RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC50 (Homo sapiens)

Ensembl gene IDs: ENSG00000152492

Ensembl transcript IDs: ENST00000392455.9, ENST00000392456.4, ENST00000460064.1

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGACACATGAAAGTCACCAGCACCACAATTCTCATTTTCCTCAATaGGGTCATGAGCAGGAACAACTTGTGCTGTACGGAGGTGAACTG +
Preference number: 1 (lower is better)
Translates to: KTHESHQHHNSHFPQ*GHEQEQLVLYGGEL
Trigger: CAGTTCACCTCCGTACAGCACAAGTTGTTCCTGCTCATGACCTCATTGAGGAAAATGAGAATTGTGGTGCTGGTGACTTTCATGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CCA 90 bp GGCCTAGTCCAGATGAGTGTATATATTCCCATCAGAACCCACCACTaGTCATCTTTAAGGCATCCACAAAATGTCCCTCACAAATTCACT +
Preference number: 1 (lower is better)
Translates to: GLVQMSVYIPIRTHH*SSLRHPQNVPHKFT
Trigger: AGTGAATTTGTGAGGGACATTTTGTGGATGCCTTAAAGATGACCAGTGGTGGGTTCTGATGGGAATATATACACTCATCTGGACTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CCA 90 bp AGTCAGTGGCAGAAAAGGTCCAAAGCTTCTGATGACAAGGATACTTaGGGATCATCTGTGAATGTTATATCTCAATGGAAAGCTGACTGT +
Preference number: 1 (lower is better)
Translates to: SQWQKRSKASDDKDT*GSSVNVISQWKADC
Trigger: ACAGTCAGCTTTCCATTGAGATATAACATTCACAGATGATCCCCAAGTATCCTTGTCATCAGAAGCTTTGGACCTTTTCTGCCACTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR TCA 90 bp AAAGGTCCAAAGCTTCTGATGACAAGGATACTTGGGGATCATCTGTaGATGTTATATCTCAATGGAAAGCTGACTGTCAGTCACATAAAG +
Preference number: 1 (lower is better)
Translates to: KGPKLLMTRILGDHL*MLYLNGKLTVSHIK
Trigger: CTTTATGTGACTGACAGTCAGCTTTCCATTGAGATATAACATTCACAGATGATCCCCAAGTATCCTTGTCATCAGAAGCTTTGGACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CCA 90 bp GCACTCCTTACACAAATACCGTCTTCTCAAAAGGGAAAAAGCCTTTaGCTGCAAGTTCTATTCTATTATCAGTCCTTCAGAAAGCTGTTT +
Preference number: 1 (lower is better)
Translates to: ALLTQIPSSQKGKSL*LQVLFYYQSFRKLF
Trigger: AAACAGCTTTCTGAAGGACTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGGTATTTGTGTAAGGAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR GCA 90 bp TCCTTACACAAATACCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTaGAAGTTCTATTCTATTATCAGTCCTTCAGAAAGCTGTTTACAC +
Preference number: 1 (lower is better)
Translates to: SLHKYRLLKREKAFG*KFYSIISPSESCLH
Trigger: GTGTAAACAGCTTTCTGAAGGACTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGGTATTTGTGTAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR TCA 90 bp AAGATAAGCAGATATGGCTTTAAGACTCACAGGCACCACCAGAAATaGGAAAATTGGACCATTTTATATAGTCACTTCTCTATGAGCAGT +
Preference number: 1 (lower is better)
Translates to: KISRYGFKTHRHHQK*ENWTILYSHFSMSS
Trigger: ACTGCTCATAGAGAAGTGACTATATAAAATGGTCCAATTTTCTCATTTCTGGTGGTGCCTGTGAGTCTTAAAGCCATATCTGCTTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR TCA 90 bp ATGAATAACAGGGCATTAAGTTACACAATTAATTATGCCCTTATCTaGAATGCTGAAACCTGCACAGTGCTGGTTCTCTATGCTATGAAG +
Preference number: 1 (lower is better)
Translates to: MNNRALSYTINYALI*NAETCTVLVLYAMK
Trigger: CTTCATAGCATAGAGAACCAGCACTGTGCAGGTTTCAGCATTTCAGATAAGGGCATAATTAATTGTGTAACTTAATGCCCTGTTATTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR TCA 90 bp TATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTaGTCTTTTGGGAAGAAAATGTCGCCCAAACCCATCTTTCAATTT +
Preference number: 1 (lower is better)
Translates to: YVLLAVFPYLFLLLT*SFGKKMSPKPIFQF
Trigger: AAATTGAAAGATGGGTTTGGGCGACATTTTCTTCCCAAAAGATCAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR TCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGGCACTCCAGCCTGTGTaGCAGGGCGAGACTCCAACT +
Preference number: 2 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLALQPV*QGETPT
Trigger: AGTTGGAGTCTCGCCCTGTCACACAGGCTGGAGTGC...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR GCA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACATCCCAAGAAGTATATaGAGCATAGAGGTGGCCAAT +
Preference number: 2 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDIPRSI*SIEVAN
Trigger: ATTGGCCACCTCTATGCTGCATATACTTCTTGGGAT...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 90 bp AGTCAACTCTCAGTTACTCAAGAAGTGGTACCTGGTATGAAGGATTaGGCCAAGAAATTCTCTCCTTCTACCAGTCTTTTTGGTCATGCC +
Preference number: 2 (lower is better)
Translates to: SQLSVTQEVVPGMKD*AKKFSPSTSLFGHA
Trigger: GGCATGACCAAAAAGACTGGTAGAAGGAGAGAATTTCTTGGCCAAATCCTTCATACCAGGTACCACTTCTTGAGTAACTGAGAGTTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 90 bp GAAAGACATTGTGCCCCATGCAGCATTAACAGGACAGTCTCCAGTTaGCTTCTACCTGCCCATATTACTTATCATGGGCTAAAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: ERHCAPCSINRTVSS*LLPAHITYHGLKRK
Trigger: TTTTCTTTTTAGCCCATGATAAGTAATATGGGCAGGTAGAAGCAAACTGGAGACTGTCCTGTTAATGCTGCATGGGGCACAATGTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 90 bp TTCTTACCTCTCGCCATGGATAAAAGAGATTCTTCCACCAATAATTaGAAAGACATTGTGCCCCATGCAGCATTAACAGGACAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: FLPLAMDKRDSSTNN*KDIVPHAALTGQSP
Trigger: TGGAGACTGTCCTGTTAATGCTGCATGGGGCACAATGTCTTTCAAATTATTGGTGGAAGAATCTCTTTTATCCATGGCGAGAGGTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR CCA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACACAAGGCCTAAGCTTTaGATATTGAAAGCACTATCT +
Preference number: 2 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDTRPKL*ILKALS
Trigger: AGATAGTGCTTTCAATATCCAAAGCTTAGGCCTTGT...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR CCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGCCTCACAAACAGTGCTaGCATAAAGTGCAGGTCTCA +
Preference number: 2 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLPHKQC*HKVQVS
Trigger: TGAGACCTGCACTTTATGCCAGCACTGTTTGTGAGG...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR GCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGTTTTGGTCATGCCACTaGTTATTCAGAGGTGGACAG +
Preference number: 2 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLFWSCH*LFRGGQ
Trigger: CTGTCCACCTCTGAATAAGCAGTGGCATGACCAAAA...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR CCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTCAGCCACAAGTCAGTaGCAGAAAAGGTCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYSATSQ*QKRSKA
Trigger: AGCTTTGGACCTTTTCTGCCACTGACTTGTGGCTGA...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 90 bp AGCACTCCTTACACAAATACCGTCTTCTCAAAAGGGAAAAAGCCTTaGGCTGCAAGTTCTATTCTATTATCAGTCCTTCAGAAAGCTGTT +
Preference number: 2 (lower is better)
Translates to: STPYTNTVFSKGKKP*AASSILLSVLQKAV
Trigger: AACAGCTTTCTGAAGGACTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGGTATTTGTGTAAGGAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR TCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGAATACTGCTCTGACTTaGAGCAAGAGAAAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLNTALT*SKRKAS
Trigger: TGAGGCTTTTCTCTTGCTTCAAGTCAGAGCAGTATT...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR TCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGGACCCAAATCCACTCTaGGAAACTGTTCTAAATAGC +
Preference number: 2 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLDPNPL*ETVLNS
Trigger: GCTATTTAGAACAGTTTCTCAGAGTGGATTTGGGTC...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR TCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACGGAAGTAACGTACACTaGCATCAGTCAGAGTCAAAC +
Preference number: 2 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYGSNVH*HQSESN
Trigger: GTTTGACTCTGACTGATGTCAGTGTACGTTACTTCC...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 90 bp GTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTaGATCTTTTGGGAAGAAAATGTCGCCCAAACCCATCTTTCAATT +
Preference number: 2 (lower is better)
Translates to: VCSLSCLPLLVLTPY*IFWEENVAQTHLSI
Trigger: AATTGAAAGATGGGTTTGGGCGACATTTTCTTCCCAAAAGATCAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 90 bp GCAGCTACACAAAGACTAAATTTCTTGAAGAGGTGCTTAAAGGTCTaGTACAGAGGAATACAATCCCTTGCACAAAGGAATACAAATGTT +
Preference number: 2 (lower is better)
Translates to: AATQRLNFLKRCLKV*YRGIQSLAQRNTNV
Trigger: AACATTTGTATTCCTTTGTGCAAGGGATTGTATTCCTCTGTACAAGACCTTTAAGCACCTCTTCAAGAAATTTAGTCTTTGTGTAGCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 90 bp CAGCAAGAGCTGAAATTAGAGACCATAGGGATTTCCAAGACCAATTaGACCAGAAATACAAAAATTCTGATGTCAAAAACCCTCTCACAA +
Preference number: 2 (lower is better)
Translates to: QQELKLETIGISKTN*TRNTKILMSKTLSQ
Trigger: TTGTGAGAGGGTTTTTGACATCAGAATTTTTGTATTTCTGGTCAAATTGGTCTTGGAAATCCCTATGGTCTCTAATTTCAGCTCTTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR TCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGACTCCTTTATTAGGGTaGAGATTTTACAGCCAATCA +
Preference number: 2 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLTPLLG*RFYSQS
Trigger: TGATTGGCTGTAAAATCTTCACCCTAATAAAGGAGT...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR GCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGGTTATCAACAAATACTaGTCTGACTTGAAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLVINKY*SDLKQE
Trigger: CTCTTGCTTCAAGTCAGAGCAGTATTTGTTGATAAC...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR CCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGAATGTTAACCACTTGTaGAGTAAACTGAATGCACCA +
Preference number: 2 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLNVNHL*SKLNAP
Trigger: TGGTGCATTCAGTTTACTCCACAAGTGGTTAACATT...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR CCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTCTACCAGTCTTTTTaGTCATGCCACTGCTTATTC +
Preference number: 2 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYFYQSF*SCHCLF
Trigger: GAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAA...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR GCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTTCACCCAGTAATATTTaGTATAGTGAGTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: PRSICSIEVANIQKLHFLSPSNI*YSESIF
Trigger: GAAAATGGACTCACTATAGCAAATATTACTGGGTGA...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
3UTR-3UTR GCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGAGGGAAAATAAATATTaGAGTAAGGTTAGCAGCTAC +
Preference number: 2 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLRENKY*SKVSSY
Trigger: GTAGCTGCTAACCTTACTGCAATATTTATTTTCCCT...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 90 bp ATAAATATTGCAGTAAGGTTAGCAGCTACACAAAGACTAAATTTCTaGAAGAGGTGCTTAAAGGTCTTGTACAGAGGAATACAATCCCTT +
Preference number: 2 (lower is better)
Translates to: INIAVRLAATQRLNF*KRCLKVLYRGIQSL
Trigger: AAGGGATTGTATTCCTCTGTACAAGACCTTTAAGCACCTCTTCAAGAAATTTAGTCTTTGTGTAGCTGCTAACCTTACTGCAATATTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 90 bp AATTATGAGACAAATGATAGCATCACCTCAGGTTTCCTGGGCAACTaGATTTATATGAGCAAACTCTTGTACTTTTTAATTCAGCACCTT +
Preference number: 2 (lower is better)
Translates to: NYETNDSITSGFLGN*IYMSKLLYFLIQHL
