Pregenerated sensors for CCDC43 (Homo sapiens)
Ensembl gene IDs: ENSG00000180329Ensembl transcript IDs: ENST00000315286.13, ENST00000457422.6, ENST00000588210.1, ENST00000588687.5, ENST00000592333.1
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACAATTTAATGTGGTTTGTGACAGAAGTAGAAATGGAGAGCTTCTaGTCACTTTTGACTCTCCCAGTTTTTCCATTCACTCATTCATTC | + |
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Preference number: 1 (lower is better) Translates to: YNLMWFVTEVEMESF*SLLTLPVFPFTHSF Trigger: GAATGAATGAGTGAATGGAAAAACTGGGAGAGTCAAAAGTGAGCAGAAGCTCTCCATTTCTACTTCTGTCACAAACCACATTAAATTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR TCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGGGATTCATCCCGAAGTaGGTCTCGCTCCAGTTTTCG | + |
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Preference number: 2 (lower is better) Translates to: TICCLKSSGEGPYLQFNVGFIPK*VSLQFS Trigger: CGAAAACTGGAGCGAGACTCACTTCGGGATGAATCC...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457422.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCCCTTGCGCTCCTGCTTaGCTAGTTTGTCTCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RDWQTFPPTGQVVNILDFPCAPA*LVCLSP Trigger: GGGAGAGAGACAAACTAGCCAAGCAGGAGCGCAAGG...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457422.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCAGACAATCTGCTGCCTaGAGTCAAGTGGAGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RDWQTFPPTGQVVNILDFRQSAA*SQVEKG Trigger: GCCCTTCTCCACTTGACTTCAGGCAGCAGATTGTCT...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR TCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGAGACAATCTGCTGCCTaGAGTCAAGTGGAGAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TPGIKYLLCLVREIAVLRRQSAA*SQVEKG Trigger: GCCCTTCTCCACTTGACTTCAGGCAGCAGATTGTCT...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR GCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGTTGTCTCTCTCCCTCTaGAGCTTGTCCTGTTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TPGIKYLLCLVREIAVLRLSLSL*SLSCSF Trigger: GAAGGAACAGGACAAGCTGCAGAGGGAGAGAGACAA...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457422.6 |
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| 3UTR-3UTR TCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGGCTTCTGCTCACTTTTaGCTCTCCCAGTTTTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: TICCLKSSGEGPYLQFNVASAHF*LSQFFH Trigger: ATGGAAAAACTGGGAGAGTCAAAAGTGAGCAGAAGC...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR GCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGCCAAAGCAATGTGCATaGCCACATTTTATCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TICCLKSSGEGPYLQFNVPKQCA*PHFISG Trigger: CCCTGAGATAAAATGTGGGCATGCACATTGCTTTGG...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR GCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACATTTTCCTTGCGCTCCTaGTTGGCTAGTTTGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: DWQTFPPTGQVVNILDFTFSLRS*LASLSL Trigger: GAGAGACAAACTAGCCAAGCAGGAGCGCAAGGAAAA...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457422.6 |
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| 3UTR-3UTR TCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCATCTCAGGGAGGGATTaGTTATGTTTCTGCTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SHKTILHLQLNTDSKAMCISGRD*LCFCSF Trigger: GAAGGAGCAGAAACATAATCAATCCCTCCCTGAGAT...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR TCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGATCTCAGGGAGGGATTaGTTATGTTTCTGCTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TPGIKYLLCLVREIAVLRISGRD*LCFCSF Trigger: GAAGGAGCAGAAACATAATCAATCCCTCCCTGAGAT...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR TCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCGCTTCTGCTCACTTTTaGCTCTCCCAGTTTTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: RDWQTFPPTGQVVNILDFASAHF*LSQFFH Trigger: ATGGAAAAACTGGGAGAGTCAAAAGTGAGCAGAAGC...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR GCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGCCAAAGCAATGTGCATaGCCACATTTTATCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TPGIKYLLCLVREIAVLRPKQCA*PHFISG Trigger: CCCTGAGATAAAATGTGGGCATGCACATTGCTTTGG...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR GCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGGAAATGGAGAGCTTCTaGTCACTTTTGACTCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TPGIKYLLCLVREIAVLREMESF*SLLTLP Trigger: TGGGAGAGTCAAAAGTGAGCAGAAGCTCTCCATTTC...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR CCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACACTGCCTGAAGTCAAGTaGAGAAGGGCCTTATTTACA | + |
|
Preference number: 2 (lower is better) Translates to: DWQTFPPTGQVVNILDFTLPEVK*RRALFT Trigger: TGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAG...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR CCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCCTGCCTGAAGTCAAGTaGAGAAGGGCCTTATTTACA | + |
|
