RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC51 (Homo sapiens)

Ensembl gene IDs: ENSG00000164051

Ensembl transcript IDs: ENST00000395694.7, ENST00000412398.6, ENST00000438370.1, ENST00000442740.1, ENST00000446140.1, ENST00000447018.5

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTaGTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTC +
Preference number: 1 (lower is better)
Translates to: LSTKRSMPAGEPHRY*SFRLRLYMPPKARF
Trigger: GAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR GCA 90 bp CTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTaGTACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCA +
Preference number: 1 (lower is better)
Translates to: LLQIEVVHAPKGSLH*YDSLLKSTFTAIAS
Trigger: TGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR CAA 90 bp CGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATaGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATT +
Preference number: 2 (lower is better)
Translates to: RSMPAGEPHRYCSFR*RLYMPPKARFIATI
Trigger: AATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR-3UTR GCA 90 bp CCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCACATTCACAGCTATTaGCTCAGACCCTCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: PAGEPHRYCSFRLRLYMPHIHSY*LRPSGG
Trigger: TCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTG...GGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR-3UTR GCA 90 bp CCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTCACATTCACAGCTATTaGCTCAGACCCTCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: PCLQSEACLLVSHTDTAPHIHSY*LRPSGG
Trigger: TCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTG...AGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR CAA 90 bp ATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTaGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTAC +
Preference number: 2 (lower is better)
Translates to: MPAGEPHRYCSFRLR*YMPPKARFIATILY
Trigger: GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR-3UTR GCA 90 bp GTTTTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGCACATTCACAGCTATTaGCTCAGACCCTCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: VLIINVNEPCLQSEACLLHIHSY*LRPSGG
Trigger: TCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTG...CAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR-3UTR GCA 90 bp GTTTTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGAAAGGCTCGCTTCATTaGTACGATTCTCTACTTAAA +
Preference number: 2 (lower is better)
Translates to: VLIINVNEPCLQSEACLLKGSLH*YDSLLK
Trigger: TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTT...CAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR GCA 72 bp AAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTaGTCCTTCAGATTGAGGTTGTACATGCCCCCAAAG +
Preference number: 3 (lower is better)
Translates to: KRSMPAGEPHRY*SFRLRLYMPPK
Trigger: CTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR TCA 72 bp ATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTaGGCCACACAGATACTGCTCCTTCAGATTGAGGTT +
Preference number: 3 (lower is better)
Translates to: MNLVYKAKHACW*ATQILLLQIEV
Trigger: AACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR GCA 72 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTaGTACGATTCTCTACTTAAATCCACATTCACAGCT +
Preference number: 3 (lower is better)
Translates to: IEVVHAPKGSLH*YDSLLKSTFTA
Trigger: AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR GCA 72 bp ATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATaGCTGCTGGTGAGCCACACAGATACTGCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: INVNEPCLQSEA*LLVSHTDTAPS
Trigger: TGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGCTGGGAGGCGGTGGTaGAGCCCCAGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CLQSEACLLVSHTDTAPSAGRRW*SPRATS
Trigger: GGAGGTGGCCCTGGGGCTGCACCACCGCCTCCCAGC...TGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGGGCTGGCTTGGGCCTaGGCTGGCGTGGCCCGACCA +
Preference number: 4 (lower is better)
Translates to: CLQSEACLLVSHTDTAPSGLAWA*AGVARP
Trigger: TGGTCGGGCCACGCCAGCCCAGGCCCAAGCCAGCCC...TGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412398.6
CDS-3UTR CCA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGCCCAGAGTCCTGCCCTaGCCCAGCAGCATGTACCAG +
Preference number: 4 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGPRVLP*PSSMYQ
Trigger: CTGGTACATGCTGCTGGGCCAGGGCAGGACTCTGGG...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGGGCTTGGGCCTGGGCTaGCGTGGCCCGACCAATCGT +
Preference number: 4 (lower is better)
Translates to: CSFRLRLYMPPKARFIATGLGLG*RGPTNR
Trigger: ACGATTGGTCGGGCCACGCCAGCCCAGGCCCAAGCC...CGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412398.6
CDS-3UTR TCA 90 bp CCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTGAGGTCGCTCGTTGCTaGATGCTGTGCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PCLQSEACLLVSHTDTAPEVARC*MLCPRA
Trigger: AGCCCTGGGGCACAGCATTCAGCAACGAGCGACCTC...AGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCGAGGTCGCTCGTTGCTaGATGCTGTGCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PAGEPHRYCSFRLRLYMPEVARC*MLCPRA
Trigger: AGCCCTGGGGCACAGCATTCAGCAACGAGCGACCTC...GGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGAGGGCTGGCTTGGGCCTaGGCTGCAGAGAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: STKRSMPAGEPHRYCSFRGLAWA*AAESPG
Trigger: ACCAGGACTCTCTGCAGCCCAGGCCCAAGCCAGCCC...TCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS-3UTR TCA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGCCAGGACTGAGCCAATaGGGGACCAGTTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGPGLSQ*GTSSWS
Trigger: GGACCAAGAACTGGTCCCTCATTGGCTCAGTCCTGG...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp ATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCAGCTGGGAGGCGGTGGTaGAGCCCCAGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: MPPKARFIATILYLNPHSAGRRW*SPRATS
Trigger: GGAGGTGGCCCTGGGGCTGCACCACCGCCTCCCAGC...TGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGACTGACTGTCCTCCCTaGAGACACGGTCCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGTDCPP*RHGPSG
Trigger: ACCGCTTGGACCGTGTCTCCAGGGAGGACAGTCAGT...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGTCCACCATGAGATTGTaGAGGTCCCTCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGSTMRL*RSLCWR
Trigger: CCGCCAGCAGAGGGACCTCCACAATCTCATGGTGGA...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCAGGACTGAGCCAATaGGGGACCAGTTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PAGEPHRYCSFRLRLYMPPGLSQ*GTSSWS
Trigger: GGACCAAGAACTGGTCCCTCATTGGCTCAGTCCTGG...GGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTCCCTCAGGTCCACCATaGGATTGTGGAGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PCLQSEACLLVSHTDTAPPSGPP*DCGGPS
Trigger: AGAGGGACCTCCACAATCTCATGGTGGACCTGAGGG...AGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGTCGCTCAGAGTCTTCTaGACGCAGATAGGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGSLRVF*TQIGCA
Trigger: CGCACAGCCTATCTGCGTGCAGAAGACTCTGAGCGA...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGTGTGACCCAGAGTCCTaGCCTGGCCCAGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: YLNPHSQLLPQTLWRRGQCDPES*PGPAAC
Trigger: ACATGCTGCTGGGCCAGGGCAGGACTCTGGGTCACA...CTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCGGGCATAGCCCCGTCTaGTGGTTCCACCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FRLRLYMPPKARFIATILGHSPV*WFHQAW
Trigger: CCAGGCCTGGTGGAACCAGCAGACGGGGCTATGCCC...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGCTCCGAACCAGTACGTaGGGCACACCCACGATGTGC +
Preference number: 4 (lower is better)
Translates to: YLNPHSQLLPQTLWRRGQLRTST*GTPTMC
Trigger: GCACATCGTGGGTGTGCCCCACGTACTGGTTCGGAG...CTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS-3UTR CCA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGCTACATCTCTGTCTCTaGTCGGGGGACTACCTGCCT +
Preference number: 4 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGLHLCL*SGDYLP
Trigger: AGGCAGGTAGTCCCCCGACCAGAGACAGAGATGTAG...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp AAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGCCCAGAAGAGGTCACTaGGGTGTGAGCTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: KRSMPAGEPHRYCSFRLRPRRGH*GVSSVT
Trigger: GGTGACAGAGCTCACACCCCAGTGACCTCTTCTGGG...CCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442740.1
CDS-3UTR TCA 90 bp AATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGAGGTCGCTCGTTGCTaGATGCTGTGCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NEPCLQSEACLLVSHTDTEVARC*MLCPRA
Trigger: AGCCCTGGGGCACAGCATTCAGCAACGAGCGACCTC...AGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCGCCAGTTCCAAGTACTaGCTGTCCTCCCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: PAGEPHRYCSFRLRLYMPASSKY*LSSLET
Trigger: TGTCTCCAGGGAGGACAGTCAGTACTTGGAACTGGC...GGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp AAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGGCCAGTTCCAAGTACTaGCTGTCCTCCCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: KRSMPAGEPHRYCSFRLRASSKY*LSSLET
Trigger: TGTCTCCAGGGAGGACAGTCAGTACTTGGAACTGGC...CCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCGTGCGCTCCTTCTCATaGCTTTCCCGCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: HRYCSFRLRLYMPPKARFVRSFS*LSRTAA
Trigger: TGCAGCTGTGCGGGAAAGTCATGAGAAGGAGCGCAC...GAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGGTGCGCTCCTTCTCATaGCTTTCCCGCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CSFRLRLYMPPKARFIATVRSFS*LSRTAA
Trigger: TGCAGCTGTGCGGGAAAGTCATGAGAAGGAGCGCAC...CGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCAAGCATGCCTGCTGGTaGGCCACACAGATACTGCTC +
Preference number: 4 (lower is better)
Translates to: PAGEPHRYCSFRLRLYMPKHACW*ATQILL
