RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC42 (Homo sapiens)

Ensembl gene IDs: ENSG00000161973

Ensembl transcript IDs: ENST00000293845.8, ENST00000539522.2, ENST00000581598.1

Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAGCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTaGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAG +
Preference number: 1 (lower is better)
Translates to: LSRKAQQASVPSWTD*TAGSRLLLSRSLSQ
Trigger: CTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
3UTR TCA 72 bp CAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTaGCTGGACCGCAGGCTCACGACTTCTTCTTTCACG +
Preference number: 3 (lower is better)
Translates to: QEGTAGIGPELD*LDRRLTTSSFT
Trigger: CGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
3UTR CCA 72 bp AAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTaGACCGCAGGCTCACGACTTCTTCTTTCACGATCT +
Preference number: 3 (lower is better)
Translates to: KAQQASVPSWTD*TAGSRLLLSRS
Trigger: AGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp AAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGATTGGCGCTCAGCCGCTaGTGCTCCAGCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KAQQASVPSWTDWTAGSRLALSR*CSSRSA
Trigger: GGCGCTGCGGCTGGAGCACCAGCGGCTGAGCGCCAA...TCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTGCGCCAGCCGGGCCTTaGCGCGCTCAATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AQQASVPSWTDWTAGSRLAPAGP*RAQSSP
Trigger: AGGAGAAGATTGAGCGCGCCAAGGCCCGGCTGGCGC...AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CCA 90 bp AAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGAGCATCGGTCCCGAGCTaGACTGACTGGACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: KAQQASVPSWTDWTAGSRASVPS*TDWTAG
Trigger: GCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGC...TCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp CACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCCCTGCGCAGACTGCATaGGGTCGTGGCGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: HSRHRSRAGLTGPQAHDFPAQTA*GRGACS
Trigger: TGAGCATGCGCCACGACCTCATGCAGTCTGCGCAGG...GAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR GCA 90 bp CACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCAGCGCCACCATCTCCTaGTTGCGCTTGGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSRHRSRAGLTGPQAHDFSATIS*LRLVSS
Trigger: GGAGCTGACCAAGCGCAAGCAGGAGATGGTGGCGCT...GAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp GCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTTTCTCCTGGCCTTCCTaGGCAGACTGCATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: AGRHSRHRSRAGLTGPQAFSWPS*ADCMRS
Trigger: CGACCTCATGCAGTCTGCGCAGGAAGGCCAGGAGAA...AGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR GCA 90 bp GCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTGTGGGTGTCCTCCAGTaGCACCTCAGTCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: AGRHSRHRSRAGLTGPQAVGVLQ*HLSHLL
Trigger: AAGGAGGTGACTGAGGTGGCACTGGAGGACACCCAC...AGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp GGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGTGGGTGTCCTCCAGTaGCACCTCAGTCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: GRHSRHRSRAGLTGPQAHVGVLQ*HLSHLL
Trigger: AAGGAGGTGACTGAGGTGGCACTGGAGGACACCCAC...GTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp GGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGGTCTTCCTCTTCCATaGTGCCCAGACTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: GRHSRHRSRAGLTGPQAHGLPLP*CPDSWW
Trigger: CCACCATGAGTCTGGGCATCATGGAAGAGGAAGACC...GTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp AGCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCGGTCTTCCTCTTCCATaGTGCCCAGACTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SRKAQQASVPSWTDWTAGGLPLP*CPDSWW
Trigger: CCACCATGAGTCTGGGCATCATGGAAGAGGAAGACC...GCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp CAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTAGCCGCTCCCCATACTaGAGCCGGAAGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: QASVPSWTDWTAGSRLLLSRSPY*SRKYSA
Trigger: GGCCGAGTACTTCCGGCTGCAGTATGGGGAGCGGCT...AAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGCGCGGATCCGTTTCTaGTCGTTCTCCTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: GRHSRHRSRAGLTGPQAHARIRF*SFSWMN
Trigger: GTTCATCCAGGAGAACGACCAGAAACGGATCCGCGC...GTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCAGTAGTCCTTCAGCTTaGCGCTCAGCCGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: HSRHRSRAGLTGPQAHDFSSPSA*RSAAGA
Trigger: AGCACCAGCGGCTGAGCGCCAAGCTGAAGGACTACT...GAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTTTGGCTGCGGTGTTCTaGATGTGCGCCCAGCGAGAT +
Preference number: 4 (lower is better)
Translates to: AQQASVPSWTDWTAGSRLLAAVF*MCAQRD
Trigger: ATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAA...AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGCAGGAGGGTCTTCTTaGCTGCGGTGTTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GRHSRHRSRAGLTGPQAHAGGSS*LRCSGC
Trigger: ACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGC...GTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGCATCGGTCCCGAGCTaGACTGACTGGACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: HRSRAGLTGPQAHDFFFHASVPS*TDWTAG
Trigger: GCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGC...GTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp GCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTACAGGGTCCCACAGATaGTGGAGTTTGAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: AGRHSRHRSRAGLTGPQATGSHR*WSLRLH
Trigger: GTGGAGTCTCAAACTCCATCATCTGTGGGACCCTGT...AGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp GGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACACAGGGTCCCACAGATaGTGGAGTTTGAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: GRHSRHRSRAGLTGPQAHTGSHR*WSLRLH
Trigger: GTGGAGTCTCAAACTCCATCATCTGTGGGACCCTGT...GTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp TTCAGGGATAGAGTGAGGCCCACGGGGGAAAATAAGCAGGTGTCCCTCAGCAGGGACTCATGGTGGCAGTaGCCTCACGGCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FRDRVRPTGENKQVSLSRDSWWQ*PHGPGS
Trigger: GCTGCCTGGGCCGTGAGGTCACTGCCACCATGAGTC...CCTGCTGAGGGACACCTGCTTATTTTCCCCCGTGGGCCTCACTCTATCCCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp CACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCGAGATTCCCAGAAGATaGCATTGCTGCGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: HSRHRSRAGLTGPQAHDFEIPRR*HCCGHG
Trigger: ACCGTGCCCGCAGCAATGTCATCTTCTGGGAATCTC...GAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR GCA 90 bp GCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTGTCAGCTCCTGCATGTaGTGGCACTTGAGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: AQQASVPSWTDWTAGSRLVSSCM*WHLSSR
Trigger: GCGAGAACTCAAGTGCCAGCACATGCAGGAGCTGAC...AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp GACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAGCGCTCAGCCGCTGGTaGTCCAGCCGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: DRRLTTSSFTISVSGHSGALSRW*SSRSAT
Trigger: GGTGGCGCTGCGGCTGGAGCACCAGCGGCTGAGCGC...TCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp GGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGTCACCTCCTTCAGGTaGTTGCTCACGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GRHSRHRSRAGLTGPQAHVTSFR*LLTIWK
