Pregenerated sensors for CCDC54 (Homo sapiens)
Ensembl gene IDs: ENSG00000138483Ensembl transcript IDs: ENST00000261058.3
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACAGTATCTCTGGGTTATaGCCTGGGGTTCCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VNTWSLQVTFILCQAKQNSISGL*PGVPQE Trigger: TTCCTGAGGAACCCCAGGTCATAACCCAGAGATACT...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACTCAAAATGGGCCCAGTaGATGGACAGTATCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VNTWSLQVTFILCQAKQNSKWAQ*MDSISG Trigger: CCCAGAGATACTGTCCATTCACTGGGCCCATTTTGA...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | ACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACTGACCTTGGAGAGATTTaGAGTCCACATCTGCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: TWSLQVTFILCQAKQNITDLGEI*SPHLPS Trigger: GCTAGGCAGATGTGGACTTCAAATCTCTCCAAGGTC...AGTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | GAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATCTCTGGGTTATGACCTaGGGTTCCTCAGGAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: EYLEPPGYIYFVPSKAEHLWVMT*GSSGRM Trigger: CATTCTTCCTGAGGAACCCCAGGTCATAACCCAGAG...ATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACTGGAGAGACAGATTGTaGTCAAGCTCAAAATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VNTWSLQVTFILCQAKQNWRDRL*SSSKWA Trigger: GGCCCATTTTGAGCTTGACCACAATCTGTCTCTCCA...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACAGTGGGATATCCAGTTaGATCTTGGTGCCGAATCTT | + |
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Preference number: 4 (lower is better) Translates to: VNTWSLQVTFILCQAKQNSGISS*ILVPNL Trigger: AAGATTCGGCACCAAGATTCAACTGGATATCCCACT...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | TACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACAATGGACAGTATCTCTaGGTTATGACCTGGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: YLEPPGYIYFVPSKAEHNNGQYL*VMTWGS Trigger: GGAACCCCAGGTCATAACCCAGAGATACTGTCCATT...GTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACTTTCTCTGGTTCTGCTaGAGAGATTTCCATGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VNTWSLQVTFILCQAKQNFLWFC*RDFHVC Trigger: ACAGACATGGAAATCTCTTCAGCAGAACCAGAGAAA...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR GCA 90 bp | TGTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAATTTGAAGTCCACATCTaGCTAGCAGCAGCTTTTACC | + |
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Preference number: 4 (lower is better) Translates to: CEYLEPPGYIYFVPSKAEFEVHI*LAAAFT Trigger: GGTAAAAGCTGCTGCTAGGCAGATGTGGACTTCAAA...TTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACCATCTTAGAACACTCTaGAAATCATCAGCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VNTWSLQVTFILCQAKQNHLRTL*KSSATA Trigger: TGCTGTGGCTGATGATTTCCAGAGTGTTCTAAGATG...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | TACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACTGGACTTTGGATAACTaGGCACTTTCTCTGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: YLEPPGYIYFVPSKAEHNWTLDN*ALSLVL Trigger: CAGAACCAGAGAAAGTGCCCAGTTATCCAAAGTCCA...GTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | TGTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAAATGGTCAGTGGACTTTaGATAACTGGGCACTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CEYLEPPGYIYFVPSKAEMVSGL*ITGHFL Trigger: GAGAAAGTGCCCAGTTATCCAAAGTCCACTGACCAT...TTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | TACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACTCTCAAGATGGTCAGTaGACTTTGGATAACTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: YLEPPGYIYFVPSKAEHNSQDGQ*TLDNWA Trigger: TGCCCAGTTATCCAAAGTCCACTGACCATCTTGAGA...GTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | TACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACGTACATCTTTCATGGTaGAACAAGAGGCAAGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: YLEPPGYIYFVPSKAEHNVHLSW*NKRQGV Trigger: AACACCTTGCCTCTTGTTTCACCATGAAAGATGTAC...GTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACACCTCCATCTGTTTTTaGTACAAGTCAGTCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VNTWSLQVTFILCQAKQNTSICF*YKSVFS Trigger: GGAAAAGACTGACTTGTATCAAAAACAGATGGAGGT...