Trigger: GAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTT...GGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGAGGTCACTGGGGTGTaGGCTCTGTCACCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: YLNPHSQLLPQTLWRRGQEVTGV*ALSPFP
Trigger: AGGGAAAGGTGACAGAGCTCACACCCCAGTGACCTC...CTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442740.1
CDS-3UTR GCA 90 bp CCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCATCATCCTGAGATCTaGAGTGCTCTTCCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: PAGEPHRYCSFRLRLYMPHHPEI*SALPAH
Trigger: GTGCGCGGGAAGAGCACTGCAGATCTCAGGATGATG...GGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS-3UTR GCA 90 bp AAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTCCTGCAGCATCCTGTaGTCGAGAGTAGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KRSMPAGEPHRYCSFRLRSCSIL*SRVASS
Trigger: GGAACTGGCTACTCTCGAGCACAGGATGCTGCAGGA...CCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp CCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCCTGCAGCATCCTGTaGTCGAGAGTAGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PCLQSEACLLVSHTDTAPSCSIL*SRVASS
Trigger: GGAACTGGCTACTCTCGAGCACAGGATGCTGCAGGA...AGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGTGTGACCCAGAGTCCTaGCCTGGCCCAGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: SLLKSTFTAIASDPLEEGCDPES*PGPAAC
Trigger: ACATGCTGCTGGGCCAGGGCAGGACTCTGGGTCACA...CCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp AAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGCACCAGGCCTGGGTGTaGTGCAGACTTTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: KRSMPAGEPHRYCSFRLRHQAWV*CRLYKL
Trigger: CAGCTTGTAAAGTCTGCAGCACACCCAGGCCTGGTG...CCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAAGGGCATAGCCCCGTCTaGTGGTTCCACCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EVVHAPKGSLHCYDSLLKGHSPV*WFHQAW
Trigger: CCAGGCCTGGTGGAACCAGCAGACGGGGCTATGCCC...TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp CCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCACACAGGCTCAGCTaGATTCCCAGCAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: PAGEPHRYCSFRLRLYMPPHRLS*IPSKAF
Trigger: GAATGCCTTGCTGGGAATGCAGCTGAGCCTGTGTGG...GGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442740.1
CDS-3UTR CCA 90 bp CCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTGTTCCGATTCTACCCTaGCAGGACAACCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: PCLQSEACLLVSHTDTAPVPILP*QDNPSS
Trigger: GGAGCTAGGGTTGTCCTGCCAGGGTAGAATCGGAAC...AGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395694.7
ENST00000442740.1
CDS-3UTR CCA 90 bp AAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTCTGTCACCTTTCCCTaGGCCTCTCGAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: KRSMPAGEPHRYCSFRLRSVTFP*ASRTSL
Trigger: CAACGAGGTTCGAGAGGCCCAGGGAAAGGTGACAGA...CCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCACTGACTGTCCTCCCTaGAGACACGGTCCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: HRYCSFRLRLYMPPKARFTDCPP*RHGPSG
Trigger: ACCGCTTGGACCGTGTCTCCAGGGAGGACAGTCAGT...GAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAACTGACTGTCCTCCCTaGAGACACGGTCCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: CLQSEACLLVSHTDTAPSTDCPP*RHGPSG
Trigger: ACCGCTTGGACCGTGTCTCCAGGGAGGACAGTCAGT...TGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGTCCACCATGAGATTGTaGAGGTCCCTCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: CSFRLRLYMPPKARFIATSTMRL*RSLCWR
Trigger: CCGCCAGCAGAGGGACCTCCACAATCTCATGGTGGA...CGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGAGCCAGTTCCAAGTACTaGCTGTCCTCCCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: STKRSMPAGEPHRYCSFRASSKY*LSSLET
Trigger: TGTCTCCAGGGAGGACAGTCAGTACTTGGAACTGGC...TCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACACAGGGCCCCCAGGACTaGGCCAATGAGGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTQGPQD*ANEGPV
Trigger: AACTGGTCCCTCATTGGCTCAGTCCTGGGGGCCCTG...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp CACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCTCCTGCAGCATCCTGTaGTCGAGAGTAGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HRYCSFRLRLYMPPKARFSCSIL*SRVASS
Trigger: GGAACTGGCTACTCTCGAGCACAGGATGCTGCAGGA...GAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGAGCCTCTTCTCCTCCTaGAGCATCCTGTGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: YLNPHSQLLPQTLWRRGQSLFSS*SILCSR
Trigger: TCTCGAGCACAGGATGCTGCAGGAGGAGAAGAGGCT...CTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp ACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGCCTCTTCTCCTCCTaGAGCATCCTGTGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: TKRSMPAGEPHRYCSFRLSLFSS*SILCSR
Trigger: TCTCGAGCACAGGATGCTGCAGGAGGAGAAGAGGCT...CAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGCACGCAGATAGGCTGTaGGAAGCCTCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CSFRLRLYMPPKARFIATHADRL*EASSPP
Trigger: AGGAGGAGAAGAGGCTTCGCACAGCCTATCTGCGTG...CGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGACACGCAGATAGGCTGTaGGAAGCCTCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STKRSMPAGEPHRYCSFRHADRL*EASSPP
Trigger: AGGAGGAGAAGAGGCTTCGCACAGCCTATCTGCGTG...TCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCATCGCTCAGAGTCTTCTaGACGCAGATAGGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: CLQSEACLLVSHTDTAPSSLRVF*TQIGCA
Trigger: CGCACAGCCTATCTGCGTGCAGAAGACTCTGAGCGA...TGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGGGCATAGCCCCGTCTaGTGGTTCCACCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YDSLLKSTFTAIASDPLEGHSPV*WFHQAW
Trigger: CCAGGCCTGGTGGAACCAGCAGACGGGGCTATGCCC...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp AAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGCTACAAAGCGAAGCATaGCTGCTGGTGAGCCACACA +
Preference number: 4 (lower is better)
Translates to: KRSMPAGEPHRYCSFRLRLQSEA*LLVSHT
Trigger: TGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAG...CCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACACCACGATGTGCTGCATaGCAAACCCAGGGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTPRCAA*QTQGCA
Trigger: GGCGCAGCCCTGGGTTTGCCATGCAGCACATCGTGG...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS-3UTR CCA 90 bp CACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCTGTCCCACCAAGTCTTaGCTGTGGAGGTCGCTCGTT +
Preference number: 4 (lower is better)
Translates to: HRYCSFRLRLYMPPKARFCPTKS*LWRSLV
Trigger: AACGAGCGACCTCCACAGCCAAGACTTGGTGGGACA...GAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGTCACCTCCTTCAGCTTaGCCTGGTGAACTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGSPPSA*PGELPS
Trigger: ACTTGGAAGTTCACCAGGCCAAGCTGAAGGAGGTGA...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGTCTCGAATGGCCTCTTaGAGACTCACAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: YLNPHSQLLPQTLWRRGQSRMAS*RLTGPF
Trigger: GAAGGGGCCTGTGAGTCTCCAAGAGGCCATTCGAGA...CTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCTCTCGAATGGCCTCTTaGAGACTCACAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HRYCSFRLRLYMPPKARFSRMAS*RLTGPF
Trigger: GAAGGGGCCTGTGAGTCTCCAAGAGGCCATTCGAGA...GAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTACGCCTGTTCTCGAATaGCCTCTTGGAGACTCACAG +
Preference number: 4 (lower is better)
Translates to: PCLQSEACLLVSHTDTAPTPVLE*PLGDSQ
Trigger: CTGTGAGTCTCCAAGAGGCCATTCGAGAACAGGCGT...AGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAACCCAGAGTCCTGCCCTaGCCCAGCAGCATGTACCAG +
Preference number: 4 (lower is better)
Translates to: EVVHAPKGSLHCYDSLLKPRVLP*PSSMYQ
Trigger: CTGGTACATGCTGCTGGGCCAGGGCAGGACTCTGGG...TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGACTACATCTCTGTCTCTaGTCGGGGGACTACCTGCCT +
Preference number: 4 (lower is better)
Translates to: STKRSMPAGEPHRYCSFRLHLCL*SGDYLP
Trigger: AGGCAGGTAGTCCCCCGACCAGAGACAGAGATGTAG...TCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCCTACATCTCTGTCTCTaGTCGGGGGACTACCTGCCT +
Preference number: 4 (lower is better)
Translates to: HRYCSFRLRLYMPPKARFLHLCL*SGDYLP
Trigger: AGGCAGGTAGTCCCCCGACCAGAGACAGAGATGTAG...GAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
3UTR CAA 72 bp GGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTaGTACATGCCCCCAAAGGCTCGCTTCATTGCTACG +
Preference number: 4 (lower is better)
Translates to: GEPHRYCSFRLR*YMPPKARFIAT
Trigger: CGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp AATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGTGCGCTCCTTCTCATaGCTTTCCCGCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NEPCLQSEACLLVSHTDTVRSFS*LSRTAA
Trigger: TGCAGCTGTGCGGGAAAGTCATGAGAAGGAGCGCAC...AGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGCAGGGCCCCCAGGACTaGGCCAATGAGGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: YDSLLKSTFTAIASDPLEQGPQD*ANEGPV
Trigger: AACTGGTCCCTCATTGGCTCAGTCCTGGGGGCCCTG...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp AGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCAGGGCCCCCAGGACTaGGCCAATGAGGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: RLYMPPKARFIATILYLNQGPQD*ANEGPV
Trigger: AACTGGTCCCTCATTGGCTCAGTCCTGGGGGCCCTG...ATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTCAGGGCCCCCAGGACTaGGCCAATGAGGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTAQGPQD*ANEGPV
Trigger: AACTGGTCCCTCATTGGCTCAGTCCTGGGGGCCCTG...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCATCTCTGCTCCGTGTCTaGCAGTGCCAAGATCATGCT +
Preference number: 4 (lower is better)
Translates to: CLQSEACLLVSHTDTAPSSLLRV*QCQDHA
Trigger: AGCATGATCTTGGCACTGTCAGACACGGAGCAGAGA...TGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATCTCTGCTCCGTGTCTaGCAGTGCCAAGATCATGCT +
Preference number: 4 (lower is better)
Translates to: STKRSMPAGEPHRYCSFRSLLRV*QCQDHA