Trigger: CTTCCAGATCGTGAGCAAGCACCTGAAGGAGGTGAC...GTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp GGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACTGGATCATGTCCAGCTaGTTGTGGGTGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GRHSRHRSRAGLTGPQAHWIMSS*LWVSSS
Trigger: ACTGGAGGACACCCACAAGCAGCTGGACATGATCCA...GTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp AAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGAGCGCGGATCCGTTTCTaGTCGTTCTCCTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: KAQQASVPSWTDWTAGSRARIRF*SFSWMN
Trigger: GTTCATCCAGGAGAACGACCAGAAACGGATCCGCGC...TCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp AAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGAAGCTCCTGCATGTGCTaGCACTTGAGTTCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: KAQQASVPSWTDWTAGSRSSCMC*HLSSRS
Trigger: GGAGCGAGAACTCAAGTGCCAGCACATGCAGGAGCT...TCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTCCGAGCTGGACTGACTaGACCGCAGGCTCACGACTT +
Preference number: 4 (lower is better)
Translates to: QASVPSWTDWTAGSRLLLPSWTD*TAGSRL
Trigger: AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGG...AAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp CAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTCGGCTCAGGACGATGTaGTGGGGCAGTTATGGGAGA +
Preference number: 4 (lower is better)
Translates to: QASVPSWTDWTAGSRLLLRLRTM*WGSYGR
Trigger: TCTCCCATAACTGCCCCAGCACATCGTCCTGAGCCG...AAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR GCA 90 bp GTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTAGCCGCTCCCCATACTaGAGCCGGAAGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: VPSWTDWTAGSRLLLSRSSRSPY*SRKYSA
Trigger: GGCCGAGTACTTCCGGCTGCAGTATGGGGAGCGGCT...AGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp CACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCCCTCCTTCAGGTGCTTaGTCACGATCTGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: HSRHRSRAGLTGPQAHDFPPSGA*SRSGRG
Trigger: ACCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGG...GAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTCAGGACGATGTGCTaGGGCAGTTATGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: AQQASVPSWTDWTAGSRLLRTMC*GSYGRC
Trigger: ACATCTCCCATAACTGCCCCAGCACATCGTCCTGAG...AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CCA 90 bp GCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCATCCACAGAAGGTGGCTaGAGACAGGTTGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: ASVPSWTDWTAGSRLLLSSTEGG*RQVGRL
Trigger: GAGCCGCCCAACCTGTCTCCAGCCACCTTCTGTGGA...TGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CCA 90 bp TCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCCAGTAGCCAGATaGATGGGGACTCCGACGCCC +
Preference number: 4 (lower is better)
Translates to: SVPSWTDWTAGSRLLLSRSPVAR*MGTPTP
Trigger: GGGCGTCGGAGTCCCCATCCATCTGGCTACTGGAGA...TCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp AAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGAGTTCTCGCTCCTTGTTaGCTTTCTTCATGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: KAQQASVPSWTDWTAGSRVLAPC*LSSWRG
Trigger: TCCGCGCCATGAAGAAAGCCAACAAGGAGCGAGAAC...TCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCCGTGCAATCACCTCATaGATCTCCTCGAACTCGGAG +
Preference number: 4 (lower is better)
Translates to: HSRHRSRAGLTGPQAHDFRAITS*ISSNSE
Trigger: CTCCGAGTTCGAGGAGATCCATGAGGTGATTGCACG...GAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CCA 90 bp CATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGACTGCATGAGGTCGTaGCGCATGCTCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: HRSRAGLTGPQAHDFFFHDCMRS*RMLTSV
Trigger: GACGCTGGTGAGCATGCGCCACGACCTCATGCAGTC...GTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR TCA 90 bp CTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACAGACTCATGGTGGCAGTaGCCTCACGGCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LTGPQAHDFFFHDLCLRTDSWWQ*PHGPGS
Trigger: GCTGCCTGGGCCGTGAGGTCACTGCCACCATGAGTC...TGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp GACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAGGTCCCGAGCTGGACTaGCTGGACCGCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: DRRLTTSSFTISVSGHSGGPELD*LDRRLT
Trigger: CGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACC...TCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCTCCTGCTTGCGCTTaGTCAGCTCCTGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: QASVPSWTDWTAGSRLLLSPACA*SAPACA
Trigger: AGCACATGCAGGAGCTGACCAAGCGCAAGCAGGAGA...AAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTTGGCGCTCAGCCGCTaGTGCTCCAGCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GSRLLLSRSLSQDILEQGLALSR*CSSRSA
Trigger: GGCGCTGCGGCTGGAGCACCAGCGGCTGAGCGCCAA...GCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp GCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACACGGCCCAGGCAGCTaGCTCTTCACAGTGAAATTG +
Preference number: 4 (lower is better)
Translates to: ASVPSWTDWTAGSRLLLSHGPGS*LFTVKL
Trigger: CAATTTCACTGTGAAGAGTCAGCTGCCTGGGCCGTG...TGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp AGCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCGTTTCCATTCTGCGCTaGAACATCTTCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SRKAQQASVPSWTDWTAGVSILR*NIFFFC
Trigger: GCAGAAGAAGAAGATGTTTCAGCGCAGAATGGAAAC...GCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp GGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCGGTCCCGAGCTGGACTaGCTGGACCGCAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: GSRLLLSRSLSQDILEQGGPELD*LDRRLT
Trigger: CGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACC...GCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp TTCAGGGATAGAGTGAGGCCCACGGGGGAAAATAAGCAGGTGTCCCTCAGCAGGGAGGGTCTTCTTGGCTaGGGTGTTCTGGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: FRDRVRPTGENKQVSLSREGLLG*GVLDVR
Trigger: GCGCACATCCAGAACACCGCAGCCAAGAAGACCCTC...CCTGCTGAGGGACACCTGCTTATTTTCCCCCGTGGGCCTCACTCTATCCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp CAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTCTTCTTTTTCACCTCTaGCCAGATGTCCGACCGGTC +
Preference number: 4 (lower is better)
Translates to: QASVPSWTDWTAGSRLLLLLFHL*PDVRPV
Trigger: GACCGGTCGGACATCTGGGCAGAGGTGAAAAAGAAG...AAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp CACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCATTCTGGAACAAGGCTaGCTCCTTAAATCCGGACTC +
Preference number: 4 (lower is better)
Translates to: HSRHRSRAGLTGPQAHDFILEQG*LLKSGL
Trigger: GAGTCCGGATTTAAGGAGGCAGCCTTGTTCCAGAAT...GAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACTCTCCTGCTTGCGCTTaGTCAGCTCCTGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: HRSRAGLTGPQAHDFFFHSPACA*SAPACA
Trigger: AGCACATGCAGGAGCTGACCAAGCGCAAGCAGGAGA...GTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACTGCTTGCTCACGATCTaGAAGAGGTTCAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: HRSRAGLTGPQAHDFFFHCLLTI*KRFSVA
Trigger: GGCCACGCTGAACCTCTTCCAGATCGTGAGCAAGCA...GTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp AGCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCATGTCCGACCGGTCTTaGATAAATTGCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: SRKAQQASVPSWTDWTAGMSDRS*INCWIM
Trigger: CATGATCCAGCAATTTATCCAAGACCGGTCGGACAT...GCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp GCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCAGGTCGTTCTCCTGGATaGACTGCTCAGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ASVPSWTDWTAGSRLLLSGRSPG*TAQTSG