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | TACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACCAAGAGGCAAGGTGTTaGAAAACAGAATCACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: YLEPPGYIYFVPSKAEHNQEARC*KTESQE Trigger: TTCCTGTGATTCTGTTTTCCAACACCTTGCCTCTTG...GTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | AATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATATGTCAGTCATTTGGCTaGAAAGTTCAACTTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTWSLQVTFILCQAKQNICQSFG*KVQLEQ Trigger: CTGCTCAAGTTGAACTTTTCAGCCAAATGACTGACA...TATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | TGTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAATGTAAAGCAGTTCTGTaGTTTCTTTACCCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CEYLEPPGYIYFVPSKAECKAVL*FLYPFL Trigger: GAGAAAGGGGTAAAGAAATCACAGAACTGCTTTACA...TTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | TGTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACTCCTTGATGCATTTTaGTGGTTACGTTTCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: CEYLEPPGYIYFVPSKAELLDAF*WLRFFR Trigger: TCTGAAGAAACGTAACCATCAAAATGCATCAAGGAG...TTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | ACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACTAGCCGTAAATATTGTTaGAGATGGAGAGACAGATTG | + |
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Preference number: 4 (lower is better) Translates to: TWSLQVTFILCQAKQNITSRKYC*RWRDRL Trigger: CAATCTGTCTCTCCATCTTCAACAATATTTACGGCT...AGTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | TGTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACAGCTTTTACCCTTTTaGTGTGAAGTGTGTACATCT | + |
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Preference number: 4 (lower is better) Translates to: CEYLEPPGYIYFVPSKAEQLLPF*CEVCTS Trigger: AGATGTACACACTTCACACCAAAAGGGTAAAAGCTG...TTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | TGTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATCAGATGTCACAGTaGGATATCCAGTTGAATCTT | + |
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Preference number: 4 (lower is better) Translates to: CEYLEPPGYIYFVPSKAEHQMSQ*DIQLNL Trigger: AAGATTCAACTGGATATCCCACTGTGACATCTGATG...TTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | TACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACATCTTGGAGCACTACTaGAAGATTCATTTTTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: YLEPPGYIYFVPSKAEHNILEHY*KIHFSV Trigger: GACGGAAAAATGAATCTTCCAGTAGTGCTCCAAGAT...GTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | GAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATGCAGTTTTAACATCTTaGAGCACTACTGGAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: EYLEPPGYIYFVPSKAEHAVLTS*STTGRF Trigger: GAATCTTCCAGTAGTGCTCCAAGATGTTAAAACTGC...ATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | TACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACTTTACCCTTTTGGTGTaGAGTGTGTACATCTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: YLEPPGYIYFVPSKAEHNFTLLV*SVYIFH Trigger: ATGAAAGATGTACACACTTCACACCAAAAGGGTAAA...GTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | GAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATTTTTTCAAAGCTCCTTaGTGCATTTTGATGGTTACG | + |
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Preference number: 4 (lower is better) Translates to: EYLEPPGYIYFVPSKAEHFFKAP*CILMVT Trigger: CGTAACCATCAAAATGCATCAAGGAGCTTTGAAAAA...ATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACTTATCCAGTTGAATCTTaGTGCCGAATCTTACATTTG | + |