Preference number: 2 (lower is better) Translates to: RDWQTFPPTGQVVNILDFLPEVK*RRALFT Trigger: TGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAG...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR CCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCTGTTCCTTCTTCCTTTaGGATTCATCCCGAAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RDWQTFPPTGQVVNILDFCSFFL*DSSRSE Trigger: CTCACTTCGGGATGAATCCCAAAGGAAGAAGGAACA...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457422.6 |
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| 3UTR-3UTR TCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGTACTACACTTACAGCTaGATACTGACTCCAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TICCLKSSGEGPYLQFNVYYTYS*ILTPKQ Trigger: TTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTA...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR TCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGGTGACACAGCCTAGATaGGGAAAATATGTAACTATC | + |
|
Preference number: 2 (lower is better) Translates to: TICCLKSSGEGPYLQFNVVTQPR*GKYVTI Trigger: GATAGTTACATATTTTCCTCATCTAGGCTGTGTCAC...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR GCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGCTTGGGAAACTACTTTaGAATGCACTCTCATTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: TICCLKSSGEGPYLQFNVLGKLL*NALSFL Trigger: GAGAAATGAGAGTGCATTGCAAAGTAGTTTCCCAAG...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR TCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCTCAACTATAATAATCTaGTTGCCCACCCCACCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SHKTILHLQLNTDSKAMCSTIII*LPTPPK Trigger: TTTTGGTGGGGTGGGCAATCAGATTATTATAGTTGA...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR TCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACATCAACTATAATAATCTaGTTGCCCACCCCACCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: DWQTFPPTGQVVNILDFTSTIII*LPTPPK Trigger: TTTTGGTGGGGTGGGCAATCAGATTATTATAGTTGA...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR GCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCCTTGGGAAACTACTTTaGAATGCACTCTCATTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: RDWQTFPPTGQVVNILDFLGKLL*NALSFL Trigger: GAGAAATGAGAGTGCATTGCAAAGTAGTTTCCCAAG...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR CAA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGTCCTGCTTGGCTAGTTaGTCTCTCTCCCTCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: TICCLKSSGEGPYLQFNVSCLAS*SLSLCS Trigger: GCTGCAGAGGGAGAGAGACAAACTAGCCAAGCAGGA...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457422.6 |
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| 3UTR-3UTR CAA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGTCCTTGCGCTCCTGCTaGGCTAGTTTGTCTCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: TICCLKSSGEGPYLQFNVSLRSC*ASLSLS Trigger: GGAGAGAGACAAACTAGCCAAGCAGGAGCGCAAGGA...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457422.6 |
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| 3UTR-3UTR CAA 90 bp | AAATGCTTCCCTCAGGTTGTGACTTTACTAGGCAAAATGGAACGTCTTCGGAGTGTATCTCTACTGCTCTaGATAGACACTTGGAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: KCFPQVVTLLGKMERLRSVSLLL*IDTWSL Trigger: TAGACTCCAAGTGTCTATCAAGAGCAGTAGAGATAC...ACTCCGAAGACGTTCCATTTTGCCTAGTAAAGTCACAACCTGAGGGAAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588687.5 |
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| 3UTR-3UTR CAA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGCCAACAATGATATCCTaGCACCCAATAGTGACACAG | + |
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Preference number: 3 (lower is better) Translates to: TICCLKSSGEGPYLQFNVPTMIS*HPIVTQ Trigger: CTGTGTCACTATTGGGTGCAAGGATATCATTGTTGG...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR CAA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCCCAACAATGATATCCTaGCACCCAATAGTGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: RDWQTFPPTGQVVNILDFPTMIS*HPIVTQ Trigger: CTGTGTCACTATTGGGTGCAAGGATATCATTGTTGG...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR CAA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGCCCCATTCCAGATCTTaGGTACAGTCATCAACTATA | + |
|
Preference number: 3 (lower is better) Translates to: TPGIKYLLCLVREIAVLRPHSRS*VQSSTI Trigger: TATAGTTGATGACTGTACCAAAGATCTGGAATGGGG...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR-3UTR CAA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACACCCCATTCCAGATCTTaGGTACAGTCATCAACTATA | + |
|
Preference number: 3 (lower is better) Translates to: DWQTFPPTGQVVNILDFTPHSRS*VQSSTI Trigger: TATAGTTGATGACTGTACCAAAGATCTGGAATGGGG...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| 3UTR TCA 72 bp | TCTATTTCAGCCATAAAACAATACTACACTTACAGCTaGATACTGACTCCAAAGCAATGTGCATGCCCACAT | + |
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Preference number: 3 (lower is better) Translates to: SISAIKQYYTYS*ILTPKQCACPH Trigger: ATGTGGGCATGCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCTGAAATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR GCA 90 bp | AAATGCTTCCCTCAGGTTGTGACTTTACTAGGCAAAATGGAACGTCTTCGGAGTTCGGTCCACTCCCAGTaGCTCCAACCGTCCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: KCFPQVVTLLGKMERLRSSVHSQ*LQPSVQ Trigger: CTGGACGGACGGTTGGAGGCACTGGGAGTGGACCGA...ACTCCGAAGACGTTCCATTTTGCCTAGTAAAGTCACAACCTGAGGGAAGCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588687.5 |