Trigger: TCCAGAAGTCTGAGCAGTTCATCCAGGAGAACGACC...TGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp TTCAGGGATAGAGTGAGGCCCACGGGGGAAAATAAGCAGGTGTCCCTCAGCAGGGCATGTGCTGGCACTTaGGTTCTCGCTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FRDRVRPTGENKQVSLSRACAGT*VLAPCW
Trigger: CCAACAAGGAGCGAGAACTCAAGTGCCAGCACATGC...CCTGCTGAGGGACACCTGCTTATTTTCCCCCGTGGGCCTCACTCTATCCCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp CTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACAAGCGCCACCATCTCCTaGTTGCGCTTGGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LTGPQAHDFFFHDLCLRTSATIS*LRLVSS
Trigger: GGAGCTGACCAAGCGCAAGCAGGAGATGGTGGCGCT...TGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp CATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACCCTCCTTCAGGTGCTTaGTCACGATCTGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: HRSRAGLTGPQAHDFFFHPPSGA*SRSGRG
Trigger: ACCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGG...GTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp CATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACCTTCTTTTTCACCTCTaGCCAGATGTCCGACCGGTC +
Preference number: 4 (lower is better)
Translates to: HRSRAGLTGPQAHDFFFHLLFHL*PDVRPV
Trigger: GACCGGTCGGACATCTGGGCAGAGGTGAAAAAGAAG...GTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCAACGCCCCCTCAACATTaGGGAGTTTCTGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: ASVPSWTDWTAGSRLLLSTPPQH*GVSGAS
Trigger: AGATGCTCCAGAAACTCCCCAATGTTGAGGGGGCGT...TGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp TTCAGGGATAGAGTGAGGCCCACGGGGGAAAATAAGCAGGTGTCCCTCAGCAGGGCAGGAGGGTCTTCTTaGCTGCGGTGTTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: FRDRVRPTGENKQVSLSRAGGSS*LRCSGC
Trigger: ACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGC...CCTGCTGAGGGACACCTGCTTATTTTCCCCCGTGGGCCTCACTCTATCCCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACTCTTGGATAAATTGCTaGATCATGTCCAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GRHSRHRSRAGLTGPQAHSWINC*IMSSCL
Trigger: CAAGCAGCTGGACATGATCCAGCAATTTATCCAAGA...GTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp GCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCAACAGATGATGGAGTTTaGGACTCCACAGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASVPSWTDWTAGSRLLLSTDDGV*DSTEGG
Trigger: GCCACCTTCTGTGGAGTCTCAAACTCCATCATCTGT...TGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp CACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTGCACCATAGTTTaGTGCATGATTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: HSRHRSRAGLTGPQAHDFFCTIV*CMISVS
Trigger: GGAGACAGAAATCATGCATCAAACTATGGTGCAGAA...GAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp TTCAGGGATAGAGTGAGGCCCACGGGGGAAAATAAGCAGGTGTCCCTCAGCAGGTCAGACTTCTGGATGTaGGCCTTCAGTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FRDRVRPTGENKQVSLSRSDFWM*AFSWAS
Trigger: GGAAGCCCAACTGAAGGCTCACATCCAGAAGTCTGA...CCTGCTGAGGGACACCTGCTTATTTTCCCCCGTGGGCCTCACTCTATCCCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp AGCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCTCTAGGTACTTGTTaGAGATGTAGTAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SRKAQQASVPSWTDWTAGSLGTC*RCSSPS
Trigger: TGAAGGACTACTACATCTTCAACAAGTACCTAGAGA...GCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp TTCAGGGATAGAGTGAGGCCCACGGGGGAAAATAAGCAGGTGTCCCTCAGCAGGGTCACCTCCTTCAGGTaGTTGCTCACGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FRDRVRPTGENKQVSLSRVTSFR*LLTIWK
Trigger: CTTCCAGATCGTGAGCAAGCACCTGAAGGAGGTGAC...CCTGCTGAGGGACACCTGCTTATTTTCCCCCGTGGGCCTCACTCTATCCCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp GTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTTGGATCATGTCCAGCTaGTTGTGGGTGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VPSWTDWTAGSRLLLSRSWIMSS*LWVSSS
Trigger: ACTGGAGGACACCCACAAGCAGCTGGACATGATCCA...AGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTTCACAGTGAAATTGTaGGTAGCAGAGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: QASVPSWTDWTAGSRLLLFTVKL*VAEPQV
Trigger: CACCTGTGGCTCTGCTACCCACAATTTCACTGTGAA...AAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTACGCCCCCTCAACATTaGGGAGTTTCTGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: VPSWTDWTAGSRLLLSRSTPPQH*GVSGAS
Trigger: AGATGCTCCAGAAACTCCCCAATGTTGAGGGGGCGT...AGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTGTCTCAGGACATTCTaGAACAAGGCTGCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: QASVPSWTDWTAGSRLLLCLRTF*NKAASL
Trigger: TAAGGAGGCAGCCTTGTTCCAGAATGTCCTGAGACA...AAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp ACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACCTTCCTGCGCAGACTaGATGAGGTCGTGGCGCATG +
Preference number: 4 (lower is better)
Translates to: TAGSRLLLSRSLSQDILEPSCAD*MRSWRM
Trigger: CATGCGCCACGACCTCATGCAGTCTGCGCAGGAAGG...TTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR GCA 90 bp GCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTAGCTCATTGTTTTGCTaGAGGATCTCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: AQQASVPSWTDWTAGSRLSSLFC*RISSSF
Trigger: AAAGGATGATGAGATCCTGCAGCAAAACAATGAGCT...AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR GCA 90 bp CATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGCCAGCTCATTGTTTTaGTGCAGGATCTCATCATCC +
Preference number: 4 (lower is better)
Translates to: HRSRAGLTGPQAHDFFFHASSLF*CRISSS
Trigger: GGATGATGAGATCCTGCAGCAAAACAATGAGCTGGC...GTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR GCA 90 bp CTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGAGGGTCTTCTTGGCTaGGGTGTTCTGGATGTGCGC +
Preference number: 4 (lower is better)
Translates to: LDRRLTTSSFTISVSGHSEGLLG*GVLDVR
Trigger: GCGCACATCCAGAACACCGCAGCCAAGAAGACCCTC...AGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp GCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGGTCTTGGATAAATTaGTGGATCATGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASVPSWTDWTAGSRLLLSRSWIN*WIMSSC
Trigger: GCAGCTGGACATGATCCAGCAATTTATCCAAGACCG...TGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACAACATTGGGGAGTTTCTaGAGCATCTGCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LTGPQAHDFFFHDLCLRTTLGSF*SICSSR
Trigger: GCGGCTGCTGCAGATGCTCCAGAAACTCCCCAATGT...TGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCTCTCCAGTAGCCAGATaGATGGGGACTCCGACGCCC +
Preference number: 4 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLSPVAR*MGTPTP
Trigger: GGGCGTCGGAGTCCCCATCCATCTGGCTACTGGAGA...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGACGCTCAATCTTCTCCTaGCCTTCCTGCGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: DRRLTTSSFTISVSGHSGRSIFS*PSCADC
Trigger: GCAGTCTGCGCAGGAAGGCCAGGAGAAGATTGAGCG...TCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CCA 90 bp GGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCCCGAGCTGGACTGACTaGACCGCAGGCTCACGACTT +
Preference number: 4 (lower is better)
Translates to: GSRLLLSRSLSQDILEQGPSWTD*TAGSRL
Trigger: AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGG...GCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp CTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGCATGTGCTGGCACTTaGGTTCTCGCTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LDRRLTTSSFTISVSGHSACAGT*VLAPCW
Trigger: CCAACAAGGAGCGAGAACTCAAGTGCCAGCACATGC...AGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp AGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGTGGCTGGAGACAGGTTaGGCGGCTCAGGACGATGTG +