Trigger: AAGGTGCTGAATTAAAAAGTACAAGAGTTTGCTCATATAAATCAAGTTGCCCAGGAAACCTGAGGTGATGCTATCATTTGTCTCATAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR GCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATTCACCCAGTAATATTTaGTATAGTGAGTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYSPSNI*YSESIF
Trigger: GAAAATGGACTCACTATAGCAAATATTACTGGGTGA...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
3UTR-3UTR CAA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACAGGCAGGTGGATCACTaGAGGTCAGGGGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDRQVDH*RSGVRD
Trigger: GTCTCGAACCCCTGACCTCAAGTGATCCACCTGCCT...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR GCA 72 bp GGGCACTTCCTAAGGAATCTGAAAGTGCCCAGGCAATaGGTAGTCTCTCTCTCAAGAGATCACGTTTCTAAA +
Preference number: 3 (lower is better)
Translates to: GHFLRNLKVPRQ*VVSLSRDHVSK
Trigger: TTTAGAAACGTGATCTCTTGAGAGAGAGACTACGCATTGCCTGGGCACTTTCAGATTCCTTAGGAAGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CCA 72 bp TTTGGCCAAGAAATTCTCTCCTTCTACCAGTCTTTTTaGTCATGCCACTGCTTATTCAGAGGTGGACAGACA +
Preference number: 3 (lower is better)
Translates to: FGQEILSFYQSF*SCHCLFRGGQT
Trigger: TGTCTGTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAATTTCTTGGCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR TCA 72 bp CCTAAGCTTTGGATATTGAAAGCACTATCTGGAATTTaGCTTAAGGCCAGGACCTTCCATTTTGTCTCCCCT +
Preference number: 3 (lower is better)
Translates to: PKLWILKALSGI*LKARTFHFVSP
Trigger: AGGGGAGACAAAATGGAAGGTCCTGGCCTTAAGTCAAATTCCAGATAGTGCTTTCAATATCCAAAGCTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR CAA 90 bp CAGTGGCAGAAAAGGTCCAAAGCTTCTGATGACAAGGATACTTGGGGATCATCTCAAAGACTAAATTTCTaGAAGAGGTGCTTAAAGGTC +
Preference number: 3 (lower is better)
Translates to: QWQKRSKASDDKDTWGSSQRLNF*KRCLKV
Trigger: GACCTTTAAGCACCTCTTCAAGAAATTTAGTCTTTG...AGATGATCCCCAAGTATCCTTGTCATCAGAAGCTTTGGACCTTTTCTGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR CAA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCTGGTCAGAAATGCACTaGAGGATAAATCCCAGGAAT +
Preference number: 3 (lower is better)
Translates to: LQPERRMASLLMQSSFNSWSEMH*RINPRN
Trigger: ATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCA...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR-3UTR CAA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCTGGTCAGAAATGCACTaGAGGATAAATCCCAGGAAT +
Preference number: 3 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIWSEMH*RINPRN
Trigger: ATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCA...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
3UTR TCA 72 bp ATTATTGAGAGGTTATCAACAAATACTGCTCTGACTTaGAGCAAGAGAAAAGCCTCAGTCTACAGCCAGAGA +
Preference number: 3 (lower is better)
Translates to: IIERLSTNTALT*SKRKASVYSQR
Trigger: TCTCTGGCTGTAGACTGAGGCTTTTCTCTTGCTTCAAGTCAGAGCAGTATTTGTTGATAACCTCTCAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR TCA 72 bp AAGCTTCTGATGACAAGGATACTTGGGGATCATCTGTaGATGTTATATCTCAATGGAAAGCTGACTGTCAGT +
Preference number: 3 (lower is better)
Translates to: KLLMTRILGDHL*MLYLNGKLTVS
Trigger: ACTGACAGTCAGCTTTCCATTGAGATATAACATTCACAGATGATCCCCAAGTATCCTTGTCATCAGAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR TCA 72 bp ACAAATCTTTCTCAAATGAGAGACCCAAATCCACTCTaGGAAACTGTTCTAAATAGCTGCCTGAATATTGCC +
Preference number: 3 (lower is better)
Translates to: TNLSQMRDPNPL*ETVLNSCLNIA
Trigger: GGCAATATTCAGGCAGCTATTTAGAACAGTTTCTCAGAGTGGATTTGGGTCTCTCATTTGAGAAAGATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CCA 72 bp CAGAAAAGGTCCAAAGCTTCTGATGACAAGGATACTTaGGGATCATCTGTGAATGTTATATCTCAATGGAAA +
Preference number: 3 (lower is better)
Translates to: QKRSKASDDKDT*GSSVNVISQWK
Trigger: TTTCCATTGAGATATAACATTCACAGATGATCCCCAAGTATCCTTGTCATCAGAAGCTTTGGACCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR TCA 72 bp AGATATGGCTTTAAGACTCACAGGCACCACCAGAAATaGGAAAATTGGACCATTTTATATAGTCACTTCTCT +
Preference number: 3 (lower is better)
Translates to: RYGFKTHRHHQK*ENWTILYSHFS
Trigger: AGAGAAGTGACTATATAAAATGGTCCAATTTTCTCATTTCTGGTGGTGCCTGTGAGTCTTAAAGCCATATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR GCA 72 bp TTAGCAGCTACACAAAGACTAAATTTCTTGAAGAGGTaGTTAAAGGTCTTGTACAGAGGAATACAATCCCTT +
Preference number: 3 (lower is better)
Translates to: LAATQRLNFLKR*LKVLYRGIQSL
Trigger: AAGGGATTGTATTCCTCTGTACAAGACCTTTAAGCACCTCTTCAAGAAATTTAGTCTTTGTGTAGCTGCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR TCA 72 bp CTAGGACTTAAAATGTTAACCACTTGTGGAGTAAACTaGATGCACCATATTATAGTGGGTATTTCCAATTTG +
Preference number: 3 (lower is better)
Translates to: LGLKMLTTCGVN*MHHIIVGISNL
Trigger: CAAATTGGAAATACCCACTATAATATGGTGCATTCAGTTTACTCCACAAGTGGTTAACATTTTAAGTCCTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTGCGGGCAGGGGCTGGTaGCCAAAGCAGCGGGAGACG +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAAGRGW*PKQRET
Trigger: CGTCTCCCGCTGCTTTGGTCACCAGCCCCTGCCCGC...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp CAGTGGCAGAAAAGGTCCAAAGCTTCTGATGACAAGGATACTTGGGGATCATCTTGGACTGGTCGATGCTaGCTTCAGCCATACCGGGCC +
Preference number: 4 (lower is better)
Translates to: QWQKRSKASDDKDTWGSSWTGRC*LQPYRA
Trigger: GGCCCGGTATGGCTGAAGTCAGCATCGACCAGTCCA...AGATGATCCCCAAGTATCCTTGTCATCAGAAGCTTTGGACCTTTTCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CAGTGGCAGAAAAGGTCCAAAGCTTCTGATGACAAGGATACTTGGGGATCATCTTGGCGGAGGTTGCAGTaGGCCAAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: QWQKRSKASDDKDTWGSSWRRLQ*AKIAPL
Trigger: CAGTGGTGCAATCTTGGCTCACTGCAACCTCCGCCA...AGATGATCCCCAAGTATCCTTGTCATCAGAAGCTTTGGACCTTTTCTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCGGCCAGGGTCCCGGTTaGCCCTTTAACGCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIGQGPG*PFNAGF
Trigger: GAAGCCCGCGTTAAAGGGGCAACCGGGACCCTGGCC...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATGCGGGCAGGGGCTGGTaGCCAAAGCAGCGGGAGACG +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYAGRGW*PKQRET
Trigger: CGTCTCCCGCTGCTTTGGTCACCAGCCCCTGCCCGC...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGAAGATCAGCGCCCGCTaGCGCCTCGCTGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRKISAR*RLAVVS
Trigger: GGAGACAACAGCGAGGCGGCAGCGGGCGCTGATCTT...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS-3UTR TCA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACTCATCCTTCTTCTCCTaGATGCGTCGTCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDSSFFS*MRRLSA
Trigger: GGCAGAGAGACGACGCATTCAGGAGAAGAAGGATGA...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACTCTTGGCTTCATTCCTaGGTCATGGAGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDSWLHS*VMEVEL
Trigger: CAGCTCCACCTCCATGACGCAGGAATGAAGCCAAGA...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CAGTGGCAGAAAAGGTCCAAAGCTTCTGATGACAAGGATACTTGGGGATCATCTAGGTGGTGGTGGCCGTaGTGGCCTTTCATTCTTAGA +
Preference number: 4 (lower is better)
Translates to: QWQKRSKASDDKDTWGSSRWWWP*WPFILR
Trigger: TCTAAGAATGAAAGGCCAGCACGGCCACCACCACCT...AGATGATCCCCAAGTATCCTTGTCATCAGAAGCTTTGGACCTTTTCTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTGTTCCTGCAGGCTGTaGGCCAGGGTGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYCSCRL*ARVWSS
Trigger: GGAGGACCACACCCTGGCTCACAGCCTGCAGGAACA...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATGGCCAGGGTCCCGGTTaGCCCTTTAACGCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYGQGPG*PFNAGF
Trigger: GAAGCCCGCGTTAAAGGGGCAACCGGGACCCTGGCC...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGGCCACCTGGAGATCATaGTGGACCAAACGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRATWRS*WTKRFR
Trigger: GCGGAACCGTTTGGTCCAGCATGATCTCCAGGTGGC...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACCCTTCTTCTCCTGAATaGGTCGTCTCTCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDPSSPE*VVSLPQ
Trigger: TTGAGGCAGAGAGACGACGCATTCAGGAGAAGAAGG...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGCCAGGCAGCTTGGACTaGTCGATGCTGACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRPGSLD*SMLTSA
Trigger: GGCTGAAGTCAGCATCGACCAGTCCAAGCTGCCTGG...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAAGCAATTGCGAGTGGCTaGCGAGCGAAGATCAGCGCC +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHEAIASG*RAKISA
Trigger: GGCGCTGATCTTCGCTCGCCAGCCACTCGCAATTGC...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS-3UTR CCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATTCCGGAGCCCGGAAATaGACCGGGGCCGTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYSGARK*TGAVQY
Trigger: GTACTGGACGGCCCCGGTCCATTTCCGGGCTCCGGA...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS-3UTR TCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATGTTCCTGCAGGCTGTaGGCCAGGGTGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLICSCRL*ARVWSS
Trigger: GGAGGACCACACCCTGGCTCACAGCCTGCAGGAACA...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACCAGGGATCTCTTCGATaGACAATGTTGTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDQGSLR*TMLFWL
Trigger: GAGCCAGAACAACATTGTTCATCGAAGAGATCCCTG...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CAGTGGCAGAAAAGGTCCAAAGCTTCTGATGACAAGGATACTTGGGGATCATCTACAACTTCCTTGCAGTaGAGCCCTGCTTTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: QWQKRSKASDDKDTWGSSTTSLQ*SPAFCE
Trigger: CTCACAAAAAGCAGGGCTTCACTGCAAGGAAGTTGT...AGATGATCCCCAAGTATCCTTGTCATCAGAAGCTTTGGACCTTTTCTGCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGAGCTACTTGGGAGGCTaGGGCAGGGGAATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLSYLGG*GRGIAP
Trigger: TGGAGCAATTCCCCTGCCTCAGCCTCCCAAGTAGCT...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGTGTCATGATAGGTGGTaGTGGCCGTGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQCHDRW*WPCWPF
Trigger: GAAAGGCCAGCACGGCCACCACCACCTATCATGACA...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCTGTCATGATAGGTGGTaGTGGCCGTGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVICHDRW*WPCWPF
Trigger: GAAAGGCCAGCACGGCCACCACCACCTATCATGACA...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCAACCGCAATTGCGAGTaGCTGGCGAGCGAAGATCAG +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVINRNCE*LASEDQ
Trigger: CTGATCTTCGCTCGCCAGCCACTCGCAATTGCGGTT...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392456.4
3UTR CAA 72 bp TGTGCCCCATGCAGCATTAACAGGACAGTCTCCAGTTaGCTTCTACCTGCCCATATTACTTATCATGGGCTA +
Preference number: 4 (lower is better)
Translates to: CAPCSINRTVSS*LLPAHITYHGL
Trigger: TAGCCCATGATAAGTAATATGGGCAGGTAGAAGCAAACTGGAGACTGTCCTGTTAATGCTGCATGGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATTGGACTGGTCGATGCTaGCTTCAGCCATACCGGGCC +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYWTGRC*LQPYRA
Trigger: GGCCCGGTATGGCTGAAGTCAGCATCGACCAGTCCA...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTCTCGGCATACTTCCTTaGCTCCAGGCAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEALGILP*LQAAWT