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| CDS-3UTR CCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGTGGGCGCCGCCATCTTaGGGTCAGGGTCCTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVWAPPS*GQGPAS Trigger: GCTTGCAGGACCCTGACCCCAAGATGGCGGCGCCCA...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000457422.6 |
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| CDS-3UTR GCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGTCGGTCCACTCCCAGTaGCTCCAACCGTCCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVSVHSQ*LQPSVQ Trigger: CTGGACGGACGGTTGGAGGCACTGGGAGTGGACCGA...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGTGGGCGCCGCCATCTTaGGGTCAGGGTCCTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: TPGIKYLLCLVREIAVLRWAPPS*GQGPAS Trigger: GCTTGCAGGACCCTGACCCCAAGATGGCGGCGCCCA...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000457422.6 |
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| CDS-3UTR GCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCTCGGTCCACTCCCAGTaGCTCCAACCGTCCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFSVHSQ*LQPSVQ Trigger: CTGGACGGACGGTTGGAGGCACTGGGAGTGGACCGA...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR GCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGGCAGAGAGGATCCCCTaGAGAGCGTCCAGCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TPGIKYLLCLVREIAVLRAERIP*RASSFS Trigger: AGAGAAGCTGGACGCTCTGCAGGGGATCCTCTCTGC...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR GCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCGCAGAGAGGATCCCCTaGAGAGCGTCCAGCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFAERIP*RASSFS Trigger: AGAGAAGCTGGACGCTCTGCAGGGGATCCTCTCTGC...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGCCTTGCGCTCCTGCTTaGCTAGTTTGTCTCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVPCAPA*LVCLSP Trigger: GGGAGAGAGACAAACTAGCCAAGCAGGAGCGCAAGG...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CCA 90 bp | AAATGCTTCCCTCAGGTTGTGACTTTACTAGGCAAAATGGAACGTCTTCGGAGTTTGTTTCCCCCAGCATaGTGTCAGGACACAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KCFPQVVTLLGKMERLRSLFPPA*CQDTVS Trigger: GCTTACTGTGTCCTGACACCATGCTGGGGGAAACAA...ACTCCGAAGACGTTCCATTTTGCCTAGTAAAGTCACAACCTGAGGGAAGCATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588687.5 |
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| CDS-3UTR CCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGGTCACATCAGCATACTaGGCCAGGAGGGCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVVTSAY*ARRAAF Trigger: AAAAGCTGCCCTCCTGGCCCAGTATGCTGATGTGAC...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGCCTTGCGCTCCTGCTTaGCTAGTTTGTCTCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGIKYLLCLVREIAVLRPCAPA*LVCLSP Trigger: GGGAGAGAGACAAACTAGCCAAGCAGGAGCGCAAGG...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR TCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGGGATTCATCCCGAAGTaGGTCTCGCTCCAGTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: TPGIKYLLCLVREIAVLRGFIPK*VSLQFS Trigger: CGAAAACTGGAGCGAGACTCACTTCGGGATGAATCC...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCGGATTCATCCCGAAGTaGGTCTCGCTCCAGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCGFIPK*VSLQFS Trigger: CGAAAACTGGAGCGAGACTCACTTCGGGATGAATCC...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCGGATTCATCCCGAAGTaGGTCTCGCTCCAGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFGFIPK*VSLQFS Trigger: CGAAAACTGGAGCGAGACTCACTTCGGGATGAATCC...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACAAGACAATCTGCTGCCTaGAGTCAAGTGGAGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DWQTFPPTGQVVNILDFTRQSAA*SQVEKG Trigger: GCCCTTCTCCACTTGACTTCAGGCAGCAGATTGTCT...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCAGACAATCTGCTGCCTaGAGTCAAGTGGAGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCRQSAA*SQVEKG Trigger: GCCCTTCTCCACTTGACTTCAGGCAGCAGATTGTCT...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGTTGTCTCTCTCCCTCTaGAGCTTGTCCTGTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVLSLSL*SLSCSF Trigger: GAAGGAACAGGACAAGCTGCAGAGGGAGAGAGACAA...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCGTCACATCAGCATACTaGGCCAGGAGGGCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCVTSAY*ARRAAF Trigger: AAAAGCTGCCCTCCTGGCCCAGTATGCTGATGTGAC...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | CAAAATGGAACGTCTTCGGAGTTCTCTTCTTCATGCCAGTATCTCTACTGCTCTAACATTCTGAGTTTCTaGCCATCGTTCCACAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QNGTSSEFSSSCQYLYCSNILSF*PSFHNL Trigger: GAGATTGTGGAACGATGGTCAGAAACTCAGAATGTT...AGAGCAGTAGAGATACTGGCATGAAGAAGAGAACTCCGAAGACGTTCCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588687.5 |
||