Trigger: AGCATGATCTTGGCACTGTCAGACACGGAGCAGAGA...TCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACAGGCACACCCACGATGTaGTGCATGGCAAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTGTPTM*CMANPG
Trigger: CCCTGGGTTTGCCATGCAGCACATCGTGGGTGTGCC...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS-3UTR GCA 90 bp CCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCTCCTCTCAGCCCTTGTaGGCTCCTTCTCATGACTTT +
Preference number: 4 (lower is better)
Translates to: PAGEPHRYCSFRLRLYMPSSQPL*APSHDF
Trigger: AAAGTCATGAGAAGGAGCGCACAAGGGCTGAGAGGA...GGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATGTGACCCAGAGTCCTaGCCTGGCCCAGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTCDPES*PGPAAC
Trigger: ACATGCTGCTGGGCCAGGGCAGGACTCTGGGTCACA...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTTGTGACCCAGAGTCCTaGCCTGGCCCAGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: IEVVHAPKGSLHCYDSLLCDPES*PGPAAC
Trigger: ACATGCTGCTGGGCCAGGGCAGGACTCTGGGTCACA...AAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCACAGGCCTGGGTGTGCTaGAGACTTTACAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: CLQSEACLLVSHTDTAPSQAWVC*RLYKLN
Trigger: GTTCAGCTTGTAAAGTCTGCAGCACACCCAGGCCTG...TGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp ACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGCAGGCCTGGGTGTGCTaGAGACTTTACAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: TKRSMPAGEPHRYCSFRLQAWVC*RLYKLN
Trigger: GTTCAGCTTGTAAAGTCTGCAGCACACCCAGGCCTG...CAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGCTACAAAGCGAAGCATaGCTGCTGGTGAGCCACACA +
Preference number: 4 (lower is better)
Translates to: CSFRLRLYMPPKARFIATLQSEA*LLVSHT
Trigger: TGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAG...CGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGTCTGTCACCTTTCCCTaGGCCTCTCGAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: SLLKSTFTAIASDPLEEGSVTFP*ASRTSL
Trigger: CAACGAGGTTCGAGAGGCCCAGGGAAAGGTGACAGA...CCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCACACGGTTCACATAGGTaGAGCCAGCCACACCAATCA +
Preference number: 4 (lower is better)
Translates to: CLQSEACLLVSHTDTAPSHGSHR*SQPHQS
Trigger: TGATTGGTGTGGCTGGCTCCACCTATGTGAACCGTG...TGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGTCTCGAATGGCCTCTTaGAGACTCACAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SLLKSTFTAIASDPLEEGSRMAS*RLTGPF
Trigger: GAAGGGGCCTGTGAGTCTCCAAGAGGCCATTCGAGA...CCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGACGCCTGTTCTCGAATaGCCTCTTGGAGACTCACAG +
Preference number: 4 (lower is better)
Translates to: CSFRLRLYMPPKARFIATTPVLE*PLGDSQ
Trigger: CTGTGAGTCTCCAAGAGGCCATTCGAGAACAGGCGT...CGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp AATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTTCCACCATGAGATTGTaGAGGTCCCTCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: NEPCLQSEACLLVSHTDTSTMRL*RSLCWR
Trigger: CCGCCAGCAGAGGGACCTCCACAATCTCATGGTGGA...AGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp GAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAAGTGCGCTCCTTCTCATaGCTTTCCCGCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EVVHAPKGSLHCYDSLLKVRSFS*LSRTAA
Trigger: TGCAGCTGTGCGGGAAAGTCATGAGAAGGAGCGCAC...TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACACCCTCAGGTCCACCATaGGATTGTGGAGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTPSGPP*DCGGPS
Trigger: AGAGGGACCTCCACAATCTCATGGTGGACCTGAGGG...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGGGGGTTAGCTGGCTTTaGATAGCATGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: CSFRLRLYMPPKARFIATGVSWL*IACRAQ
Trigger: CTGTGCTCTACATGCTATTCAAAGCCAGCTAACCCC...CGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCAAGCATGCCTGCTGGTaGGCCACACAGATACTGCTC +
Preference number: 4 (lower is better)
Translates to: FRLRLYMPPKARFIATILKHACW*ATQILL
Trigger: GAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTT...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAACACCCACGATGTGCTaGATGGCAAACCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTTPTMC*MANPGL
Trigger: CAGCCCTGGGTTTGCCATGCAGCACATCGTGGGTGT...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS-3UTR GCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACCACGCAGATAGGCTGTaGGAAGCCTCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYHADRL*EASSPP
Trigger: AGGAGGAGAAGAGGCTTCGCACAGCCTATCTGCGTG...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTCGCTCAGAGTCTTCTaGACGCAGATAGGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYSLRVF*TQIGCA
Trigger: CGCACAGCCTATCTGCGTGCAGAAGACTCTGAGCGA...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCAAGATCATGCTCCCCTaGTCCAGCAAGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FRLRLYMPPKARFIATILKIMLP*SSKKLG
Trigger: GCCCAGCTTCTTGCTGGAGCAGGGGAGCATGATCTT...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGACAGTGCCAAGATCATaGTCCCCTGCTCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SLLKSTFTAIASDPLEEGTVPRS*SPAPAR
Trigger: TCTTGCTGGAGCAGGGGAGCATGATCTTGGCACTGT...CCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGACACATTCACAGCTATTaGCTCAGACCCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: STKRSMPAGEPHRYCSFRHIHSY*LRPSGG
Trigger: TCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTG...TCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp ACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGCACATTCACAGCTATTaGCTCAGACCCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TKRSMPAGEPHRYCSFRLHIHSY*LRPSGG
Trigger: TCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTG...CAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp CCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCGAGCCACACAGATACTaGTCCTTCAGATTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PAGEPHRYCSFRLRLYMPEPHRY*SFRLRL
Trigger: CAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTC...GGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp ATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACTAGCTCCTCGTACCTaGCGTGGCCCGACCAATCGT +
Preference number: 4 (lower is better)
Translates to: MPPKARFIATILYLNPHSLAPRT*RGPTNR
Trigger: ACGATTGGTCGGGCCACGCCAGGTACGAGGAGCTAG...TGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS-3UTR CCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACGTTCCGATTCTACCCTaGCAGGACAACCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYVPILP*QDNPSS
Trigger: GGAGCTAGGGTTGTCCTGCCAGGGTAGAATCGGAAC...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395694.7
ENST00000442740.1
CDS-3UTR CCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTCTGTCACCTTTCCCTaGGCCTCTCGAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYSVTFP*ASRTSL
Trigger: CAACGAGGTTCGAGAGGCCCAGGGAAAGGTGACAGA...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCATCACCTCCTTCAGCTTaGCCTGGTGAACTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: CLQSEACLLVSHTDTAPSSPPSA*PGELPS
Trigger: ACTTGGAAGTTCACCAGGCCAAGCTGAAGGAGGTGA...TGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCTCACCTCCTTCAGCTTaGCCTGGTGAACTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: HRYCSFRLRLYMPPKARFSPPSA*PGELPS
Trigger: ACTTGGAAGTTCACCAGGCCAAGCTGAAGGAGGTGA...GAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAAACTGACTGTCCTCCCTaGAGACACGGTCCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: EVVHAPKGSLHCYDSLLKTDCPP*RHGPSG
Trigger: ACCGCTTGGACCGTGTCTCCAGGGAGGACAGTCAGT...TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTCTCGAATGGCCTCTTaGAGACTCACAGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: FRLRLYMPPKARFIATILSRMAS*RLTGPF
Trigger: GAAGGGGCCTGTGAGTCTCCAAGAGGCCATTCGAGA...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGACGCCTGTTCTCGAATaGCCTCTTGGAGACTCACAG +
Preference number: 4 (lower is better)
Translates to: SLLKSTFTAIASDPLEEGTPVLE*PLGDSQ
Trigger: CTGTGAGTCTCCAAGAGGCCATTCGAGAACAGGCGT...CCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTTGGTTCCACCAGGCCTaGGTGTGCTGCAGACTTTAC +
Preference number: 4 (lower is better)
Translates to: LQIEVVHAPKGSLHCYDSWFHQA*VCCRLY
Trigger: GTAAAGTCTGCAGCACACCCAGGCCTGGTGGAACCA...AGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGTGCGCCCCATCATCCTaGGATCTGCAGTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YDSLLKSTFTAIASDPLECAPSS*DLQCSS
Trigger: GGAAGAGCACTGCAGATCTCAGGATGATGGGGCGCA...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS-3UTR TCA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCAGAGAGTCCTGGTCATaGAGAGGTCCCTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: FRLRLYMPPKARFIATILRESWS*RGPFQG
Trigger: TCCTTGGAAGGGACCTCTTCATGACCAGGACTCTCT...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS-3UTR TCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCCAGTTCCAAGTACTaGCTGTCCTCCCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTASSKY*LSSLET
Trigger: TGTCTCCAGGGAGGACAGTCAGTACTTGGAACTGGC...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGCCAGGACTGAGCCAATaGGGGACCAGTTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: YDSLLKSTFTAIASDPLEPGLSQ*GTSSWS
Trigger: GGACCAAGAACTGGTCCCTCATTGGCTCAGTCCTGG...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGCCCTCAGGTCCACCATaGGATTGTGGAGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: YDSLLKSTFTAIASDPLEPSGPP*DCGGPS
Trigger: AGAGGGACCTCCACAATCTCATGGTGGACCTGAGGG...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCGCAGACTTTACAAGCTaGACCACCCCAGCCATTTGG +
Preference number: 4 (lower is better)
Translates to: FRLRLYMPPKARFIATILADFTS*TTPAIW
Trigger: CCAAATGGCTGGGGTGGTTCAGCTTGTAAAGTCTGC...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTCTCTGCTCCGTGTCTaGCAGTGCCAAGATCATGCT +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYSLLRV*QCQDHA