Trigger: AGTCCAAGCTGCCTGGAGTCAAGGAAGTATGCCGAG...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGTCATCCTTCTTCTCCTaGATGCGTCGTCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRSSFFS*MRRLSA
Trigger: GGCAGAGAGACGACGCATTCAGGAGAAGAAGGATGA...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCGAAACACTTCACCACTaGTCGTGGGAAGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIETLHH*SWEAEV
Trigger: GACCTCTGCTTCCCACGATCAGTGGTGAAGTGTTTC...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGGCATCATACCATTCCTaGTCCCTGTGGGCCATTCGT +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRASYHS*SLWAIR
Trigger: ACGAATGGCCCACAGGGATCAGGAATGGTATGATGC...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATAGCACTCCAGCCTGTGTaGCAGGGCGAGACTCCAACT +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLIALQPV*QGETPT
Trigger: AGTTGGAGTCTCGCCCTGTCACACAGGCTGGAGTGC...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAAGGCAGGTGGATCACTTaGGGTCAGGGGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQGRWIT*GQGFET
Trigger: GGTCTCGAACCCCTGACCTCAAGTGATCCACCTGCC...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGTTCTGGAGCTGGGCCTaGGCTTTCAGATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRFWSWA*AFRSSS
Trigger: AGAGGAAGATCTGAAAGCGCAGGCCCAGCTCCAGAA...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACTTTTGGTCATGCCACTaGTTATTCAGAGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDFWSCH*LFRGGQ
Trigger: CTGTCCACCTCTGAATAAGCAGTGGCATGACCAAAA...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGCAGAACCCAATTCCCTaGCCCTCCTTGACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLQNPIP*PSLTLV
Trigger: AACCAGGGTCAAGGAGGGCCAGGGAATTGGGTTCTG...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCTTCATTCCTGCGTCATaGAGGTGGAGCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIFIPAS*RWSCSS
Trigger: TGAGGAGCAGCTCCACCTCCATGACGCAGGAATGAA...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATCTGTCATGATAGGTaGTGGTGGCCGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLICHDR*WWPCWP
Trigger: AGGCCAGCACGGCCACCACCACCTATCATGACAGAT...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTCCTGTGGGCCATTCGTaGTGGAGTAGATACAGCTTC +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAPVGHS*WSRYSF
Trigger: GAAGCTGTATCTACTCCATCACGAATGGCCCACAGG...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAATCTCCCCAGGAGGGCTaGGAAATGCAAAACCTCTAC +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHESPQEG*EMQNLY
Trigger: GTAGAGGTTTTGCATTTCTCAGCCCTCCTGGGGAGA...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGGATAGGCATGTGGTCTaGGGCAGCCTCTTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRDRHVV*GSLFVF
Trigger: GAAAACAAAGAGGCTGCCTCAGACCACATGCCTATC...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAATTCTGGAGCTGGGCCTaGGCTTTCAGATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHEFWSWA*AFRSSS
Trigger: AGAGGAAGATCTGAAAGCGCAGGCCCAGCTCCAGAA...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCACCAGGTGGCGGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKAPGGGG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTCCGCCACCTGG...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCACTGTTGTCTCCTTTGTaGTCAGTGACGCGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKALLSPL*SVTRRL
Trigger: CAGGCGGCGCGTCACTGAGCACAAAGGAGACAACAG...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS-3UTR GCA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAATGGGGGAGGGGGAGCTaGAGGTCTGTAACCGCAATT +
Preference number: 4 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQWGRGS*RSVTAI
Trigger: AATTGCGGTTACAGACCTGCAGCTCCCCCTCCCCCA...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS-3UTR CCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCACCAGGCAGCTTGGACTaGTCGATGCTGACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKAPGSLD*SMLTSA
Trigger: GGCTGAAGTCAGCATCGACCAGTCCAAGCTGCCTGG...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGTTCAGATCTTCCTCTTaGAGCTGCTTAGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRFRSSS*SCLATW
Trigger: CCAGGTGGCTAAGCAGCTCCAAGAGGAAGATCTGAA...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCTGCTCACCTTGCCCATaGTCCCTCCCATATACAACT +
Preference number: 4 (lower is better)
Translates to: LQPERRMASLLMQSSFNSCSPCP*SLPYTT
Trigger: AGTTGTATATGGGAGGGACCATGGGCAAGGTGAGCA...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAACCTGCGTCATGGAGGTaGAGCTGCTCCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQPASWR*SCSSLS
Trigger: AGAGAGTGAGGAGCAGCTCCACCTCCATGACGCAGG...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCTGGTGGTGGCCGTGCTaGCCTTTCATTCTTAGAATG +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIWWWPC*PFILRM
Trigger: CATTCTAAGAATGAAAGGCCAGCACGGCCACCACCA...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTGGTCGCGTCTTTAGGTaGGGGCCTTGTATCCTAAAG +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAGRVFR*GPCILK
Trigger: CTTTAGGATACAAGGCCCCCACCTAAAGACGCGACC...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS-3UTR TCA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGTCTTTTGTCCAAAGATaGTTTCTCCCGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQSFVQR*FLPLLG
Trigger: GCCAAGGAGCGGGAGAAATCATCTTTGGACAAAAGA...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGGCACTATCTGGAATTTaGCTTAAGGCCAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQALSGI*LKARTF
Trigger: GAAGGTCCTGGCCTTAAGTCAAATTCCAGATAGTGC...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTTGTGCTGTACGGAGGTaGACTGAAAGAGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLCAVRR*TERDCF
Trigger: GAAGCAGTCTCTTTCAGTTCACCTCCGTACAGCACA...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTTCTTCCTCTTGGAGCTaGTTAGCCACCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLSSSWS*LATWRS
Trigger: TGATCTCCAGGTGGCTAAGCAGCTCCAAGAGGAAGA...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTAATGCGTCGTCTCTCTaGCTCAATAGCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLNASSL*LNSQLL
Trigger: GAGAAGCTGGCTATTGAGGCAGAGAGACGACGCATT...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAACCTTCTTCTCCTGAATaGGTCGTCTCTCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHEPSSPE*VVSLPQ
Trigger: TTGAGGCAGAGAGACGACGCATTCAGGAGAAGAAGG...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTTGCATAAGCACGGGTTaGAGGGAACTCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLCISTG*RELWKV
Trigger: CACTTTCCAGAGTTCCCTGCAACCCGTGCTTATGCA...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTTCATGGAGGTGGAGCTaGTCCTCACTCTCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLSWRWS*SSLSEN
Trigger: ATTCTCAGAGAGTGAGGAGCAGCTCCACCTCCATGA...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGAGACATTGTGCCCCATaGAGCATTAACAGGACAGTC +
Preference number: 4 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQRHCAP*SINRTV
Trigger: GACTGTCCTGTTAATGCTGCATGGGGCACAATGTCT...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCAGTCTGTAACCGCAATTaGGAGTGGCTGGCGAGCGAA +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKAVCNRN*EWLASE
Trigger: TTCGCTCGCCAGCCACTCGCAATTGCGGTTACAGAC...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS-3UTR CCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTAGAATGGAGGAGTCCTaGGCCTGTGTCTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEARMEES*ACVSFF
Trigger: GAAAAAGGAGACACAGGCCCAGGACTCCTCCATTCT...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCTGCTTTAGCTGTTTTTaGCTTCCACTCGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LQPERRMASLLMQSSFNSCFSCF*LPLGVL
Trigger: CAAGACCCCGAGTGGAAGCCAAAAACAGCTAAAGCA...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGTGCTTTAGCTGTTTTTaGCTTCCACTCGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRCFSCF*LPLGVL
Trigger: CAAGACCCCGAGTGGAAGCCAAAAACAGCTAAAGCA...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATATCTGTCATGATAGGTaGTGGTGGCCGTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHICHDR*WWPCWP
Trigger: AGGCCAGCACGGCCACCACCACCTATCATGACAGAT...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCCCTCACAAACAGTGCTaGCATAAAGTGCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LQPERRMASLLMQSSFNSPHKQC*HKVQVS
Trigger: TGAGACCTGCACTTTATGCCAGCACTGTTTGTGAGG...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCAGAGACTGCTTCCATTaGCCTAGTCCAGATGAGTGT +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIRDCFH*PSPDEC
Trigger: ACACTCATCTGGACTAGGCCAATGGAAGCAGTCTCT...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACCTGTGGGCCATTCGTaGTGGAGTAGATACAGCTTC +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLIPVGHS*WSRYSF
Trigger: GAAGCTGTATCTACTCCATCACGAATGGCCCACAGG...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATGCATCATACCATTCCTaGTCCCTGTGGGCCATTCGT +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYASYHS*SLWAIR
Trigger: ACGAATGGCCCACAGGGATCAGGAATGGTATGATGC...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACACTTGTGGAGTAAACTaGATGCACCATATTATAGTG +
Preference number: 4 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDTCGVN*MHHIIV
Trigger: CACTATAATATGGTGCATTCAGTTTACTCCACAAGT...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CAGTGGCAGAAAAGGTCCAAAGCTTCTGATGACAAGGATACTTGGGGATCATCTTTCTACAACTCAACATaGTTACACGATTGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: QWQKRSKASDDKDTWGSSFYNST*LHDCVS
Trigger: GCTAACACAATCGTGTAATCATGTTGAGTTGTAGAA...AGATGATCCCCAAGTATCCTTGTCATCAGAAGCTTTGGACCTTTTCTGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTGCATAAGCACGGGTTaGAGGGAACTCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYCISTG*RELWKV
Trigger: CACTTTCCAGAGTTCCCTGCAACCCGTGCTTATGCA...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATAAGGTGGTGGTGGCCGTaGTGGCCTTTCATTCTTAGA +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLIRWWWP*WPFILR
Trigger: TCTAAGAATGAAAGGCCAGCACGGCCACCACCACCT...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACGCTCCTCACAAACAGTaGTGGCATAAAGTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYAPHKQ*WHKVQV
Trigger: GACCTGCACTTTATGCCAGCACTGTTTGTGAGGAGC...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTAAAGTGCCCAGGCAATaGGTAGTCTCTCTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAKVPRQ*VVSLSR
Trigger: TCTTGAGAGAGAGACTACGCATTGCCTGGGCACTTT...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTCCTCACACAGGCAACTaGATTCCATCAAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLPHTGN*IPSRFC
Trigger: ACAGAACCTTGATGGAATGCAGTTGCCTGTGTGAGG...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAAGAGGCCTCTCCTGAGTaGACCGTTTCCTTTCATGCT +
Preference number: 4 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQEASPE*TVSFHA