Preference number: 4 (lower is better)
Translates to: RLTTSSFTISVSGHSGTRWLETG*AAQDDV
Trigger: CACATCGTCCTGAGCCGCCCAACCTGTCTCCAGCCA...CCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CCA 90 bp GACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACATTGGGGAGTTTCTaGAGCATCTGCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: DRRLTTSSFTISVSGHSGTLGSF*SICSSR
Trigger: GCGGCTGCTGCAGATGCTCCAGAAACTCCCCAATGT...TCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTTTCTGGTCGTTCTCCTaGATGAACTGCTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: VPSWTDWTAGSRLLLSRSFWSFS*MNCSDF
Trigger: GAAGTCTGAGCAGTTCATCCAGGAGAACGACCAGAA...AGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp TTCAGGGATAGAGTGAGGCCCACGGGGGAAAATAAGCAGGTGTCCCTCAGCAGGTTCTGGTCGTTCTCCTaGATGAACTGCTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: FRDRVRPTGENKQVSLSRFWSFS*MNCSDF
Trigger: GAAGTCTGAGCAGTTCATCCAGGAGAACGACCAGAA...CCTGCTGAGGGACACCTGCTTATTTTCCCCCGTGGGCCTCACTCTATCCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCAGTAGTCCTTCAGCTTaGCGCTCAGCCGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLSSPSA*RSAAGA
Trigger: AGCACCAGCGGCTGAGCGCCAAGCTGAAGGACTACT...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp ACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAATTGGCTGCGGTGTTCTaGATGTGCGCCCAGCGAGAT +
Preference number: 4 (lower is better)
Translates to: TAGSRLLLSRSLSQDILELAAVF*MCAQRD
Trigger: ATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAA...TTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCAATGTCCGACCGGTCTTaGATAAATTGCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: ASVPSWTDWTAGSRLLLSMSDRS*INCWIM
Trigger: CATGATCCAGCAATTTATCCAAGACCGGTCGGACAT...TGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp GACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGATCAGACTTCTGGATGTaGGCCTTCAGTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: DRRLTTSSFTISVSGHSGSDFWM*AFSWAS
Trigger: GGAAGCCCAACTGAAGGCTCACATCCAGAAGTCTGA...TCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCCGCTTGGTCAGCTCCTaGATGTGCTGGCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLRLVSS*MCWHLS
Trigger: ACTCAAGTGCCAGCACATGCAGGAGCTGACCAAGCG...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp GGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCCGGTCAAAGCGCATCTaGAGCCTTGCCAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GSRLLLSRSLSQDILEQGRSKRI*SLASSL
Trigger: CAATGAGCTGGCAAGGCTGCAGATGCGCTTTGACCG...GCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CCA 90 bp CTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATGTTGGCTTTCTTCATaGCGCGGATCCGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LTGPQAHDFFFHDLCLRTCWLSS*RGSVSG
Trigger: ACCAGAAACGGATCCGCGCCATGAAGAAAGCCAACA...TGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCAGCTCCTGCATGTGCTaGCACTTGAGTTCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: HDFFFHDLCLRTFWNKAASSCMC*HLSSRS
Trigger: GGAGCGAGAACTCAAGTGCCAGCACATGCAGGAGCT...GGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCTGCTTGCTCACGATCTaGAAGAGGTTCAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLCLLTI*KRFSVA
Trigger: GGCCACGCTGAACCTCTTCCAGATCGTGAGCAAGCA...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCGGTCGTTCTCCTGGATaGACTGCTCAGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLGRSPG*TAQTSG
Trigger: TCCAGAAGTCTGAGCAGTTCATCCAGGAGAACGACC...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCGTGCTGGGGCAGTTATaGGAGATGTGGTTACCTAGC +
Preference number: 4 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLVLGQL*EMWLPS
Trigger: GCTAGGTAACCACATCTCCCATAACTGCCCCAGCAC...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CCA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCGTTCTCGCTCCTTGTTaGCTTTCTTCATGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLVLAPC*LSSWRG
Trigger: TCCGCGCCATGAAGAAAGCCAACAAGGAGCGAGAAC...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCACAGATGATGGAGTTTaGGACTCCACAGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLTDDGV*DSTEGG
Trigger: GCCACCTTCTGTGGAGTCTCAAACTCCATCATCTGT...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCTGTTGGCTTTCTTCATaGCGCGGATCCGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLCWLSS*RGSVSG
Trigger: ACCAGAAACGGATCCGCGCCATGAAGAAAGCCAACA...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR GCA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCATTCTGGAACAAGGCTaGCTCCTTAAATCCGGACTC +
Preference number: 4 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLILEQG*LLKSGL
Trigger: GAGTCCGGATTTAAGGAGGCAGCCTTGTTCCAGAAT...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp GGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGTCTCAGGACATTCTaGAACAAGGCTGCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: GSRLLLSRSLSQDILEQGCLRTF*NKAASL
Trigger: TAAGGAGGCAGCCTTGTTCCAGAATGTCCTGAGACA...GCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp CTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTTTCTGCACCATAGTTTaGTGCATGATTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LDRRLTTSSFTISVSGHSFCTIV*CMISVS
Trigger: GGAGACAGAAATCATGCATCAAACTATGGTGCAGAA...AGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp CTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATCTCTAGGTACTTGTTaGAGATGTAGTAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LTGPQAHDFFFHDLCLRTSLGTC*RCSSPS
Trigger: TGAAGGACTACTACATCTTCAACAAGTACCTAGAGA...TGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CCA 90 bp CTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTTCTTGGATAAATTGCTaGATCATGTCCAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LDRRLTTSSFTISVSGHSSWINC*IMSSCL
Trigger: CAAGCAGCTGGACATGATCCAGCAATTTATCCAAGA...AGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR TCA 90 bp AGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGGTTTCCATTCTGCGCTaGAACATCTTCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLTTSSFTISVSGHSGTRVSILR*NIFFFC
Trigger: GCAGAAGAAGAAGATGTTTCAGCGCAGAATGGAAAC...CCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 90 bp CGCGCCAGCCGGGCCTTGGCGCGCTCAATCTTCTCCTGGCCTTCCTaGGCAGACTGCATGAGGTCGTGGCGCATGCTCACCAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: RASRALARSIFSWPS*ADCMRSWRMLTSVL
Trigger: CAAGACGCTGGTGAGCATGCGCCACGACCTCATGCAGTCTGCGCAGGAAGGCCAGGAGAAGATTGAGCGCGCCAAGGCCCGGCTGGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS GCA 90 bp TTGGCGCTCAGCCGCTGGTGCTCCAGCCGCAGCGCCACCATCTCCTaGTTGCGCTTGGTCAGCTCCTGCATGTGCTGGCACTTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LALSRWCSSRSATIS*LRLVSSCMCWHLSS
Trigger: AGAACTCAAGTGCCAGCACATGCAGGAGCTGACCAAGCGCAAGCAGGAGATGGTGGCGCTGCGGCTGGAGCACCAGCGGCTGAGCGCCAA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp GGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACATCTCCTGCTTGCGCTaGGTCAGCTCCTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: GRHSRHRSRAGLTGPQAHISCLR*VSSCMC
Trigger: GCACATGCAGGAGCTGACCAAGCGCAAGCAGGAGAT...GTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp GCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTAGTTCTCGCTCCTTGTaGGCTTTCTTCATGGCGCGG +
Preference number: 5 (lower is better)
Translates to: AGRHSRHRSRAGLTGPQASSRSL*AFFMAR