| CDS-3UTR GCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACATTGTCTCTCTCCCTCTaGAGCTTGTCCTGTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DWQTFPPTGQVVNILDFTLSLSL*SLSCSF Trigger: GAAGGAACAGGACAAGCTGCAGAGGGAGAGAGACAA...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGTTTTCCTTGCGCTCCTaGTTGGCTAGTTTGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVFSLRS*LASLSL Trigger: GAGAGACAAACTAGCCAAGCAGGAGCGCAAGGAAAA...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGATCTCAGGGAGGGATTaGTTATGTTTCTGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVISGRD*LCFCSF Trigger: GAAGGAGCAGAAACATAATCAATCCCTCCCTGAGAT...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGACTACGATTTGTGCCTaGTTCTCAATTAGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVTTICA*FSIRVA Trigger: TGCCACCCTAATTGAGAAGCAGGCACAAATCGTAGT...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGTTTTCCTTGCGCTCCTaGTTGGCTAGTTTGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPGIKYLLCLVREIAVLRFSLRS*LASLSL Trigger: GAGAGACAAACTAGCCAAGCAGGAGCGCAAGGAAAA...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | AAAATGGAACGTCTTCGGAGTTCTCTTCTTCATGCCAGTATCTCTACTGCTCTTGAGTTCTCTTCTTCATaGCAGTATCTCTACTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KMERLRSSLLHASISTALEFSSS*QYLYCS Trigger: AGAGCAGTAGAGATACTGGCATGAAGAAGAGAACTC...AAGAGCAGTAGAGATACTGGCATGAAGAAGAGAACTCCGAAGACGTTCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588687.5 |
||
| CDS-3UTR CCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGGCTTCTCAATTAGGGTaGCAATGGCCTGTACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVASQLG*QWPVLH Trigger: ATGAAGTACAGGCCATTGCCACCCTAATTGAGAAGC...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGTTGGTGACAACATTCTaGGTTTCTGACCATCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGIKYLLCLVREIAVLRLVTTF*VSDHRS Trigger: GGAACGATGGTCAGAAACTCAGAATGTTGTCACCAA...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACAATCTCAGGGAGGGATTaGTTATGTTTCTGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DWQTFPPTGQVVNILDFTISGRD*LCFCSF Trigger: GAAGGAGCAGAAACATAATCAATCCCTCCCTGAGAT...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCATCTCAGGGAGGGATTaGTTATGTTTCTGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFISGRD*LCFCSF Trigger: GAAGGAGCAGAAACATAATCAATCCCTCCCTGAGAT...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCGCTTCTGCTCACTTTTaGCTCTCCCAGTTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCASAHF*LSQFFH Trigger: ATGGAAAAACTGGGAGAGTCAAAAGTGAGCAGAAGC...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACAGCTTCTGCTCACTTTTaGCTCTCCCAGTTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DWQTFPPTGQVVNILDFTASAHF*LSQFFH Trigger: ATGGAAAAACTGGGAGAGTCAAAAGTGAGCAGAAGC...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACTACGATTTGTGCCTaGTTCTCAATTAGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFTTICA*FSIRVA Trigger: TGCCACCCTAATTGAGAAGCAGGCACAAATCGTAGT...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACAACTACGATTTGTGCCTaGTTCTCAATTAGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DWQTFPPTGQVVNILDFTTTICA*FSIRVA Trigger: TGCCACCCTAATTGAGAAGCAGGCACAAATCGTAGT...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACACCAAAGCAATGTGCATaGCCACATTTTATCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DWQTFPPTGQVVNILDFTPKQCA*PHFISG Trigger: CCCTGAGATAAAATGTGGGCATGCACATTGCTTTGG...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCCCAAAGCAATGTGCATaGCCACATTTTATCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCPKQCA*PHFISG Trigger: CCCTGAGATAAAATGTGGGCATGCACATTGCTTTGG...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCGAAATGGAGAGCTTCTaGTCACTTTTGACTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFEMESF*SLLTLP Trigger: TGGGAGAGTCAAAAGTGAGCAGAAGCTCTCCATTTC...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACAGAAATGGAGAGCTTCTaGTCACTTTTGACTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DWQTFPPTGQVVNILDFTEMESF*SLLTLP Trigger: TGGGAGAGTCAAAAGTGAGCAGAAGCTCTCCATTTC...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | CTTCCCTCAGGTTGTGACTTTACTAGGCAAAATGGAACGTCTTCGGAGTTCTCTCTGTCATCTCTATTCTaGTTCACTGAAGATTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSGCDFTRQNGTSSEFSLSSLF*FTEDLF Trigger: AAACAAATCTTCAGTGAAGCAGAATAGAGATGACAG...AGAGAACTCCGAAGACGTTCCATTTTGCCTAGTAAAGTCACAACCTGAGGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588687.5 |
||
| CDS-3UTR CCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGCAATTAGGGTGGCAATaGCCTGTACTTCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVQLGWQ*PVLHLL Trigger: AAGAAGATGAAGTACAGGCCATTGCCACCCTAATTG...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCGCTTCTCAATTAGGGTaGCAATGGCCTGTACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFASQLG*QWPVLH Trigger: ATGAAGTACAGGCCATTGCCACCCTAATTGAGAAGC...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCTGTTCCTTCTTCCTTTaGGATTCATCCCGAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCCSFFL*DSSRSE Trigger: CTCACTTCGGGATGAATCCCAAAGGAAGAAGGAACA...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCCTGCCTGAAGTCAAGTaGAGAAGGGCCTTATTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCLPEVK*RRALFT Trigger: TGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAG...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCGGACATCTTCCACATTaGTGTTTCGGAACAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCGHLPH*CFGTES Trigger: GGATTCTGTTCCGAAACACCAATGTGGAAGATGTCC...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457422.6 |