Trigger: AGCATGAAAGGAAACGGTCCACTCAGGAGAGGCCTC...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTAAATACTTGGCTGGCTaGACATGGTGGCTTAAGCCT +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAKYLAG*TWWLKP
Trigger: AGGCTTAAGCCACCATGTCCAGCCAGCCAAGTATTT...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGGGTGTTAATGAGGCCTaGCCTCCAAAGGACAAAGAT +
Preference number: 4 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLGVNEA*PPKDKD
Trigger: ATCTTTGTCCTTTGGAGGCCAGGCCTCATTAACACC...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACAATAATGAATCATCTTaGTATTCCCCAAAGCGATGC +
Preference number: 4 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDNNESS*YSPKRC
Trigger: GCATCGCTTTGGGGAATACCAAGATGATTCATTATT...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 72 bp CTCGCCATGGATAAAAGAGATTCTTCCACCAATAATTaGAAAGACATTGTGCCCCATGCAGCATTAACAGGA +
Preference number: 4 (lower is better)
Translates to: LAMDKRDSSTNN*KDIVPHAALTG
Trigger: TCCTGTTAATGCTGCATGGGGCACAATGTCTTTCAAATTATTGGTGGAAGAATCTCTTTTATCCATGGCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTACGTTCGATGCCAAATaGTGCTCAATCTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLTFDAK*CSISCS
Trigger: GGAACAAGAGATTGAGCATCATTTGGCATCGAACGT...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTGAGTCTACAAGGTCTTaGGAATCCAGAACCCAATTC +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAESTRS*ESRTQF
Trigger: GAATTGGGTTCTGGATTCTCAAGACCTTGTAGACTC...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATGGAAAGCCTTGCTACTaGGGCAAAAGCAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHGKPCY*GKSRGS
Trigger: ACTTCCTCTGCTTTTGCCTCAGTAGCAAGGCTTTCC...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGAATACTGCTCTGACTTaGAGCAAGAGAAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRNTALT*SKRKAS
Trigger: TGAGGCTTTTCTCTTGCTTCAAGTCAGAGCAGTATT...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCGACCCAAATCCACTCTaGGAAACTGTTCTAAATAGC +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIDPNPL*ETVLNS
Trigger: GCTATTTAGAACAGTTTCTCAGAGTGGATTTGGGTC...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGGGAAGTAACGTACACTaGCATCAGTCAGAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLGSNVH*HQSESN
Trigger: GTTTGACTCTGACTGATGTCAGTGTACGTTACTTCC...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCAAGTGGTACCTGGTATaGAGGATTTGGCCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIKWYLV*RIWPRN
Trigger: ATTTCTTGGCCAAATCCTTCATACCAGGTACCACTT...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACCCGCTGAACGTTCGATaGCAAATGATGCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYPLNVR*QMMLNL
Trigger: GAGATTGAGCATCATTTGGCATCGAACGTTCAGCGG...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAAAATGCGTCGTCTCTCTaGCTCAATAGCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQNASSL*LNSQLL
Trigger: GAGAAGCTGGCTATTGAGGCAGAGAGACGACGCATT...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATTTCTGTGCTCACCTTaGCCATGGTCCCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLIFLCSP*PWSLPY
Trigger: ATATGGGAGGGACCATGGGCAAGGTGAGCACAGAAA...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATTGTCTCCTTTTTCTGTaGTCACCTTGCCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHCLLFL*SPCPWS
Trigger: GGACCATGGGCAAGGTGAGCACAGAAAAAGGAGACA...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTTCTGATTTTGAGAAATaGCGTGTGGAACTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLSDFEK*RVELCW
Trigger: CCAGCAGAGTTCCACACGGCATTTCTCAAAATCAGA...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTAGGAGGGCTGAGAAATaGAAAACCTCTACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLRRAEK*KTSTVH
Trigger: ATGGACTGTAGAGGTTTTGCATTTCTCAGCCCTCCT...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACAGGGAAAATAAATATTaGAGTAAGGTTAGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDRENKY*SKVSSY
Trigger: GTAGCTGCTAACCTTACTGCAATATTTATTTTCCCT...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCCAGTCTTTTTGGTCATaGCACTGCTTATTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LQPERRMASLLMQSSFNSQSFWS*HCLFRG
Trigger: ACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTG...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCGTCTTTCCATCTCTTTaGAGTCTACAAGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LQPERRMASLLMQSSFNSVFPSL*SLQGLE
Trigger: CTCAAGACCTTGTAGACTCCAAAGAGATGGAAAGAC...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCCTTTTTGTGAGGACTTaGGTGAAAGTCGATCTTGGT +
Preference number: 4 (lower is better)
Translates to: LQPERRMASLLMQSSFNSLFVRT*VKVDLG
Trigger: ACCAAGATCGACTTTCACCCAAGTCCTCACAAAAAG...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATTGGTGGTGGCCGTGCTaGCCTTTCATTCTTAGAATG +
Preference number: 4 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHWWWPC*PFILRM
Trigger: CATTCTAAGAATGAAAGGCCAGCACGGCCACCACCA...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp CAGTGGCAGAAAAGGTCCAAAGCTTCTGATGACAAGGATACTTGGGGATCATCTAATGTTATATCTCAATaGAAAGCTGACTGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: QWQKRSKASDDKDTWGSSNVISQ*KADCQS
Trigger: TGACTGACAGTCAGCTTTCCATTGAGATATAACATT...AGATGATCCCCAAGTATCCTTGTCATCAGAAGCTTTGGACCTTTTCTGCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCTCAAGAAGTGGTACCTaGTATGAAGGATTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVISRSGT*YEGFGQ
Trigger: TTGGCCAAATCCTTCATACCAGGTACCACTTCTTGA...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTAGGAGGTTTGCGTTTTaGGAGTGCCTTAACGATGTT +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEARRFAF*ECLNDV
Trigger: AACATCGTTAAGGCACTCCCAAAACGCAAACCTCCT...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATTCTTTTGTCCAAAGATaGTTTCTCCCGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYSFVQR*FLPLLG
Trigger: GCCAAGGAGCGGGAGAAATCATCTTTGGACAAAAGA...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGAGGCACCACCAGAAATaGGAAAATTGGACCATTTTA +
Preference number: 4 (lower is better)
Translates to: LLMVRNALEDKSQECKHRRHHQK*ENWTIL
Trigger: TAAAATGGTCCAATTTTCTCATTTCTGGTGGTGCCT...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCACCTTATCTGAAATGCTaGAACCTGCACAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKAPYLKC*NLHSAG
Trigger: ACCAGCACTGTGCAGGTTTCAGCATTTCAGATAAGG...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATGTACGGAGGTGAACTaGAAGAGACTGCTTCCATTG +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLICTEVN*KRLLPL
Trigger: CAATGGAAGCAGTCTCTTTCAGTTCACCTCCGTACA...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATCCTCAATGAGGTCATaGGCAGGAACAACTTGTGCT +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLISSMRS*AGTTCA
Trigger: AGCACAAGTTGTTCCTGCTCATGACCTCATTGAGGA...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTAGAGAAGGACAAGACTaGTGTTTACCTTGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAREGQD*CLPWSN
Trigger: GTTTGACCAAGGTAAACATCAGTCTTGTCCTTCTCT...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGCTTGGCAGTATTTATTaGGGATTTCAATACACCAGG +
Preference number: 4 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQLGSIY*GFQYTR
Trigger: CCTGGTGTATTGAAATCCTCAATAAATACTGCCAAG...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACCGCTGAACGTTCGATaGCAAATGATGCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLIPLNVR*QMMLNL
Trigger: GAGATTGAGCATCATTTGGCATCGAACGTTCAGCGG...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAATGTAACTCCTTTTCTTaGAAAAGGCGAGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHECNSFS*KRRAMS
Trigger: GGACATAGCTCGCCTTTTGCAAGAAAAGGAGTTACA...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCGACCGTTTCCTTTCATaGTGCTCATTGTTAATATGG +
Preference number: 4 (lower is better)
Translates to: LQPERRMASLLMQSSFNSDRFLS*CSLLIW
Trigger: CCATATTAACAATGAGCAGCATGAAAGGAAACGGTC...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGCATATACAACTTCCTTaGAGTGAAGCCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQHIQLP*SEALLF
Trigger: AAAAAGCAGGGCTTCACTGCAAGGAAGTTGTATATG...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATCCCAAGAAGTATATaGAGCATAGAGGTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLIPRSI*SIEVAN
Trigger: ATTGGCCACCTCTATGCTGCATATACTTCTTGGGAT...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAAAATTTAAGGCAGTACTaGTCCTCACAAACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHENLRQY*SSQTVL
Trigger: CAGCACTGTTTGTGAGGAGCAGTACTGCCTTAAATT...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTGGTTGCAGGGAACTCTaGAAAGTGTTTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAGCREL*KVFLSL
Trigger: AAGAGAAAGAAACACTTTCCAGAGTTCCCTGCAACC...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGTTCCAAGTTCTCCAGTaGATGTTCTGGTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQFQVLQ*MFWFLF
Trigger: AAAGAGAAACCAGAACATCCACTGGAGAACTTGGAA...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTTGCTCATTGTTAATATaGGGATTGTCCCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLCSLLI*GLSLPL
Trigger: CAAAGGGAGGGACAATCCCCATATTAACAATGAGCA...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAATTCTTTCATCACTCTTaGCTTCATTCCTGCGTCATG +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHEFFHHS*LHSCVM
Trigger: CATGACGCAGGAATGAAGCCAAGAGTGATGAAAGAA...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATGCTCTCATGTCCACCTaGGTAGCCAAAAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYALMST*VAKSSS
Trigger: AGAAGAACTTTTGGCTACCCAGGTGGACATGAGAGC...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATGCTCTCATGTCCACCTaGGTAGCCAAAAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHALMST*VAKSSS
Trigger: AGAAGAACTTTTGGCTACCCAGGTGGACATGAGAGC...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCAGCCAGAGAGAAGGATaGCATCATTACTTATGCAAT +
Preference number: 4 (lower is better)
Translates to: LQPERRMASLLMQSSFNSSQREG*HHYLCN
Trigger: ATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCT...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGTCTTACCTCTCGCCATaGATAAAAGAGATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQSYLSP*IKEILP
Trigger: TGGAAGAATCTCTTTTATCCATGGCGAGAGGTAAGA...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATCAGCCACAAGTCAGTaGCAGAAAAGGTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLISATSQ*QKRSKA
Trigger: AGCTTTGGACCTTTTCTGCCACTGACTTGTGGCTGA...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAAGATTGTGTTAGCCTGTaGCATCAAACAGAATCACCA +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHEDCVSL*HQTESP
Trigger: TGGTGATTCTGTTTGATGCCACAGGCTAACACAATC...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTCTGAGAAAGAGCATTTaGCTTGCAGTTTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLLRKSI*LAVYSK