Trigger: AGCATGATCTTGGCACTGTCAGACACGGAGCAGAGA...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGAGATGGTGTTCCTGTTaGCTTGGGCTTCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: YLNPHSQLLPQTLWRRGQRWCSC*LGLLVS
Trigger: AGAGACTAGAAGCCCAAGTCAACAGGAACACCATCT...CTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAGCATGCCTGCTGGTaGGCCACACAGATACTGCTC +
Preference number: 4 (lower is better)
Translates to: IEVVHAPKGSLHCYDSLLKHACW*ATQILL
Trigger: GAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTT...AAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACAAAGCATGCCTGCTGGTaGGCCACACAGATACTGCTC +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTKHACW*ATQILL
Trigger: GAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTT...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp AGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATGCCCTCGAGCCACCATaGACACTTTCTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLYMPPKARFIATILYLNALEPP*TLSQPA
Trigger: TGCAGGCTGAGAAAGTGTTCATGGTGGCTCGAGGGC...ATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442740.1
CDS-3UTR GCA 90 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAGCCTCTTCTCCTCCTaGAGCATCCTGTGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: IEVVHAPKGSLHCYDSLLSLFSS*SILCSR
Trigger: TCTCGAGCACAGGATGCTGCAGGAGGAGAAGAGGCT...AAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACACACGCAGATAGGCTGTaGGAAGCCTCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTHADRL*EASSPP
Trigger: AGGAGGAGAAGAGGCTTCGCACAGCCTATCTGCGTG...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACCAGGCCTGGGTGTGCTaGAGACTTTACAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYQAWVC*RLYKLN
Trigger: GTTCAGCTTGTAAAGTCTGCAGCACACCCAGGCCTG...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACACACCAGGCCTGGGTGTaGTGCAGACTTTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTHQAWV*CRLYKL
Trigger: CAGCTTGTAAAGTCTGCAGCACACCCAGGCCTGGTG...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTCACCAGGCCTGGGTGTaGTGCAGACTTTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: IEVVHAPKGSLHCYDSLLHQAWV*CRLYKL
Trigger: CAGCTTGTAAAGTCTGCAGCACACCCAGGCCTGGTG...AAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAGATCATGCTCCCCTaGTCCAGCAAGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: IEVVHAPKGSLHCYDSLLKIMLP*SSKKLG
Trigger: GCCCAGCTTCTTGCTGGAGCAGGGGAGCATGATCTT...AAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACAAAGATCATGCTCCCCTaGTCCAGCAAGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTKIMLP*SSKKLG
Trigger: GCCCAGCTTCTTGCTGGAGCAGGGGAGCATGATCTT...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACATGGGCTTCTAGTCTCTaGTCCGTGTCTGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTWASSL*SVSDSA
Trigger: GGCACTGTCAGACACGGAGCAGAGACTAGAAGCCCA...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGAGCCACACAGATACTaGTCCTTCAGATTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CLQSEACLLVSHTDTAPSEPHRY*SFRLRL
Trigger: CAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTC...TGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAACCGGAGGCCATCTaGACCTTCTCTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: IEVVHAPKGSLHCYDSLLKPEAI*TFSPHP
Trigger: TGGGTGTGGAGAGAAGGTGCAGATGGCCTCCGGTTT...AAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442740.1
CDS-3UTR CCA 90 bp AATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTACCAAGTCTTGGCTGTaGAGGTCGCTCGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: NEPCLQSEACLLVSHTDTTKSWL*RSLVAE
Trigger: TTCAGCAACGAGCGACCTCCACAGCCAAGACTTGGT...AGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTACCAAGTCTTGGCTGTaGAGGTCGCTCGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LQIEVVHAPKGSLHCYDSTKSWL*RSLVAE
Trigger: TTCAGCAACGAGCGACCTCCACAGCCAAGACTTGGT...AGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATGTCCCACCAAGTCTTaGCTGTGGAGGTCGCTCGTT +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTCPTKS*LWRSLV
Trigger: AACGAGCGACCTCCACAGCCAAGACTTGGTGGGACA...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACATCTGTCACCTTTCCCTaGGCCTCTCGAACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTSVTFP*ASRTSL
Trigger: CAACGAGGTTCGAGAGGCCCAGGGAAAGGTGACAGA...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACCACGGTTCACATAGGTaGAGCCAGCCACACCAATCA +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYHGSHR*SQPHQS
Trigger: TGATTGGTGTGGCTGGCTCCACCTATGTGAACCGTG...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGTCCACCATGAGATTGTaGAGGTCCCTCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: YDSLLKSTFTAIASDPLESTMRL*RSLCWR
Trigger: CCGCCAGCAGAGGGACCTCCACAATCTCATGGTGGA...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACACTACATCTCTGTCTCTaGTCGGGGGACTACCTGCCT +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTLHLCL*SGDYLP
Trigger: AGGCAGGTAGTCCCCCGACCAGAGACAGAGATGTAG...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGACCACCCCAGCCATTTaGCTACAAGTCTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: YLNPHSQLLPQTLWRRGQTTPAI*LQVFSR
Trigger: CCTAGAAAAGACTTGTAGCCAAATGGCTGGGGTGGT...CTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACATGGTTCCACCAGGCCTaGGTGTGCTGCAGACTTTAC +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTWFHQA*VCCRLY
Trigger: GTAAAGTCTGCAGCACACCCAGGCCTGGTGGAACCA...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATGGTTCCACCAGGCCTaGGTGTGCTGCAGACTTTAC +
Preference number: 4 (lower is better)
Translates to: EVVHAPKGSLHCYDSLLKWFHQA*VCCRLY
Trigger: GTAAAGTCTGCAGCACACCCAGGCCTGGTGGAACCA...TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATGGTTCCACCAGGCCTaGGTGTGCTGCAGACTTTAC +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTWFHQA*VCCRLY
Trigger: GTAAAGTCTGCAGCACACCCAGGCCTGGTGGAACCA...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTAGAGCACAGGCAGTGTaGCCACAAATGTCACACAGG +
Preference number: 4 (lower is better)
Translates to: LQIEVVHAPKGSLHCYDSRAQAV*PQMSHR
Trigger: CCTGTGTGACATTTGTGGCCACACTGCCTGTGCTCT...AGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGAGATGGTGTTCCTGTTaGCTTGGGCTTCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SLLKSTFTAIASDPLEEGRWCSC*LGLLVS
Trigger: AGAGACTAGAAGCCCAAGTCAACAGGAACACCATCT...CCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACCAAATGTCACACAGGTaGCCAGGGTGCTATAGATGG +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYQMSHR*PGCYRW
Trigger: CCATCTATAGCACCCTGGTCACCTGTGTGACATTTG...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp AATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGGGGTTAGCTGGCTTTaGATAGCATGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: NEPCLQSEACLLVSHTDTGVSWL*IACRAQ
Trigger: CTGTGCTCTACATGCTATTCAAAGCCAGCTAACCCC...AGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTACTGCTCCTTCAGATTaGGGTTGTACATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LQIEVVHAPKGSLHCYDSTAPSD*GCTCPQ
Trigger: TTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGT...AGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTTCCTGCAGCATCCTGTaGTCGAGAGTAGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTASCSIL*SRVASS
Trigger: GGAACTGGCTACTCTCGAGCACAGGATGCTGCAGGA...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp ATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCATCGCTCAGAGTCTTCTaGACGCAGATAGGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: MPPKARFIATILYLNPHSSLRVF*TQIGCA
Trigger: CGCACAGCCTATCTGCGTGCAGAAGACTCTGAGCGA...TGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTCCTCTCAGCCCTTGTaGGCTCCTTCTCATGACTTT +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYSSQPL*APSHDF
Trigger: AAAGTCATGAGAAGGAGCGCACAAGGGCTGAGAGGA...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGTCTAGGCCATCAAGCTaGTCTCGTAAGCCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: SLLKSTFTAIASDPLEEGSRPSS*SRKPSR
Trigger: TCTAGAAGGCTTACGAGAGCAGCTTGATGGCCTAGA...CCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GTTTTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGGGCATAGCCCCGTCTaGTGGTTCCACCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VLIINVNEPCLQSEACLLGHSPV*WFHQAW
Trigger: CCAGGCCTGGTGGAACCAGCAGACGGGGCTATGCCC...CAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTAAGATCATGCTCCCCTaGTCCAGCAAGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTAKIMLP*SSKKLG
Trigger: GCCCAGCTTCTTGCTGGAGCAGGGGAGCATGATCTT...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp AGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATTGGGCTTCTAGTCTCTaGTCCGTGTCTGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: RLYMPPKARFIATILYLNWASSL*SVSDSA
Trigger: GGCACTGTCAGACACGGAGCAGAGACTAGAAGCCCA...ATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp ATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCATGGGCTTCTAGTCTCTaGTCCGTGTCTGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: MPPKARFIATILYLNPHSWASSL*SVSDSA
Trigger: GGCACTGTCAGACACGGAGCAGAGACTAGAAGCCCA...TGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACACTACAAAGCGAAGCATaGCTGCTGGTGAGCCACACA +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTLQSEA*LLVSHT
Trigger: TGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAG...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACACTACAAAGCGAAGCATaGCTGCTGGTGAGCCACACA +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTLQSEA*LLVSHT
Trigger: TGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAG...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACAACCAAGTCTTGGCTGTaGAGGTCGCTCGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTTKSWL*RSLVAE
Trigger: TTCAGCAACGAGCGACCTCCACAGCCAAGACTTGGT...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp AGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATTGTCCCACCAAGTCTTaGCTGTGGAGGTCGCTCGTT +