||
| CDS-3UTR CCA 90 bp | AAAATGCTTCCCTCAGGTTGTGACTTTACTAGGCAAAATGGAACGTCTTCGGAGCTCTTGATAGACACTTaGAGTCTATTCACATTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KMLPSGCDFTRQNGTSSELLIDT*SLFTLY Trigger: GTACAATGTGAATAGACTCCAAGTGTCTATCAAGAG...CTCCGAAGACGTTCCATTTTGCCTAGTAAAGTCACAACCTGAGGGAAGCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588687.5 |
||
| CDS-3UTR TCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCAACATTCTGAGTTTCTaGCCATCGTTCCACAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFNILSF*PSFHNL Trigger: GAGATTGTGGAACGATGGTCAGAAACTCAGAATGTT...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACAAACATTCTGAGTTTCTaGCCATCGTTCCACAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DWQTFPPTGQVVNILDFTNILSF*PSFHNL Trigger: GAGATTGTGGAACGATGGTCAGAAACTCAGAATGTT...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCAACATTCTGAGTTTCTaGCCATCGTTCCACAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCNILSF*PSFHNL Trigger: GAGATTGTGGAACGATGGTCAGAAACTCAGAATGTT...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGTCAACTATAATAATCTaGTTGCCCACCCCACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVSTIII*LPTPPK Trigger: TTTTGGTGGGGTGGGCAATCAGATTATTATAGTTGA...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR GCA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGATCATCCTTCTCATCTaGTTCATCCTCTTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TICCLKSSGEGPYLQFNVIILLI*FILFIC Trigger: ACAGATGAAGAGGATGAAGCAGATGAGAAGGATGAT...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315286.13 |
||
| CDS-3UTR CCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCCAATTAGGGTGGCAATaGCCTGTACTTCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFQLGWQ*PVLHLL Trigger: AAGAAGATGAAGTACAGGCCATTGCCACCCTAATTG...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGCAATTAGGGTGGCAATaGCCTGTACTTCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPGIKYLLCLVREIAVLRQLGWQ*PVLHLL Trigger: AAGAAGATGAAGTACAGGCCATTGCCACCCTAATTG...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCGGACATCTTCCACATTaGTGTTTCGGAACAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFGHLPH*CFGTEV Trigger: AACTTCTGTTCCGAAACACCAATGTGGAAGATGTCC...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000588210.1 |
||
| CDS-3UTR CCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCGGACATCTTCCACATTaGTGTTTCGGAACAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCGHLPH*CFGTEV Trigger: AACTTCTGTTCCGAAACACCAATGTGGAAGATGTCC...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCTCAACTATAATAATCTaGTTGCCCACCCCACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDWQTFPPTGQVVNILDFSTIII*LPTPPK Trigger: TTTTGGTGGGGTGGGCAATCAGATTATTATAGTTGA...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCTACTACACTTACAGCTaGATACTGACTCCAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SHKTILHLQLNTDSKAMCYYTYS*ILTPKQ Trigger: TTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTA...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGTACTACACTTACAGCTaGATACTGACTCCAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TPGIKYLLCLVREIAVLRYYTYS*ILTPKQ Trigger: TTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTA...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR TCA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGGTGACACAGCCTAGATaGGGAAAATATGTAACTATC | + |
|
Preference number: 4 (lower is better) Translates to: TPGIKYLLCLVREIAVLRVTQPR*GKYVTI Trigger: GATAGTTACATATTTTCCTCATCTAGGCTGTGTCAC...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CAA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACACTGGGCGCCGCCATCTaGGGGTCAGGGTCCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DWQTFPPTGQVVNILDFTLGAAI*GSGSCK Trigger: CTTGCAGGACCCTGACCCCAAGATGGCGGCGCCCAG...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000457422.6 |
||
| CDS-3UTR CAA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCCTGGGCGCCGCCATCTaGGGGTCAGGGTCCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RDWQTFPPTGQVVNILDFLGAAI*GSGSCK Trigger: CTTGCAGGACCCTGACCCCAAGATGGCGGCGCCCAG...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000457422.6 |
||
| CDS TCA 90 bp | CTGCAGCTTGTCCTGTTCCTTCTTCCTTTGGGATTCATCCCGAAGTaGGTCTCGCTCCAGTTTTCGGGCATTAAGGACATCTTCCACATT | + |
|
Preference number: 5 (lower is better) Translates to: LQLVLFLLPLGFIPK*VSLQFSGIKDIFHI Trigger: AATGTGGAAGATGTCCTTAATGCCCGAAAACTGGAGCGAGACTCACTTCGGGATGAATCCCAAAGGAAGAAGGAACAGGACAAGCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS GCA 90 bp | TCATCTGTCACATCAGCATACTGGGCCAGGAGGGCAGCTTTTCTCTaGTTCTCCTCTTCTGACACCATCCTTGGCTTTACTACGATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVTSAYWARRAAFL*FSSSDTILGFTTIC Trigger: ACAAATCGTAGTAAAGCCAAGGATGGTGTCAGAAGAGGAGAAGCAGAGAAAAGCTGCCCTCCTGGCCCAGTATGCTGATGTGACAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 ENST00000592333.1 |
||
