RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC40 (Homo sapiens)

Ensembl gene IDs: ENSG00000141519

Ensembl transcript IDs: ENST00000269318.9, ENST00000374876.4, ENST00000374877.7, ENST00000397545.9, ENST00000571028.1, ENST00000572083.5, ENST00000572253.5, ENST00000572270.1, ENST00000573474.5, ENST00000573903.1, ENST00000574099.1, ENST00000574799.5, ENST00000574933.1, ENST00000575431.1, ENST00000576033.5, ENST00000576241.1

Found 1025 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTaGCTCTTCTCCAGCAGCTTCTGCAGGTGTACCAGGTGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: SSFCLRSLEAIAWRS*LFSSSFCRCTRCCC
Trigger: GCAGCAGCACCTGGTACACCTGCAGAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
3UTR GCA 90 bp GGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTTaGTGTATGCCAGGCTCTGTGCTGGGCACAAGGGGTGGAGACTAC +
Preference number: 1 (lower is better)
Translates to: GQPDPHSLVQPFLSA*CMPGSVLGTRGGDY
Trigger: GTAGTCTCCACCCCTTGTGCCCAGCACAGAGCCTGGCATACAGCAAGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR GCA 90 bp GGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTaGTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGC +
Preference number: 1 (lower is better)
Translates to: GVVPWCGRPSVLLFQ*SPCYVCLGPLTFSC
Trigger: GCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR TCA 90 bp CATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTaGCTGTCACAATCCTACTTAGCAATACCCGCTAGACCCAGACAT +
Preference number: 1 (lower is better)
Translates to: HAELSGDFETPLPGA*LSQSYLAIPARPRH
Trigger: ATGTCTGGGTCTAGCGGGTATTGCTAAGTAGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
3UTR CCA 90 bp GCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTaGGTGTGTGGGTCTGCAGTCACAGGCTCTGTCTTTGCGATGGGA +
Preference number: 1 (lower is better)
Translates to: ANQSVTWTSKPSVGV*VCGSAVTGSVFAMG
Trigger: TCCCATCGCAAAGACAGAGCCTGTGACTGCAGACCCACACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR CCA 90 bp GGAGTGCTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTaGGAGTGTGGGTGTGTGGGTCTGCAGTCACAGGCTCTGTCTTTG +
Preference number: 1 (lower is better)
Translates to: GVLQTKVLPGRVSPV*ECGCVGLQSQALSL
Trigger: CAAAGACAGAGCCTGTGACTGCAGACCCACACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAGCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR CCA 90 bp AGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGAGAGGACACTaGTTAGTCTGGGATGCAGGGGAGAGCTGGACAACAGGACCATCT +
Preference number: 1 (lower is better)
Translates to: SHVSEGNEDGLQRGH*LVWDAGESWTTGPS
Trigger: AGATGGTCCTGTTGTCCAGCTCTCCCCTGCATCCCAGACTAACCAGTGTCCTCTCTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
3UTR TCA 90 bp TCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTaGGAGGCACGTGCAGATTTGGGAGTGCTGCAAACCAAAGTGTTA +
Preference number: 1 (lower is better)
Translates to: SAQPTSLWTCGSVVL*EARADLGVLQTKVL
Trigger: TAACACTTTGGTTTGCAGCACTCCCAAATCTGCACGTGCCTCTCACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR GCA 90 bp CACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGAGAGGCACGTaGAGATTTGGGAGTGCTGCAAACCAAAGTGTTACCTGGACGAGT +
Preference number: 1 (lower is better)
Translates to: HQLVDLWQRCVVRGT*RFGSAANQSVTWTS
Trigger: ACTCGTCCAGGTAACACTTTGGTTTGCAGCACTCCCAAATCTGCACGTGCCTCTCACAACACAACGCTGCCACAGGTCCACAAGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR GCA 90 bp GATGACATGCACGTGCTTGTGTGTGTCCTGTGTTGTTCATGCACGTaGTTGTGTGTGTCCTGTGTTGTTCATGCACGTGCTGTGTGTGTC +
Preference number: 1 (lower is better)
Translates to: DDMHVLVCVLCCSCT*LCVSCVVHARAVCV
Trigger: GACACACACAGCACGTGCATGAACAACACAGGACACACACAAGCACGTGCATGAACAACACAGGACACACACAAGCACGTGCATGTCATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
3UTR CCA 90 bp GAGTGTGGGTGTGTGGGTCTGCAGTCACAGGCTCTGTCTTTGCGATaGGATGCCATGGGAAACGCTAGGATTTTACCTGGTTTATTAAAT +
Preference number: 1 (lower is better)
Translates to: ECGCVGLQSQALSLR*DAMGNARILPGLLN
Trigger: ATTTAATAAACCAGGTAAAATCCTAGCGTTTCCCATGGCATCCCATCGCAAAGACAGAGCCTGTGACTGCAGACCCACACACCCACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR TCA 90 bp GGGTACATGTGGTTTTTAGGAACACAAAAGATTCCAAGTCCCTCATaGCAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAAGGCG +
Preference number: 1 (lower is better)
Translates to: GYMWFLGTQKIPSPS*QTQFRISSWRPCKA
Trigger: CGCCTTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAATCTTTTGTGTTCCTAAAAACCACATGTACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR TCA 90 bp TGCTCTTATTTCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTaGCTTTCTCCTGCAAGCTGTGGATCTGAATTTAACTCAAATGGG +
Preference number: 1 (lower is better)
Translates to: CSYFSAHPVTCVWGH*LSPASCGSEFNSNG
Trigger: CCCATTTGAGTTAAATTCAGATCCACAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGAAATAAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR TCA 90 bp ATTATCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTaGCAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCG +
Preference number: 1 (lower is better)
Translates to: IIYFLHQSDWHSPEV*QHAELSGDFETPLP
Trigger: CGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
3UTR GCA 90 bp ACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTaGTTGTGTGTGTCCTGTGTTGTTCATGCACGTGCTTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: TWSRNKTAFCEMTCT*LCVSCVVHARACVC
Trigger: ACACACACAAGCACGTGCATGAACAACACAGGACACACACAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
3UTR-3UTR GCA 90 bp GCTGGACAACAGGACCATCTCGGAGGTGACGTCTTCCCTTGGGGACGCTGCAGGGAGAGCCAGGCCAGGTaGTGGACCCTCAGAGAGAAC +
Preference number: 2 (lower is better)
Translates to: AGQQDHLGGDVFPWGRCRESQAR*WTLREN
Trigger: GTTCTCTCTGAGGGTCCAGCACCTGGCCTGGCTCTC...CCTGCAGCGTCCCCAAGGGAAGACGTCACCTCCGAGATGGTCCTGTTGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
3UTR-3UTR CCA 90 bp CTGCTGCACCTCATAGAGATTCACCCCCAGCTCCTGCCGCTGGGCTCGGCTCTGCATCAGGGGGTGGTCTaGGTCCAAAACCACCAGCTG +
Preference number: 2 (lower is better)
Translates to: LLHLIEIHPQLLPLGSALHQGVV*VQNHQL
Trigger: CAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATG...CAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCTCTATGAGGTGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573474.5
3UTR-3UTR CCA 90 bp CCTCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTGACTCTCTTACCATCAGGGGGTaGTCTGGGTCCAAAACCACC +
Preference number: 2 (lower is better)
Translates to: PPPSACARSRPLRGGRDSLTIRG*SGSKTT
Trigger: GGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAG...AGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573474.5
3UTR-3UTR CCA 90 bp CAGCTCCTCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTGTTCTTCAGGGCAGCCTaGAATCTTACCATCAGGGGG +
Preference number: 2 (lower is better)
Translates to: QLLLLLPALARGHCVAVVFFRAA*NLTIRG
Trigger: CCCCCTGATGGTAAGATTCCAGGCTGCCCTGAAGAA...CACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
3UTR-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTGTGACTGCTGCTGGCTaGCTGGCTGCGGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSVTAAG*LAAGAV
Trigger: CACAGCACCCGCAGCCAGGCAGCCAGCAGCAGTCAC...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR-3UTR CCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTGGCTGCGGGTGCTGTaGGGCCAGCCAGACCCTCAT +
Preference number: 2 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSWLRVL*GQPDPH
Trigger: ATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR-3UTR CCA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTCCGGGCCAGGCTGGCTaGAGCTGCCTTAACTTTCCC +
Preference number: 2 (lower is better)
Translates to: SVLTLLRVSGATDFLLQAPGQAG*SCLNFP
Trigger: GGGAAAGTTAAGGCAGCTCCAGCCAGCCTGGCCCGG...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR CAA 90 bp TTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTaGTGTTGTGAGAGGCACGTGCAGATTTGGGAGTGCTGCAAACCA +
Preference number: 2 (lower is better)
Translates to: FPPLLSPPACGPVAA*CCERHVQIWECCKP
Trigger: TGGTTTGCAGCACTCCCAAATCTGCACGTGCCTCTCACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTTGTGTGACTGCTGCTaGCTGCCTGGCTGCGGGTGC +
Preference number: 2 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSLCDCC*LPGCGC
Trigger: GCACCCGCAGCCAGGCAGCCAGCAGCAGTCACACAA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR-3UTR CCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGGCTCTGTCTTTGCGATaGGATGCCATGGGAAACGCT +
Preference number: 2 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVALSLR*DAMGNA
Trigger: AGCGTTTCCCATGGCATCCCATCGCAAAGACAGAGC...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTCCTGGTTGTGTGACTaGTGCTGGCTGCCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSSWLCD*CWLPGC
Trigger: GCAGCCAGGCAGCCAGCAGCAGTCACACAACCAGGA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR-3UTR GCA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTCAGGCTGGCTGGAGCTaGCTTAACTTTCCCACCTCT +
Preference number: 2 (lower is better)
Translates to: SVLTLLRVSGATDFLLQAQAGWS*LNFPTS
Trigger: AGAGGTGGGAAAGTTAAGGCAGCTCCAGCCAGCCTG...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCGCTGGGCACAAGGGGTaGAGACTACGAAAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFAGHKG*RLRKVE
Trigger: CTCCACCTTTCGTAGTCTCCACCCCTTGTGCCCAGC...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR-3UTR CCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGCAGCTTGTGGACCTGTaGCAGCGTTGTGTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTQLVDL*QRCVVR
Trigger: TCTCACAACACAACGCTGCCACAGGTCCACAAGCTG...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR CAA 90 bp TTGCAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTaGCAGAGAGGACACTGGTTAGTCTGGGATGCAGGGGAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LQPKGSHVSEGNEDG*QRGHWLVWDAGESW
Trigger: CCAGCTCTCCCCTGCATCCCAGACTAACCAGTGTCCTCTCTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571028.1