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Preference number: 4 (lower is better) Translates to: TWSLQVTFILCQAKQNITYPVES*CRILHL Trigger: CAAATGTAAGATTCGGCACCAAGATTCAACTGGATA...AGTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR TCA 90 bp | AATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATACTGAAAAGTTCAACTTaGGCAGTTTTAACATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: NTWSLQVTFILCQAKQNILKSST*AVLTSW Trigger: CCAAGATGTTAAAACTGCTCAAGTTGAACTTTTCAG...TATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | GAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATTCTCTTACTATTTGTTaGATGCCTTTCCTGATAACA | + |
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Preference number: 4 (lower is better) Translates to: EYLEPPGYIYFVPSKAEHSLTIC*MPFLIT Trigger: TGTTATCAGGAAAGGCATCCAACAAATAGTAAGAGA...ATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | AATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATACTAGACAATGTATCGTaGAGCAGGAATTCTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: NTWSLQVTFILCQAKQNILDNVS*SRNSEF Trigger: AAATTCAGAATTCCTGCTCCACGATACATTGTCTAG...TATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CCA 90 bp | AATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACTTTTGGTATCATATaGACAATGTCAGTCATTTGG | + |
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Preference number: 4 (lower is better) Translates to: NTWSLQVTFILCQAKQNITFGII*TMSVIW Trigger: CCAAATGACTGACATTGTCCATATGATACCAAAAGT...TATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CCA 90 bp | CTCAAAATGGGCCCAGTGAATGGACAGTATCTCTGGGTTATGACCTaGGGTTCCTCAGGAAGAATGGTTGGCCTAGAAAGAAGCCACTGG | + |
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Preference number: 5 (lower is better) Translates to: LKMGPVNGQYLWVMT*GSSGRMVGLERSHW Trigger: CCAGTGGCTTCTTTCTAGGCCAACCATTCTTCCTGAGGAACCCCAGGTCATAACCCAGAGATACTGTCCATTCACTGGGCCCATTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CCA 90 bp | ATTGTGGTCAAGCTCAAAATGGGCCCAGTGAATGGACAGTATCTCTaGGTTATGACCTGGGGTTCCTCAGGAAGAATGGTTGGCCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: IVVKLKMGPVNGQYL*VMTWGSSGRMVGLE Trigger: TTCTAGGCCAACCATTCTTCCTGAGGAACCCCAGGTCATAACCCAGAGATACTGTCCATTCACTGGGCCCATTTTGAGCTTGACCACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CCA 90 bp | ACCTGGGGTTCCTCAGGAAGAATGGTTGGCCTAGAAAGAAGCCACTaGATGAATTCTTCTAACTTGGTAGCACTGAGGAAAAATGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: TWGSSGRMVGLERSH*MNSSNLVALRKNVH Trigger: ATGGACATTTTTCCTCAGTGCTACCAAGTTAGAAGAATTCATCCAGTGGCTTCTTTCTAGGCCAACCATTCTTCCTGAGGAACCCCAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS TCA 90 bp | TTTGAAGTCCACATCTGCCTAGCAGCAGCTTTTACCCTTTTGGTGTaGAGTGTGTACATCTTTCATGGTGAAACAAGAGGCAAGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: FEVHICLAAAFTLLV*SVYIFHGETRGKVL Trigger: CAACACCTTGCCTCTTGTTTCACCATGAAAGATGTACACACTTCACACCAAAAGGGTAAAAGCTGCTGCTAGGCAGATGTGGACTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACGATGGTCAGTGGACTTaGGATAACTGGGCACTTTCT | + |
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Preference number: 5 (lower is better) Translates to: VNTWSLQVTFILCQAKQNDGQWT*DNWALS Trigger: AGAAAGTGCCCAGTTATCCAAAGTCCACTGACCATC...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | TACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACCAGTGGGATATCCAGTaGAATCTTGGTGCCGAATCT | + |
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Preference number: 5 (lower is better) Translates to: YLEPPGYIYFVPSKAEHNQWDIQ*NLGAES Trigger: AGATTCGGCACCAAGATTCAACTGGATATCCCACTG...GTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACAGATGGAGAGACAGATaGTGGTCAAGCTCAAAATGG | + |