| CDS TCA 90 bp | AGCAACTTGCCAAAGGTCACTGTAAACCCACAAATATGTCTGGCTTaGGCTTTAGGGAATGGTGCCGAGACTCCAGAAAGGATATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SNLPKVTVNPQICLA*ALGNGAETPERIFL Trigger: GAGGAATATCCTTTCTGGAGTCTCGGCACCATTCCCTAAAGCTCAAGCCAGACATATTTGTGGGTTTACAGTGACCTTTGGCAAGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592333.1 |
||
| CDS GCA 90 bp | CACTGTAAACCCACAAATATGTCTGGCTTGAGCTTTAGGGAATGGTaGCGAGACTCCAGAAAGGATATTCCTCTTCATCTGTCACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: HCKPTNMSGLSFREW*RDSRKDIPLHLSHQ Trigger: CTGATGTGACAGATGAAGAGGAATATCCTTTCTGGAGTCTCGGCACCATTCCCTAAAGCTCAAGCCAGACATATTTGTGGGTTTACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592333.1 |
||
| CDS-3UTR CAA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCTCCTGCTTGGCTAGTTaGTCTCTCTCCCTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHKTILHLQLNTDSKAMCSCLAS*SLSLCS Trigger: GCTGCAGAGGGAGAGAGACAAACTAGCCAAGCAGGA...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CAA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACATCCTGCTTGGCTAGTTaGTCTCTCTCCCTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DWQTFPPTGQVVNILDFTSCLAS*SLSLCS Trigger: GCTGCAGAGGGAGAGAGACAAACTAGCCAAGCAGGA...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CAA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCTCCTGCTTGGCTAGTTaGTCTCTCTCCCTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RDWQTFPPTGQVVNILDFSCLAS*SLSLCS Trigger: GCTGCAGAGGGAGAGAGACAAACTAGCCAAGCAGGA...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CAA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGTCCTTGCGCTCCTGCTaGGCTAGTTTGTCTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPGIKYLLCLVREIAVLRSLRSC*ASLSLS Trigger: GGAGAGAGACAAACTAGCCAAGCAGGAGCGCAAGGA...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CAA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACATCCTTGCGCTCCTGCTaGGCTAGTTTGTCTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DWQTFPPTGQVVNILDFTSLRSC*ASLSLS Trigger: GGAGAGAGACAAACTAGCCAAGCAGGAGCGCAAGGA...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS GCA 90 bp | TTCTCCTCTTCTGACACCATCCTTGGCTTTACTACGATTTGTGCCTaGTTCTCAATTAGGGTGGCAATGGCCTGTACTTCATCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSSSDTILGFTTICA*FSIRVAMACTSSSF Trigger: AAAAGAAGATGAAGTACAGGCCATTGCCACCCTAATTGAGAAGCAGGCACAAATCGTAGTAAAGCCAAGGATGGTGTCAGAAGAGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 ENST00000592333.1 |
||
| CDS-3UTR CAA 90 bp | CTTCCCTCAGGTTGTGACTTTACTAGGCAAAATGGAACGTCTTCGGAGTTCTCTGTATCTCTACTGCTCTaGATAGACACTTGGAGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LPSGCDFTRQNGTSSEFSVSLLL*IDTWSL Trigger: TAGACTCCAAGTGTCTATCAAGAGCAGTAGAGATAC...AGAGAACTCCGAAGACGTTCCATTTTGCCTAGTAAAGTCACAACCTGAGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588687.5 |
||
| CDS-3UTR CAA 90 bp | CAAAATGGAACGTCTTCGGAGTTCTCTTCTTCATGCCAGTATCTCTACTGCTCTAAACACTTTCCATTTTaGTTTCCCCCAGCATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QNGTSSEFSSSCQYLYCSKHFPF*FPPAWC Trigger: ACACCATGCTGGGGGAAACAAAAATGGAAAGTGTTT...AGAGCAGTAGAGATACTGGCATGAAGAAGAGAACTCCGAAGACGTTCCATTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000588687.5 |
||
| CDS-3UTR CAA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGCTTCTGACACCATCCTaGGCTTTACTACGATTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TICCLKSSGEGPYLQFNVLLTPS*ALLRFV Trigger: CACAAATCGTAGTAAAGCCAAGGATGGTGTCAGAAG...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CAA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGAGGACATCTTCCACATaGGTGTTTCGGAACAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: TICCLKSSGEGPYLQFNVRTSST*VFRNRI Trigger: GATTCTGTTCCGAAACACCAATGTGGAAGATGTCCT...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457422.6 |
||
| CDS-3UTR CAA 90 bp | AAAATGGAACGTCTTCGGAGTTCTCTTCTTCATGCCAGTATCTCTACTGCTCTTTGGAGTCTATTCACATaGTACAGTCACGTAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KMERLRSSLLHASISTALWSLFT*YSHVER Trigger: CCTTTCTACGTGACTGTACAATGTGAATAGACTCCA...AAGAGCAGTAGAGATACTGGCATGAAGAAGAGAACTCCGAAGACGTTCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588687.5 |
||
| CDS-3UTR CAA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGCGTTCCACAATCTCCTaGCAGATATTAAGGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TPGIKYLLCLVREIAVLRRSTIS*QILRRE Trigger: TTCCCTCCTTAATATCTGCAAGGAGATTGTGGAACG...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CAA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACACGTTCCACAATCTCCTaGCAGATATTAAGGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DWQTFPPTGQVVNILDFTRSTIS*QILRRE Trigger: TTCCCTCCTTAATATCTGCAAGGAGATTGTGGAACG...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CAA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCCGTTCCACAATCTCCTaGCAGATATTAAGGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SHKTILHLQLNTDSKAMCRSTIS*QILRRE Trigger: TTCCCTCCTTAATATCTGCAAGGAGATTGTGGAACG...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CAA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCCTTCTGACACCATCCTaGGCTTTACTACGATTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RDWQTFPPTGQVVNILDFLLTPS*ALLRFV Trigger: CACAAATCGTAGTAAAGCCAAGGATGGTGTCAGAAG...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CAA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCAGGACATCTTCCACATaGGTGTTTCGGAACAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SHKTILHLQLNTDSKAMCRTSST*VFRNRS Trigger: ACTTCTGTTCCGAAACACCAATGTGGAAGATGTCCT...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000588210.1 |