Trigger: CCGCGCCATGAAGAAAGCCAACAAGGAGCGAGAACT...AGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp TCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGAGTGGCTGGAGACAGGTaGGGCGGCTCAGGACGATGT +
Preference number: 5 (lower is better)
Translates to: SVPSWTDWTAGSRLLLSRVAGDR*GGSGRC
Trigger: ACATCGTCCTGAGCCGCCCAACCTGTCTCCAGCCAC...TCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS TCA 90 bp CCTTGGCGCGCTCAATCTTCTCCTGGCCTTCCTGCGCAGACTGCATaGGGTCGTGGCGCATGCTCACCAGCGTCTTGTAGCGTGCAATCA +
Preference number: 5 (lower is better)
Translates to: PWRAQSSPGLPAQTA*GRGACSPASCSVQS
Trigger: TGATTGCACGCTACAAGACGCTGGTGAGCATGCGCCACGACCTCATGCAGTCTGCGCAGGAAGGCCAGGAGAAGATTGAGCGCGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CAA 90 bp GCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTTTGAGTTCTCGCTCCTaGTTGGCTTTCTTCATGGCG +
Preference number: 5 (lower is better)
Translates to: AGRHSRHRSRAGLTGPQALSSRS*LAFFMA
Trigger: CGCCATGAAGAAAGCCAACAAGGAGCGAGAACTCAA...AGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp CAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTATCTCCTGCTTGCGCTaGGTCAGCTCCTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: QASVPSWTDWTAGSRLLLISCLR*VSSCMC
Trigger: GCACATGCAGGAGCTGACCAAGCGCAAGCAGGAGAT...AAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp CTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTCGCGCCAGCCGGGCCTaGGCGCGCTCAATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LDRRLTTSSFTISVSGHSRASRA*ARSIFS
Trigger: GGAGAAGATTGAGCGCGCCAAGGCCCGGCTGGCGCG...AGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CAA 90 bp GCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTAGCGCATCTGCAGCCTaGCCAGCTCATTGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: AQQASVPSWTDWTAGSRLSASAA*PAHCFA
Trigger: AGCAAAACAATGAGCTGGCAAGGCTGCAGATGCGCT...AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CAA 90 bp AGCAGGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCCCGGTCTTGGATAAATaGCTGGATCATGTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SRKAQQASVPSWTDWTAGPVLDK*LDHVQL
Trigger: CAGCTGGACATGATCCAGCAATTTATCCAAGACCGG...GCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 90 bp CAGCGTGGCCATCTTAATGGTGCCAAGCAGGAGGGTCTTCTTGGCTaGGGTGTTCTGGATGTGCGCCCAGCGAGATTCCTCGGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: QRGHLNGAKQEGLLG*GVLDVRPARFLGVL
Trigger: GAGAACTCCGAGGAATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATGGCCACGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539522.2
CDS-3UTR CAA 90 bp GCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCAGACGCCCCCTCAACATaGGGGAGTTTCTGGAGCATC +
Preference number: 5 (lower is better)
Translates to: ASVPSWTDWTAGSRLLLSDAPST*GSFWSI
Trigger: GATGCTCCAGAAACTCCCCAATGTTGAGGGGGCGTC...TGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp GGAAGGCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGATGTCCGACCGGTCTaGGATAAATTGCTGGATCAT +
Preference number: 5 (lower is better)
Translates to: GRHSRHRSRAGLTGPQAHDVRPV*DKLLDH
Trigger: ATGATCCAGCAATTTATCCAAGACCGGTCGGACATC...GTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 90 bp CAGCGTGGCCATCTTAATGGTGCCAAGCAGGAGGGTCTTCTTGGCTaGGGTGTTCTGGATGTGCGCCCAGCGAGATTCCCAGAAGATGAC +
Preference number: 5 (lower is better)
Translates to: QRGHLNGAKQEGLLG*GVLDVRPARFPEDD
Trigger: GTCATCTTCTGGGAATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATGGCCACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS GCA 90 bp CCTTTGCCCTCAGGAACTTCTGGGAAGGCATTAGGCCTGGTTAGATaGTGGTTGCCATGGAGCCCAGGGCCAGAGGCAGTTTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: PLPSGTSGKALGLVR*WLPWSPGPEAVSGE
Trigger: CTCACCAGAAACTGCCTCTGGCCCTGGGCTCCATGGCAACCAGCATCTAACCAGGCCTAATGCCTTCCCAGAAGTTCCTGAGGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581598.1
CDS-3UTR CAA 90 bp GCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTTGCCAGCTCATTGTTTaGCTGCAGGATCTCATCATC +
Preference number: 5 (lower is better)
Translates to: AQQASVPSWTDWTAGSRLCQLIV*LQDLII
Trigger: GATGATGAGATCCTGCAGCAAAACAATGAGCTGGCA...AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CAA 90 bp CATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACTCCCAGAAGATGACATaGCTGCGGGCACGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: HRSRAGLTGPQAHDFFFHSQKMT*LRARSK
Trigger: CTTTGACCGTGCCCGCAGCAATGTCATCTTCTGGGA...GTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CAA 90 bp GCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTAATCCGGACTCGCTGTaGTTCCTTCTTTTTCACCTC +
Preference number: 5 (lower is better)
Translates to: AQQASVPSWTDWTAGSRLNPDSL*FLLFHL
Trigger: GAGGTGAAAAAGAAGGAACAACAGCGAGTCCGGATT...AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CCA 90 bp TCCAGTGCCACCTCAGTCACCTCCTTCAGGTGCTTGCTCACGATCTaGAAGAGGTTCAGCGTGGCCATCTTAATGGTGCCAAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SSATSVTSFRCLLTI*KRFSVAILMVPSRR
Trigger: CCTCCTGCTTGGCACCATTAAGATGGCCACGCTGAACCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGGTGACTGAGGTGGCACTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CCA 90 bp ATCTTAATGGTGCCAAGCAGGAGGGTCTTCTTGGCTGCGGTGTTCTaGATGTGCGCCCAGCGAGATTCCTCGGAGTTCTCCACCACCTTC +
Preference number: 5 (lower is better)
Translates to: ILMVPSRRVFLAAVF*MCAQRDSSEFSTTF
Trigger: GAAGGTGGTGGAGAACTCCGAGGAATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539522.2
CDS CCA 90 bp TTGCCCTCAGGAACTTCTGGGAAGGCATTAGGCCTGGTTAGATGCTaGTTGCCATGGAGCCCAGGGCCAGAGGCAGTTTCTGGTGAGTGT +
Preference number: 5 (lower is better)
Translates to: LPSGTSGKALGLVRC*LPWSPGPEAVSGEC
Trigger: ACACTCACCAGAAACTGCCTCTGGCCCTGGGCTCCATGGCAACCAGCATCTAACCAGGCCTAATGCCTTCCCAGAAGTTCCTGAGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581598.1
CDS-3UTR CAA 90 bp TTCAGGGATAGAGTGAGGCCCACGGGGGAAAATAAGCAGGTGTCCCTCAGCAGGGATGTGAGCCTTCAGTaGGGCTTCCTTAACGCCCAG +
Preference number: 5 (lower is better)
Translates to: FRDRVRPTGENKQVSLSRDVSLQ*GFLNAQ
Trigger: CTGGGCGTTAAGGAAGCCCAACTGAAGGCTCACATC...CCTGCTGAGGGACACCTGCTTATTTTCCCCCGTGGGCCTCACTCTATCCCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp CATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACTGCATGTGCTGGCACTaGAGTTCTCGCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: HRSRAGLTGPQAHDFFFHCMCWH*SSRSLL
Trigger: CAACAAGGAGCGAGAACTCAAGTGCCAGCACATGCA...GTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp TTCAGGGATAGAGTGAGGCCCACGGGGGAAAATAAGCAGGTGTCCCTCAGCAGGACCTCCTTCAGGTGCTaGCTCACGATCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: FRDRVRPTGENKQVSLSRTSFRC*LTIWKR
Trigger: CCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGGT...CCTGCTGAGGGACACCTGCTTATTTTCCCCCGTGGGCCTCACTCTATCCCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS TCA 90 bp CGTTTCTGGTCGTTCTCCTGGATGAACTGCTCAGACTTCTGGATGTaGGCCTTCAGTTGGGCTTCCTTAACGCCCAGTTCCTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: RFWSFSWMNCSDFWM*AFSWASLTPSSSQR
Trigger: GCGCTGGGAGGAACTGGGCGTTAAGGAAGCCCAACTGAAGGCTCACATCCAGAAGTCTGAGCAGTTCATCCAGGAGAACGACCAGAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 90 bp TGCTTGTGGGTGTCCTCCAGTGCCACCTCAGTCACCTCCTTCAGGTaGTTGCTCACGATCTGGAAGAGGTTCAGCGTGGCCATCTTAATG +
Preference number: 5 (lower is better)
Translates to: CLWVSSSATSVTSFR*LLTIWKRFSVAILM
Trigger: CATTAAGATGGCCACGCTGAACCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGGTGACTGAGGTGGCACTGGAGGACACCCACAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CCA 90 bp ATCTTAATGGTGCCAAGCAGGAGGGTCTTCTTGGCTGCGGTGTTCTaGATGTGCGCCCAGCGAGATTCCCAGAAGATGACATTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: ILMVPSRRVFLAAVF*MCAQRDSQKMTLLR