3UTR-3UTR TCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTGGTCCAGCCTTTCTTaGGCGCTTGCTGTATGCCAG +
Preference number: 2 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSWSSLS*ALAVCQ
Trigger: CTGGCATACAGCAAGCGCTCAAGAAAGGCTGGACCA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR-3UTR TCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGTGTCTGGGGCCACTaGCTTTCTCCTGCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: LQRSPKVIGTWKSREKERCVWGH*LSPASC
Trigger: ACAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACA...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCGCGAGCCACTGCGCCTaGCCAGAAATGAGTATGGTT +
Preference number: 2 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFASHCA*PEMSMV
Trigger: AACCATACTCATTTCTGGCCAGGCGCAGTGGCTCGC...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR-3UTR CCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGCCCAGTGTGGGAGTGTaGGTGTGTGGGTCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMPSVGV*VCGSAV
Trigger: GACTGCAGACCCACACACCCACACTCCCACACTGGG...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CCA 90 bp CGGCTCTGCTTGGTAGCCACAACCAGCTCTTGGAGGTCCAGCTTCAACTTTTCGTCCAAAACCACCAGCTaGGACCCTTCGTCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: RLCLVATTSSWRSSFNFSSKTTS*DPSSSA
Trigger: AGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGA...CGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573474.5
3UTR-3UTR CCA 90 bp CAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGAGAGGAACCCAAGTGGGCAGATaGCCAAGTCCTCTCGTCCTG +
Preference number: 2 (lower is better)
Translates to: QPKGSHVSEGNEDGLQRGTQVGR*PSPLVL
Trigger: CAGGACGAGAGGACTTGGCCATCTGCCCACTTGGGT...TCCTCTCTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
3UTR-3UTR GCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAATCTTCCTGGAGGCCTTaGAAGGCGGAGTCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: VIGTWKSREKERWVNDGESSWRP*KAESRL
Trigger: CAGCCTGGACTCCGCCTTGCAAGGCCTCCAGGAAGA...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGCGAGTAAGCCCAGTGTaGGAGTGTGGGTGTGTGGGT +
Preference number: 2 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMRVSPV*ECGCVG
Trigger: ACCCACACACCCACACTCCCACACTGGGCTTACTCG...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CCA 90 bp TTGCAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGAGAGGACACTGGTTAGTCTaGGATGCAGGGGAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LQPKGSHVSEGNEDGLQRGHWLV*DAGESW
Trigger: CCAGCTCTCCCCTGCATCCCAGACTAACCAGTGTCC...TCTCTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571028.1
3UTR-3UTR TCA 90 bp TTTTTACAATGTTTGCAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACAGGGTTCACAGGCCATaGGCCTCGGAGAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: FLQCLQPKGSHVSEGNEDRVHRP*ASESQA
Trigger: GGCCTGGCTCTCCGAGGCTCATGGCCTGTGAACCCT...GTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTGCAAACATTGTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571028.1
3UTR-3UTR TCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAAGGCAGCGTTGTGTTGTaGGAGGCACGTGCAGATTTG +
Preference number: 2 (lower is better)
Translates to: VIGTWKSREKERWVNDGEGSVVL*EARADL
Trigger: CAAATCTGCACGTGCCTCTCACAACACAACGCTGCC...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR GCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCCAGGCGCCCACACCATaGCTGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFQAPTP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGTGGGCGCCTG...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR-3UTR CCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGCTAAAAAGATTCCTATaGGTGGGGCTGGCTTATTTC +
Preference number: 2 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTLKRFL*VGLAYF
Trigger: GAAATAAGCCAGCCCCACCCATAGGAATCTTTTTAG...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGCGATGGGATGCCATaGGAAACGCTAGGATTTTAC +
Preference number: 2 (lower is better)
Translates to: LQRSPKVIGTWKSREKERCDGMP*ETLGFY
Trigger: GTAAAATCCTAGCGTTTCCCATGGCATCCCATCGCA...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR TCA 90 bp TCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGCCGCTGCCGGGGGCGTaGCTGTCACAATCCTACTTA +
Preference number: 2 (lower is better)
Translates to: SIFFINRIGTVLKCDNMLPLPGA*LSQSYL
Trigger: TAAGTAGGATTGTGACAGTCACGCCCCCGGCAGCGG...CAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
3UTR-3UTR GCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAACACAGGCTCTGTCTTTaGGATGGGATGCCATGGGAA +
Preference number: 2 (lower is better)
Translates to: VIGTWKSREKERWVNDGEHRLCL*DGMPWE
Trigger: TTCCCATGGCATCCCATCGCAAAGACAGAGCCTGTG...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR GCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCCAGATTTGGGAGTGCTaGAAACCAAAGTGTTACCTG +
Preference number: 2 (lower is better)
Translates to: LQRSPKVIGTWKSREKERQIWEC*KPKCYL
Trigger: CAGGTAACACTTTGGTTTGCAGCACTCCCAAATCTG...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR GCA 90 bp TCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGACTTTGAAACACCGCTaGCGGGGGCGTGACTGTCAC +
Preference number: 2 (lower is better)
Translates to: SIFFINRIGTVLKCDNMLTLKHR*RGRDCH
Trigger: GTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGT...CAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
3UTR-3UTR CCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAAAGGCACGTGCAGATTTaGGAGTGCTGCAAACCAAAG +
Preference number: 2 (lower is better)
Translates to: VIGTWKSREKERWVNDGERHVQI*ECCKPK
Trigger: CTTTGGTTTGCAGCACTCCCAAATCTGCACGTGCCT...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGTCCTATGGGTGGGGCTaGCTTATTTCTCTTAAACGA +
Preference number: 2 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMSYGWG*LISLKR
Trigger: TCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGCAGCGTTTTGTGAGATaGCATGCACGTGCTTGTGTG +
Preference number: 2 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRQRFVR*HARACV
Trigger: CACACAAGCACGTGCATGTCATCTCACAAAACGCTG...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
3UTR-3UTR GCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGGTGCAGATTTGGGAGTaGTGCAAACCAAAGTGTTAC +
Preference number: 2 (lower is better)
Translates to: KLQRSPKVIGTWKSREKEVQIWE*CKPKCY
Trigger: GTAACACTTTGGTTTGCAGCACTCCCAAATCTGCAC...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGCGTGCTGTGATTACATaGAGTAGGAATAAAACAGCG +
Preference number: 2 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRRAVIT*SRNKTA
Trigger: CGCTGTTTTATTCCTACTCCATGTAATCACAGCACG...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
3UTR-3UTR TCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAGAGGGTCACAAAGTTTaGGGGTTACAACCGGCATTT +
Preference number: 2 (lower is better)
Translates to: LITSLLKAMKSNCDHGETEGHKV*GLQPAF
Trigger: AAATGCCGGTTGTAACCCTCAAACTTTGTGACCCTC...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
3UTR-3UTR TCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAAATACCAGCGTGCTGTaGTTACATGGAGTAGGAATA +
Preference number: 2 (lower is better)
Translates to: LITSLLKAMKSNCDHGETNTSVL*LHGVGI
Trigger: TATTCCTACTCCATGTAATCACAGCACGCTGGTATT...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
3UTR GCA 72 bp GGAAAAGCATCTCCTGGTTGTGTGACTGCTGCTGGCTaGCTGGCTGCGGGTGCTGTGGGGCCAGCCAGACCC +
Preference number: 3 (lower is better)
Translates to: GKASPGCVTAAG*LAAGAVGPARP
Trigger: GGGTCTGGCTGGCCCCACAGCACCCGCAGCCAGGCAGCCAGCAGCAGTCACACAACCAGGAGATGCTTTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR TCA 72 bp TGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTaGCTCTTCTCCAGCAGCTTCTGCAGGTGTACCAGG +
Preference number: 3 (lower is better)
Translates to: CLRSLEAIAWRS*LFSSSFCRCTR
Trigger: CCTGGTACACCTGCAGAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
3UTR GCA 72 bp AGATTCACCCCCAGCTCCTGCCGCTGGGCTCGGCTCTaGTTGGTAGCCACAACCAGCTCTTGGAGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: RFTPSSCRWARL*LVATTSSWRSS
Trigger: GCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573474.5
3UTR-3UTR CAA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGGCGTAGTCCCTaGGTGTGGACGCCCCAGCGT +
Preference number: 3 (lower is better)
Translates to: TAKKPQGHWYLEVQGERALGRSP*VWTPQR
Trigger: ACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAG...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CAA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGTCACAGGCTCTGTCTTaGCGATGGGATGCCATGGGA +
Preference number: 3 (lower is better)
Translates to: RLGRSPLVWTPQRALISVSQALS*RWDAMG
Trigger: TCCCATGGCATCCCATCGCAAAGACAGAGCCTGTGA...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR TCA 72 bp CCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTaGGAGGCACGTGCAGATTTGGGAGTGCTGCAAACC +
Preference number: 3 (lower is better)
Translates to: PTSLWTCGSVVL*EARADLGVLQT
Trigger: GGTTTGCAGCACTCCCAAATCTGCACGTGCCTCTCACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR GCA 72 bp CCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTaGTCACCCTGTTACGTGTGTCTGGGGCCACTGACT +
Preference number: 3 (lower is better)
Translates to: PWCGRPSVLLFQ*SPCYVCLGPLT
Trigger: AGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CAA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGGAGGCACGTGCAGATTaGGGAGTGCTGCAAACCAAA +
Preference number: 3 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLEARAD*GVLQTK
Trigger: TTTGGTTTGCAGCACTCCCAAATCTGCACGTGCCTC...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR TCA 72 bp CTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTaGCTGTCACAATCCTACTTAGCAATACCCGCTAGA +
Preference number: 3 (lower is better)
Translates to: LSGDFETPLPGA*LSQSYLAIPAR
Trigger: TCTAGCGGGTATTGCTAAGTAGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