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| CDS-3UTR CAA 90 bp | AGAGATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCAGGACATCTTCCACATaGGTGTTTCGGAACAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RDWQTFPPTGQVVNILDFRTSST*VFRNRS Trigger: ACTTCTGTTCCGAAACACCAATGTGGAAGATGTCCT...GAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000588210.1 |
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| CDS-3UTR CAA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCCCAACAATGATATCCTaGCACCCAATAGTGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SHKTILHLQLNTDSKAMCPTMIS*HPIVTQ Trigger: CTGTGTCACTATTGGGTGCAAGGATATCATTGTTGG...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CAA 90 bp | ACCCCTGGTATAAAATATCTACTTTGTCTTGTCAGAGAAATTGCTGTCCTTAGGCCAACAATGATATCCTaGCACCCAATAGTGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: TPGIKYLLCLVREIAVLRPTMIS*HPIVTQ Trigger: CTGTGTCACTATTGGGTGCAAGGATATCATTGTTGG...CCTAAGGACAGCAATTTCTCTGACAAGACAAAGTAGATATTTTATACCAGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CAA 90 bp | ACAATCTGCTGCCTGAAGTCAAGTGGAGAAGGGCCTTATTTACAATTTAATGTGGGTATAAAACAGAGATaGGCAAACCTTTCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TICCLKSSGEGPYLQFNVGIKQR*ANLSSN Trigger: GTTGGAGGAAAGGTTTGCCAATCTCTGTTTTATACC...CACATTAAATTGTAAATAAGGCCCTTCTCCACTTGACTTCAGGCAGCAGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
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| CDS-3UTR CAA 90 bp | AAAATGGAACGTCTTCGGAGTTCTCTTCTTCATGCCAGTATCTCTACTGCTCTTGCTCTTGATAGACACTaGGAGTCTATTCACATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KMERLRSSLLHASISTALALDRH*ESIHIV Trigger: TACAATGTGAATAGACTCCAAGTGTCTATCAAGAGC...AAGAGCAGTAGAGATACTGGCATGAAGAAGAGAACTCCGAAGACGTTCCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588687.5 |
||
| CDS CCA 90 bp | GTTCTCTTCTTCATGCCAGTATCTCTACTGCTCTTGATAGACACTTaGAGTCTATTCACATTGTACAGTCACGTAGAAAGGATGAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: VLFFMPVSLLLLIDT*SLFTLYSHVERMKL Trigger: CAATTTCATCCTTTCTACGTGACTGTACAATGTGAATAGACTCCAAGTGTCTATCAAGAGCAGTAGAGATACTGGCATGAAGAAGAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588687.5 |
||
| CDS-3UTR CAA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCCCCCATTCCAGATCTTaGGTACAGTCATCAACTATA | + |
|
Preference number: 5 (lower is better) Translates to: SHKTILHLQLNTDSKAMCPHSRS*VQSSTI Trigger: TATAGTTGATGACTGTACCAAAGATCTGGAATGGGG...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CAA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCGGTATAAAACAGAGATaGGCAAACCTTTCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SHKTILHLQLNTDSKAMCGIKQR*ANLSSN Trigger: GTTGGAGGAAAGGTTTGCCAATCTCTGTTTTATACC...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CAA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACAGGTATAAAACAGAGATaGGCAAACCTTTCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: DWQTFPPTGQVVNILDFTGIKQR*ANLSSN Trigger: GTTGGAGGAAAGGTTTGCCAATCTCTGTTTTATACC...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS-3UTR CAA 90 bp | AGCCATAAAACAATACTACACTTACAGCTGAATACTGACTCCAAAGCAATGTGCTTTCGGAACAGAAGTTaGTCAGAACCAATGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: SHKTILHLQLNTDSKAMCFRNRS*SEPMFI Trigger: AATGAACATTGGTTCTGACAAACTTCTGTTCCGAAA...GCACATTGCTTTGGAGTCAGTATTCAGCTGTAAGTGTAGTATTGTTTTATGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000588210.1 |
||
| CDS-3UTR CAA 90 bp | GATTGGCAAACCTTTCCTCCAACAGGCCAGGTAGTAAATATTTTAGATTTCACATTTCGGAACAGAAGTTaGTCAGAACCAATGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: DWQTFPPTGQVVNILDFTFRNRS*SEPMFI Trigger: AATGAACATTGGTTCTGACAAACTTCTGTTCCGAAA...TGTGAAATCTAAAATATTTACTACCTGGCCTGTTGGAGGAAAGGTTTGCCAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000588210.1 |
||
| CDS CCA 72 bp | CATCGCCTTCGCCAGGGGCTATCGCGGCCACTTCGCTaGGCGCCGCCATCTTGGGGTCAGGGTCCTGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HRLRQGLSRPLR*APPSWGQGPAS Trigger: GCTTGCAGGACCCTGACCCCAAGATGGCGGCGCCCAGCGAAGTGGCCGCGATAGCCCCTGGCGAAGGCGATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000457422.6 |
||
| CDS GCA 72 bp | GATGTAGGCTCCATAAACGGCTCGGTCCACTCCCAGTaGCTCCAACCGTCCGTCCAGCCAGGAGCCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DVGSINGSVHSQ*LQPSVQPGAKA Trigger: GGCTTTGGCTCCTGGCTGGACGGACGGTTGGAGGCACTGGGAGTGGACCGAGCCGTTTATGGAGCCTACATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 ENST00000588687.5 ENST00000592333.1 |
||
| CDS TCA 72 bp | GTCCTGTTCCTTCTTCCTTTGGGATTCATCCCGAAGTaGGTCTCGCTCCAGTTTTCGGGCATTAAGGACATC | + |
|
Preference number: 6 (lower is better) Translates to: VLFLLPLGFIPK*VSLQFSGIKDI Trigger: GATGTCCTTAATGCCCGAAAACTGGAGCGAGACTCACTTCGGGATGAATCCCAAAGGAAGAAGGAACAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 |