Trigger: CCGCAGCAATGTCATCTTCTGGGAATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CAA 90 bp CTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACAGACGCCCCCTCAACATaGGGGAGTTTCTGGAGCATC +
Preference number: 5 (lower is better)
Translates to: LTGPQAHDFFFHDLCLRTDAPST*GSFWSI
Trigger: GATGCTCCAGAAACTCCCCAATGTTGAGGGGGCGTC...TGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp GCACAGCAGGCATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTGCACCATAGTTaGATGCATGATTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: AQQASVPSWTDWTAGSRLLLHHS*MHDFCL
Trigger: GAGACAGAAATCATGCATCAAACTATGGTGCAGAAG...AAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATGCCTGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp CATCGGTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACTTGAGTTCTCGCTCCTaGTTGGCTTTCTTCATGGCG +
Preference number: 5 (lower is better)
Translates to: HRSRAGLTGPQAHDFFFHLSSRS*LAFFMA
Trigger: CGCCATGAAGAAAGCCAACAAGGAGCGAGAACTCAA...GTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGACCGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp CTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGTGGTGGCTGCACTCTaGTTTCTCCCTTCGGCCTAC +
Preference number: 5 (lower is better)
Translates to: LDRRLTTSSFTISVSGHSVVAAL*FLPSAY
Trigger: GTAGGCCGAAGGGAGAAACAAGAGTGCAGCCACCAC...AGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp CTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTAGCAGGAGGGTCTTCTaGGCTGCGGTGTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: LDRRLTTSSFTISVSGHSSRRVF*AAVFWM
Trigger: CATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCT...AGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS TCA 90 bp TCTCCTCGAACTCGGAGTTCTCCACCACCTTCTCTAGGTACTTGTTaGAGATGTAGTAGTCCTTCAGCTTGGCGCTCAGCCGCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: SPRTRSSPPPSLGTC*RCSSPSAWRSAAGA
Trigger: AGCACCAGCGGCTGAGCGCCAAGCTGAAGGACTACTACATCTTCAACAAGTACCTAGAGAAGGTGGTGGAGAACTCCGAGTTCGAGGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS TCA 90 bp AGCGAGATTCCTCGGAGTTCTCCACCACCTTCTCTAGGTACTTGTTaGAGATGTAGTAGTCCTTCAGCTTGGCGCTCAGCCGCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: SEIPRSSPPPSLGTC*RCSSPSAWRSAAGA
Trigger: AGCACCAGCGGCTGAGCGCCAAGCTGAAGGACTACTACATCTTCAACAAGTACCTAGAGAAGGTGGTGGAGAACTCCGAGGAATCTCGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539522.2
CDS GCA 90 bp GATTCCCAGAAGATGACATTGCTGCGGGCACGGTCAAAGCGCATCTaGAGCCTTGCCAGCTCATTGTTTTGCTGCAGGATCTCATCATCC +
Preference number: 5 (lower is better)
Translates to: DSQKMTLLRARSKRI*SLASSLFCCRISSS
Trigger: GGATGATGAGATCCTGCAGCAAAACAATGAGCTGGCAAGGCTGCAGATGCGCTTTGACCGTGCCCGCAGCAATGTCATCTTCTGGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS GCA 90 bp GATAAATTGCTGGATCATGTCCAGCTGCTTGTGGGTGTCCTCCAGTaGCACCTCAGTCACCTCCTTCAGGTGCTTGCTCACGATCTGGAA +
Preference number: 5 (lower is better)
Translates to: DKLLDHVQLLVGVLQ*HLSHLLQVLAHDLE
Trigger: TTCCAGATCGTGAGCAAGCACCTGAAGGAGGTGACTGAGGTGGCACTGGAGGACACCCACAAGCAGCTGGACATGATCCAGCAATTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp GACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAGATGTGAGCCTTCAGTaGGGCTTCCTTAACGCCCAG +
Preference number: 5 (lower is better)
Translates to: DRRLTTSSFTISVSGHSGDVSLQ*GFLNAQ
Trigger: CTGGGCGTTAAGGAAGCCCAACTGAAGGCTCACATC...TCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp GACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAAGTTCTCGCTCCTTGTaGGCTTTCTTCATGGCGCGG +
Preference number: 5 (lower is better)
Translates to: DRRLTTSSFTISVSGHSGSSRSL*AFFMAR
Trigger: CCGCGCCATGAAGAAAGCCAACAAGGAGCGAGAACT...TCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp CGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTGCCTCAGCAGGAGGGTCTTCTaGGCTGCGGTGTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: RLLLSRSLSQDILEQGCLSRRVF*AAVFWM
Trigger: CATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCT...GAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp GTCCCGAGCTGGACTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTAATCCGGACTCGCTGTaGTTCCTTCTTTTTCACCTC +
Preference number: 5 (lower is better)
Translates to: VPSWTDWTAGSRLLLSRSNPDSL*FLLFHL
Trigger: GAGGTGAAAAAGAAGGAACAACAGCGAGTCCGGATT...AGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAGTCCAGCTCGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 90 bp GAAGATGACATTGCTGCGGGCACGGTCAAAGCGCATCTGCAGCCTTaGCAGCTCATTGTTTTGCTGCAGGATCTCATCATCCTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: EDDIAAGTVKAHLQP*QLIVLLQDLIILFL
Trigger: GAGGAAAAGGATGATGAGATCCTGCAGCAAAACAATGAGCTGGCAAGGCTGCAGATGCGCTTTGACCGTGCCCGCAGCAATGTCATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS-3UTR CAA 90 bp AGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGGTGGTGGCTGCACTCTaGTTTCTCCCTTCGGCCTAC +
Preference number: 5 (lower is better)
Translates to: RLTTSSFTISVSGHSGTRVVAAL*FLPSAY
Trigger: GTAGGCCGAAGGGAGAAACAAGAGTGCAGCCACCAC...CCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp GACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGATGCATGTGCTGGCACTaGAGTTCTCGCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: DRRLTTSSFTISVSGHSGCMCWH*SSRSLL
Trigger: CAACAAGGAGCGAGAACTCAAGTGCCAGCACATGCA...TCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp ACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAAACCTCCTTCAGGTGCTaGCTCACGATCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: TAGSRLLLSRSLSQDILETSFRC*LTIWKR
Trigger: CCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGGT...TTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp CTGACTGGACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACACCGGTCTTGGATAAATaGCTGGATCATGTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LTGPQAHDFFFHDLCLRTPVLDK*LDHVQL
Trigger: CAGCTGGACATGATCCAGCAATTTATCCAAGACCGG...TGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTCCAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp GACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAAGCCTTGCCAGCTCATaGTTTTGCTGCAGGATCTCA +
Preference number: 5 (lower is better)
Translates to: DRRLTTSSFTISVSGHSGSLASS*FCCRIS
Trigger: TGAGATCCTGCAGCAAAACAATGAGCTGGCAAGGCT...TCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS GCA 90 bp GCCTCCTTAAATCCGGACTCGCTGTTGTTCCTTCTTTTTCACCTCTaGCCAGATGTCCGACCGGTCTTGGATAAATTGCTGGATCATGTC +
Preference number: 5 (lower is better)
Translates to: ASLNPDSLLFLLFHL*PDVRPVLDKLLDHV
Trigger: GACATGATCCAGCAATTTATCCAAGACCGGTCGGACATCTGGGCAGAGGTGAAAAAGAAGGAACAACAGCGAGTCCGGATTTAAGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CCA 90 bp CAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTaGAACAAGGCTGCCTCCTTAAATCCGGACTCGCTGTTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: QAHDFFFHDLCLRTF*NKAASLNPDSLLFL
Trigger: AAGGAACAACAGCGAGTCCGGATTTAAGGAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp GACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAGATGTCCGACCGGTCTaGGATAAATTGCTGGATCAT +
Preference number: 5 (lower is better)
Translates to: DRRLTTSSFTISVSGHSGDVRPV*DKLLDH