Trigger: CTTGCTGTAAACTGCAAGCCAAATGCTCTTTCTCAG...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 72 bp ATGTCAAGCAGCCTTATGATAAGGCTCCGTCATATATaGTGCTTATTCAACAATACTGGTGTTAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: MSSSLMIRLRHI*CLFNNTGVNEA
Trigger: GGCCTCATTAACACCAGTATTGTTGAATAAGCACAATATATGACGGAGCCTTATCATAAGGCTGCTTGACAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 72 bp TCAGTTACTCAAGAAGTGGTACCTGGTATGAAGGATTaGGCCAAGAAATTCTCTCCTTCTACCAGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SVTQEVVPGMKD*AKKFSPSTSLF
Trigger: AAAAAGACTGGTAGAAGGAGAGAATTTCTTGGCCAAATCCTTCATACCAGGTACCACTTCTTGAGTAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGCAACAAATACTGCTCTaGCTTGAAGCAAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLQQILL*LEAREK
Trigger: CTTTTCTCTTGCTTCAAGTCAGAGCAGTATTTGTTG...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCGAGGATTTAACTGGCTaGATTTCATTTCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: LQPERRMASLLMQSSFNSEDLTG*ISFLSP
Trigger: AGGAGATAGAAATGAAATTCAGCCAGTTAAATCCTC...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGAATTATGCCCTTATCTaGAATGCTGAAACCTGCACA +
Preference number: 4 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLNYALI*NAETCT
Trigger: TGTGCAGGTTTCAGCATTTCAGATAAGGGCATAATT...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTGTAACTCCTTTTCTTaGAAAAGGCGAGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYCNSFS*KRRAMS
Trigger: GGACATAGCTCGCCTTTTGCAAGAAAAGGAGTTACA...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACAGTCATCACATTCAGTaGTCAGAAACACTTCACCAC +
Preference number: 4 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYSHHIQ*SETLHH
Trigger: GTGGTGAAGTGTTTCTGAGCACTGAATGTGATGACT...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATCTGATTTTGAGAAATaGCGTGTGGAACTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLISDFEK*RVELCW
Trigger: CCAGCAGAGTTCCACACGGCATTTCTCAAAATCAGA...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAAAGTGCTGGCATAAAGTaGAGGTCTCATTGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHESAGIK*RSHCKS
Trigger: ACTTTTACAATGAGACCTGCACTTTATGCCAGCACT...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTTGCGTTTTGGGAGTaGCTTAACGATGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYFAFWE*LNDVEH
Trigger: GTGTTCAACATCGTTAAGGCACTCCCAAAACGCAAA...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAAGGTGAAAGTCGATCTTaGTGTCGAGACTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQGESRS*CRDCFS
Trigger: GGAAAAACAGTCTCGACACCAAGATCGACTTTCACC...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGTTCTACCAGTCTTTTTaGTCATGCCACTGCTTATTC +
Preference number: 4 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLFYQSF*SCHCLF
Trigger: GAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAA...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGTTTCAAAATATGTGCTaGGATGGATTCTTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQFQNMC*DGFFLG
Trigger: CCCTAAGAAGAATCCATCCCAGCACATATTTTGAAA...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACAGCTGCCTATTCTTCTaGGGCTTGGTTATAAATCCA +
Preference number: 4 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYSCLFF*GLVINP
Trigger: TGGATTTATAACCAAGCCCCAGAAGAATAGGCAGCT...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATCAGAACCCACCACTaGTCATCTTTAAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYIRTHH*SSLRHP
Trigger: TGGATGCCTTAAAGATGACCAGTGGTGGGTTCTGAT...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 72 bp GCAGTAAGGTTAGCAGCTACACAAAGACTAAATTTCTaGAAGAGGTGCTTAAAGGTCTTGTACAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: AVRLAATQRLNF*KRCLKVLYRGI
Trigger: TATTCCTCTGTACAAGACCTTTAAGCACCTCTTCAAGAAATTTAGTCTTTGTGTAGCTGCTAACCTTACTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 72 bp TCTTCCCTTACTTGTTCTTACTCCTTACTTGATCTTTaGGGAAGAAAATGTCGCCCAAACCCATCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: SSLTCSYSLLDL*GRKCRPNPSFN
Trigger: ATTGAAAGATGGGTTTGGGCGACATTTTCTTCCCAAAAGATCAAGTAAGGAGTAAGAACAAGTAAGGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAATCCCAATTTCGAGTCTaGTGGTTAATCTTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQSQFRV*WLILVS
Trigger: GGAGACTAAGATTAACCATCAGACTCGAAATTGGGA...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTTTCATCACTCTCTTTTaGCTTGGAATTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PRSICSIEVANIQKLHFLFITLF*LGICCF
Trigger: AAAGCAGCAAATTCCAAGTCAAAAGAGAGTGATGAA...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAATCCATTTCTCCAAAATaGCTACATAAAGTAGGGATG +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHESISPK*LHKVGM
Trigger: CATCCCTACTTTATGTAGTCATTTTGGAGAAATGGA...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAAACTCCTTTATTAGGGTaGAGATTTTACAGCCAATCA +
Preference number: 4 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHETPLLG*RFYSQS
Trigger: TGATTGGCTGTAAAATCTTCACCCTAATAAAGGAGT...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTTTTAGCAGTATAGCCTaGAATCCAGTGCAACAAAAA +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAFSSIA*NPVQQK
Trigger: TTTTTGTTGCACTGGATTTCAGGCTATACTGCTAAA...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATTCTCATTTTCCTCAATaGGGTCATGAGCAGGAACAA +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYSHFPQ*GHEQEQ
Trigger: TTGTTCCTGCTCATGACCTCATTGAGGAAAATGAGA...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATTTCCACTCGGGGTCTTaGTTTCTTTTGTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYFHSGS*FLLSKD
Trigger: ATCTTTGGACAAAAGAAAGCAAGACCCCGAGTGGAA...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCATTCCACTCGGGGTCTTaGTTTCTTTTGTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKAFHSGS*FLLSKD
Trigger: ATCTTTGGACAAAAGAAAGCAAGACCCCGAGTGGAA...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGTCTGAATGTCTTCACTaGATAACAGAACCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLSECLH*ITEPLE
Trigger: TTCCAAAGGTTCTGTTATGCAGTGAAGACATTCAGA...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCAGTGCTGGTTCTCTATaGTATGAAGTTAACTCAAAA +
Preference number: 4 (lower is better)
Translates to: HRGGQYSEATFSYTAQVISAGSL*YEVNSK
Trigger: TTTTGAGTTAACTTCATAGCATAGAGAACCAGCACT...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATAAAGAGCATTTGGCTTaGAGTTTACAGCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHKEHLA*SLQQEL
Trigger: CAGCTCTTGCTGTAAACTGCAAGCCAAATGCTCTTT...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCAGGTTGCAGGGAACTCTaGAAAGTGTTTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKAGCREL*KVFLSL
Trigger: AAGAGAAAGAAACACTTTCCAGAGTTCCCTGCAACC...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACAAGGCCTAAGCTTTaGATATTGAAAGCACTATCT +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEATRPKL*ILKALS
Trigger: AGATAGTGCTTTCAATATCCAAAGCTTAGGCCTTGT...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTGCTTTTGTAATTTATTaGTATGCTGCTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAAFVIY*YAAAGC
Trigger: ACAACCAGCAGCAGCATACCAATAAATTACAAAAGC...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 72 bp CAAAGACTAAATTTCTTGAAGAGGTGCTTAAAGGTCTaGTACAGAGGAATACAATCCCTTGCACAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: QRLNFLKRCLKV*YRGIQSLAQRN
Trigger: ATTCCTTTGTGCAAGGGATTGTATTCCTCTGTACAAGACCTTTAAGCACCTCTTCAAGAAATTTAGTCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATCAAATCTTTCTCAAATaGGAGACCCAAATCCACTCT +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYQIFLK*ETQIHS
Trigger: AGAGTGGATTTGGGTCTCTCATTTGAGAAAGATTTG...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTTGGGGATCATCTGTaGATGTTATATCTCAATGGA +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLILGDHL*MLYLNG
Trigger: TCCATTGAGATATAACATTCACAGATGATCCCCAAG...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATAATAGTAACTATCTaGATAAGCACGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYIIVTI*ISTGCR
Trigger: CCTGCAACCCGTGCTTATGCAGATAGTTACTATTAT...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATAATAATAGTAACTATCTaGATAAGCACGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLIIIVTI*ISTGCR
Trigger: CCTGCAACCCGTGCTTATGCAGATAGTTACTATTAT...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTTCACCCAGTAATATTTaGTATAGTGAGTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEASPSNI*YSESIF
Trigger: GAAAATGGACTCACTATAGCAAATATTACTGGGTGA...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATTATTCCCCAAAGCGATaGTTATACAAAGGCAAGACA +
Preference number: 4 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHYSPKR*LYKGKT
Trigger: TGTCTTGCCTTTGTATAAGCATCGCTTTGGGGAATA...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTCGTTTCAACAGAATATaGCACTCTATGTACAATGAA +
Preference number: 4 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEARFNRI*HSMYNE
Trigger: TTCATTGTACATAGAGTGCCATATTCTGTTGAAACG...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACAGAATCACCACTCTaGTGTCTTTCTTATCAAAGC +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYTESPL*CLSYQS
Trigger: GCTTTGATAAGAAAGACACCAGAGTGGTGATTCTGT...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATAAAATATGTGCTGGGATaGATTCTTCTTAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLIKYVLG*ILLRES
Trigger: GCTTTCCCTAAGAAGAATCCATCCCAGCACATATTT...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCATTCATCACTCTCTTTTaGCTTGGAATTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKAFITLF*LGICCF
Trigger: AAAGCAGCAAATTCCAAGTCAAAAGAGAGTGATGAA...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCATCATTCTTAGAATGGTaGGGTTCATCACTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKASFLEW*GSSLSF
Trigger: AAAAGAGAGTGATGAACCTCACCATTCTAAGAATGA...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATCATTCTTAGAATGGTaGGGTTCATCACTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLISFLEW*GSSLSF
Trigger: AAAAGAGAGTGATGAACCTCACCATTCTAAGAATGA...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR TCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACGTCTAACAGTGGTTTaGACGCAAAAGTCAAATATT +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLIRLTVV*TQKSNI
Trigger: AATATTTGACTTTTGCGTTCAAACCACTGTTAGACG...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCAGGAGCAACAATATCCTaGCTCTTTAATATTCTTACC +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKAGATIS*LFNILT
Trigger: GGTAAGAATATTAAAGAGTCAGGATATTGTTGCTCC...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR TCA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATAAATATAGCTCTTTCTaGGAAAGAGCATTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYKYSSF*ERAFGL
Trigger: CAAGCCAAATGCTCTTTCTCAGAAAGAGCTATATTT...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAAGTTATCAACAAATACTaGTCTGACTTGAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQVINKY*SDLKQE