Preference number: 4 (lower is better)
Translates to: RLYMPPKARFIATILYLNCPTKS*LWRSLV
Trigger: AACGAGCGACCTCCACAGCCAAGACTTGGTGGGACA...ATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTTGTCCCACCAAGTCTTaGCTGTGGAGGTCGCTCGTT +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTACPTKS*LWRSLV
Trigger: AACGAGCGACCTCCACAGCCAAGACTTGGTGGGACA...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAACGCCTGTTCTCGAATaGCCTCTTGGAGACTCACAG +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTTPVLE*PLGDSQ
Trigger: CTGTGAGTCTCCAAGAGGCCATTCGAGAACAGGCGT...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGCCCAGAGTCCTGCCCTaGCCCAGCAGCATGTACCAG +
Preference number: 4 (lower is better)
Translates to: LIINVNEPCLQSEACLLVPRVLP*PSSMYQ
Trigger: CTGGTACATGCTGCTGGGCCAGGGCAGGACTCTGGG...CACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACAAGAGCACAGGCAGTGTaGCCACAAATGTCACACAGG +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTRAQAV*PQMSHR
Trigger: CCTGTGTGACATTTGTGGCCACACTGCCTGTGCTCT...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCCCTCTCGAACCTCGTTaGGTCCAACAAACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: FRLRLYMPPKARFIATILPLEPR*VQQTLH
Trigger: ATGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGG...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp AGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATGCAGACTTTACAAGCTaGACCACCCCAGCCATTTGG +
Preference number: 4 (lower is better)
Translates to: RLYMPPKARFIATILYLNADFTS*TTPAIW
Trigger: CCAAATGGCTGGGGTGGTTCAGCTTGTAAAGTCTGC...ATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTGCAGACTTTACAAGCTaGACCACCCCAGCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTAADFTS*TTPAIW
Trigger: CCAAATGGCTGGGGTGGTTCAGCTTGTAAAGTCTGC...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp ATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCAGCAGACTTTACAAGCTaGACCACCCCAGCCATTTGG +
Preference number: 4 (lower is better)
Translates to: MPPKARFIATILYLNPHSADFTS*TTPAIW
Trigger: CCAAATGGCTGGGGTGGTTCAGCTTGTAAAGTCTGC...TGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGTCTCTGCTCCGTGTCTaGCAGTGCCAAGATCATGCT +
Preference number: 4 (lower is better)
Translates to: YDSLLKSTFTAIASDPLESLLRV*QCQDHA
Trigger: AGCATGATCTTGGCACTGTCAGACACGGAGCAGAGA...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGGGGTTAGCTGGCTTTaGATAGCATGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTGVSWL*IACRAQ
Trigger: CTGTGCTCTACATGCTATTCAAAGCCAGCTAACCCC...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAACTGCTCCTTCAGATTaGGGTTGTACATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTTAPSD*GCTCPQ
Trigger: TTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGT...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp GAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAAACTGCTCCTTCAGATTaGGGTTGTACATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: EVVHAPKGSLHCYDSLLKTAPSD*GCTCPQ
Trigger: TTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGT...TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTCAGGCCTGGGTGTGCTaGAGACTTTACAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTAQAWVC*RLYKLN
Trigger: GTTCAGCTTGTAAAGTCTGCAGCACACCCAGGCCTG...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTACAGTGCCAAGATCATaGTCCCCTGCTCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTATVPRS*SPAPAR
Trigger: TCTTGCTGGAGCAGGGGAGCATGATCTTGGCACTGT...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp AGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATACAGTGCCAAGATCATaGTCCCCTGCTCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: RLYMPPKARFIATILYLNTVPRS*SPAPAR
Trigger: TCTTGCTGGAGCAGGGGAGCATGATCTTGGCACTGT...ATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACATCACCTCCTTCAGCTTaGCCTGGTGAACTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTSPPSA*PGELPS
Trigger: ACTTGGAAGTTCACCAGGCCAAGCTGAAGGAGGTGA...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGCACGGTTCACATAGGTaGAGCCAGCCACACCAATCA +
Preference number: 4 (lower is better)
Translates to: YDSLLKSTFTAIASDPLEHGSHR*SQPHQS
Trigger: TGATTGGTGTGGCTGGCTCCACCTATGTGAACCGTG...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACACCACCCCAGCCATTTaGCTACAAGTCTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYTTPAI*LQVFSR
Trigger: CCTAGAAAAGACTTGTAGCCAAATGGCTGGGGTGGT...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp AATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTACCACCCCAGCCATTTaGCTACAAGTCTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: NEPCLQSEACLLVSHTDTTTPAI*LQVFSR
Trigger: CCTAGAAAAGACTTGTAGCCAAATGGCTGGGGTGGT...AGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGTGTTCCTGTTGACTTaGGCTTCTAGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTVFLLT*ASSLCS
Trigger: GGAGCAGAGACTAGAAGCCCAAGTCAACAGGAACAC...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACAGTGTTCCTGTTGACTTaGGCTTCTAGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTVFLLT*ASSLCS
Trigger: GGAGCAGAGACTAGAAGCCCAAGTCAACAGGAACAC...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTAGAGCACAGGCAGTGTaGCCACAAATGTCACACAGG +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTARAQAV*PQMSHR
Trigger: CCTGTGTGACATTTGTGGCCACACTGCCTGTGCTCT...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp GCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACACCTCTCGAACCTCGTTaGGTCCAACAAACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: APKGSLHCYDSLLKSTFTPLEPR*VQQTLH
Trigger: ATGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGG...TGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGCCCTCAGGTCCACCATaGGATTGTGGAGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LIINVNEPCLQSEACLLVPSGPP*DCGGPS
Trigger: AGAGGGACCTCCACAATCTCATGGTGGACCTGAGGG...CACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTCTTTCAAGGCAGCTaGAAGGACATCTACATCTCT +
Preference number: 4 (lower is better)
Translates to: LQIEVVHAPKGSLHCYDSLFQGS*KDIYIS
Trigger: AGAGATGTAGATGTCCTTTCAGCTGCCTTGAAAGAG...AGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCCTCTTTCAAGGCAGCTaGAAGGACATCTACATCTCT +
Preference number: 4 (lower is better)
Translates to: FRLRLYMPPKARFIATILLFQGS*KDIYIS
Trigger: AGAGATGTAGATGTCCTTTCAGCTGCCTTGAAAGAG...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAGATGGTGTTCCTGTTaGCTTGGGCTTCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: IEVVHAPKGSLHCYDSLLRWCSC*LGLLVS
Trigger: AGAGACTAGAAGCCCAAGTCAACAGGAACACCATCT...AAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGCAAATGTCACACAGGTaGCCAGGGTGCTATAGATGG +
Preference number: 4 (lower is better)
Translates to: YDSLLKSTFTAIASDPLEQMSHR*PGCYRW
Trigger: CCATCTATAGCACCCTGGTCACCTGTGTGACATTTG...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp AGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATTCCTCTCAGCCCTTGTaGGCTCCTTCTCATGACTTT +
Preference number: 4 (lower is better)
Translates to: RLYMPPKARFIATILYLNSSQPL*APSHDF
Trigger: AAAGTCATGAGAAGGAGCGCACAAGGGCTGAGAGGA...ATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCTAGGCCATCAAGCTaGTCTCGTAAGCCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: EVVHAPKGSLHCYDSLLKSRPSS*SRKPSR
Trigger: TCTAGAAGGCTTACGAGAGCAGCTTGATGGCCTAGA...TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCACCAGGCCTGGGTGTaGTGCAGACTTTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: FIATILYLNPHSQLLPQTHQAWV*CRLYKL
Trigger: CAGCTTGTAAAGTCTGCAGCACACCCAGGCCTGGTG...GGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGCACATTCACAGCTATTaGCTCAGACCCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: YDSLLKSTFTAIASDPLEHIHSY*LRPSGG
Trigger: TCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTG...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACAGAGCCACACAGATACTaGTCCTTCAGATTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTEPHRY*SFRLRL
Trigger: CAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTC...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAAACCACCCCAGCCATTTaGCTACAAGTCTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: EVVHAPKGSLHCYDSLLKTTPAI*LQVFSR
Trigger: CCTAGAAAAGACTTGTAGCCAAATGGCTGGGGTGGT...TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTGTGTTCCTGTTGACTTaGGCTTCTAGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTAVFLLT*ASSLCS
Trigger: GGAGCAGAGACTAGAAGCCCAAGTCAACAGGAACAC...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTCCTCTCGAACCTCGTTaGGTCCAACAAACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTAPLEPR*VQQTLH
Trigger: ATGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGG...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTCTCTTTCAAGGCAGCTaGAAGGACATCTACATCTCT +
Preference number: 4 (lower is better)
Translates to: IEVVHAPKGSLHCYDSLLLFQGS*KDIYIS
Trigger: AGAGATGTAGATGTCCTTTCAGCTGCCTTGAAAGAG...AAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp GTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACACTCTTTCAAGGCAGCTaGAAGGACATCTACATCTCT +
Preference number: 4 (lower is better)
Translates to: VHAPKGSLHCYDSLLKSTLFQGS*KDIYIS
Trigger: AGAGATGTAGATGTCCTTTCAGCTGCCTTGAAAGAG...TGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCACAGTGCCAAGATCATaGTCCCCTGCTCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: FIATILYLNPHSQLLPQTTVPRS*SPAPAR
Trigger: TCTTGCTGGAGCAGGGGAGCATGATCTTGGCACTGT...GGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGAAAAGGCTCGCTTCATTaGTACGATTCTCTACTTAAA +
Preference number: 4 (lower is better)
Translates to: STKRSMPAGEPHRYCSFRKGSLH*YDSLLK
Trigger: TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTT...TCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTGAGCCACACAGATACTaGTCCTTCAGATTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTAEPHRY*SFRLRL