Trigger: ATGATCCAGCAATTTATCCAAGACCGGTCGGACATC...TCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 90 bp CTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTaGCTCCTTAAATCCGGACTCGCTGTTGTTCCTTCTTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: LLLSRSLSQDILEQG*LLKSGLAVVPSFSP
Trigger: AGGTGAAAAAGAAGGAACAACAGCGAGTCCGGATTTAAGGAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS-3UTR CAA 90 bp ACCGCAGGCTCACGACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTGGAACTTCTGCACCATAGTTaGATGCATGATTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: TAGSRLLLSRSLSQDILELLHHS*MHDFCL
Trigger: GAGACAGAAATCATGCATCAAACTATGGTGCAGAAG...TTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTCGTGAGCCTGCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CCA 72 bp CGCGCCAGCCGGGCCTTGGCGCGCTCAATCTTCTCCTaGCCTTCCTGCGCAGACTGCATGAGGTCGTGGCGC +
Preference number: 6 (lower is better)
Translates to: RASRALARSIFS*PSCADCMRSWR
Trigger: GCGCCACGACCTCATGCAGTCTGCGCAGGAAGGCCAGGAGAAGATTGAGCGCGCCAAGGCCCGGCTGGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS GCA 72 bp AGCCGCTGGTGCTCCAGCCGCAGCGCCACCATCTCCTaGTTGCGCTTGGTCAGCTCCTGCATGTGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: SRWCSSRSATIS*LRLVSSCMCWH
Trigger: GTGCCAGCACATGCAGGAGCTGACCAAGCGCAAGCAGGAGATGGTGGCGCTGCGGCTGGAGCACCAGCGGCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 90 bp GCGCTCAGCCGCTGGTGCTCCAGCCGCAGCGCCACCATCTCCTGCTaGCGCTTGGTCAGCTCCTGCATGTGCTGGCACTTGAGTTCTCGC +
Preference number: 6 (lower is better)
Translates to: ALSRWCSSRSATISC*RLVSSCMCWHLSSR
Trigger: GCGAGAACTCAAGTGCCAGCACATGCAGGAGCTGACCAAGCGCAAGCAGGAGATGGTGGCGCTGCGGCTGGAGCACCAGCGGCTGAGCGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 72 bp CGGGCCTTGGCGCGCTCAATCTTCTCCTGGCCTTCCTaGGCAGACTGCATGAGGTCGTGGCGCATGCTCACC +
Preference number: 6 (lower is better)
Translates to: RALARSIFSWPS*ADCMRSWRMLT
Trigger: GGTGAGCATGCGCCACGACCTCATGCAGTCTGCGCAGGAAGGCCAGGAGAAGATTGAGCGCGCCAAGGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS CAA 72 bp CGCTGGTGCTCCAGCCGCAGCGCCACCATCTCCTGCTaGCGCTTGGTCAGCTCCTGCATGTGCTGGCACTTG +
Preference number: 6 (lower is better)
Translates to: RWCSSRSATISC*RLVSSCMCWHL
Trigger: CAAGTGCCAGCACATGCAGGAGCTGACCAAGCGCAAGCAGGAGATGGTGGCGCTGCGGCTGGAGCACCAGCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CCA 72 bp CATCCTTTTCCTCCATGTAGCGCGCCAGCCGGGCCTTaGCGCGCTCAATCTTCTCCTGGCCTTCCTGCGCAG +
Preference number: 6 (lower is better)
Translates to: HPFPPCSAPAGP*RAQSSPGLPAQ
Trigger: CTGCGCAGGAAGGCCAGGAGAAGATTGAGCGCGCCAAGGCCCGGCTGGCGCGCTACATGGAGGAAAAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS CAA 90 bp AGCCGCTGGTGCTCCAGCCGCAGCGCCACCATCTCCTGCTTGCGCTaGGTCAGCTCCTGCATGTGCTGGCACTTGAGTTCTCGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SRWCSSRSATISCLR*VSSCMCWHLSSRSL
Trigger: CAAGGAGCGAGAACTCAAGTGCCAGCACATGCAGGAGCTGACCAAGCGCAAGCAGGAGATGGTGGCGCTGCGGCTGGAGCACCAGCGGCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CCA 72 bp GTGCCAAGCAGGAGGGTCTTCTTGGCTGCGGTGTTCTaGATGTGCGCCCAGCGAGATTCCTCGGAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: VPSRRVFLAAVF*MCAQRDSSEFS
Trigger: GGAGAACTCCGAGGAATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539522.2
CDS CAA 72 bp TGCTCCAGCCGCAGCGCCACCATCTCCTGCTTGCGCTaGGTCAGCTCCTGCATGTGCTGGCACTTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: CSSRSATISCLR*VSSCMCWHLSS
Trigger: AGAACTCAAGTGCCAGCACATGCAGGAGCTGACCAAGCGCAAGCAGGAGATGGTGGCGCTGCGGCTGGAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS TCA 72 bp GCTCAATCTTCTCCTGGCCTTCCTGCGCAGACTGCATaGGGTCGTGGCGCATGCTCACCAGCGTCTTGTAGC +
Preference number: 6 (lower is better)
Translates to: AQSSPGLPAQTA*GRGACSPASCS
Trigger: GCTACAAGACGCTGGTGAGCATGCGCCACGACCTCATGCAGTCTGCGCAGGAAGGCCAGGAGAAGATTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS GCA 72 bp AGTTTCTGGAGCATCTGCAGCAGCCGCTCCCCATACTaGAGCCGGAAGTACTCGGCCAGGTCTTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SFWSICSSRSPY*SRKYSARSSSS
Trigger: GGAAGAGGAAGACCTGGCCGAGTACTTCCGGCTGCAGTATGGGGAGCGGCTGCTGCAGATGCTCCAGAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 72 bp GTGTCCTCCAGTGCCACCTCAGTCACCTCCTTCAGGTaGTTGCTCACGATCTGGAAGAGGTTCAGCGTGGCC +
Preference number: 6 (lower is better)
Translates to: VSSSATSVTSFR*LLTIWKRFSVA
Trigger: GGCCACGCTGAACCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGGTGACTGAGGTGGCACTGGAGGACAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 90 bp AGGTTCAGCGTGGCCATCTTAATGGTGCCAAGCAGGAGGGTCTTCTaGGCTGCGGTGTTCTGGATGTGCGCCCAGCGAGATTCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: RFSVAILMVPSRRVF*AAVFWMCAQRDSSE
Trigger: CTCCGAGGAATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATGGCCACGCTGAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539522.2
CDS CAA 90 bp AGGTTCAGCGTGGCCATCTTAATGGTGCCAAGCAGGAGGGTCTTCTaGGCTGCGGTGTTCTGGATGTGCGCCCAGCGAGATTCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: RFSVAILMVPSRRVF*AAVFWMCAQRDSQK
Trigger: CTTCTGGGAATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATGGCCACGCTGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS GCA 72 bp CCTCCAGTGCCACCTCAGTCACCTCCTTCAGGTGCTTaGTCACGATCTGGAAGAGGTTCAGCGTGGCCATCT +
Preference number: 6 (lower is better)
Translates to: PPVPPQSPPSGA*SRSGRGSAWPS
Trigger: AGATGGCCACGCTGAACCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGGTGACTGAGGTGGCACTGGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 72 bp CTGGATCATGTCCAGCTGCTTGTGGGTGTCCTCCAGTaGCACCTCAGTCACCTCCTTCAGGTGCTTGCTCAC +
Preference number: 6 (lower is better)
Translates to: LDHVQLLVGVLQ*HLSHLLQVLAH
Trigger: GTGAGCAAGCACCTGAAGGAGGTGACTGAGGTGGCACTGGAGGACACCCACAAGCAGCTGGACATGATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CCA 72 bp GTGCCAAGCAGGAGGGTCTTCTTGGCTGCGGTGTTCTaGATGTGCGCCCAGCGAGATTCCCAGAAGATGACA +
Preference number: 6 (lower is better)
Translates to: VPSRRVFLAAVF*MCAQRDSQKMT
Trigger: TGTCATCTTCTGGGAATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS CCA 72 bp GGGAAGGCATTAGGCCTGGTTAGATGCTGGTTGCCATaGAGCCCAGGGCCAGAGGCAGTTTCTGGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: GKALGLVRCWLP*SPGPEAVSGEC
Trigger: ACACTCACCAGAAACTGCCTCTGGCCCTGGGCTCCATGGCAACCAGCATCTAACCAGGCCTAATGCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581598.1
CDS CAA 72 bp TGGATGTGCGCCCAGCGAGATTCCCAGAAGATGACATaGCTGCGGGCACGGTCAAAGCGCATCTGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: WMCAQRDSQKMT*LRARSKRICSL
Trigger: AAGGCTGCAGATGCGCTTTGACCGTGCCCGCAGCAATGTCATCTTCTGGGAATCTCGCTGGGCGCACATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS CAA 72 bp GTGGCCATCTTAATGGTGCCAAGCAGGAGGGTCTTCTaGGCTGCGGTGTTCTGGATGTGCGCCCAGCGAGAT +
Preference number: 6 (lower is better)
Translates to: VAILMVPSRRVF*AAVFWMCAQRD
Trigger: ATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 72 bp TCCTCCAGTGCCACCTCAGTCACCTCCTTCAGGTGCTaGCTCACGATCTGGAAGAGGTTCAGCGTGGCCATC +
Preference number: 6 (lower is better)
Translates to: SSSATSVTSFRC*LTIWKRFSVAI
Trigger: GATGGCCACGCTGAACCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGGTGACTGAGGTGGCACTGGAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 90 bp CGCTTGGTCAGCTCCTGCATGTGCTGGCACTTGAGTTCTCGCTCCTaGTTGGCTTTCTTCATGGCGCGGATCCGTTTCTGGTCGTTCTCC +
Preference number: 6 (lower is better)
Translates to: RLVSSCMCWHLSSRS*LAFFMARIRFWSFS
Trigger: GGAGAACGACCAGAAACGGATCCGCGCCATGAAGAAAGCCAACAAGGAGCGAGAACTCAAGTGCCAGCACATGCAGGAGCTGACCAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 90 bp GCGGGCACGGTCAAAGCGCATCTGCAGCCTTGCCAGCTCATTGTTTaGCTGCAGGATCTCATCATCCTTTTCCTCCATGTAGCGCGCCAG +