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Preference number: 5 (lower is better) Translates to: VNTWSLQVTFILCQAKQNRWRDR*WSSSKW Trigger: CCATTTTGAGCTTGACCACAATCTGTCTCTCCATCT...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS TCA 90 bp | TCTCCCTCCAGAATCTCTAGACAATGTATCGTGGAGCAGGAATTCTaGATTTCCAGTTCTGTCACCTTCTTCTTTAATGCCTTGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: SPSRISRQCIVEQEF*ISSSVTFFFNALMS Trigger: AGACATCAAGGCATTAAAGAAGAAGGTGACAGAACTGGAAATTCAGAATTCCTGCTCCACGATACATTGTCTAGAGATTCTGGAGGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | AATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAAGAGACTGTCTGACCTaGGAGAGATTTGAAGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: NTWSLQVTFILCQAKQNIRDCLT*ERFEVH Trigger: GTGGACTTCAAATCTCTCCAAGGTCAGACAGTCTCT...TATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACCTTCAGAGTTGCTGGTaGTATGAGTTTGTAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: VNTWSLQVTFILCQAKQNLQSCW*YEFVKQ Trigger: CTGCTTTACAAACTCATACAACCAGCAACTCTGAAG...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACAGCAGTTTTAACATCTaGGAGCACTACTGGAAGATT | + |
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Preference number: 5 (lower is better) Translates to: VNTWSLQVTFILCQAKQNSSFNI*EHYWKI Trigger: AATCTTCCAGTAGTGCTCCAAGATGTTAAAACTGCT...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | TACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACATAACTCCTTCTCTTACTATTaGTTGGATGCCTTTCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: YLEPPGYIYFVPSKAEHNSFSYY*LDAFPD Trigger: ATCAGGAAAGGCATCCAACAAATAGTAAGAGAAGGA...GTTATGTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | TGTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAAGACAATGTCAGTCATTaGGCTGAAAAGTTCAACTTG | + |
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Preference number: 5 (lower is better) Translates to: CEYLEPPGYIYFVPSKAEDNVSH*AEKFNL Trigger: CAAGTTGAACTTTTCAGCCAAATGACTGACATTGTC...TTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | GTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAACTCTTTTCCTGGACTTTaGGTATCATATGGACAATGT | + |
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Preference number: 5 (lower is better) Translates to: VNTWSLQVTFILCQAKQNSFPGL*VSYGQC Trigger: ACATTGTCCATATGATACCAAAAGTCCAGGAAAAGA...GTTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CCA 90 bp | CGTCATAACTATCATCATCTTGATTACAATCATCAGATGTCACAGTaGGATATCCAGTTGAATCTTGGTGCCGAATCTTACATTTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: RHNYHHLDYNHQMSQ*DIQLNLGAESYICG Trigger: ACCACAAATGTAAGATTCGGCACCAAGATTCAACTGGATATCCCACTGTGACATCTGATGATTGTAATCAAGATGATGATAGTTATGACG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | TGTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAATTCTCTTACTATTTGTaGGATGCCTTTCCTGATAAC | + |
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Preference number: 5 (lower is better) Translates to: CEYLEPPGYIYFVPSKAEFSYYL*DAFPDN Trigger: GTTATCAGGAAAGGCATCCAACAAATAGTAAGAGAA...TTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS-3UTR CAA 90 bp | TGTGAATACTTGGAGCCTCCAGGTTACATTTATTTTGTGCCAAGCAAAGCAGAAGCTGAAAAGTTCAACTaGAGCAGTTTTAACATCTTG | + |
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Preference number: 5 (lower is better) Translates to: CEYLEPPGYIYFVPSKAEAEKFN*SSFNIL Trigger: CAAGATGTTAAAACTGCTCAAGTTGAACTTTTCAGC...TTCTGCTTTGCTTGGCACAAAATAAATGTAACCTGGAGGCTCCAAGTATTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS TCA 90 bp | GGTATCATATGGACAATGTCAGTCATTTGGCTGAAAAGTTCAACTTaGGCAGTTTTAACATCTTGGAGCACTACTGGAAGATTCATTTTT | + |
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Preference number: 5 (lower is better) Translates to: GIIWTMSVIWLKSST*AVLTSWSTTGRFIF Trigger: AAAAATGAATCTTCCAGTAGTGCTCCAAGATGTTAAAACTGCTCAAGTTGAACTTTTCAGCCAAATGACTGACATTGTCCATATGATACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS TCA 90 bp | ATCATCTTGATTACAATCATCAGATGTCACAGTGGGATATCCAGTTaGATCTTGGTGCCGAATCTTACATTTGTGGTAAACATTTTTAAG | + |