Trigger: CAACCTCAATCTGAAGGAGCAGTATCTGTGTGGCTC...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCGGGGTTAGCTGGCTTTaGATAGCATGTAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: FIATILYLNPHSQLLPQTGVSWL*IACRAQ
Trigger: CTGTGCTCTACATGCTATTCAAAGCCAGCTAACCCC...GGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCACTGCTCCTTCAGATTaGGGTTGTACATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: FIATILYLNPHSQLLPQTTAPSD*GCTCPQ
Trigger: TTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGT...GGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GTTTTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGAGCCTCTTCTCCTCCTaGAGCATCCTGTGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: VLIINVNEPCLQSEACLLSLFSS*SILCSR
Trigger: TCTCGAGCACAGGATGCTGCAGGAGGAGAAGAGGCT...CAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp TTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGAGCACAGGCAGTGTaGCCACAAATGTCACACAGG +
Preference number: 4 (lower is better)
Translates to: LIINVNEPCLQSEACLLVRAQAV*PQMSHR
Trigger: CCTGTGTGACATTTGTGGCCACACTGCCTGTGCTCT...CACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCCTCTCGAACCTCGTTaGGTCCAACAAACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: FIATILYLNPHSQLLPQTPLEPR*VQQTLH
Trigger: ATGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGG...GGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR TCA 90 bp TTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGCAAATGTCACACAGGTaGCCAGGGTGCTATAGATGG +
Preference number: 4 (lower is better)
Translates to: LIINVNEPCLQSEACLLVQMSHR*PGCYRW
Trigger: CCATCTATAGCACCCTGGTCACCTGTGTGACATTTG...CACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGTCCTCTCAGCCCTTGTaGGCTCCTTCTCATGACTTT +
Preference number: 4 (lower is better)
Translates to: LIINVNEPCLQSEACLLVSSQPL*APSHDF
Trigger: AAAGTCATGAGAAGGAGCGCACAAGGGCTGAGAGGA...CACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACAAAGGCTCGCTTCATTaGTACGATTCTCTACTTAAA +
Preference number: 4 (lower is better)
Translates to: RLRLYMPPKARFIATILYKGSLH*YDSLLK
Trigger: TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTT...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GTTTTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGACCAAGTCTTGGCTGTaGAGGTCGCTCGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VLIINVNEPCLQSEACLLTKSWL*RSLVAE
Trigger: TTCAGCAACGAGCGACCTCCACAGCCAAGACTTGGT...CAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GTTTTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGCACGGTTCACATAGGTaGAGCCAGCCACACCAATCA +
Preference number: 4 (lower is better)
Translates to: VLIINVNEPCLQSEACLLHGSHR*SQPHQS
Trigger: TGATTGGTGTGGCTGGCTCCACCTATGTGAACCGTG...CAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp TTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGTCTAGGCCATCAAGCTaGTCTCGTAAGCCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: LIINVNEPCLQSEACLLVSRPSS*SRKPSR
Trigger: TCTAGAAGGCTTACGAGAGCAGCTTGATGGCCTAGA...CACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR GCA 90 bp GAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAAAAAGGCTCGCTTCATTaGTACGATTCTCTACTTAAA +
Preference number: 4 (lower is better)
Translates to: EVVHAPKGSLHCYDSLLKKGSLH*YDSLLK
Trigger: TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTT...TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CCA 90 bp GTTTTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGTTCCTGTTGACTTaGGCTTCTAGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VLIINVNEPCLQSEACLLVFLLT*ASSLCS
Trigger: GGAGCAGAGACTAGAAGCCCAAGTCAACAGGAACAC...CAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS TCA 90 bp TCTCTCCGGGCTGGCTTGGGCCTGGGCTGCAGAGAGTCCTGGTCATaGAGAGGTCCCTTCCAAGGAGGCCCCTCCGAACCAGTACGTGGG +
Preference number: 5 (lower is better)
Translates to: SLRAGLGLGCRESWS*RGPFQGGPSEPVRG
Trigger: CCCACGTACTGGTTCGGAGGGGCCTCCTTGGAAGGGACCTCTTCATGACCAGGACTCTCTGCAGCCCAGGCCCAAGCCAGCCCGGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395694.7
ENST00000438370.1
ENST00000446140.1
CDS TCA 90 bp GAGACACGGTCCAAGCGGTCCCTCACCTCCTTCAGCTTGGCCTGGTaGACTTCCAAGTCCTCCCGAGCCTCTCGGACAAGCCCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: ETRSKRSLTSFSLAW*TSKSSRASRTSPRA
Trigger: GGCTCGAGGGCTTGTCCGAGAGGCTCGGGAGGACTTGGAAGTTCACCAGGCCAAGCTGAAGGAGGTGAGGGACCGCTTGGACCGTGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000446140.1
ENST00000447018.5
CDS TCA 90 bp ACCCGCCCCTGGAGCGCCGCATCCGGTAGCGAGAGTTCAACTTCCTaGCTAGGAGCCAATCAGCGGGGCCGCCTCGCTGTCTACGACAAA +
Preference number: 5 (lower is better)
Translates to: TRPWSAASGSESSTS*LGANQRGRLAVYDK
Trigger: TTTGTCGTAGACAGCGAGGCGGCCCCGCTGATTGGCTCCTAGTCAGGAAGTTGAACTCTCGCTACCGGATGCGGCGCTCCAGGGGCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438370.1
CDS TCA 90 bp AGATCTGGCGTGGCCCGACCAATCGTCTGCCACTCAGTTGACCTCTaGCCTGTTAGTACCCGCCCCTGGAGCGCCGCATCCGGTAGCGAG +
Preference number: 5 (lower is better)
Translates to: RSGVARPIVCHSVDL*PVSTRPWSAASGSE
Trigger: CTCGCTACCGGATGCGGCGCTCCAGGGGCGGGTACTAACAGGTCAGAGGTCAACTGAGTGGCAGACGATTGGTCGGGCCACGCCAGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438370.1
CDS CCA 90 bp GTCATGAAGAGGTCCCTTCCAAGGAGGCCCCTCCGAACCAGTACGTaGGGCACACCCACGATGTGCTGCATGGCAAACCCAGGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: VMKRSLPRRPLRTST*GTPTMCCMANPGLR
Trigger: GCGCAGCCCTGGGTTTGCCATGCAGCACATCGTGGGTGTGCCCCACGTACTGGTTCGGAGGGGCCTCCTTGGAAGGGACCTCTTCATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395694.7
ENST00000438370.1
ENST00000446140.1
CDS CCA 90 bp CCTCCCTGGAGACACGGTCCAAGCGGTCCCTCACCTCCTTCAGCTTaGCCTGGTGAACTTCCAAGTCCTCCCGAGCCTCTCGGACAAGCC +
Preference number: 5 (lower is better)
Translates to: PPWRHGPSGPSPPSA*PGELPSPPEPLGQA
Trigger: GGCTTGTCCGAGAGGCTCGGGAGGACTTGGAAGTTCACCAGGCCAAGCTGAAGGAGGTGAGGGACCGCTTGGACCGTGTCTCCAGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000446140.1
ENST00000447018.5
CDS TCA 90 bp TCATATCTGTCCCACCAAGTCTTGGCTGTGGAGGTCGCTCGTTGCTaGATGCTGTGCCCCAGGGCTCTTCCCAGTGCTGGGAGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: SYLSHQVLAVEVARC*MLCPRALPSAGRRW
Trigger: CCACCGCCTCCCAGCACTGGGAAGAGCCCTGGGGCACAGCATTCAGCAACGAGCGACCTCCACAGCCAAGACTTGGTGGGACAGATATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000446140.1
ENST00000447018.5
CDS TCA 90 bp AGGTGGAGCCAGCCACACCAATCAGGGCCCCCAGGACTGAGCCAATaGGGGACCAGTTCTTGGTCCTCTCAGCCCTTGTGCGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: RWSQPHQSGPPGLSQ*GTSSWSSQPLCAPS
Trigger: AGAAGGAGCGCACAAGGGCTGAGAGGACCAAGAACTGGTCCCTCATTGGCTCAGTCCTGGGGGCCCTGATTGGTGTGGCTGGCTCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS TCA 90 bp AAGGACATCTACATCTCTGTCTCTGGTCGGGGGACTACCTGCCTGTaGCCCAGAGTCCTGCCCTGGCCCAGCAGCATGTACCAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: KDIYISVSGRGTTCL*PRVLPWPSSMYQAP
Trigger: AGGGGCCTGGTACATGCTGCTGGGCCAGGGCAGGACTCTGGGTCACAGGCAGGTAGTCCCCCGACCAGAGACAGAGATGTAGATGTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS TCA 90 bp GTTCACATAGGTGGAGCCAGCCACACCAATCAGGGCCCCCAGGACTaGGCCAATGAGGGACCAGTTCTTGGTCCTCTCAGCCCTTGTGCG +
Preference number: 5 (lower is better)
Translates to: VHIGGASHTNQGPQD*ANEGPVLGPLSPCA
Trigger: CGCACAAGGGCTGAGAGGACCAAGAACTGGTCCCTCATTGGCTCAGTCCTGGGGGCCCTGATTGGTGTGGCTGGCTCCACCTATGTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS GCA 90 bp GACGCCTGTTCTCGAATGGCCTCTTGGAGACTCACAGGCCCCTTCTaGGCCTCCAGGAGTAAAGCCTTCAGCTCCTGTAGTCGCACACGG +
Preference number: 5 (lower is better)
Translates to: DACSRMASWRLTGPF*ASRSKAFSSCSRTR
Trigger: CCGTGTGCGACTACAGGAGCTGAAGGCTTTACTCCTGGAGGCGCAGAAGGGGCCTGTGAGTCTCCAAGAGGCCATTCGAGAACAGGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS CCA 90 bp CATGCTCCCCTGCTCCAGCAAGAAGCTGGGCATAGCCCCGTCTGCTaGTTCCACCAGGCCTGGGTGTGCTGCAGACTTTACAAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: HAPLLQQEAGHSPVC*FHQAWVCCRLYKLN
Trigger: GTTCAGCTTGTAAAGTCTGCAGCACACCCAGGCCTGGTGGAACCAGCAGACGGGGCTATGCCCAGCTTCTTGCTGGAGCAGGGGAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS GCA 90 bp GAAGCTGGGCATAGCCCCGTCTGCTGGTTCCACCAGGCCTGGGTGTaGTGCAGACTTTACAAGCTGAACCACCCCAGCCATTTGGCTACA +
Preference number: 5 (lower is better)
Translates to: EAGHSPVCWFHQAWV*CRLYKLNHPSHLAT
Trigger: TGTAGCCAAATGGCTGGGGTGGTTCAGCTTGTAAAGTCTGCAGCACACCCAGGCCTGGTGGAACCAGCAGACGGGGCTATGCCCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS GCA 90 bp TCTAGTCTCTGCTCCGTGTCTGACAGTGCCAAGATCATGCTCCCCTaGTCCAGCAAGAAGCTGGGCATAGCCCCGTCTGCTGGTTCCACC +
Preference number: 5 (lower is better)
Translates to: SSLCSVSDSAKIMLP*SSKKLGIAPSAGST
Trigger: GGTGGAACCAGCAGACGGGGCTATGCCCAGCTTCTTGCTGGAGCAGGGGAGCATGATCTTGGCACTGTCAGACACGGAGCAGAGACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS CCA 90 bp CAGCAAGAAGCTGGGCATAGCCCCGTCTGCTGGTTCCACCAGGCCTaGGTGTGCTGCAGACTTTACAAGCTGAACCACCCCAGCCATTTG +
Preference number: 5 (lower is better)
Translates to: QQEAGHSPVCWFHQA*VCCRLYKLNHPSHL
Trigger: CAAATGGCTGGGGTGGTTCAGCTTGTAAAGTCTGCAGCACACCCAGGCCTGGTGGAACCAGCAGACGGGGCTATGCCCAGCTTCTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTCTCTCCGGGCTGGCTaGGGCCTGGGCTGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: FRLRLYMPPKARFIATILSLRAG*GLGWRG
Trigger: GCCACGCCAGCCCAGGCCCAAGCCAGCCCGGAGAGA...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412398.6
CDS TCA 90 bp CTTCCAAGTCCTCCCGAGCCTCTCGGACAAGCCCTCGAGCCACCATaGACACTTTCTCAGCCTGCAAAGAGAAAACCGGAGGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: LPSPPEPLGQALEPP*TLSQPAKRKPEAIC
Trigger: GCAGATGGCCTCCGGTTTTCTCTTTGCAGGCTGAGAAAGTGTTCATGGTGGCTCGAGGGCTTGTCCGAGAGGCTCGGGAGGACTTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442740.1
CDS-3UTR CAA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGTGTGGAGGTCGCTCGTaGCTGAATGCTGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGCGGRS*LNAVPQ