3UTR CCA 72 bp CAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTaGGAGTGTGGGTGTGTGGGTCTGCAGTCACAGGCT +
Preference number: 3 (lower is better)
Translates to: QTKVLPGRVSPV*ECGCVGLQSQA
Trigger: AGCCTGTGACTGCAGACCCACACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CAA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCTCTTCCTGGAGGCCTaGCAAGGCGGAGTCCAGGCT +
Preference number: 3 (lower is better)
Translates to: KLQRSPKVIGTWKSREKELFLEA*QGGVQA
Trigger: AGCCTGGACTCCGCCTTGCAAGGCCTCCAGGAAGAG...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CAA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCAAAAGCATCTCCTGGTaGTGTGACTGCTGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFKSISW*CDCCWL
Trigger: CAGCCAGCAGCAGTCACACAACCAGGAGATGCTTTT...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR CCA 72 bp TGTGTGGGTCTGCAGTCACAGGCTCTGTCTTTGCGATaGGATGCCATGGGAAACGCTAGGATTTTACCTGGT +
Preference number: 3 (lower is better)
Translates to: CVGLQSQALSLR*DAMGNARILPG
Trigger: ACCAGGTAAAATCCTAGCGTTTCCCATGGCATCCCATCGCAAAGACAGAGCCTGTGACTGCAGACCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR TCA 72 bp AAATCTAATTGTGACCATGGAGAGACAACGCGGCTGTaGAGGATGAGATGGGGGTGCTCTCTGAGCCCTTCT +
Preference number: 3 (lower is better)
Translates to: KSNCDHGETTRL*RMRWGCSLSPS
Trigger: AGAAGGGCTCAGAGAGCACCCCCATCTCATCCTTCACAGCCGCGTTGTCTCTCCATGGTCACAATTAGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374877.7
3UTR-3UTR CAA 90 bp TGTTTGCAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGAGAGAGAACCTGGCCTaGACTTTTCTTAAGGCCCGT +
Preference number: 3 (lower is better)
Translates to: CLQPKGSHVSEGNEDGLQRENLA*TFLKAR
Trigger: ACGGGCCTTAAGAAAAGTCAAGGCCAGGTTCTCTCT...CTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTGCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571028.1
3UTR TCA 72 bp TTCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTaGCTTTCTCCTGCAAGCTGTGGATCTGAATTTAAC +
Preference number: 3 (lower is better)
Translates to: FSAHPVTCVWGH*LSPASCGSEFN
Trigger: GTTAAATTCAGATCCACAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR CCA 72 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTaGGTTAATGATGGAGAAAAGATAGGTGGGCAGACT +
Preference number: 3 (lower is better)
Translates to: VIGTWKSREKER*VNDGEKIGGQT
Trigger: AGTCTGCCCACCTATCTTTTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR-3UTR CAA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAAGGTAAAGAAGGTGGTTaGTGGGTTTTCAGATGCACC +
Preference number: 3 (lower is better)
Translates to: VIGTWKSREKERWVNDGEGKEGG*WVFRCT
Trigger: GGTGCATCTGAAAACCCACAAACCACCTTCTTTACC...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR TCA 72 bp TTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTaGCAACATGCTGAGCTGTCAGGGGACTTTGAAACA +
Preference number: 3 (lower is better)
Translates to: FLHQSDWHSPEV*QHAELSGDFET
Trigger: TGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
3UTR CCA 72 bp TTTAAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTaGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGAT +
Preference number: 3 (lower is better)
Translates to: FKLQRSPKVIGT*KSREKERWVND
Trigger: ATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR TCA 72 bp TGGTTTTTAGGAACACAAAAGATTCCAAGTCCCTCATaGCAAACACAATTCCGGATCTCTTCCTGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: WFLGTQKIPSPS*QTQFRISSWRP
Trigger: AGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAATCTTTTGTGTTCCTAAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
3UTR TCA 72 bp TTTTATGAACTGCTCTTACTGTTATCCTTAAGGCCCTaGACCTTTAGCTTGATGACCACTTGCAATTTAATT +
Preference number: 3 (lower is better)
Translates to: FYELLLLLSLRP*TFSLMTTCNLI
Trigger: AATTAAATTGCAAGTGGTCATCAAGCTAAAGGTTCAGGGCCTTAAGGATAACAGTAAGAGCAGTTCATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TGCAGCTCCTCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGGGCATCGGGCACCCCTaGGGGGATCACTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CSSSSFCLRSLEAIAWRSGIGHP*GDHWLL
Trigger: CAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCC...CGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp CACCCCCAGCTCCTGCCGCTGGGCTCGGCTCTGCTTGGTAGCCACAACCAGCTCTGGCCCCCTCCTCGGTaGTGGGCTGCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: HPQLLPLGSALLGSHNQLWPPPR*WAAGSG
Trigger: ACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCA...GAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCGTGCTGGACGCCCATTaGGAGCACCTGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFVLDAH*EHLPLG
Trigger: CCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCAC...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTGACTCTTCTCCAGCAGCCCCCTCCTCGGTGCTaGGCTGCTGGATCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LPALARGHCVAVVTLLQQPPPRC*AAGSGP
Trigger: AGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGG...CTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCCGGCTGCGCAGGTCTTaGTGTAGAGAGCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFRLRRS*CRERGR
Trigger: CCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCG...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp CTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTGACTCTTCTCCAGCAGCCTCCTCCTTCTGCCTaGGCTCGCTCGAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: LPALARGHCVAVVTLLQQPPPSA*ARSRPL
Trigger: CAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGG...CTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp AGATTCACCCCCAGCTCCTGCCGCTGGGCTCGGCTCTGCTTGGTAGCCACAACCAGCTCCTCCTCCTTCTaGCTGCGCTCGCTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: RFTPSSCRWARLCLVATTSSSSF*LRSLEA
Trigger: GGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCT...GGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp GCTGGACAACAGGACCATCTCGGAGGTGACGTCTTCCCTTGGGGACGCTGCAGGTCCAGCACCGCCCTGTaGGCCTCGTCGCGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGQQDHLGGDVFPWGRCRSSTAL*ASSRCF
Trigger: GAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGA...CCTGCAGCGTCCCCAAGGGAAGACGTCACCTCCGAGATGGTCCTGTTGTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR CCA 90 bp CTCCTGCCGCTGGGCTCGGCTCTGCTTGGTAGCCACAACCAGCTCTTGGAGGTCTCGATGTCGCTCCCGTaGCTCAGCCGGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LLPLGSALLGSHNQLLEVSMSLP*LSRKRC
Trigger: GCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGA...GACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR TCA 90 bp TGCAGCTCCTCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGATTGCGTGGCGGTCGTaGCTCTTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CSSSSFCLRSLEAIAWRSIAWRS*LFSSSF
Trigger: GAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAAT...CGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCTGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR TCA 90 bp CCTCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTGACTCTGCCCATTGGGAGCACTaGTTTGCCCTTCCGGGGATG +
Preference number: 4 (lower is better)
Translates to: PPPSACARSRPLRGGRDSAHWEH*FALPGM
Trigger: CATCCCCGGAAGGGCAAATCAGTGCTCCCAATGGGC...AGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp CTCCTGCCGCTGGGCTCGGCTCTGCTTGGTAGCCACAACCAGCTCTTGGAGGTCGGACTCCACTCTCTCTaGCATGGCCCCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: LLPLGSALLGSHNQLLEVGLHSL*HGPLLG
Trigger: ACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCC...GACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp CACCCCCAGCTCCTGCCGCTGGGCTCGGCTCTGCTTGGTAGCCACAACCAGCTCGGACCCTTCGTCTTCTaGTTCCTCGTCACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HPQLLPLGSALLGSHNQLGPFVF*FLVTPL
Trigger: GAGGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCC...GAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGCGTCGCGGTGCTTCATaGCCACCAGGCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVRRGAS*PPGCWP
Trigger: GGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACG...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATGATCCATCTTCCGGATaGGACCGGCCCGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNDPSSG*DRPAAP
Trigger: CGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATC...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCGGGCCTAAGACTCCGTaGGATGGCTCTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFGPKTP*DGSGEV
Trigger: CACCTCCCCAGAGCCATCCCACGGAGTCTTAGGCCC...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTGGCATCGGGCACCCCTaGGGGGATCACTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAGIGHP*GDHWLL
Trigger: CAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCC...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374876.4
3UTR CAA 72 bp TTCACCCCCAGCTCCTGCCGCTGGGCTCGGCTCTGCTaGGTAGCCACAACCAGCTCTTGGAGGTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FTPSSCRWARLC*VATTSSWRSSF
Trigger: GAAGCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR TCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCTGCTGGCCCAGAGGTaGCCTGGCCCATTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSALLAQR*PGPFAP
Trigger: CGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR TCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACGCTGTCAGGGGACTTTaGAACACCGCTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDAVRGL*NTAAGG
Trigger: GCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGC...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp GCTGGACAACAGGACCATCTCGGAGGTGACGTCTTCCCTTGGGGACGCTGCAGGGGACCATCTCGGAGGTaGCGTCTTCCCTTGGGGACG +
Preference number: 4 (lower is better)
Translates to: AGQQDHLGGDVFPWGRCRGPSRR*RLPLGT
Trigger: CGTCCCCAAGGGAAGACGTCACCTCCGAGATGGTCC...CCTGCAGCGTCCCCAAGGGAAGACGTCACCTCCGAGATGGTCCTGTTGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR GCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCCCATTGGGAGCACCTaGCCCTGGGGCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAPIGST*PWGSSV