Preference number: 6 (lower is better)
Translates to: AGTVKAHLQPCQLIV*LQDLIILFLHVARQ
Trigger: CTGGCGCGCTACATGGAGGAAAAGGATGATGAGATCCTGCAGCAAAACAATGAGCTGGCAAGGCTGCAGATGCGCTTTGACCGTGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS TCA 72 bp GCTTGCGCTTGGTCAGCTCCTGCATGTGCTGGCACTTaGGTTCTCGCTCCTTGTTGGCTTTCTTCATGGCGC +
Preference number: 6 (lower is better)
Translates to: ACAWSAPACAGT*VLAPCWLSSWR
Trigger: GCGCCATGAAGAAAGCCAACAAGGAGCGAGAACTCAAGTGCCAGCACATGCAGGAGCTGACCAAGCGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 72 bp CATCTTAATGGTGCCAAGCAGGAGGGTCTTCTTGGCTaGGGTGTTCTGGATGTGCGCCCAGCGAGATTCCCA +
Preference number: 6 (lower is better)
Translates to: HLNGAKQEGLLG*GVLDVRPARFP
Trigger: TGGGAATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS GCA 72 bp CATCTTAATGGTGCCAAGCAGGAGGGTCTTCTTGGCTaGGGTGTTCTGGATGTGCGCCCAGCGAGATTCCTC +
Preference number: 6 (lower is better)
Translates to: HLNGAKQEGLLG*GVLDVRPARFL
Trigger: GAGGAATCTCGCTGGGCGCACATCCAGAACACCGCAGCCAAGAAGACCCTCCTGCTTGGCACCATTAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539522.2
CDS CCA 72 bp GGAACTTCTGGGAAGGCATTAGGCCTGGTTAGATGCTaGTTGCCATGGAGCCCAGGGCCAGAGGCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: GTSGKALGLVRC*LPWSPGPEAVS
Trigger: AGAAACTGCCTCTGGCCCTGGGCTCCATGGCAACCAGCATCTAACCAGGCCTAATGCCTTCCCAGAAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581598.1
CDS CAA 90 bp GTTCTCCTGGATGAACTGCTCAGACTTCTGGATGTGAGCCTTCAGTaGGGCTTCCTTAACGCCCAGTTCCTCCCAGCGCAGGTTCAGGGT +
Preference number: 6 (lower is better)
Translates to: VLLDELLRLLDVSLQ*GFLNAQFLPAQVQG
Trigger: ACCCTGAACCTGCGCTGGGAGGAACTGGGCGTTAAGGAAGCCCAACTGAAGGCTCACATCCAGAAGTCTGAGCAGTTCATCCAGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 90 bp TTGGTCAGCTCCTGCATGTGCTGGCACTTGAGTTCTCGCTCCTTGTaGGCTTTCTTCATGGCGCGGATCCGTTTCTGGTCGTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LVSSCMCWHLSSRSL*AFFMARIRFWSFSW
Trigger: CCAGGAGAACGACCAGAAACGGATCCGCGCCATGAAGAAAGCCAACAAGGAGCGAGAACTCAAGTGCCAGCACATGCAGGAGCTGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 90 bp TTGTGGGTGTCCTCCAGTGCCACCTCAGTCACCTCCTTCAGGTGCTaGCTCACGATCTGGAAGAGGTTCAGCGTGGCCATCTTAATGGTG +
Preference number: 6 (lower is better)
Translates to: LWVSSSATSVTSFRC*LTIWKRFSVAILMV
Trigger: CACCATTAAGATGGCCACGCTGAACCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGGTGACTGAGGTGGCACTGGAGGACACCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 72 bp GATGAACTGCTCAGACTTCTGGATGTGAGCCTTCAGTaGGGCTTCCTTAACGCCCAGTTCCTCCCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: DELLRLLDVSLQ*GFLNAQFLPAQ
Trigger: CTGCGCTGGGAGGAACTGGGCGTTAAGGAAGCCCAACTGAAGGCTCACATCCAGAAGTCTGAGCAGTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 72 bp TCCTGCATGTGCTGGCACTTGAGTTCTCGCTCCTTGTaGGCTTTCTTCATGGCGCGGATCCGTTTCTGGTCG +
Preference number: 6 (lower is better)
Translates to: SCMCWHLSSRSL*AFFMARIRFWS
Trigger: CGACCAGAAACGGATCCGCGCCATGAAGAAAGCCAACAAGGAGCGAGAACTCAAGTGCCAGCACATGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 72 bp AGCTCCTGCATGTGCTGGCACTTGAGTTCTCGCTCCTaGTTGGCTTTCTTCATGGCGCGGATCCGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: SSCMCWHLSSRS*LAFFMARIRFW
Trigger: CCAGAAACGGATCCGCGCCATGAAGAAAGCCAACAAGGAGCGAGAACTCAAGTGCCAGCACATGCAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 72 bp TGCTTGCGCTTGGTCAGCTCCTGCATGTGCTGGCACTaGAGTTCTCGCTCCTTGTTGGCTTTCTTCATGGCG +
Preference number: 6 (lower is better)
Translates to: CLRLVSSCMCWH*SSRSLLAFFMA
Trigger: CGCCATGAAGAAAGCCAACAAGGAGCGAGAACTCAAGTGCCAGCACATGCAGGAGCTGACCAAGCGCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 72 bp AAGATGACATTGCTGCGGGCACGGTCAAAGCGCATCTaGAGCCTTGCCAGCTCATTGTTTTGCTGCAGGATC +
Preference number: 6 (lower is better)
Translates to: KMTLLRARSKRI*SLASSLFCCRI
Trigger: GATCCTGCAGCAAAACAATGAGCTGGCAAGGCTGCAGATGCGCTTTGACCGTGCCCGCAGCAATGTCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS CCA 72 bp ACCTCAGTCACCTCCTTCAGGTGCTTGCTCACGATCTaGAAGAGGTTCAGCGTGGCCATCTTAATGGTGCCA +
Preference number: 6 (lower is better)
Translates to: TSVTSFRCLLTI*KRFSVAILMVP
Trigger: TGGCACCATTAAGATGGCCACGCTGAACCTCTTCCAGATCGTGAGCAAGCACCTGAAGGAGGTGACTGAGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 72 bp CATTGCTGCGGGCACGGTCAAAGCGCATCTGCAGCCTaGCCAGCTCATTGTTTTGCTGCAGGATCTCATCAT +
Preference number: 6 (lower is better)
Translates to: HCCGHGQSASAA*PAHCFAAGSHH
Trigger: ATGATGAGATCCTGCAGCAAAACAATGAGCTGGCAAGGCTGCAGATGCGCTTTGACCGTGCCCGCAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS TCA 72 bp TCGTTCTCCTGGATGAACTGCTCAGACTTCTGGATGTaGGCCTTCAGTTGGGCTTCCTTAACGCCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: SFSWMNCSDFWM*AFSWASLTPSS
Trigger: GGAACTGGGCGTTAAGGAAGCCCAACTGAAGGCTCACATCCAGAAGTCTGAGCAGTTCATCCAGGAGAACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS TCA 72 bp CCTCGGAGTTCTCCACCACCTTCTCTAGGTACTTGTTaGAGATGTAGTAGTCCTTCAGCTTGGCGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: PRSSPPPSLGTC*RCSSPSAWRSA
Trigger: GGCTGAGCGCCAAGCTGAAGGACTACTACATCTTCAACAAGTACCTAGAGAAGGTGGTGGAGAACTCCGAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539522.2
CDS CAA 72 bp GCACGGTCAAAGCGCATCTGCAGCCTTGCCAGCTCATaGTTTTGCTGCAGGATCTCATCATCCTTTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ARSKRICSLASS*FCCRISSSFSS
Trigger: GGAGGAAAAGGATGATGAGATCCTGCAGCAAAACAATGAGCTGGCAAGGCTGCAGATGCGCTTTGACCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS CAA 90 bp AGGACATTCTGGAACAAGGCTGCCTCCTTAAATCCGGACTCGCTGTaGTTCCTTCTTTTTCACCTCTGCCCAGATGTCCGACCGGTCTTG +
Preference number: 6 (lower is better)
Translates to: RTFWNKAASLNPDSL*FLLFHLCPDVRPVL
Trigger: CAAGACCGGTCGGACATCTGGGCAGAGGTGAAAAAGAAGGAACAACAGCGAGTCCGGATTTAAGGAGGCAGCCTTGTTCCAGAATGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS TCA 72 bp ACTCGGAGTTCTCCACCACCTTCTCTAGGTACTTGTTaGAGATGTAGTAGTCCTTCAGCTTGGCGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: TRSSPPPSLGTC*RCSSPSAWRSA
Trigger: GGCTGAGCGCCAAGCTGAAGGACTACTACATCTTCAACAAGTACCTAGAGAAGGTGGTGGAGAACTCCGAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293845.8
CDS GCA 72 bp AATCCGGACTCGCTGTTGTTCCTTCTTTTTCACCTCTaGCCAGATGTCCGACCGGTCTTGGATAAATTGCTG +
Preference number: 6 (lower is better)
Translates to: NPDSLLFLLFHL*PDVRPVLDKLL
Trigger: CAGCAATTTATCCAAGACCGGTCGGACATCTGGGCAGAGGTGAAAAAGAAGGAACAACAGCGAGTCCGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS GCA 72 bp TCACGATCTCTGTCTCAGGACATTCTGGAACAAGGCTaGCTCCTTAAATCCGGACTCGCTGTTGTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: SRSLSQDILEQG*LLKSGLAVVPS
Trigger: AGAAGGAACAACAGCGAGTCCGGATTTAAGGAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CCA 72 bp GACTTCTTCTTTCACGATCTCTGTCTCAGGACATTCTaGAACAAGGCTGCCTCCTTAAATCCGGACTCGCTG +
Preference number: 6 (lower is better)
Translates to: DFFFHDLCLRTF*NKAASLNPDSL
Trigger: CAGCGAGTCCGGATTTAAGGAGGCAGCCTTGTTCCAGAATGTCCTGAGACAGAGATCGTGAAAGAAGAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293845.8
ENST00000539522.2
CDS CAA 72 bp GTCAAAGCGCATCTGCAGCCTTGCCAGCTCATTGTTTaGCTGCAGGATCTCATCATCCTTTTCCTCCATGTA +
Preference number: 6 (lower is better)
Translates to: VKAHLQPCQLIV*LQDLIILFLHV
Trigger: TACATGGAGGAAAAGGATGATGAGATCCTGCAGCAAAACAATGAGCTGGCAAGGCTGCAGATGCGCTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293845.8