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Preference number: 5 (lower is better) Translates to: IILITIIRCHSGISS*ILVPNLTFVVNIFK Trigger: CTTAAAAATGTTTACCACAAATGTAAGATTCGGCACCAAGATTCAACTGGATATCCCACTGTGACATCTGATGATTGTAATCAAGATGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CCA 72 bp | GGCCCAGTGAATGGACAGTATCTCTGGGTTATGACCTaGGGTTCCTCAGGAAGAATGGTTGGCCTAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: GPVNGQYLWVMT*GSSGRMVGLER Trigger: TCTTTCTAGGCCAACCATTCTTCCTGAGGAACCCCAGGTCATAACCCAGAGATACTGTCCATTCACTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS TCA 72 bp | CACATCTGCCTAGCAGCAGCTTTTACCCTTTTGGTGTaGAGTGTGTACATCTTTCATGGTGAAACAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: HICLAAAFTLLV*SVYIFHGETRG Trigger: GCCTCTTGTTTCACCATGAAAGATGTACACACTTCACACCAAAAGGGTAAAAGCTGCTGCTAGGCAGATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CCA 72 bp | TCCTCAGGAAGAATGGTTGGCCTAGAAAGAAGCCACTaGATGAATTCTTCTAACTTGGTAGCACTGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SSGRMVGLERSH*MNSSNLVALRK Trigger: TTTCCTCAGTGCTACCAAGTTAGAAGAATTCATCCAGTGGCTTCTTTCTAGGCCAACCATTCTTCCTGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS TCA 72 bp | AACATTTTTAAGAGACTGTCTGACCTTGGAGAGATTTaGAGTCCACATCTGCCTAGCAGCAGCTTTTACCCT | + |
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Preference number: 6 (lower is better) Translates to: NIFKRLSDLGEI*SPHLPSSSFYP Trigger: AGGGTAAAAGCTGCTGCTAGGCAGATGTGGACTTCAAATCTCTCCAAGGTCAGACAGTCTCTTAAAAATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS TCA 72 bp | TGGACAATGTCAGTCATTTGGCTGAAAAGTTCAACTTaGGCAGTTTTAACATCTTGGAGCACTACTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: WTMSVIWLKSST*AVLTSWSTTGR Trigger: TCTTCCAGTAGTGCTCCAAGATGTTAAAACTGCTCAAGTTGAACTTTTCAGCCAAATGACTGACATTGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CAA 72 bp | ATGGACAATGTCAGTCATTTGGCTGAAAAGTTCAACTaGAGCAGTTTTAACATCTTGGAGCACTACTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: MDNVSHLAEKFN*SSFNILEHYWK Trigger: CTTCCAGTAGTGCTCCAAGATGTTAAAACTGCTCAAGTTGAACTTTTCAGCCAAATGACTGACATTGTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS TCA 72 bp | ATTACAATCATCAGATGTCACAGTGGGATATCCAGTTaGATCTTGGTGCCGAATCTTACATTTGTGGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: ITIIRCHSGISS*ILVPNLTFVVN Trigger: GTTTACCACAAATGTAAGATTCGGCACCAAGATTCAACTGGATATCCCACTGTGACATCTGATGATTGTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CCA 72 bp | TATCATCATCTTGATTACAATCATCAGATGTCACAGTaGGATATCCAGTTGAATCTTGGTGCCGAATCTTAC | + |
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Preference number: 6 (lower is better) Translates to: YHHLDYNHQMSQ*DIQLNLGAESY Trigger: GTAAGATTCGGCACCAAGATTCAACTGGATATCCCACTGTGACATCTGATGATTGTAATCAAGATGATGATA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CAA 72 bp | GATTACAATCATCAGATGTCACAGTGGGATATCCAGTaGAATCTTGGTGCCGAATCTTACATTTGTGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: DYNHQMSQWDIQ*NLGAESYICGK Trigger: TTTACCACAAATGTAAGATTCGGCACCAAGATTCAACTGGATATCCCACTGTGACATCTGATGATTGTAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CAA 90 bp | TGGTATCATATGGACAATGTCAGTCATTTGGCTGAAAAGTTCAACTaGAGCAGTTTTAACATCTTGGAGCACTACTGGAAGATTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: WYHMDNVSHLAEKFN*SSFNILEHYWKIHF Trigger: AAAATGAATCTTCCAGTAGTGCTCCAAGATGTTAAAACTGCTCAAGTTGAACTTTTCAGCCAAATGACTGACATTGTCCATATGATACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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| CDS CAA 72 bp | TGGAAGATTCATTTTTCCGTCATAACTATCATCATCTaGATTACAATCATCAGATGTCACAGTGGGATATCC | + |
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Preference number: 6 (lower is better) Translates to: WKIHFSVITIII*ITIIRCHSGIS Trigger: GGATATCCCACTGTGACATCTGATGATTGTAATCAAGATGATGATAGTTATGACGGAAAAATGAATCTTCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000261058.3 |
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