Trigger: CACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACCTCAGCCGGAAGCGGTaGTGGACGCCCATTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDLSRKR*WTPIGS
Trigger: GCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAG...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp AGATTCACCCCCAGCTCCTGCCGCTGGGCTCGGCTCTGCTTGGTAGCCACAACCTCCTCGGTGCTGGGCTaGTGGATCTGGTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RFTPSSCRWARLCLVATTSSVLG*WIWSWN
Trigger: GTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGA...GGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGGCCCCCTCCTCGGTaGTGGGCTGCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDWPPPR*WAAGSG
Trigger: ACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCA...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCCTCCTCGTTGGCGGCTaGGCAGGTCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFLLVGG*AGLGVE
Trigger: CTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAG...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCGTCGCGGTGCTTCATaGCCACCAGGCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNRRGAS*PPGCWP
Trigger: GGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACG...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTGTGACTGCTGCTGGCTaGCTGGCTGCGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAVTAAG*LAAGAV
Trigger: CACAGCACCCGCAGCCAGGCAGCCAGCAGCAGTCAC...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTGGGAGCACCTGCCCCTaGGGCTCCTCTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAGSTCP*GSSVDP
Trigger: AGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCC...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATGCAGGTCTCCTTCCCTaGGGTGGGCATCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNAGLLP*GGHRAP
Trigger: GGGTGCCCGATGCCCACCCCAGGGAAGGAGACCTGC...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp CCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTGACTCTTCTCCACTGGGCTGCTGGATCTaGTCCTGGAACACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSACARSRPLRGGRDSSPLGCWI*SWNTGR
Trigger: CCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAG...TGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp CCTCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTGACTCTTCGGTGCTGGGCTGCTaGATCTGGTCCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: PPPSACARSRPLRGGRDSSVLGC*IWSWNT
Trigger: AGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGA...AGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCCCCCTCCTCGGTGCTaGGCTGCTGGATCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAPPPRC*AAGSGP
Trigger: AGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTTTGCGCTCCTCGTTaGCGGCTGCGCAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFFCAPR*RLRRSW
Trigger: CCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAA...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCCTGGTCTTGAACTCCTaGCCTCGTGACCCACCCGTC +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFLVLNS*PRDPPV
Trigger: GACGGGTGGGTCACGAGGCCAGGAGTTCAAGACCAG...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTGGATCCTGTCAATCTaGCCACTGCTGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFWILSI*PLLAQR
Trigger: CCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCCA...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGGGACTCCACTCTCTCTaGCATGGCCCCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVGLHSL*HGPLLG
Trigger: ACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCC...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACCGCTGGGCTCGGCTCTaGTTGGTAGCCACAACCAGC +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDRWARL*LVATTS
Trigger: GCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCG...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCGCTGGGCTCGGCTCTaGTTGGTAGCCACAACCAGC +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSARWARL*LVATTS
Trigger: GCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp CTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTGACTCTTCTCCAGCAGTTCTCCAGCAGCTTCTaGAGGTGTACCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPALARGHCVAVVTLLQQFSSSF*RCTRCC
Trigger: GCAGCACCTGGTACACCTGCAGAAGCTGCTGGAGAA...CTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATAGCTCCTCCTCCTTCTaGCTGCGCTCGCTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNSSSSF*LRSLEA
Trigger: GGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCT...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCCGGTGGCCTCTTGCTaGAAGCCTTGGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAPVASC*KPWRPA
Trigger: GGCTGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCCCTGGGGCTCCTCTGTaGATCCTGTCAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFPGAPL*ILSICP
Trigger: TGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGG...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATTCGATGTCGCTCCCGTaGCTCAGCCGGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNSMSLP*LSRKRC
Trigger: GCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGA...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp CTCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTGACTCTTCATCAGGGGGTGGTCTaGGTCCAAAACCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLLLPALARGHCVAVVTLHQGVV*VQNHQL
Trigger: CAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATG...AAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR TCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTCGTATCTGCAGCACTaGTTTGCCCTTCCGGGGATG +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFSYLQH*FALPGM
Trigger: CATCCCCGGAAGGGCAAATCAGTGCTGCAGATACGA...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR TCA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTGCCTCTTCTCCACGCTaGTGGCGTCGATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCASSPR*WRRSRC
Trigger: GCACCGAGATCGACGCCATCAGCGTGGAGAAGAGGC...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACGGACCGGTGGCCTCTTaGTGGAAGCCTTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDGPVAS*WKPWRP
Trigger: TGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCC...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGTGGCCCCCTCCTCGGTaGTGGGCTGCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLWPPPR*WAAGSG
Trigger: ACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCA...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp AGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCCTGGACTCCACTCTCTCTaGCATGGCCCCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SCQGTLKHRCRGRDCHNPGLHSL*HGPLLG
Trigger: ACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCC...AGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCCTCCTCCTTCTGCCTaGGCTCGCTCGAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCPPPSA*ARSRPL
Trigger: CAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGG...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTGAGCCGCCAACTTTTTaGGCTCCTCGTTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAEPPTF*APRWRL
Trigger: CAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTC...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp CTGGACAACAGGACCATCTCGGAGGTGACGTCTTCCCTTGGGGACGCTGCAGGGTGGCGTCGATCTCGGTaGAGGCCTCACTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: LDNRTISEVTSSLGDAAGWRRSR*RPHSLL
Trigger: AAGCAGTGAGTGAGGCCTGCACCGAGATCGACGCCA...CCCTGCAGCGTCCCCAAGGGAAGACGTCACCTCCGAGATGGTCCTGTTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR GCA 90 bp CTGGACAACAGGACCATCTCGGAGGTGACGTCTTCCCTTGGGGACGCTGCAGGGAGGCTGCTGGCCCATTaGTGCATGATGCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LDNRTISEVTSSLGDAAGRLLAH*CMMRLF
Trigger: GAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCT...CCCTGCAGCGTCCCCAAGGGAAGACGTCACCTCCGAGATGGTCCTGTTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR GCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTTCCTGGTTGTGTGACTaGTGCTGGCTGCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSASWLCD*CWLPGC
Trigger: GCAGCCAGGCAGCCAGCAGCAGTCACACAACCAGGA...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGGGCCTGGACCGCCTTaGCATCGTGCTCGTCGATCA +
Preference number: 4 (lower is better)
Translates to: AALTFPPLLSPPACGPVAGPGPP*HRARRS
Trigger: TGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCC...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGGTCACCCGGTTGTTCTaGTCCAGCTCCTCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVVTRLF*SSSSEL
Trigger: CAGCTCGGAGGAGCTGGAGCAGAACAACCGGGTGAC...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTGATCCATCTTCCGGATaGGACCGGCCCGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSDPSSG*DRPAAP
Trigger: CGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATC...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTGATCCATCTTCCGGATaGGACCGGCCCGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LQTKVLPGRVSPVWECGCDPSSG*DRPAAP
Trigger: CGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATC...ACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCATTCTGGTGGACCGGTaGCCTCTTGCTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFILVDR*PLAGSL
Trigger: AAGGCTTCCAGCAAGAGGCCACCGGTCCACCAGAAT...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGGCATCGGGCACCCCTaGGGGGATCACTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SVLTLLRVSGATDFLLQAGIGHP*GDHWLL
Trigger: CAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCC...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CGGCTCTGCTTGGTAGCCACAACCAGCTCTTGGAGGTCCAGCTTCAACTTTTCGGCAGGTCTCCTTCCCTaGGGTGGGCATCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: RLCLVATTSSWRSSFNFSAGLLP*GGHRAP