Trigger: CTGGGGCACAGCATTCAGCAACGAGCGACCTCCACA...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS TCA 90 bp AGGGACCAGTTCTTGGTCCTCTCAGCCCTTGTGCGCTCCTTCTCATaGCTTTCCCGCACAGCTGCAGAGAAGAGGGAGAACTTCTCTCGC +
Preference number: 5 (lower is better)
Translates to: RDQFLVLSALVRSFS*LSRTAAEKRENFSR
Trigger: GCGAGAGAAGTTCTCCCTCTTCTCTGCAGCTGTGCGGGAAAGTCATGAGAAGGAGCGCACAAGGGCTGAGAGGACCAAGAACTGGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp CCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTGTGGAGGTCGCTCGTaGCTGAATGCTGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: PCLQSEACLLVSHTDTAPCGGRS*LNAVPQ
Trigger: CTGGGGCACAGCATTCAGCAACGAGCGACCTCCACA...AGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGTGGTCCTCTCAGCCCTaGTGCGCTCCTTCTCATGAC +
Preference number: 5 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGWSSQP*CAPSHD
Trigger: GTCATGAGAAGGAGCGCACAAGGGCTGAGAGGACCA...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTCTCTCCGGGCTGGCTaGGGCCTGGGCTGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: FRLRLYMPPKARFIATILSLRAG*GLGCSA
Trigger: AGCACTGCAGCCCAGGCCCAAGCCAGCCCGGAGAGA...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442740.1
ENST00000447018.5
CDS GCA 90 bp CACAGCTGCAGAGAAGAGGGAGAACTTCTCTCGCTCAGAGTCTTCTaGACGCAGATAGGCTGTGCGAAGCCTCTTCTCCTCCTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: HSCREEGELLSLRVF*TQIGCAKPLLLLQH
Trigger: ATGCTGCAGGAGGAGAAGAGGCTTCGCACAGCCTATCTGCGTGCAGAAGACTCTGAGCGAGAGAAGTTCTCCCTCTTCTCTGCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS GCA 90 bp CGTCCAGCTCCCTCTGATCTGGCCTTCACCTGCTCCTCCTTCACATaGCATTTTTCACTCGGTTTCCAGTCCCCACTCATCTGCCTAACC +
Preference number: 5 (lower is better)
Translates to: RPAPSDLAFTCSSFT*HFSLGFQSPLICLT
Trigger: GGTTAGGCAGATGAGTGGGGACTGGAAACCGAGTGAAAAATGGCATGTGAAGGAGGAGCAGGTGAAGGCCAGATCAGAGGGAGCTGGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446140.1
CDS-3UTR CAA 90 bp CACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCCTGTCCCACCAAGTCTaGGCTGTGGAGGTCGCTCGT +
Preference number: 5 (lower is better)
Translates to: HRYCSFRLRLYMPPKARFLSHQV*AVEVAR
Trigger: ACGAGCGACCTCCACAGCCAAGACTTGGTGGGACAG...GAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp CCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTGGTCCTCTCAGCCCTaGTGCGCTCCTTCTCATGAC +
Preference number: 5 (lower is better)
Translates to: PCLQSEACLLVSHTDTAPWSSQP*CAPSHD
Trigger: GTCATGAGAAGGAGCGCACAAGGGCTGAGAGGACCA...AGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGTAGACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGTTCTCGAATGGCCTCTaGGAGACTCACAGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGFSNGL*ETHRPL
Trigger: AAGGGGCCTGTGAGTCTCCAAGAGGCCATTCGAGAA...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp AAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGAGGTCCACCATGAGATaGTGGAGGTCCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KRSMPAGEPHRYCSFRLRRSTMR*WRSLCW
Trigger: CCAGCAGAGGGACCTCCACAATCTCATGGTGGACCT...CCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp TCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGTGTGGAGGTCGCTCGTaGCTGAATGCTGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: SLLKSTFTAIASDPLEEGCGGRS*LNAVPQ
Trigger: CTGGGGCACAGCATTCAGCAACGAGCGACCTCCACA...CCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp AAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGAGGTTCTCGAATGGCCTCTaGGAGACTCACAGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: KRSMPAGEPHRYCSFRLRFSNGL*ETHRPL
Trigger: AAGGGGCCTGTGAGTCTCCAAGAGGCCATTCGAGAA...CCTCAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp CACAGATACTGCTCCTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCAGGTCCACCATGAGATaGTGGAGGTCCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HRYCSFRLRLYMPPKARFRSTMR*WRSLCW
Trigger: CCAGCAGAGGGACCTCCACAATCTCATGGTGGACCT...GAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGAGCAGTATCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp AGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATTCTCTCCGGGCTGGCTaGGGCCTGGGCTGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: RLYMPPKARFIATILYLNSLRAG*GLGCSA
Trigger: AGCACTGCAGCCCAGGCCCAAGCCAGCCCGGAGAGA...ATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp CTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGGGTCCTTCAGATTGAGGTaGTACATGCCCCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: LKSTFTAIASDPLEEGPGSFRLR*YMPPKA
Trigger: AGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGA...CCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS TCA 90 bp CTTTCTCAGCCTCTGTCACCTTTCCCTGGGCCTCTCGAACCTCGTTaGGTCCAACAAACTCTTCATATCTGTCCCACCAAGTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: LSQPLSPFPGPLEPR*VQQTLHICPTKSWL
Trigger: CAGCCAAGACTTGGTGGGACAGATATGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGGCCCAGGGAAAGGTGACAGAGGCTGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000446140.1
ENST00000447018.5
CDS-3UTR CAA 90 bp CTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTTGGTCCTCTCAGCCCTaGTGCGCTCCTTCTCATGAC +
Preference number: 5 (lower is better)
Translates to: LQIEVVHAPKGSLHCYDSWSSQP*CAPSHD
Trigger: GTCATGAGAAGGAGCGCACAAGGGCTGAGAGGACCA...AGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS CCA 90 bp CTGTTTCTGTTCCTCTTCTCTGATTCCGTCCAGCTCCCTCTGATCTaGCCTTCACCTGCTCCTCCTTCACATGCCATTTTTCACTCGGTT +
Preference number: 5 (lower is better)
Translates to: LFLFLFSDSVQLPLI*PSPAPPSHAIFHSV
Trigger: AACCGAGTGAAAAATGGCATGTGAAGGAGGAGCAGGTGAAGGCCAGATCAGAGGGAGCTGGACGGAATCAGAGAAGAGGAACAGAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446140.1
CDS-3UTR CAA 90 bp ATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCATGTGGAGGTCGCTCGTaGCTGAATGCTGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: MPPKARFIATILYLNPHSCGGRS*LNAVPQ
Trigger: CTGGGGCACAGCATTCAGCAACGAGCGACCTCCACA...TGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp TTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCATGAGGGACCAGTTCTaGGTCCTCTCAGCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: FRLRLYMPPKARFIATILMRDQF*VLSALV
Trigger: CACAAGGGCTGAGAGGACCAAGAACTGGTCCCTCAT...GAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp CTTCAGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTATGAGGGACCAGTTCTaGGTCCTCTCAGCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: LQIEVVHAPKGSLHCYDSMRDQF*VLSALV
Trigger: CACAAGGGCTGAGAGGACCAAGAACTGGTCCCTCAT...AGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAGGTCCACCATGAGATaGTGGAGGTCCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: IEVVHAPKGSLHCYDSLLRSTMR*WRSLCW
Trigger: CCAGCAGAGGGACCTCCACAATCTCATGGTGGACCT...AAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp TACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGCCAGTCCTTCAGATTGAGGTaGTACATGCCCCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: YLNPHSQLLPQTLWRRGQSFRLR*YMPPKA
Trigger: AGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGA...CTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp ACAAAGCGAAGCATGCCTGCTGGTGAGCCACACAGATACTGCTCCTTCAGATTGTCCTTCAGATTGAGGTaGTACATGCCCCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: TKRSMPAGEPHRYCSFRLSFRLR*YMPPKA
Trigger: AGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGA...CAATCTGAAGGAGCAGTATCTGTGTGGCTCACCAGCAGGCATGCTTCGCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp TCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGGAGGGGGCCTCTCGAACCTCGTaGAGTCCAACAAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: SLLKSTFTAIASDPLEEGASRTS*SPTNSS
Trigger: TGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGGC...CCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp TACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCCTCTGGAGTGGTCCTCTCAGCCCTaGTGCGCTCCTTCTCATGAC +
Preference number: 5 (lower is better)
Translates to: YDSLLKSTFTAIASDPLEWSSQP*CAPSHD
Trigger: GTCATGAGAAGGAGCGCACAAGGGCTGAGAGGACCA...CTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp ATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTATGAGGGACCAGTTCTaGGTCCTCTCAGCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: IEVVHAPKGSLHCYDSLLMRDQF*VLSALV
Trigger: CACAAGGGCTGAGAGGACCAAGAACTGGTCCCTCAT...AAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp GAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATTCTCGAATGGCCTCTaGGAGACTCACAGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: EVVHAPKGSLHCYDSLLKFSNGL*ETHRPL
Trigger: AAGGGGCCTGTGAGTCTCCAAGAGGCCATTCGAGAA...TTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp AGATTGAGGTTGTACATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACGCCTCTCGAACCTCGTaGAGTCCAACAAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: RLRLYMPPKARFIATILYASRTS*SPTNSS
Trigger: TGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGGC...GTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCATGTACAACCTCAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp CCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTATGAGGGACCAGTTCTaGGTCCTCTCAGCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: PKGSLHCYDSLLKSTFTAMRDQF*VLSALV
Trigger: CACAAGGGCTGAGAGGACCAAGAACTGGTCCCTCAT...AGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS TCA 90 bp AGCTGCTCTCGTAAGCCTTCTAGACATGAATGGACTTGCCTGGAATaGCTAAGCTGCTCTTTCAAGGCAGCTGAAAGGACATCTACATCT +
Preference number: 5 (lower is better)
Translates to: SCSRKPSRHEWTCLE*LSCSFKAAERTSTS
Trigger: AGATGTAGATGTCCTTTCAGCTGCCTTGAAAGAGCAGCTTAGTCATTCCAGGCAAGTCCATTCATGTCTAGAAGGCTTACGAGAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp ATGCCCCCAAAGGCTCGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCAGCCTCTCGAACCTCGTaGAGTCCAACAAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: MPPKARFIATILYLNPHSASRTS*SPTNSS