Trigger: CTCTTGCTTCAAGTCAGAGCAGTATTTGTTGATAAC...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATAAATGTTAACCACTTGTaGAGTAAACTGAATGCACCA +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLINVNHL*SKLNAP
Trigger: TGGTGCATTCAGTTTACTCCACAAGTGGTTAACATT...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
3UTR CAA 72 bp ACAAATGATAGCATCACCTCAGGTTTCCTGGGCAACTaGATTTATATGAGCAAACTCTTGTACTTTTTAATT +
Preference number: 4 (lower is better)
Translates to: TNDSITSGFLGN*IYMSKLLYFLI
Trigger: AATTAAAAAGTACAAGAGTTTGCTCATATAAATCAAGTTGCCCAGGAAACCTGAGGTGATGCTATCATTTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAATCACCCAGTAATATTTaGTATAGTGAGTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQSPSNI*YSESIF
Trigger: GAAAATGGACTCACTATAGCAAATATTACTGGGTGA...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR GCA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAAAGGAATACAATCCCTTaGACAAAGGAATACAAATGT +
Preference number: 4 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQRNTIP*TKEYKC
Trigger: ACATTTGTATTCCTTTGTGCAAGGGATTGTATTCCT...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR GCA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCAAATTTCTTGAAGAGGTaGTTAAAGGTCTTGTACAGA +
Preference number: 4 (lower is better)
Translates to: IHSVSPSNICYSESIFKANFLKR*LKVLYR
Trigger: TCTGTACAAGACCTTTAAGCACCTCTTCAAGAAATT...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CCA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATCCATACCTAACAAAATaGCAGTTTACAAAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHPYLTK*QFTKVL
Trigger: TAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGG...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACCATACCTAACAAAATaGCAGTTTACAAAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: RSICSIEVANIQKLHFLIPYLTK*QFTKVL
Trigger: TAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGG...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CCA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATCAAAAACCAAATACTTaGATAGATGACCACTTCATC +
Preference number: 4 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHQKPNT*IDDHFI
Trigger: GATGAAGTGGTCATCTATCCAAGTATTTGGTTTTTG...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS TCA 90 bp GCTCGCAGGCCGGAGAACGGAGCGGGTCGGGCGGGCAGGGGCTGGTaGCCAAAGCAGCGGGAGACGGTCCCCGAGGCACCAAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: ARRPENGAGRAGRGW*PKQRETVPEAPSWR
Trigger: CCGCCAGCTTGGTGCCTCGGGGACCGTCTCCCGCTGCTTTGGTCACCAGCCCCTGCCCGCCCGACCCGCTCCGTTCTCCGGCCTGCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS GCA 90 bp GACTGGTCGATGCTGACTTCAGCCATACCGGGCCAGGGTCCCGGTTaGCCCTTTAACGCGGGCTTCCCGGTCACCGCCGGCGCCGAGCGG +
Preference number: 5 (lower is better)
Translates to: DWSMLTSAIPGQGPG*PFNAGFPVTAGAER
Trigger: CCGCTCGGCGCCGGCGGTGACCGGGAAGCCCGCGTTAAAGGGGCAACCGGGACCCTGGCCCGGTATGGCTGAAGTCAGCATCGACCAGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS GCA 90 bp GAGCGAAGATCAGCGCCCGCTGCCGCCTCGCTGTTGTCTCCTTTGTaGTCAGTGACGCGCCGCCTGAGGCTGGGGCCCCGCTGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: ERRSAPAAASLLSPL*SVTRRLRLGPRCAP
Trigger: GGGAGCACAGCGGGGCCCCAGCCTCAGGCGGCGCGTCACTGAGCACAAAGGAGACAACAGCGAGGCGGCAGCGGGCGCTGATCTTCGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS GCA 90 bp GTAACCGCAATTGCGAGTGGCTGGCGAGCGAAGATCAGCGCCCGCTaGCGCCTCGCTGTTGTCTCCTTTGTGCTCAGTGACGCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: VTAIASGWRAKISAR*RLAVVSFVLSDAPP
Trigger: AGGCGGCGCGTCACTGAGCACAAAGGAGACAACAGCGAGGCGGCAGCGGGCGCTGATCTTCGCTCGCCAGCCACTCGCAATTGCGGTTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS CCA 90 bp ACAGCAAAATCTCGGCATACTTCCTTGACTCCAGGCAGCTTGGACTaGTCGATGCTGACTTCAGCCATACCGGGCCAGGGTCCCGGTTGC +
Preference number: 5 (lower is better)
Translates to: TAKSRHTSLTPGSLD*SMLTSAIPGQGPGC
Trigger: GCAACCGGGACCCTGGCCCGGTATGGCTGAAGTCAGCATCGACCAGTCCAAGCTGCCTGGAGTCAAGGAAGTATGCCGAGATTTTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS TCA 90 bp ACTTCACCACTGATCGTGGGAAGCAGAGGTCTCCGAGGCCTCTCCTaGGTGGACCGTTTCCTTTCATGCTGCTCATTGTTAATATGGGGA +
Preference number: 5 (lower is better)
Translates to: TSPLIVGSRGLRGLS*VDRFLSCCSLLIWG
Trigger: TCCCCATATTAACAATGAGCAGCATGAAAGGAAACGGTCCACTCAGGAGAGGCCTCGGAGACCTCTGCTTCCCACGATCAGTGGTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS TCA 90 bp TGCTCACCTTGCCCATGGTCCCTCCCATATACAACTTCCTTGCAGTaGAGCCCTGCTTTTTGTGAGGACTTGGGTGAAAGTCGATCTTGG +
Preference number: 5 (lower is better)
Translates to: CSPCPWSLPYTTSLQ*SPAFCEDLGESRSW
Trigger: CCAAGATCGACTTTCACCCAAGTCCTCACAAAAAGCAGGGCTTCACTGCAAGGAAGTTGTATATGGGAGGGACCATGGGCAAGGTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACATTCCCTGGCCCTCCTaGACCCTGGTTGGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDIPWPS*TLVGLH
Trigger: ATGGAGACCAACCAGGGTCAAGGAGGGCCAGGGAAT...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS GCA 90 bp TTCTGTGCTCACCTTGCCCATGGTCCCTCCCATATACAACTTCCTTaGAGTGAAGCCCTGCTTTTTGTGAGGACTTGGGTGAAAGTCGAT +
Preference number: 5 (lower is better)
Translates to: FCAHLAHGPSHIQLP*SEALLFVRTWVKVD
Trigger: ATCGACTTTCACCCAAGTCCTCACAAAAAGCAGGGCTTCACTGCAAGGAAGTTGTATATGGGAGGGACCATGGGCAAGGTGAGCACAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS CCA 90 bp CTCTTTGGAGTCTACAAGGTCTTGAGAATCCAGAACCCAATTCCCTaGCCCTCCTTGACCCTGGTTGGTCTCCATCTTCATAATAGTAAC +
Preference number: 5 (lower is better)
Translates to: LFGVYKVLRIQNPIP*PSLTLVGLHLHNSN
Trigger: GTTACTATTATGAAGATGGAGACCAACCAGGGTCAAGGAGGGCCAGGGAATTGGGTTCTGGATTCTCAAGACCTTGTAGACTCCAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTGCTGCCGCCTCGCTGTaGTCTCCTTTGTGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAAAASL*SPLCSV
Trigger: CACTGAGCACAAAGGAGACAACAGCGAGGCGGCAGC...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS TCA 90 bp GGCAATTTCAGCATCATACCATTCCTGATCCCTGTGGGCCATTCGTaGTGGAGTAGATACAGCTTCTTTCATCACTCTTGGCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: GNFSIIPFLIPVGHS*WSRYSFFHHSWLHS
Trigger: GGAATGAAGCCAAGAGTGATGAAAGAAGCTGTATCTACTCCATCACGAATGGCCCACAGGGATCAGGAATGGTATGATGCTGAAATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS TCA 90 bp ATGATAGGTGGTGGTGGCCGTGCTGGCCTTTCATTCTTAGAATGGTaGGGTTCATCACTCTCTTTTGACTTGGAATTTGCTGCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: MIGGGGRAGLSFLEW*GSSLSFDLEFAALA
Trigger: AGCTAAAGCAGCAAATTCCAAGTCAAAAGAGAGTGATGAACCTCACCATTCTAAGAATGAAAGGCCAGCACGGCCACCACCACCTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS CCA 90 bp TGTTCTGGTTTCTCTTTCTTGTGCTTCACAGTCTTTCCATCTCTTTaGAGTCTACAAGGTCTTGAGAATCCAGAACCCAATTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: CSGFSFLCFTVFPSL*SLQGLENPEPNSLA
Trigger: GGCCAGGGAATTGGGTTCTGGATTCTCAAGACCTTGTAGACTCCAAAGAGATGGAAAGACTGTGAAGCACAAGAAAGAGAAACCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAATTGACTCCAGGCAGCTaGGACTGGTCGATGCTGACT +
Preference number: 5 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHELTPGS*DWSMLT
Trigger: AGTCAGCATCGACCAGTCCAAGCTGCCTGGAGTCAA...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAATCTCGGCATACTTCCTaGACTCCAGGCAGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHESRHTS*TPGSLD
Trigger: GTCCAAGCTGCCTGGAGTCAAGGAAGTATGCCGAGA...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATTCGCTGTTGTCTCCTTaGTGCTCAGTGACGCGCCGC +
Preference number: 5 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHSLLSP*CSVTRR
Trigger: GCGGCGCGTCACTGAGCACAAAGGAGACAACAGCGA...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS TCA 90 bp TCTTCTTCTTGCAGTTTTCTGGCAATTTCAGCATCATACCATTCCTaGTCCCTGTGGGCCATTCGTGATGGAGTAGATACAGCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: SSSCSFLAISASYHS*SLWAIRDGVDTASF
Trigger: GAAAGAAGCTGTATCTACTCCATCACGAATGGCCCACAGGGATCAGGAATGGTATGATGCTGAAATTGCCAGAAAACTGCAAGAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS CCA 90 bp CATATACAACTTCCTTGCAGTGAAGCCCTGCTTTTTGTGAGGACTTaGGTGAAAGTCGATCTTGGTGTCGAGACTGTTTTTCCCAATTTC +
Preference number: 5 (lower is better)
Translates to: HIQLPCSEALLFVRT*VKVDLGVETVFPNF
Trigger: GAAATTGGGAAAAACAGTCTCGACACCAAGATCGACTTTCACCCAAGTCCTCACAAAAAGCAGGGCTTCACTGCAAGGAAGTTGTATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATGGATTGTCCCTCCCTTaGCCCGAGCTAGAGGATGAC +
Preference number: 5 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHGLSLP*PELEDD
Trigger: GTCATCCTCTAGCTCGGGCAAAGGGAGGGACAATCC...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTTTTTCTGTGCTCACCTaGCCCATGGTCCCTCCCATA +
Preference number: 5 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAFSVLT*PMVPPI
Trigger: TATGGGAGGGACCATGGGCAAGGTGAGCACAGAAAA...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGTTCATCTTGAGCTACTaGAGCGGCTCTCATGTCCAC +
Preference number: 5 (lower is better)
Translates to: LLMVRNALEDKSQECKHRFILSY*SGSHVH
Trigger: GTGGACATGAGAGCCGCTCAAGTAGCTCAAGATGAA...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGATGAGCAGGAACAACTaGTGCTGTACGGAGGTGAAC +
Preference number: 5 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQMSRNN*CCTEVN
Trigger: GTTCACCTCCGTACAGCACAAGTTGTTCCTGCTCAT...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAATTGACTCCAGGCAGCTaGGACTGGTCGATGCTGACT +
Preference number: 5 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQLTPGS*DWSMLT
Trigger: AGTCAGCATCGACCAGTCCAAGCTGCCTGGAGTCAA...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAATCTCGGCATACTTCCTaGACTCCAGGCAGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQSRHTS*TPGSLD
Trigger: GTCCAAGCTGCCTGGAGTCAAGGAAGTATGCCGAGA...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTTTTCAGATCTTCCTCTaGGAGCTGCTTAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAFQIFL*ELLSHL
Trigger: CAGGTGGCTAAGCAGCTCCAAGAGGAAGATCTGAAA...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTTTGTTAATATGGGGATaGTCCCTCCCTTTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: PRSICSIEVANIQKLHFLLLIWG*SLPLPE
Trigger: CTCGGGCAAAGGGAGGGACAATCCCCATATTAACAA...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCGCTTTTTGTGAGGACTaGGGTGAAAGTCGATCTTGG +
Preference number: 5 (lower is better)
Translates to: LQPERRMASLLMQSSFNSAFCED*GESRSW
Trigger: CCAAGATCGACTTTCACCCAAGTCCTCACAAAAAGC...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp TTCTCTCCTTCTACCAGTCTTTTTGGTCATGCCACTGCTTATTCAGAGGTGGACCCAAGGTCACACATTTaGGAATATGTTGACCTAGAT +
Preference number: 5 (lower is better)
Translates to: FSPSTSLFGHATAYSEVDPRSHI*EYVDLD
Trigger: ATCTAGGTCAACATATTCCAAAATGTGTGACCTTGG...GTCCACCTCTGAATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAGGAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGAGCGATTTCTTCATCTaGAGCTACTTGAGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLSDFFI*SYLSGS