Trigger: GGGTGCCCGATGCCCACCCCAGGGAAGGAGACCTGC...CGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTGCTGGATCTGGTCCTaGAACACTGGCAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFCWIWS*NTGRSP
Trigger: AGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCA...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp AGATTCACCCCCAGCTCCTGCCGCTGGGCTCGGCTCTGCTTGGTAGCCACAACCTGCTGGATCTGGTCCTaGAACACTGGCAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RFTPSSCRWARLCLVATTCWIWS*NTGRSP
Trigger: AGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCA...GGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACCTGGGCTGCTGGATCTaGTCCTGGAACACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDLGCWI*SWNTGR
Trigger: CCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAG...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCTGGGCTGCTGGATCTaGTCCTGGAACACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSALGCWI*SWNTGR
Trigger: CCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCCTTACCATCAGGGGGTaGTCTGGGTCCAAAACCACC +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFLTIRG*SGSKTT
Trigger: GGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAG...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp AGATTCACCCCCAGCTCCTGCCGCTGGGCTCGGCTCTGCTTGGTAGCCACAACCCTTACCATCAGGGGGTaGTCTGGGTCCAAAACCACC +
Preference number: 4 (lower is better)
Translates to: RFTPSSCRWARLCLVATTLTIRG*SGSKTT
Trigger: GGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAG...GGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCCGCGTCCCGAGACCTaGTCACCCTGGGTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAPRPET*SPWVVL
Trigger: TAAAACCACCCAGGGTGACCAGGTCTCGGGACGCGG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGAGTAGAGGGAAGTGCTaGGGGGACCAGCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLSRGKC*GDQPPG
Trigger: CCCGGGAGGCTGGTCCCCCCAGCACTTCCCTCTACT...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GCCTGGAATCTTACCATCAGGGGGTGGTCTGGGTCCAAAACCACCAGCTGGGACAGCCGGAAGCGGTGCTaGACGCCCATTGGGAGCACT +
Preference number: 4 (lower is better)
Translates to: AWNLTIRGWSGSKTTSWDSRKRC*TPIGST
Trigger: AGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCT...GTCCCAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAGATTCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp GGATGCAGGGGAGAGCTGGACAACAGGACCATCTCGGAGGTGACGTCTTCCCTTTTGCCCGGCCACAGCTaGCTCTGGTTCCTCGACCTG +
Preference number: 4 (lower is better)
Translates to: GCRGELDNRTISEVTSSLLPGHS*LWFLDL
Trigger: CAGGTCGAGGAACCAGAGCCAGCTGTGGCCGGGCAA...AAGGGAAGACGTCACCTCCGAGATGGTCCTGTTGTCCAGCTCTCCCCTGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR TCA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATGAACTCCTCCAGGTCTaGGGACTCGATGTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNELLQV*GLDVAP
Trigger: GGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTC...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTGCTGGGCTCGAGTGGTaGGCTGGTCCACATACAGGT +
Preference number: 4 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCAGLEW*AGPHTG
Trigger: ACCTGTATGTGGACCAGCTCACCACTCGAGCCCAGC...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTGTGACCTGGCCCATTTaGTCCGACGGGCCTAAGACT +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAVTWPI*SDGPKT
Trigger: AGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCAC...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGGATCCTGTCAATCTaGCCACTGCTGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDWILSI*PLLAQR
Trigger: CCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCCA...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp AGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCCTTCCTCGGTGCTGGGCTaGTGGATCTGGTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SCQGTLKHRCRGRDCHNPSSVLG*WIWSWN
Trigger: GTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGA...AGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTGGACCCTTCGTCTTCTaGTTCCTCGTCACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAGPFVF*FLVTPL
Trigger: GAGGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCC...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGCGCTGGGCTCGGCTCTaGTTGGTAGCCACAACCAGC +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTRWARL*LVATTS
Trigger: GCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCG...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCTCCTCGTTGGCGGCTaGGCAGGTCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCLLVGG*AGLGVE
Trigger: CTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAG...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGGAGCCGCCAACTTTTTaGGCTCCTCGTTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVEPPTF*APRWRL
Trigger: CAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTC...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GACAACAGGACCATCTCGGAGGTGACGTCTTCCCTTGGGGACGCTGCAGGGTTCCTGCTGGCCCATTGCTaGATGATGCGCCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DNRTISEVTSSLGDAAGFLLAHC*MMRLFS
Trigger: GGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAG...GAACCCTGCAGCGTCCCCAAGGGAAGACGTCACCTCCGAGATGGTCCTGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR GCA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTTGCGCCTCGTCGCGGTaGTTCATGCCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SVLTLLRVSGATDFLLQACASSR*FMPTRL
Trigger: CAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCA...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTAGGCGGAGTCCAGGCTaGTCCCTAGGAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LQTKVLPGRVSPVWECGCRRSPG*SLGGPW
Trigger: CCAGGGCCCTCCTAGGGAGCAGCCTGGACTCCGCCT...ACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATTCCGTGGGATGGCTCTaGGGAGGTGACCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNSVGWL*GGDPPF
Trigger: GAAAGGAGGGTCACCTCCCCAGAGCCATCCCACGGA...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGGTGCTGGACGCCCATTaGGAGCACCTGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLVLDAH*EHLPLG
Trigger: CCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCAC...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTGCAGGTCTCCTTCCCTaGGGTGGGCATCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSAGLLP*GGHRAP
Trigger: GGGTGCCCGATGCCCACCCCAGGGAAGGAGACCTGC...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTGCAGGTCTCCTTCCCTaGGGTGGGCATCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: LQTKVLPGRVSPVWECGCAGLLP*GGHRAP
Trigger: GGGTGCCCGATGCCCACCCCAGGGAAGGAGACCTGC...ACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GCTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGCCCCCTCCTCGGTGCTaGGCTGCTGGATCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: AANQSVTWTSKPSVGVWVPPPRC*AAGSGP
Trigger: AGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGG...CACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCATCAGGGGGTGGTCTaGGTCCAAAACCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAHQGVV*VQNHQL
Trigger: CAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGTGACTCTTCTCCATTCTTCAGGGCAGCCTaGAATCTTACCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PSACARSRPLRGGRDSSPFFRAA*NLTIRG
Trigger: CCCCCTGATGGTAAGATTCCAGGCTGCCCTGAAGAA...TGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGCGGCTGCGCAGGTCTTaGTGTAGAGAGCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLRLRRS*CRERGR
Trigger: CCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCG...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTGCTGGGCACAAGGGGTaGAGACTACGAAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAAGHKG*RLRKVE
Trigger: CTCCACCTTTCGTAGTCTCCACCCCTTGTGCCCAGC...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTCAGGTCACCTGGGCCTaGACCGCCTTGCCATCGTGC +
Preference number: 4 (lower is better)
Translates to: SVLTLLRVSGATDFLLQAQVTWA*TALPSC
Trigger: GCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTG...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGGCCCGGATCTCCGTCTaGCCGATCTCGGAATCCACT +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVARISV*PISEST
Trigger: AGTGGATTCCGAGATCGGCCAGACGGAGATCCGGGC...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGTTGTGCAGGGCCTCCTaGAACTGGGGGTACTCGTCC +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVLCRAS*NWGYSS
Trigger: GGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAA...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGGATAGGTGGGCAGACTaGGGCGTAGTCCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVDRWAD*GVVPWC
Trigger: ACACCAAGGGACTACGCCCCAGTCTGCCCACCTATC...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CTGGACAACAGGACCATCTCGGAGGTGACGTCTTCCCTTGGGGACGCTGCAGGGCAAGTCCTCTCGTCCTaGTGTTCAGGCAACCCTGGT +
Preference number: 4 (lower is better)
Translates to: LDNRTISEVTSSLGDAAGQVLSS*CSGNPG
Trigger: ACCAGGGTTGCCTGAACACCAGGACGAGAGGACTTG...CCCTGCAGCGTCCCCAAGGGAAGACGTCACCTCCGAGATGGTCCTGTTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR CCA 90 bp GGACAACAGGACCATCTCGGAGGTGACGTCTTCCCTTGGGGACGCTGCAGGGTTGGACACTGGTTAGTCTaGGATGCAGGGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQQDHLGGDVFPWGRCRVGHWLV*DAGESW
Trigger: CCAGCTCTCCCCTGCATCCCAGACTAACCAGTGTCC...AACCCTGCAGCGTCCCCAAGGGAAGACGTCACCTCCGAGATGGTCCTGTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR TCA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTATTGCGTGGCGGTCGTaGCTCTTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCIAWRS*LFSSSF
Trigger: GAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAAT...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGATTGCGTGGCGGTCGTaGCTCTTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVIAWRS*LFSSSF