||
| CDS TCA 72 bp | CCAAAGGTCACTGTAAACCCACAAATATGTCTGGCTTaGGCTTTAGGGAATGGTGCCGAGACTCCAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PKVTVNPQICLA*ALGNGAETPER Trigger: CCTTTCTGGAGTCTCGGCACCATTCCCTAAAGCTCAAGCCAGACATATTTGTGGGTTTACAGTGACCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592333.1 |
||
| CDS CAA 72 bp | GCCAAAGGTCACTGTAAACCCACAAATATGTCTGGCTaGAGCTTTAGGGAATGGTGCCGAGACTCCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AKGHCKPTNMSG*SFREWCRDSRK Trigger: CTTTCTGGAGTCTCGGCACCATTCCCTAAAGCTCAAGCCAGACATATTTGTGGGTTTACAGTGACCTTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592333.1 |
||
| CDS GCA 72 bp | TCTGACACCATCCTTGGCTTTACTACGATTTGTGCCTaGTTCTCAATTAGGGTGGCAATGGCCTGTACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SDTILGFTTICA*FSIRVAMACTS Trigger: TGAAGTACAGGCCATTGCCACCCTAATTGAGAAGCAGGCACAAATCGTAGTAAAGCCAAGGATGGTGTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000315286.13 ENST00000457422.6 ENST00000588210.1 ENST00000592333.1 |
||
| CDS GCA 72 bp | CCCACAAATATGTCTGGCTTGAGCTTTAGGGAATGGTaGCGAGACTCCAGAAAGGATATTCCTCTTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PTNMSGLSFREW*RDSRKDIPLHL Trigger: CAGATGAAGAGGAATATCCTTTCTGGAGTCTCGGCACCATTCCCTAAAGCTCAAGCCAGACATATTTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592333.1 |
||
| CDS CAA 72 bp | CGCTCCAGTTTTCGGGCATTAAGGACATCTTCCACATaGGTGTTTCGGAACAGAATCCTCTTCATCTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSSFRALRTSST*VFRNRILFICH Trigger: GTGACAGATGAAGAGGATTCTGTTCCGAAACACCAATGTGGAAGATGTCCTTAATGCCCGAAAACTGGAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457422.6 |
||
| CDS CAA 72 bp | CGCTCCAGTTTTCGGGCATTAAGGACATCTTCCACATaGGTGTTTCGGAACAGAAGTTTGTCAGAACCAATG | + |
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Preference number: 6 (lower is better) Translates to: RSSFRALRTSST*VFRNRSLSEPM Trigger: CATTGGTTCTGACAAACTTCTGTTCCGAAACACCAATGTGGAAGATGTCCTTAATGCCCGAAAACTGGAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315286.13 ENST00000588210.1 |
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| CDS CAA 90 bp | AACGTCTTCGGAGTTCTCTTCTTCATGCCAGTATCTCTACTGCTCTaGATAGACACTTGGAGTCTATTCACATTGTACAGTCACGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: NVFGVLFFMPVSLLL*IDTWSLFTLYSHVE Trigger: TTCTACGTGACTGTACAATGTGAATAGACTCCAAGTGTCTATCAAGAGCAGTAGAGATACTGGCATGAAGAAGAGAACTCCGAAGACGTT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588687.5 |
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| CDS CCA 72 bp | TTCATGCCAGTATCTCTACTGCTCTTGATAGACACTTaGAGTCTATTCACATTGTACAGTCACGTAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: FMPVSLLLLIDT*SLFTLYSHVER Trigger: CCTTTCTACGTGACTGTACAATGTGAATAGACTCCAAGTGTCTATCAAGAGCAGTAGAGATACTGGCATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588687.5 |
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| CDS CAA 72 bp | CTTCATGCCAGTATCTCTACTGCTCTTGATAGACACTaGGAGTCTATTCACATTGTACAGTCACGTAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LHASISTALDRH*ESIHIVQSRRK Trigger: CTTTCTACGTGACTGTACAATGTGAATAGACTCCAAGTGTCTATCAAGAGCAGTAGAGATACTGGCATGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588687.5 |
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| CDS CAA 72 bp | GGAGTTCTCTTCTTCATGCCAGTATCTCTACTGCTCTaGATAGACACTTGGAGTCTATTCACATTGTACAGT | + |
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Preference number: 6 (lower is better) Translates to: GVLFFMPVSLLL*IDTWSLFTLYS Trigger: ACTGTACAATGTGAATAGACTCCAAGTGTCTATCAAGAGCAGTAGAGATACTGGCATGAAGAAGAGAACTCC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588687.5 |
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| CDS CAA 90 bp | CCAGTATCTCTACTGCTCTTGATAGACACTTGGAGTCTATTCACATaGTACAGTCACGTAGAAAGGATGAAATTGTTAATGCTTCCAATC | + |
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Preference number: 6 (lower is better) Translates to: PVSLLLLIDTWSLFT*YSHVERMKLLMLPI Trigger: GATTGGAAGCATTAACAATTTCATCCTTTCTACGTGACTGTACAATGTGAATAGACTCCAAGTGTCTATCAAGAGCAGTAGAGATACTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588687.5 |
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| CDS CAA 90 bp | AGTTCTCTTCTTCATGCCAGTATCTCTACTGCTCTTGATAGACACTaGGAGTCTATTCACATTGTACAGTCACGTAGAAAGGATGAAATT | + |
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Preference number: 6 (lower is better) Translates to: SSLLHASISTALDRH*ESIHIVQSRRKDEI Trigger: AATTTCATCCTTTCTACGTGACTGTACAATGTGAATAGACTCCAAGTGTCTATCAAGAGCAGTAGAGATACTGGCATGAAGAAGAGAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588687.5 |
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| CDS CAA 72 bp | CTACTGCTCTTGATAGACACTTGGAGTCTATTCACATaGTACAGTCACGTAGAAAGGATGAAATTGTTAATG | + |
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Preference number: 6 (lower is better) Translates to: LLLLIDTWSLFT*YSHVERMKLLM Trigger: CATTAACAATTTCATCCTTTCTACGTGACTGTACAATGTGAATAGACTCCAAGTGTCTATCAAGAGCAGTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588687.5 |
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