATCATGGGTCCAGGCTGATAGCAATGGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 72 bp GTTGAGCAATTTGAGCATCCCAGGCAGATTTTACAGTaGATGCATCTTCACGAAGTCAACGGCCTCTGGTGC +
Preference number: 6 (lower is better)
Translates to: VEQFEHPRQILQ*MHLHEVNGLWC
Trigger: GCACCAGAGGCCGTTGACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CAA 90 bp ACTGACTGCTCATGTGCTGGTGAAAACCTCCCTCTCCCACCACATTaGATCACAGAAGTCTTCCTCTGTGCTGATGATTCTTGTGGTATC +
Preference number: 6 (lower is better)
Translates to: TDCSCAGENLPLPPH*ITEVFLCADDSCGI
Trigger: GATACCACAAGAATCATCAGCACAGAGGAAGACTTCTGTGATCAAATGTGGTGGGAGAGGGAGGTTTTCACCAGCACATGAGCAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392343.3
ENST00000582885.1
ENST00000665763.1
CDS TCA 72 bp TTGAGCAATTTGAGCATCCCAGGCAGATTTTACAGTTaGTGCATCTTCACGAAGTCAACGGCCTCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: LSNLSIPGRFYS*CIFTKSTASGA
Trigger: AGCACCAGAGGCCGTTGACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS TCA 72 bp TGCCTTCTGGTCATCTATGCCTTTGTGTCTTTCAAGTaGACACAAGGAGAATCTGAGGACACCCAACCAGCA +
Preference number: 6 (lower is better)
Translates to: CLLVIYAFVSFK*TQGESEDTQPA
Trigger: TGCTGGTTGGGTGTCCTCAGATTCTCCTTGTGTTCACTTGAAAGACACAAAGGCATAGATGACCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392346.6
CDS TCA 72 bp CATGTGCTGGTGAAAACCTCCCTCTCCCACCACATTTaGTCACAGAAGTCTTCCTCTGTGCTGATGATTCTT +
Preference number: 6 (lower is better)
Translates to: HVLVKTSLSHHI*SQKSSSVLMIL
Trigger: AAGAATCATCAGCACAGAGGAAGACTTCTGTGATCAAATGTGGTGGGAGAGGGAGGTTTTCACCAGCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392343.3
ENST00000582885.1
ENST00000665763.1
CDS CCA 72 bp CACCCCACAGGTGAGGAGGAGATGTCTCCAAGTATCTaGACGATTCGAAGAAAATTCGAAGGAAACTTTGGT +
Preference number: 6 (lower is better)
Translates to: HPTGEEEMSPSI*TIRRKFEGNFG
Trigger: ACCAAAGTTTCCTTCGAATTTTCTTCGAATCGTCCAGATACTTGGAGACATCTCCTCCTCACCTGTGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS CCA 72 bp AGTGTCCATTTTAGATTTTCATACTGTTCCCGGTGGTaGTCAATCTCACCATTCTTGTCACTGTGGACGCGC +
Preference number: 6 (lower is better)
Translates to: SVHFRFSYCSRW*SISPFLSLWTR
Trigger: GCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS TCA 72 bp TTGAGCAATTTGAGCATCCCAGGCAGATTTTACAGTTaGTGCATCTTCACGAAGTTGGTCAATGGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: LSNLSIPGRFYS*CIFTKLVNGSV
Trigger: GACGCTGCCATTGACCAACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CCA 72 bp TCCAGTGTCCATTTTAGATTTTCATACTGTTCCCGGTaGTGGTCAATCTCACCATTCTTGTCACTGTGGACG +
Preference number: 6 (lower is better)
Translates to: SSVHFRFSYCSR*WSISPFLSLWT
Trigger: CGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGGACACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CAA 72 bp GTTGAGCAATTTGAGCATCCCAGGCAGATTTTACAGTaGATGCATCTTCACGAAGTTGGTCAATGGCAGCGT +
Preference number: 6 (lower is better)
Translates to: VEQFEHPRQILQ*MHLHEVGQWQR
Trigger: ACGCTGCCATTGACCAACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000665763.1
CDS CAA 90 bp GGACAGAGTTTGTTCTCTGTGCATCACTTCTGGATTCCTCTTGTGTaGAATGCAAACACTCAGAAAGAACAGCATGTTCCTTTTCAAAAC +
Preference number: 6 (lower is better)
Translates to: GQSLFSVHHFWIPLV*NANTQKEQHVPFQN
Trigger: GTTTTGAAAAGGAACATGCTGTTCTTTCTGAGTGTTTGCATTCAACACAAGAGGAATCCAGAAGTGATGCACAGAGAACAAACTCTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483145.1
CDS CCA 72 bp TTTCCAGACATCATCTACTGTCCCCAAAACCTTCTGTaGATTCATAGGTCACTATTGGTAACTATAGGTTAC +
Preference number: 6 (lower is better)
Translates to: FPDIIYCPQNLL*IHRSLLVTIGY
Trigger: GTAACCTATAGTTACCAATAGTGACCTATGAATCCACAGAAGGTTTTGGGGACAGTAGATGATGTCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327026.7
CDS GCA 72 bp ACATCTTCTAGATGCTTTTCCAGAGTTTTAAACTTATaGTTTAGAGTTCGTATTTCTGCTTCAAGGGCCAGA +
Preference number: 6 (lower is better)
Translates to: TSSRCFSRVLNL*FRVRISASRAR
Trigger: TCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAGTTTAAAACTCTGGAAAAGCATCTAGAAGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327026.7
ENST00000389641.9
ENST00000392343.3
ENST00000392347.5
ENST00000577530.1
ENST00000665763.1