Trigger: GAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAAT...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACGCTTGGGCCAAGTACTaGGCCTCAAACAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDAWAKY*ASNRAM
Trigger: CATTGCCCTGTTTGAGGCTCAGTACTTGGCCCAAGC...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp GCTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGGCCTCTTCTCCACGCTaGTGGCGTCGATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: AANQSVTWTSKPSVGVWVASSPR*WRRSRC
Trigger: GCACCGAGATCGACGCCATCAGCGTGGAGAAGAGGC...CACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGGCTTGTCCTGCATCTTaGTGGTCTCCCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVACPAS*WSPSQR
Trigger: CCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGC...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCACCTTGCGAACGTCCCTaGTTTTCCGGCGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: AALTFPPLLSPPACGPVAPCERP*FSGAAQ
Trigger: TTGAGCTGCGCCGGAAAATCAGGGACGTTCGCAAGG...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TCTGAGGGCAATGAGGACGGTTTGCAGAGAGGACACTGGTTAGTCTGGGATGCAAGGGTTCACAGGCCATaGGCCTCGGAGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SEGNEDGLQRGHWLVWDARVHRP*ASESQA
Trigger: GGCCTGGCTCTCCGAGGCTCATGGCCTGTGAACCCT...TGCATCCCAGACTAACCAGTGTCCTCTCTGCAAACCGTCCTCATTGCCCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR GCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTCTGCAGCACTGATTTaGCCTTCCGGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFSAALI*PSGDEV
Trigger: AACTTCATCCCCGGAAGGGCAAATCAGTGCTGCAGA...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp AGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCCTGTGACCTGGCCCATTTaGTCCGACGGGCCTAAGACT +
Preference number: 4 (lower is better)
Translates to: SCQGTLKHRCRGRDCHNPVTWPI*SDGPKT
Trigger: AGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCAC...AGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp AGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCCTTGTCAATCTGCCCACTaGTGGCCCAGAGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: SCQGTLKHRCRGRDCHNPCQSAH*WPRGDL
Trigger: CAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACA...AGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTCTCAGCCGGAAGCGGTaGTGGACGCCCATTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSLSRKR*WTPIGS
Trigger: GCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAG...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTGGCCCCCTCCTCGGTaGTGGGCTGCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSWPPPR*WAAGSG
Trigger: ACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTAGCTCCTCCTCCTTCTaGCTGCGCTCGCTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSSSSSF*LRSLEA
Trigger: GGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCT...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp AGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCCTTGGCGTCGATCTCGGTaGAGGCCTCACTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SCQGTLKHRCRGRDCHNPWRRSR*RPHSLL
Trigger: AAGCAGTGAGTGAGGCCTGCACCGAGATCGACGCCA...AGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp TCTGAGGGCAATGAGGACGGTTTGCAGAGAGGACACTGGTTAGTCTGGGATGCATGCGCCTCGTCGCGGTaGTTCATGCCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SEGNEDGLQRGHWLVWDACASSR*FMPTRL
Trigger: CAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCA...TGCATCCCAGACTAACCAGTGTCCTCTCTGCAAACCGTCCTCATTGCCCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR GCA 90 bp ACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTCCAGCACCGCCCTGTaGGCCTCGTCGCGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TVLKCDNMLSCQGTLKHRSSTAL*ASSRCF
Trigger: GAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGA...GCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCATGGGTGGTGAGCTTCTaGAGCAGTGTGGCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: AALTFPPLLSPPACGPVAWVVSF*SSVASV
Trigger: GACGGAAGCCACACTGCTGCAGAAGCTCACCACCCA...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGTCTCGATCAGGATCGTaGGCCGGGAGATCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVSRSGS*AGRSRS
Trigger: AGAGCGAGATCTCCCGGCGCACGATCCTGATCGAGA...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGACCGCCTTGCCATCGTaGTCGTCGATCAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVTALPS*SSISLL
Trigger: GAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGT...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CTGCTGCACCTCATAGAGATTCACCCCCAGCTCCTGCCGCTGGGCTCGGCTCTGTTGGGAGCACTGATTTaGCCTTCCGGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLHLIEIHPQLLPLGSALLGALI*PSGDEV
Trigger: AACTTCATCCCCGGAAGGGCAAATCAGTGCTCCCAA...CAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCTCTATGAGGTGCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp CCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGAGAGGACACAGGGAGAGGAGCCCTTaGCCGGCCACAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PKGSHVSEGNEDGLQRGHRERSP*PATAGS
Trigger: AGAGCCAGCTGTGGCCGGGCAAGGGCTCCTCTCCCT...GTGTCCTCTCTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR CCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCATTGCAGCTTCCGCTTaGGTTGTGACTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFIAASA*VVTSSG
Trigger: TCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAAT...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTTCTCTGGATTCTGGTaGACCGGTGGCCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDFSGFW*TGGLLL
Trigger: CAGCAAGAGGCCACCGGTCCACCAGAATCCAGAGAA...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCCTTTCTCTGGATTCTaGTGGACCGGTGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAPFSGF*WTGGLL
Trigger: CAAGAGGCCACCGGTCCACCAGAATCCAGAGAAAGG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCGGGAGCACCTGCCCCTaGGGCTCCTCTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERGSTCP*GSSVDP
Trigger: AGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCC...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTAGCCGGAAGCGGTGCTaGACGCCCATTGGGAGCACC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSSRKRC*TPIGST
Trigger: GGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCT...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTCGATGTCGCTCCCGTaGCTCAGCCGGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSSMSLP*LSRKRC
Trigger: GCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGCTGGATCTGGTCCTaGAACACTGGCAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDCWIWS*NTGRSP
Trigger: AGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCA...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGCCCCCTCCTCGGTGCTaGGCTGCTGGATCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLPPPRC*AAGSGP
Trigger: AGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGG...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp CTCCTGCCGCTGGGCTCGGCTCTGCTTGGTAGCCACAACCAGCTCTTGGAGGTCGCCACAACCAGCTCTTaGAGGTCCAGCTTCAACTTT +
Preference number: 4 (lower is better)
Translates to: LLPLGSALLGSHNQLLEVATTSS*RSSFNF
Trigger: AAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGC...GACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCCCCAGCTCCTGCCGCTaGGCTCGGCTCTGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFPSSCR*ARLCLV
Trigger: TACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGG...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTCCCAGCTCCTGCCGCTaGGCTCGGCTCTGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LQTKVLPGRVSPVWECGCPSSCR*ARLCLV
Trigger: TACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGG...ACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTGCTCGAGTGGTGAGCTaGTCCACATACAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCARVVS*STYRSC
Trigger: GCAGGACCTGTATGTGGACCAGCTCACCACTCGAGC...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCGCAGCCAGGTCACCTaGGCCTGGACCGCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERARSQVT*AWTALP
Trigger: TGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCTGCG...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGTCAAGCTGCTTGTGGTaGAAGTCGGTGCGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVSSCLW*KSVRVS
Trigger: GCTCACCCGCACCGACTTCCACCACAAGCAGCTTGA...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCCGCTTGTCCAGGCGCTaGCGCTCCAGCACTAGGGAC +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERRLSRR*RSSTRD
Trigger: GTCCCTAGTGCTGGAGCGCCAGCGCCTGGACAAGCG...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGCGTAGTCCCTTGGTGTaGACGCCCCAGCGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTRSPLV*TPQRAL
Trigger: AAGAGCACGCTGGGGCGTCCACACCAAGGGACTACG...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp AGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCCTCTTCCGCTTGGGTTGTaGCTTCCTCAGGATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCQGTLKHRCRGRDCHNPLPLGL*LPQDAL
Trigger: CAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAG...AGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCTGCTGGCCCAGAGGTaGCCTGGCCCATTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHLLAQR*PGPFAP
Trigger: CGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAG...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp GCTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGGCTCCTGTGTCACCTTaGCCATCTCCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AANQSVTWTSKPSVGVWVAPVSP*PSPAAG
Trigger: GCCTGCAGCAGGAGATGGTCAAGGTGACACAGGAGC...CACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCACCTCGGCCTGGGTGGTaGCGGTCTCTCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLAPRPGW*RSLCGQ
Trigger: TTGCCCGCAGAGAGACCGTCACCACCCAGGCCGAGG...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGGGGCCCCAAGCCGGGTaGGGTCGGCCTCGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: KLQRSPKVIGTWKSREKEGPQAG*GRPRVC