Trigger: AGAGCCGCTCAAGTAGCTCAAGATGAAGAAATCGCT...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTAGCGATTTCTTCATCTaGAGCTACTTGAGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEASDFFI*SYLSGS
Trigger: AGAGCCGCTCAAGTAGCTCAAGATGAAGAAATCGCT...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAAAGTGCCTTAACGATGTaGAACACCTCAACCTCCCAA +
Preference number: 5 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHESALTM*NTSTSQ
Trigger: TTGGGAGGTTGAGGTGTTCAACATCGTTAAGGCACT...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS GCA 90 bp CATGATGCAGGAATTGTTACCTCCATCTTCATAATAGTAACTATCTaGATAAGCACGGGTTGCAGGGAACTCTGGAAAGTGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: HDAGIVTSIFIIVTI*ISTGCRELWKVFLS
Trigger: AGAAAGAAACACTTTCCAGAGTTCCCTGCAACCCGTGCTTATGCAGATAGTTACTATTATGAAGATGGAGGTAACAATTCCTGCATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460064.1
CDS-3UTR CAA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCAATGATGCTCAATCTCTaGTTCCTGCAGGCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: IHSVSPSNICYSESIFKAMMLNL*FLQAVS
Trigger: GCTCACAGCCTGCAGGAACAAGAGATTGAGCATCAT...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATTTCAGATCTTCCTCTaGGAGCTGCTTAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: RSICSIEVANIQKLHFLIFQIFL*ELLSHL
Trigger: CAGGTGGCTAAGCAGCTCCAAGAGGAAGATCTGAAA...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp ATTCATTCTGTATCACCCAGTAATATTTGCTATAGTGAGTCCATTTTCAAGGCATTCATCTTGAGCTACTaGAGCGGCTCTCATGTCCAC +
Preference number: 5 (lower is better)
Translates to: IHSVSPSNICYSESIFKAFILSY*SGSHVH
Trigger: GTGGACATGAGAGCCGCTCAAGTAGCTCAAGATGAA...TGCCTTGAAAATGGACTCACTATAGCAAATATTACTGGGTGATACAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCAGGTGCTTAAAGGTCTaGTACAGAGGAATACAATCC +
Preference number: 5 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIRCLKV*YRGIQS
Trigger: GGATTGTATTCCTCTGTACAAGACCTTTAAGCACCT...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTCCTGGTATGAAGGATTaGGCCAAGAAATTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAPGMKD*AKKFSP
Trigger: AGGAGAGAATTTCTTGGCCAAATCCTTCATACCAGG...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTGAAAGAGCATTTGGCTaGCAGTTTACAGCAAGAGCT +
Preference number: 5 (lower is better)
Translates to: PRSICSIEVANIQKLHFLERAFG*QFTARA
Trigger: AGCTCTTGCTGTAAACTGCAAGCCAAATGCTCTTTC...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGAATTTCACAGTCTTGTaGTTCAAGGTCTTTGTAGCG +
Preference number: 5 (lower is better)
Translates to: LLMVRNALEDKSQECKHRNFTVL*FKVFVA
Trigger: CGCTACAAAGACCTTGAACAACAAGACTGTGAAATT...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACGGAGTCTACAAGGTCTaGAGAATCCAGAACCCAATT +
Preference number: 5 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYGVYKV*RIQNPI
Trigger: AATTGGGTTCTGGATTCTCAAGACCTTGTAGACTCC...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp AGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCATGAACTTTCATGCTGCTCATaGTTAATATGGGGATTGTCC +
Preference number: 5 (lower is better)
Translates to: RWPIFRSYIFLYCPSDHELSCCS*LIWGLS
Trigger: GGACAATCCCCATATTAACAATGAGCAGCATGAAAG...TTCATGATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCTCACTCTCTTTTGACTaGGAATTTGCTGCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: LQPERRMASLLMQSSFNSSLSFD*EFAALA
Trigger: AGCTAAAGCAGCAAATTCCAAGTCAAAAGAGAGTGA...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATAGAGAGGACTCTGATTTaGAGAAATGCCGTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: RSICSIEVANIQKLHFLIERTLI*RNAVWN
Trigger: GTTCCACACGGCATTTCTCAAAATCAGAGTCCTCTC...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATGAGAGGACTCTGATTTaGAGAAATGCCGTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYERTLI*RNAVWN
Trigger: GTTCCACACGGCATTTCTCAAAATCAGAGTCCTCTC...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTTGGTCAGAAATGCACTaGAGGATAAATCCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAWSEMH*RINPRN
Trigger: ATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCA...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp TTACTTATGGTCAGAAATGCACTTGAGGATAAATCCCAGGAATGCAAACACAGGTGCTTTTGTAATTTATaGGTATGCTGCTGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: LLMVRNALEDKSQECKHRCFCNL*VCCCWL
Trigger: CAACCAGCAGCAGCATACCAATAAATTACAAAAGCA...CCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCATAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATAGGACAGTCTCCAGTTaGCTTCTACCTGCCCATATT +
Preference number: 5 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYRTVSS*LLPAHI
Trigger: AATATGGGCAGGTAGAAGCAAACTGGAGACTGTCCT...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp CTACAGCCAGAGAGAAGGATGGCATCATTACTTATGCAATCATCTTTCAATTCCTCTTCCACCAATAATTaGAAAGACATTGTGCCCCAT +
Preference number: 5 (lower is better)
Translates to: LQPERRMASLLMQSSFNSSSTNN*KDIVPH
Trigger: ATGGGGCACAATGTCTTTCAAATTATTGGTGGAAGA...GGAATTGAAAGATGATTGCATAAGTAATGATGCCATCCTTCTCTCTGGCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTCTATTCTTCTGGGGCTaGGTTATAAATCCATGTGGA +
Preference number: 5 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEALFFWG*VINPCG
Trigger: TCCACATGGATTTATAACCAAGCCCCAGAAGAATAG...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTAGACTGATGTTTACCTaGGTCAAACCATCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEARLMFT*VKPSRK
Trigger: TTTCCTGGATGGTTTGACCAAGGTAAACATCAGTCT...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTAATTTCACAGTCTTGTaGTTCAAGGTCTTTGTAGCG +
Preference number: 5 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEANFTVL*FKVFVA
Trigger: CGCTACAAAGACCTTGAACAACAAGACTGTGAAATT...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCAGCAATTTCACAGTCTaGTTGTTCAAGGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: HRGGQYSEATFSYTAQVISNFTV*LFKVFV
Trigger: TACAAAGACCTTGAACAACAAGACTGTGAAATTGCT...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATCTTCTTTCATCACTCTaGGCTTCATTCCTGCGTCAT +
Preference number: 5 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHLLSSL*ASFLRH
Trigger: ATGACGCAGGAATGAAGCCAAGAGTGATGAAAGAAG...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCCAAAAGTTCTTCTTCTaGCAGTTTTCTGGCAATTTC +
Preference number: 5 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIQKFFF*QFSGNF
Trigger: GAAATTGCCAGAAAACTGCAAGAAGAAGAACTTTTG...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp CCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTGTTCATCACTCTCTTTaGACTTGGAATTTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PRSICSIEVANIQKLHFLVHHSL*TWNLLL
Trigger: AAGCAGCAAATTCCAAGTCAAAAGAGAGTGATGAAC...AAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp CCGTCTTCTCAAAAGGGAAAAAGCCTTTGGCTGCAAGTTCTATTCTATTATCAGCGTTGCATCCAAACATaGTTTCACTTTGATCATTCA +
Preference number: 5 (lower is better)
Translates to: PSSQKGKSLWLQVLFYYQRCIQT*FHFDHS
Trigger: TGAATGATCAAAGTGAAACAATGTTTGGATGCAACG...CTGATAATAGAATAGAACTTGCAGCCAAAGGCTTTTTCCCTTTTGAGAAGACGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp CATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATACTGCCCAAGTGATCCGTTGCATCCAAACATaGTTTCACTTTGATCATTCA +
Preference number: 5 (lower is better)
Translates to: HRGGQYSEATFSYTAQVIRCIQT*FHFDHS
Trigger: TGAATGATCAAAGTGAAACAATGTTTGGATGCAACG...GATCACTTGGGCAGTATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACCTTCTACCAGTCTTTTaGGTCATGCCACTGCTTATT +
Preference number: 5 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYLLPVF*VMPLLI
Trigger: AATAAGCAGTGGCATGACCAAAAAGACTGGTAGAAG...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACGGTTTCCTGGGCAACTaGATTTATATGAGCAAACTC +
Preference number: 5 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYGFLGN*IYMSKL
Trigger: GAGTTTGCTCATATAAATCAAGTTGCCCAGGAAACC...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAATGGTCAGAAATGCACTaGAGGATAAATCCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQWSEMH*RINPRN
Trigger: ATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCA...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAACTAATAAATGTTCCATaGCCCAGGAGCTTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQLINVP*PRSLGK
Trigger: CTTTCCTAAGCTCCTGGGCAATGGAACATTTATTAG...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAAAAATACTGCTCTGACTaGAAGCAAGAGAAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQKYCSD*KQEKSL
Trigger: GAGGCTTTTCTCTTGCTTCAAGTCAGAGCAGTATTT...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp ATACTATATCCCAAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTCAAAGACTAAATTTCTaGAAGAGGTGCTTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: ILYPKKYMQHRGGQYSEAQRLNF*KRCLKV
Trigger: GACCTTTAAGCACCTCTTCAAGAAATTTAGTCTTTG...AGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTTGGGATATAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp GTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACTTGACTTGGCAGTATTTATaGAGGATTTCAATACACCAG +
Preference number: 5 (lower is better)
Translates to: VIVCSLSCLPLLVLTPYLTWQYL*RISIHQ
Trigger: CTGGTGTATTGAAATCCTCAATAAATACTGCCAAGT...CAAGTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp TATGTCATAGTATGTTCTCTTAGCTGTCTTCCCTTACTTGTTCTTACTCCTTACCAAAAGTTCTTCTTCTaGCAGTTTTCTGGCAATTTC +
Preference number: 5 (lower is better)
Translates to: YVIVCSLSCLPLLVLTPYQKFFF*QFSGNF
Trigger: GAAATTGCCAGAAAACTGCAAGAAGAAGAACTTTTG...GTAAGGAGTAAGAACAAGTAAGGGAAGACAGCTAAGAGAACATACTATGACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS-3UTR CAA 90 bp AGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATATCACTCTCTTTTGACTaGGAATTTGCTGCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: RSICSIEVANIQKLHFLISLSFD*EFAALA
Trigger: AGCTAAAGCAGCAAATTCCAAGTCAAAAGAGAGTGA...TATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp AAGAAGTATATGCAGCATAGAGGTGGCCAATATTCAGAAGCTACATTTTCTTATGTTCATCACTCTCTTTaGACTTGGAATTTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: KKYMQHRGGQYSEATFSYVHHSL*TWNLLL
Trigger: AAGCAGCAAATTCCAAGTCAAAAGAGAGTGATGAAC...ATAAGAAAATGTAGCTTCTGAATATTGGCCACCTCTATGCTGCATATACTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp ACTCCATACCTAACAAAATGGCAGTTTACAAAGGTCTTAGATACTATATCCCAAAGCAATTTCACAGTCTaGTTGTTCAAGGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: TPYLTKWQFTKVLDTISQSNFTV*LFKVFV
Trigger: TACAAAGACCTTGAACAACAAGACTGTGAAATTGCT...TTGGGATATAGTATCTAAGACCTTTGTAAACTGCCATTTTGTTAGGTATGGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS-3UTR CAA 90 bp CTTTTATTCTGCGTTGCATCCAAACATTGTTTCACTTTGATCATTCATCTCCATAGGCTCCGTCATATATaGTGCTTATTCAACAATACT +
Preference number: 5 (lower is better)
Translates to: LLFCVASKHCFTLIIHLHRLRHI*CLFNNT