Trigger: TGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGGC...TGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCGAGCCTTTGGGGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp TTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTATTGCCTCAGACCGCCTCTCGAACCTCGTaGAGTCCAACAAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: FIATILYLNPHSQLLPQTASRTS*SPTNSS
Trigger: TGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGGC...GGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS-3UTR CAA 90 bp TTGATAATTAATGTAAATGAACCTTGTCTACAAAGCGAAGCATGCCTGCTGGTGTCCTTCAGATTGAGGTaGTACATGCCCCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: LIINVNEPCLQSEACLLVSFRLR*YMPPKA
Trigger: AGCCTTTGGGGGCATGTACAACCTCAATCTGAAGGA...CACCAGCAGGCATGCTTCGCTTTGTAGACAAGGTTCATTTACATTAATTATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS GCA 72 bp CAGGTCTTTTCTCTCCGGGCTGGCTTGGGCCTGGGCTaGAGTGCTCTTCCCGCGCACGGCCACAGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: QVFSLRAGLGLG*SALPAHGHRPG
Trigger: ACCAGGCCTGTGGCCGTGCGCGGGAAGAGCACTGCAGCCCAGGCCCAAGCCAGCCCGGAGAGAAAAGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442740.1
ENST00000447018.5
CDS GCA 72 bp GGCAAACCCAGGGCTGCGCCCCATCATCCTGAGATCTaGAGTGCTCTTCCCGCGCACGGCCACAGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: GKPRAAPHHPEI*SALPAHGHRPG
Trigger: ACCAGGCCTGTGGCCGTGCGCGGGAAGAGCACTGCAGATCTCAGGATGATGGGGCGCAGCCCTGGGTTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS CCA 72 bp AATCAGCGGGGCCGCCTCGCTGTCTACGACAAAGGGTaGGGCAGACGCTCCGTTTCCGGTGGCAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: NQRGRLAVYDKG*GRRSVSGGRVW
Trigger: CCAGACCCTGCCACCGGAAACGGAGCGTCTGCCCCACCCTTTGTCGTAGACAGCGAGGCGGCCCCGCTGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438370.1
CDS TCA 72 bp GCTGCATGGCAAACCCAGGGCTGCGCCCCATCATCCTaGGATCTGCAGTGCTCTTCCCGCGCACGGCCACAG +
Preference number: 6 (lower is better)
Translates to: AAWQTQGCAPSS*DLQCSSRARPQ
Trigger: CTGTGGCCGTGCGCGGGAAGAGCACTGCAGATCTCAGGATGATGGGGCGCAGCCCTGGGTTTGCCATGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS TCA 72 bp GCCCAGCAGCATGTACCAGGCCCCTCAGGTCCACCATaGGATTGTGGAGGTCCCTCTGCTGGCGGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: AQQHVPGPSGPP*DCGGPSAGGSS
Trigger: GCTACTCCCGCCAGCAGAGGGACCTCCACAATCTCATGGTGGACCTGAGGGGCCTGGTACATGCTGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS TCA 72 bp GTGGCCCGACCAATCGTCTGCCACTCAGTTGACCTCTaGCCTGTTAGTACCCGCCCCTGGAGCGCCGCATCC +
Preference number: 6 (lower is better)
Translates to: VARPIVCHSVDL*PVSTRPWSAAS
Trigger: GGATGCGGCGCTCCAGGGGCGGGTACTAACAGGTCAGAGGTCAACTGAGTGGCAGACGATTGGTCGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438370.1
CDS GCA 72 bp CTCCGAACCAGTACGTGGGGCACACCCACGATGTGCTaGATGGCAAACCCAGGGCTGCGCCCCATCATCCTG +
Preference number: 6 (lower is better)
Translates to: LRTSTWGTPTMC*MANPGLRPIIL
Trigger: CAGGATGATGGGGCGCAGCCCTGGGTTTGCCATGCAGCACATCGTGGGTGTGCCCCACGTACTGGTTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395694.7
ENST00000438370.1
ENST00000446140.1
CDS TCA 72 bp TCCCACCAAGTCTTGGCTGTGGAGGTCGCTCGTTGCTaGATGCTGTGCCCCAGGGCTCTTCCCAGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: SHQVLAVEVARC*MLCPRALPSAG
Trigger: CCCAGCACTGGGAAGAGCCCTGGGGCACAGCATTCAGCAACGAGCGACCTCCACAGCCAAGACTTGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000446140.1
ENST00000447018.5
CDS CCA 72 bp AGGTCCCTTCCAAGGAGGCCCCTCCGAACCAGTACGTaGGGCACACCCACGATGTGCTGCATGGCAAACCCA +
Preference number: 6 (lower is better)
Translates to: RSLPRRPLRTST*GTPTMCCMANP
Trigger: TGGGTTTGCCATGCAGCACATCGTGGGTGTGCCCCACGTACTGGTTCGGAGGGGCCTCCTTGGAAGGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395694.7
ENST00000438370.1
ENST00000446140.1
CDS CAA 72 bp GCGGGAGTAGCTAGACGCCTGTTCTCGAATGGCCTCTaGGAGACTCACAGGCCCCTTCTGCGCCTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: AGVARRLFSNGL*ETHRPLLRLQE
Trigger: CTCCTGGAGGCGCAGAAGGGGCCTGTGAGTCTCCAAGAGGCCATTCGAGAACAGGCGTCTAGCTACTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS CAA 72 bp GATCTGGCGTGGCCCGACCAATCGTCTGCCACTCAGTaGACCTCTGACCTGTTAGTACCCGCCCCTGGAGCG +
Preference number: 6 (lower is better)
Translates to: DLAWPDQSSATQ*TSDLLVPAPGA
Trigger: CGCTCCAGGGGCGGGTACTAACAGGTCAGAGGTCAACTGAGTGGCAGACGATTGGTCGGGCCACGCCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438370.1
CDS CCA 72 bp CCTTCAGCTCCTGTAGTCGCACACGGTTCACATAGGTaGAGCCAGCCACACCAATCAGGGCCCCCAGGACTG +
Preference number: 6 (lower is better)
Translates to: PSAPVVAHGSHR*SQPHQSGPPGL
Trigger: CAGTCCTGGGGGCCCTGATTGGTGTGGCTGGCTCCACCTATGTGAACCGTGTGCGACTACAGGAGCTGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS GCA 72 bp TGCTCCGTGTCTGACAGTGCCAAGATCATGCTCCCCTaGTCCAGCAAGAAGCTGGGCATAGCCCCGTCTGCT +
Preference number: 6 (lower is better)
Translates to: CSVSDSAKIMLP*SSKKLGIAPSA
Trigger: AGCAGACGGGGCTATGCCCAGCTTCTTGCTGGAGCAGGGGAGCATGATCTTGGCACTGTCAGACACGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS CCA 72 bp CGGTTAAGTACCCCTCCTACGGTTCCGATTCTACCCTaGCAGGACAACCCTAGCTCCTCGTACCTGGCGTGG +
Preference number: 6 (lower is better)
Translates to: RLSTPPTVPILP*QDNPSSSYLAW
Trigger: CCACGCCAGGTACGAGGAGCTAGGGTTGTCCTGCCAGGGTAGAATCGGAACCGTAGGAGGGGTACTTAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395694.7
CDS TCA 72 bp AGCATCCTGTGCTCGAGAGTAGCCAGTTCCAAGTACTaGCTGTCCTCCCTGGAGACACGGTCCAAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: SILCSRVASSKY*LSSLETRSKRS
Trigger: GGACCGCTTGGACCGTGTCTCCAGGGAGGACAGTCAGTACTTGGAACTGGCTACTCTCGAGCACAGGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000446140.1
ENST00000447018.5
CDS TCA 72 bp CCTCCCGAGCCTCTCGGACAAGCCCTCGAGCCACCATaGACACTTTCTCAGCCTGCAAAGAGAAAACCGGAG +
Preference number: 6 (lower is better)
Translates to: PPEPLGQALEPP*TLSQPAKRKPE
Trigger: CTCCGGTTTTCTCTTTGCAGGCTGAGAAAGTGTTCATGGTGGCTCGAGGGCTTGTCCGAGAGGCTCGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442740.1
CDS GCA 72 bp AGAGAAGAGGGAGAACTTCTCTCGCTCAGAGTCTTCTaGACGCAGATAGGCTGTGCGAAGCCTCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: REEGELLSLRVF*TQIGCAKPLLL
Trigger: GAGGAGAAGAGGCTTCGCACAGCCTATCTGCGTGCAGAAGACTCTGAGCGAGAGAAGTTCTCCCTCTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS TCA 72 bp CCTCTGTCACCTTTCCCTGGGCCTCTCGAACCTCGTTaGGTCCAACAAACTCTTCATATCTGTCCCACCAAG +
Preference number: 6 (lower is better)
Translates to: PLSPFPGPLEPR*VQQTLHICPTK
Trigger: CTTGGTGGGACAGATATGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGGCCCAGGGAAAGGTGACAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000446140.1
ENST00000447018.5
CDS TCA 72 bp TCCACCAGGCCTGGGTGTGCTGCAGACTTTACAAGCTaGACCACCCCAGCCATTTGGCTACAAGTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: STRPGCAADFTS*TTPAIWLQVFS
Trigger: AGAAAAGACTTGTAGCCAAATGGCTGGGGTGGTTCAGCTTGTAAAGTCTGCAGCACACCCAGGCCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS TCA 72 bp GCTCTGTCACCTTTCCCTGGGCCTCTCGAACCTCGTTaGGTCCAACAAACTCTTCATATCTGTCCCACCAAG +
Preference number: 6 (lower is better)
Translates to: ALSPFPGPLEPR*VQQTLHICPTK
Trigger: CTTGGTGGGACAGATATGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGGCCCAGGGAAAGGTGACAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442740.1
CDS CCA 72 bp GTCCAACAAACTCTTCATATCTGTCCCACCAAGTCTTaGCTGTGGAGGTCGCTCGTTGCTGAATGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: VQQTLHICPTKS*LWRSLVAECCA
Trigger: GGCACAGCATTCAGCAACGAGCGACCTCCACAGCCAAGACTTGGTGGGACAGATATGAAGAGTTTGTTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000446140.1
ENST00000447018.5
CDS CAA 72 bp GCCTCTGTCACCTTTCCCTGGGCCTCTCGAACCTCGTaGAGTCCAACAAACTCTTCATATCTGTCCCACCAA +
Preference number: 6 (lower is better)
Translates to: ASVTFPWASRTS*SPTNSSYLSHQ
Trigger: TTGGTGGGACAGATATGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGGCCCAGGGAAAGGTGACAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000446140.1
ENST00000447018.5
CDS CAA 90 bp ACTTTCTCAGCCTCTGTCACCTTTCCCTGGGCCTCTCGAACCTCGTaGAGTCCAACAAACTCTTCATATCTGTCCCACCAAGTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: TFSASVTFPWASRTS*SPTNSSYLSHQVLA
Trigger: AGCCAAGACTTGGTGGGACAGATATGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGGCCCAGGGAAAGGTGACAGAGGCTGAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000446140.1
ENST00000447018.5
CDS CAA 90 bp CGCTTCATTGCTACGATTCTCTACTTAAATCCACATTCACAGCTATaGCCTCAGACCCTCTGGAGGAGGGGCCAGGGGTTAGCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: RFIATILYLNPHSQL*PQTLWRRGQGLAGF
Trigger: AAAGCCAGCTAACCCCTGGCCCCTCCTCCAGAGGGTCTGAGGCAATAGCTGTGAATGTGGATTTAAGTAGAGAATCGTAGCAATGAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS CAA 72 bp AGCTCTGTCACCTTTCCCTGGGCCTCTCGAACCTCGTaGAGTCCAACAAACTCTTCATATCTGTCCCACCAA +
Preference number: 6 (lower is better)
Translates to: SSVTFPWASRTS*SPTNSSYLSHQ
Trigger: TTGGTGGGACAGATATGAAGAGTTTGTTGGACTCAACGAGGTTCGAGAGGCCCAGGGAAAGGTGACAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442740.1
CDS TCA 72 bp CGTAAGCCTTCTAGACATGAATGGACTTGCCTGGAATaGCTAAGCTGCTCTTTCAAGGCAGCTGAAAGGACA +
Preference number: 6 (lower is better)
Translates to: RKPSRHEWTCLE*LSCSFKAAERT
Trigger: TGTCCTTTCAGCTGCCTTGAAAGAGCAGCTTAGTCATTCCAGGCAAGTCCATTCATGTCTAGAAGGCTTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5
CDS GCA 72 bp GCCATTTGGCTACAAGTCTTTTCTAGGCCATCAAGCTaGTCTCGTAAGCCTTCTAGACATGAATGGACTTGC +
Preference number: 6 (lower is better)
Translates to: AIWLQVFSRPSS*SRKPSRHEWTC
Trigger: GCAAGTCCATTCATGTCTAGAAGGCTTACGAGAGCAGCTTGATGGCCTAGAAAAGACTTGTAGCCAAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395694.7
ENST00000412398.6
ENST00000442740.1
ENST00000447018.5