Trigger: ACACACTCGAGGCCGACCTCACCCGGCTTGGGGCCC...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCTCCCCCTCTTCAATTaGAGCTTCCGCTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSALPLFN*SFRLGC
Trigger: ACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCGGACTCCACTCTCTCTaGCATGGCCCCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFGLHSL*HGPLLG
Trigger: ACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCC...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGGGACCCTTCGTCTTCTaGTTCCTCGTCACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLGPFVF*FLVTPL
Trigger: GAGGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCC...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTCCTCCTCCTTCTGCCTaGGCTCGCTCGAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSPPPSA*ARSRPL
Trigger: CAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGG...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGCTGCTGGCCCATTGCTaGATGATGCGCCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLLLAHC*MMRLFS
Trigger: GGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAG...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TGTTTGCAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGCGTCGCGGTGCTTCATaGCCACCAGGCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CLQPKGSHVSEGNEDGLQRRGAS*PPGCWP
Trigger: GGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACG...CTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTGCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR GCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCCTCTGCAGGGCCACCTaGTTGGTCAGGCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERLCRAT*LVRHWV
Trigger: CACCCAGTGCCTGACCAAGCAGGTGGCCCTGCAGAG...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGTGCTGCTTCAGCAGCTaGCCGAGCCTGACCTTCATC +
Preference number: 4 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLCCFSS*PSLTFI
Trigger: GATGAAGGTCAGGCTCGGGCAGCTGCTGAAGCAGCA...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGTTCACAGCCTGCAGGTaGTTAAGGCGTGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVFTACR*LRRVCR
Trigger: CCTGCAGACACGCCTTAAGCACCTGCAGGCTGTGAA...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCAAGTCCTAGCATTGGGGCAGGAGGAAAAAGACACCCAAGTGGGCAGATGGCCGAGAGCCAGGCCAGGTaGTGGACCCTCAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SSPSIGAGGKRHPSGQMAESQAR*WTLREN
Trigger: GTTCTCTCTGAGGGTCCAGCACCTGGCCTGGCTCTC...GGCCATCTGCCCACTTGGGTGTCTTTTTCCTCCTGCCCCAATGCTAGGACTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGATCCATCTTCCGGATaGGACCGGCCCGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTDPSSG*DRPAAP
Trigger: CGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGCCGGTGGCCTCTTGCTaGAAGCCTTGGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLPVASC*KPWRPA
Trigger: GGCTGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGG...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTATTCTGGTGGACCGGTaGCCTCTTGCTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCILVDR*PLAGSL
Trigger: AAGGCTTCCAGCAAGAGGCCACCGGTCCACCAGAAT...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGTGCTGGACGCCCATTaGGAGCACCTGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSVLDAH*EHLPLG
Trigger: CCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCAC...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTTCCAAAACCACCAGCTaGGACCCTTCGTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSASKTTS*DPSSSA
Trigger: AGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGA...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCTTACCATCAGGGGGTaGTCTGGGTCCAAAACCACC +
Preference number: 4 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCLTIRG*SGSKTT
Trigger: GGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAG...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTTTCTTCAGGGCAGCCTaGAATCTTACCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAFFRAA*NLTIRG
Trigger: CCCCCTGATGGTAAGATTCCAGGCTGCCCTGAAGAA...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp TCCTATGGGTGGGGCTGGCTTATTTCTCTTAAACGATGCCCTTCTGAGGGTACACGGCTGCGCAGGTCTTaGTGTAGAGAGCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: SYGWGWLISLKRCPSEGTRLRRS*CRERGR
Trigger: CCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCG...TGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATTCTTCTTCCAGTTGCTaGGCTCGAGTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNSSSSC*ARVVSW
Trigger: CCAGCTCACCACTCGAGCCCAGCAACTGGAAGAAGA...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGTCTTCTTCCAGTTGCTaGGCTCGAGTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVSSSSC*ARVVSW
Trigger: CCAGCTCACCACTCGAGCCCAGCAACTGGAAGAAGA...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGCAACCGCCAACTCCATaGCACGGATCATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVQPPTP*HGSSSP
Trigger: AGGAGAAGATGATCCGTGCCATGGAGTTGGCGGTTG...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCCGCTGCCCCTCGGCCTaGGTGGTGACGGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSRCPSA*VVTVSL
Trigger: CAGAGAGACCGTCACCACCCAGGCCGAGGGGCAGCG...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGGCACTAGGGACTGCTTaGAGCGGAACAGGAACACGT +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVALGTA*SGTGTR
Trigger: ACGTGTTCCTGTTCCGCTCCAAGCAGTCCCTAGTGC...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGCAGCTTGTGGACCTGTaGCAGCGTTGTGTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVQLVDL*QRCVVR
Trigger: TCTCACAACACAACGCTGCCACAGGTCCACAAGCTG...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTCAGCCCACCAGCTTGTaGACCTGTGGCAGCGTTGTG +
Preference number: 4 (lower is better)
Translates to: SVLTLLRVSGATDFLLQAQPTSL*TCGSVV
Trigger: CACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTG...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCAAGTCCTAGCATTGGGGCAGGAGGAAAAAGACACCCAAGTGGGCAGATGGCCGGCCACAGCTGGCTCTaGTTCCTCGACCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: SSPSIGAGGKRHPSGQMAGHSWL*FLDLHL
Trigger: CAGATGCAGGTCGAGGAACCAGAGCCAGCTGTGGCC...GGCCATCTGCCCACTTGGGTGTCTTTTTCCTCCTGCCCCAATGCTAGGACTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR TCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGTCTCCAGGCAGTTCCTaGGGAGGACTGAAATACGGG +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTSPGSS*GGLKYG
Trigger: CCCGTATTTCAGTCCTCCTCAGGAACTGCCTGGAGA...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTGAACTCCTCCAGGTCTaGGGACTCGATGTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSELLQV*GLDVAP
Trigger: GGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTC...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR TCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCCATCTCCTGGTTGTGTaGCTGCTGCTGGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFHLLVV*LLLAAW
Trigger: CCAGGCAGCCAGCAGCAGTCACACAACCAGGAGATG...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR TCA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCGCGCCTGGCCAGAAATaGGTATGGTTAATCCAATAT +
Preference number: 4 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFAPGQK*VWLIQY
Trigger: ATATTGGATTAACCATACTCATTTCTGGCCAGGCGC...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTCTGCAGCACTGATTTaGCCTTCCGGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDSAALI*PSGDEV
Trigger: AACTTCATCCCCGGAAGGGCAAATCAGTGCTGCAGA...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGTCTGCAGCACTGATTTaGCCTTCCGGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVSAALI*PSGDEV
Trigger: AACTTCATCCCCGGAAGGGCAAATCAGTGCTGCAGA...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGGCTAACACTATCGTATaGCTCCTCTCCAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVANTIV*LLSRQF
Trigger: GAACTGCCTGGAGAGGAGGCATACGATAGTGTTAGC...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCGGACCGGTGGCCTCTTaGTGGAAGCCTTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFGPVAS*WKPWRP
Trigger: TGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCC...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCACCCATTGGGAGCACCTaGCCCTGGGGCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLAPIGST*PWGSSV
Trigger: CACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGG...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCACTCAGCCGGAAGCGGTaGTGGACGCCCATTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLALSRKR*WTPIGS
Trigger: GCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAG...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TGCTTGGTAGCCACAACCAGCTCTTGGAGGTCCAGCTTCAACTTTTCGATCTGTCTCAGCCGGAAGCGGTaGTGGACGCCCATTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CLVATTSSWRSSFNFSICLSRKR*WTPIGS
Trigger: GCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAG...ACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCGGGATCACTGGCTCCTaGGAGACGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFGITGS*ETNSSR
Trigger: CCTGGAGGAGTTCGTCTCGCAGGAGCCAGTGATCCC...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCCTCGGTGCTGGGCTaGTGGATCTGGTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFSSVLG*WIWSWN
Trigger: GTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGA...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGTTCTCCAGCAGCTTCTaGAGGTGTACCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTFSSSF*RCTRCC
Trigger: GCAGCACCTGGTACACCTGCAGAAGCTGCTGGAGAA...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGCTCGCTCGAGGCCATTaGGTGGCGGTCGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLLARGH*VAVVTL
Trigger: AAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAG...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTCTCGCTCGAGGCCATTaGGTGGCGGTCGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSLARGH*VAVVTL