Trigger: AGTATTGTTGAATAAGCACAATATATGACGGAGCCT...ATGGAGATGAATGATCAAAGTGAAACAATGTTTGGATGCAACGCAGAATAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS TCA 72 bp CCGGAGAACGGAGCGGGTCGGGCGGGCAGGGGCTGGTaGCCAAAGCAGCGGGAGACGGTCCCCGAGGCACCA +
Preference number: 6 (lower is better)
Translates to: PENGAGRAGRGW*PKQRETVPEAP
Trigger: TGGTGCCTCGGGGACCGTCTCCCGCTGCTTTGGTCACCAGCCCCTGCCCGCCCGACCCGCTCCGTTCTCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS CAA 90 bp GGCGAGCGAAGATCAGCGCCCGCTGCCGCCTCGCTGTTGTCTCCTTaGTGCTCAGTGACGCGCCGCCTGAGGCTGGGGCCCCGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: GERRSAPAAASLLSP*CSVTRRLRLGPRCA
Trigger: AGCACAGCGGGGCCCCAGCCTCAGGCGGCGCGTCACTGAGCACAAAGGAGACAACAGCGAGGCGGCAGCGGGCGCTGATCTTCGCTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS CAA 90 bp CGAGTGGCTGGCGAGCGAAGATCAGCGCCCGCTGCCGCCTCGCTGTaGTCTCCTTTGTGCTCAGTGACGCGCCGCCTGAGGCTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: RVAGERRSAPAAASL*SPLCSVTRRLRLGP
Trigger: GGGCCCCAGCCTCAGGCGGCGCGTCACTGAGCACAAAGGAGACAACAGCGAGGCGGCAGCGGGCGCTGATCTTCGCTCGCCAGCCACTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS GCA 72 bp ATGCTGACTTCAGCCATACCGGGCCAGGGTCCCGGTTaGCCCTTTAACGCGGGCTTCCCGGTCACCGCCGGC +
Preference number: 6 (lower is better)
Translates to: MLTSAIPGQGPG*PFNAGFPVTAG
Trigger: GCCGGCGGTGACCGGGAAGCCCGCGTTAAAGGGGCAACCGGGACCCTGGCCCGGTATGGCTGAAGTCAGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS CCA 72 bp GGGAGCTGCAGGTCTGTAACCGCAATTGCGAGTGGCTaGCGAGCGAAGATCAGCGCCCGCTGCCGCCTCGCT +
Preference number: 6 (lower is better)
Translates to: GSCRSVTAIASG*RAKISARCRLA
Trigger: AGCGAGGCGGCAGCGGGCGCTGATCTTCGCTCGCCAGCCACTCGCAATTGCGGTTACAGACCTGCAGCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS CCA 72 bp GAGGGGGAGCTGCAGGTCTGTAACCGCAATTGCGAGTaGCTGGCGAGCGAAGATCAGCGCCCGCTGCCGCCT +
Preference number: 6 (lower is better)
Translates to: EGELQVCNRNCE*LASEDQRPLPP
Trigger: AGGCGGCAGCGGGCGCTGATCTTCGCTCGCCAGCCACTCGCAATTGCGGTTACAGACCTGCAGCTCCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS GCA 72 bp ATTGCGAGTGGCTGGCGAGCGAAGATCAGCGCCCGCTaGCGCCTCGCTGTTGTCTCCTTTGTGCTCAGTGAC +
Preference number: 6 (lower is better)
Translates to: IASGWRAKISAR*RLAVVSFVLSD
Trigger: GTCACTGAGCACAAAGGAGACAACAGCGAGGCGGCAGCGGGCGCTGATCTTCGCTCGCCAGCCACTCGCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS CCA 72 bp GGCCCCAATCGATACCAAATATCCGGAGCCCGGAAATaGACCGGGGCCGTCCAGTACGGAGGGAGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: GPNRYQISGARK*TGAVQYGGREE
Trigger: CTCCTCTCTCCCTCCGTACTGGACGGCCCCGGTCCATTTCCGGGCTCCGGATATTTGGTATCGATTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS CCA 72 bp TCTCGGCATACTTCCTTGACTCCAGGCAGCTTGGACTaGTCGATGCTGACTTCAGCCATACCGGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: SRHTSLTPGSLD*SMLTSAIPGQG
Trigger: ACCCTGGCCCGGTATGGCTGAAGTCAGCATCGACCAGTCCAAGCTGCCTGGAGTCAAGGAAGTATGCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS GCA 72 bp AGCTGGGCCTGCGCTTTCAGATCTTCCTCTTGGAGCTaGTTAGCCACCTGGAGATCATGCTGGACCAAACGG +
Preference number: 6 (lower is better)
Translates to: SWACAFRSSSWS*LATWRSCWTKR
Trigger: CCGTTTGGTCCAGCATGATCTCCAGGTGGCTAAGCAGCTCCAAGAGGAAGATCTGAAAGCGCAGGCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS GCA 72 bp ACTCTTGGCTTCATTCCTGCGTCATGGAGGTGGAGCTaGTCCTCACTCTCTGAGAATGGAGGAGTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: TLGFIPASWRWS*SSLSENGGVLG
Trigger: GCCCAGGACTCCTCCATTCTCAGAGAGTGAGGAGCAGCTCCACCTCCATGACGCAGGAATGAAGCCAAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS CAA 72 bp GCAAAATCTCGGCATACTTCCTTGACTCCAGGCAGCTaGGACTGGTCGATGCTGACTTCAGCCATACCGGGC +
Preference number: 6 (lower is better)
Translates to: AKSRHTSLTPGS*DWSMLTSAIPG
Trigger: GCCCGGTATGGCTGAAGTCAGCATCGACCAGTCCAAGCTGCCTGGAGTCAAGGAAGTATGCCGAGATTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS CAA 90 bp GAATGGAGGAGTCCTGGGCCTGTGTCTCCTTTTTCTGTGCTCACCTaGCCCATGGTCCCTCCCATATACAACTTCCTTGCAGTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: EWRSPGPVSPFSVLT*PMVPPIYNFLAVKP
Trigger: GGGCTTCACTGCAAGGAAGTTGTATATGGGAGGGACCATGGGCAAGGTGAGCACAGAAAAAGGAGACACAGGCCCAGGACTCCTCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS TCA 72 bp CTGATCGTGGGAAGCAGAGGTCTCCGAGGCCTCTCCTaGGTGGACCGTTTCCTTTCATGCTGCTCATTGTTA +
Preference number: 6 (lower is better)
Translates to: LIVGSRGLRGLS*VDRFLSCCSLL
Trigger: TAACAATGAGCAGCATGAAAGGAAACGGTCCACTCAGGAGAGGCCTCGGAGACCTCTGCTTCCCACGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS TCA 72 bp AGTCATCACATTCAGTGCTCAGAAACACTTCACCACTaGTCGTGGGAAGCAGAGGTCTCCGAGGCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: SHHIQCSETLHH*SWEAEVSEASP
Trigger: AGGAGAGGCCTCGGAGACCTCTGCTTCCCACGATCAGTGGTGAAGTGTTTCTGAGCACTGAATGTGATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS GCA 72 bp CACCTTGCCCATGGTCCCTCCCATATACAACTTCCTTaGAGTGAAGCCCTGCTTTTTGTGAGGACTTGGGTG +
Preference number: 6 (lower is better)
Translates to: HLAHGPSHIQLP*SEALLFVRTWV
Trigger: CACCCAAGTCCTCACAAAAAGCAGGGCTTCACTGCAAGGAAGTTGTATATGGGAGGGACCATGGGCAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS CCA 72 bp TTCATCACTCTTGGCTTCATTCCTGCGTCATGGAGGTaGAGCTGCTCCTCACTCTCTGAGAATGGAGGAGTC +
Preference number: 6 (lower is better)
Translates to: FITLGFIPASWR*SCSSLSENGGV
Trigger: GACTCCTCCATTCTCAGAGAGTGAGGAGCAGCTCCACCTCCATGACGCAGGAATGAAGCCAAGAGTGATGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS CAA 72 bp AGTCCTGGGCCTGTGTCTCCTTTTTCTGTGCTCACCTaGCCCATGGTCCCTCCCATATACAACTTCCTTGCA +
Preference number: 6 (lower is better)
Translates to: SPGPVSPFSVLT*PMVPPIYNFLA
Trigger: TGCAAGGAAGTTGTATATGGGAGGGACCATGGGCAAGGTGAGCACAGAAAAAGGAGACACAGGCCCAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS TCA 72 bp TGCAAAAGGCGAGCTATGTCCTCATCCTTCTTCTCCTaGATGCGTCGTCTCTCTGCCTCAATAGCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: CKRRAMSSSFFS*MRRLSASIASF
Trigger: GAAGCTGGCTATTGAGGCAGAGAGACGACGCATTCAGGAGAAGAAGGATGAGGACATAGCTCGCCTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392455.9
ENST00000392456.4
ENST00000460064.1
CDS GCA 72 bp GTCCTCATCCTTCTTCTCCTGAATGCGTCGTCTCTCTaGCTCAATAGCCAGCTTCTCCTGAATTTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: VLILLLLNASSL*LNSQLLLNFLS
Trigger: GCTCAGGAAATTCAGGAGAAGCTGGCTATTGAGGCAGAGAGACGACGCATTCAGGAGAAGAAGGATGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS TCA 72 bp TGCCCATGGTCCCTCCCATATACAACTTCCTTGCAGTaGAGCCCTGCTTTTTGTGAGGACTTGGGTGAAAGT +
Preference number: 6 (lower is better)
Translates to: CPWSLPYTTSLQ*SPAFCEDLGES
Trigger: ACTTTCACCCAAGTCCTCACAAAAAGCAGGGCTTCACTGCAAGGAAGTTGTATATGGGAGGGACCATGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS GCA 72 bp ATCATGCTGGACCAAACGGTTCCGCTGAACGTTCGATaGCAAATGATGCTCAATCTCTTGTTCCTGCAGGCT +
Preference number: 6 (lower is better)
Translates to: IMLDQTVPLNVR*QMMLNLLFLQA
Trigger: AGCCTGCAGGAACAAGAGATTGAGCATCATTTGGCATCGAACGTTCAGCGGAACCGTTTGGTCCAGCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS CCA 72 bp GTGGACCGTTTCCTTTCATGCTGCTCATTGTTAATATaGGGATTGTCCCTCCCTTTGCCCGAGCTAGAGGAT +
Preference number: 6 (lower is better)
Translates to: VDRFLSCCSLLI*GLSLPLPELED
Trigger: ATCCTCTAGCTCGGGCAAAGGGAGGGACAATCCCCATATTAACAATGAGCAGCATGAAAGGAAACGGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS CAA 72 bp CGTTTCCTTTCATGCTGCTCATTGTTAATATGGGGATaGTCCCTCCCTTTGCCCGAGCTAGAGGATGACAGG +
Preference number: 6 (lower is better)
Translates to: RFLSCCSLLIWG*SLPLPELEDDR
Trigger: CCTGTCATCCTCTAGCTCGGGCAAAGGGAGGGACAATCCCCATATTAACAATGAGCAGCATGAAAGGAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS CAA 72 bp TCACAGTCTTTCCATCTCTTTGGAGTCTACAAGGTCTaGAGAATCCAGAACCCAATTCCCTGGCCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SQSFHLFGVYKV*RIQNPIPWPSL
Trigger: CAAGGAGGGCCAGGGAATTGGGTTCTGGATTCTCAAGACCTTGTAGACTCCAAAGAGATGGAAAGACTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS CAA 90 bp TTCCTTTCATGCTGCTCATTGTTAATATGGGGATTGTCCCTCCCTTaGCCCGAGCTAGAGGATGACAGGGATCTCTTCGATGAACAATGT +
Preference number: 6 (lower is better)
Translates to: FLSCCSLLIWGLSLP*PELEDDRDLFDEQC
Trigger: ACATTGTTCATCGAAGAGATCCCTGTCATCCTCTAGCTCGGGCAAAGGGAGGGACAATCCCCATATTAACAATGAGCAGCATGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS TCA 72 bp AGCATCATACCATTCCTGATCCCTGTGGGCCATTCGTaGTGGAGTAGATACAGCTTCTTTCATCACTCTTGG +
Preference number: 6 (lower is better)
Translates to: SIIPFLIPVGHS*WSRYSFFHHSW
Trigger: CCAAGAGTGATGAAAGAAGCTGTATCTACTCCATCACGAATGGCCCACAGGGATCAGGAATGGTATGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS TCA 72 bp GGTGGTGGCCGTGCTGGCCTTTCATTCTTAGAATGGTaGGGTTCATCACTCTCTTTTGACTTGGAATTTGCT +
Preference number: 6 (lower is better)
Translates to: GGGRAGLSFLEW*GSSLSFDLEFA
Trigger: AGCAAATTCCAAGTCAAAAGAGAGTGATGAACCTCACCATTCTAAGAATGAAAGGCCAGCACGGCCACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS GCA 72 bp CCCTGGTTGGTCTCCATCTTCATAATAGTAACTATCTaGATAAGCACGGGTTGCAGGGAACTCTGGAAAGTG +
Preference number: 6 (lower is better)
Translates to: PWLVSIFIIVTI*ISTGCRELWKV
Trigger: CACTTTCCAGAGTTCCCTGCAACCCGTGCTTATGCAGATAGTTACTATTATGAAGATGGAGACCAACCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS CCA 72 bp CTTCCTTGCAGTGAAGCCCTGCTTTTTGTGAGGACTTaGGTGAAAGTCGATCTTGGTGTCGAGACTGTTTTT +
Preference number: 6 (lower is better)
Translates to: LPCSEALLFVRT*VKVDLGVETVF
Trigger: AAAAACAGTCTCGACACCAAGATCGACTTTCACCCAAGTCCTCACAAAAAGCAGGGCTTCACTGCAAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392455.9
CDS CAA 72 bp GCTGTTTTTGGCTTCCACTCGGGGTCTTGCTTTCTTTaGTCCAAAGATGATTTCTCCCGCTCCTTGGCTTTT +
Preference number: 6 (lower is better)
Translates to: AVFGFHSGSCFL*SKDDFSRSLAF
Trigger: AAAAGCCAAGGAGCGGGAGAAATCATCTTTGGACAAAAGAAAGCAAGACCCCGAGTGGAAGCCAAAAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS TCA 72 bp TGCAGTTTTCTGGCAATTTCAGCATCATACCATTCCTaGTCCCTGTGGGCCATTCGTGATGGAGTAGATACA +
Preference number: 6 (lower is better)
Translates to: CSFLAISASYHS*SLWAIRDGVDT
Trigger: TGTATCTACTCCATCACGAATGGCCCACAGGGATCAGGAATGGTATGATGCTGAAATTGCCAGAAAACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392455.9
ENST00000392456.4
CDS GCA 72 bp TGGCTTCATTCCTCCATCTTCATAATAGTAACTATCTaGATAAGCACGGGTTGCAGGGAACTCTGGAAAGTG +
Preference number: 6 (lower is better)
Translates to: WLHSSIFIIVTI*ISTGCRELWKV
Trigger: CACTTTCCAGAGTTCCCTGCAACCCGTGCTTATGCAGATAGTTACTATTATGAAGATGGAGGAATGAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392456.4
CDS GCA 72 bp GGAATTGTTACCTCCATCTTCATAATAGTAACTATCTaGATAAGCACGGGTTGCAGGGAACTCTGGAAAGTG +
Preference number: 6 (lower is better)
Translates to: GIVTSIFIIVTI*ISTGCRELWKV
Trigger: CACTTTCCAGAGTTCCCTGCAACCCGTGCTTATGCAGATAGTTACTATTATGAAGATGGAGGTAACAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460064.1