Trigger: AAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAG...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAAGCTCCTCCTCCTTCTaGCTGCGCTCGCTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLASSSSF*LRSLEA
Trigger: GGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCT...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTTTTCTTCTCGATTTCTaGCCGGATCCTCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAFLLDF*PDPLRL
Trigger: GAGACGGAGAGGATCCGGGCAGAAATCGAGAAGAAA...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCGTCGCGGTGCTTCATaGCCACCAGGCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTRRGAS*PPGCWP
Trigger: GGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGATCATCTTCTCCTGCTaGTTCAGCAGCTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLIIFSC*FSSCPS
Trigger: GCTCGGGCAGCTGCTGAAGCAGCAGGAGAAGATGAT...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GCTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGCCCTCCTTCACAGCCTaGAGGTGCTTAAGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: AANQSVTWTSKPSVGVWVPSFTA*RCLRRV
Trigger: GACACGCCTTAAGCACCTGCAGGCTGTGAAGGAGGG...CACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGTCCAGCACTAGGGACTaGTTGGAGCGGAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLSSTRD*LERNRN
Trigger: GTTCCTGTTCCGCTCCAAGCAGTCCCTAGTGCTGGA...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGATTGCAGCTTCCGCTTaGGTTGTGACTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVIAASA*VVTSSG
Trigger: TCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAAT...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTCCGTGGGATGGCTCTaGGGAGGTGACCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSSVGWL*GGDPPF
Trigger: GAAAGGAGGGTCACCTCCCCAGAGCCATCCCACGGA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACGGGCCTAAGACTCCGTaGGATGGCTCTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHGPKTP*DGSGEV
Trigger: CACCTCCCCAGAGCCATCCCACGGAGTCTTAGGCCC...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCTCGATGTCGCTCCCGTaGCTCAGCCGGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSSMSLP*LSRKRC
Trigger: GCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGA...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GCTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTCGGTGCTGGGCTGCTaGATCTGGTCCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: AANQSVTWTSKPSVGVWVSVLGC*IWSWNT
Trigger: AGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGA...CACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCCTTCCAAAACCACCAGCTaGGACCCTTCGTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SCQGTLKHRCRGRDCHNPSKTTS*DPSSSA
Trigger: AGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGA...AGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATTTCTTCAGGGCAGCCTaGAATCTTACCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNFFRAA*NLTIRG
Trigger: CCCCCTGATGGTAAGATTCCAGGCTGCCCTGAAGAA...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTGCCACAACCAGCTCTTaGAGGTCCAGCTTCAACTTT +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAATTSS*RSSFNF
Trigger: AAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGC...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CACAACCAGCTCTTGGAGGTCCAGCTTCAACTTTTCGATCTGTCGGTTCAGGTACCCAGCTCCTGCCGCTaGGCTCGGCTCTGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: HNQLLEVQLQLFDLSVQVPSSCR*ARLCLV
Trigger: TACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGG...TACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGTTTTGCGCTCCTCGTTaGCGGCTGCGCAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLFCAPR*RLRRSW
Trigger: CCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAA...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGCTCGAGTGGTGAGCTaGTCCACATACAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SVLTLLRVSGATDFLLQAARVVS*STYRSC
Trigger: GCAGGACCTGTATGTGGACCAGCTCACCACTCGAGC...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTAGGAAAAGCATCTCCTaGTTGTGTGACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSARKSIS*LCDCCW
Trigger: CCAGCAGCAGTCACACAACCAGGAGATGCTTTTCCT...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp GCTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGGCTTCTGCAGCAGTGTaGCTTCCGTCTCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: AANQSVTWTSKPSVGVWVASAAV*LPSLSG
Trigger: ACCGGACAGAGACGGAAGCCACACTGCTGCAGAAGC...CACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCACCAGCTCGCCCTGGATaGCTTGGCGGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLAPARPG*LGGWPA
Trigger: TGCAGGCCATCCGCCAAGCCATCCAGGGCGAGCTGG...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCGCAGCCAGGTCACCTaGGCCTGGACCGCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTRSQVT*AWTALP
Trigger: TGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCTGCG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCATTCTCCTCGCTGAGCTaGTTCAGCTTGTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: AALTFPPLLSPPACGPVAFSSLS*FSLSCI
Trigger: GATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAA...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGCTGACCTTCATCCTGTaGATCTCGCCCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLLTFIL*ISPFMA
Trigger: GGCCATGAAGGGCGAGATCCACAGGATGAAGGTCAG...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCTATGGGTGGGGCTGGCTTATTTCTCTTAAACGATGCCCTTCTGAGGGTACAAGGGCCTCCTGGAACTaGGGGTACTCGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: SYGWGWLISLKRCPSEGTRASWN*GYSSRT
Trigger: CGTGCGGGACGAGTACCCCCAGTTCCAGGAGGCCCT...TGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCTCTGTCTTTGCGATaGGATGCCATGGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: AALTFPPLLSPPACGPVAALSLR*DAMGNA
Trigger: AGCGTTTCCCATGGCATCCCATCGCAAAGACAGAGC...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAATGGGGCGTAGTCCCTTaGTGTGGACGCCCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SKSLMTNTIPDLFLEALQWGVVP*CGRPSV
Trigger: CACGCTGGGGCGTCCACACCAAGGGACTACGCCCCA...TTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp GACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACGTTCCTGAGGAGGACTaGAATACGGGTAAGTCGTAT +
Preference number: 4 (lower is better)
Translates to: DNMLSCQGTLKHRCRGRDVPEED*NTGKSY
Trigger: ATACGACTTACCCGTATTTCAGTCCTCCTCAGGAAC...GTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAACTGCTGGCCCAGAGGTaGCCTGGCCCATTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGELLAQR*PGPFAP
Trigger: CGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAG...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp GGTCCAGCTTCAACTTTTCGATCTGTCGGTTCAGGTAGTTCTTCAGGGCAGCCTGAACTCCTCCAGGTCTaGGGACTCGATGTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: GPASTFRSVGSGSSSGQPELLQV*GLDVAP
Trigger: GGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTC...AGGCTGCCCTGAAGAACTACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR TCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCATTGCGTGGCGGTCGTaGCTCTTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFIAWRS*LFSSSF
Trigger: GAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAAT...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR TCA 90 bp TTGCAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGAGAGCCTCTTCTCCACGCTaGTGGCGTCGATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: LQPKGSHVSEGNEDGLQRASSPR*WRRSRC
Trigger: GCACCGAGATCGACGCCATCAGCGTGGAGAAGAGGC...TCTCTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR TCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCCGCTGCCGGGGGCGTaGCTGTCACAATCCTACTTA +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHPLPGA*LSQSYL
Trigger: TAAGTAGGATTGTGACAGTCACGCCCCCGGCAGCGG...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGCTTGCTCAGCCTTTTaGTTTCAAGCTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SVLTLLRVSGATDFLLQAACSAF*FQAPGA
Trigger: GGCCCCTGGAGCTTGAAATCAAAAGGCTGAGCAAGC...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCCAGGATGGTGGCGATaGGAGCCAGTCGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERAPGWWR*EPVACP
Trigger: TGGACAAGCGACTGGCTCTCATCGCCACCATCCTGG...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTAGGAGGGCCCTGGTaGCTCGAGCTTGTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERALGGPW*LELVGD
Trigger: ATCGCCAACAAGCTCGAGTCACCAGGGCCCTCCTAG...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGCCTCAGGATGCTCTGTaGTACCGACAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTPQDAL*YRQLLH
Trigger: GTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGG...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp AGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCCTGCTAACACTATCGTATaGCTCCTCTCCAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SCQGTLKHRCRGRDCHNPANTIV*LLSRQF
Trigger: GAACTGCCTGGAGAGGAGGCATACGATAGTGTTAGC...AGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTGTCAATCTGCCCACTaGTGGCCCAGAGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSCQSAH*WPRGDL
Trigger: CAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCTCAGCCGGAAGCGGTaGTGGACGCCCATTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTLSRKR*WTPIGS
Trigger: GCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACGGGATCACTGGCTCCTaGGAGACGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHGITGS*ETNSSR
Trigger: CCTGGAGGAGTTCGTCTCGCAGGAGCCAGTGATCCC...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGGGACCCTTCGTCTTCTaGTTCCTCGTCACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLGPFVF*FLVTPL
Trigger: GAGGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCC...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp TGCTTGGTAGCCACAACCAGCTCTTGGAGGTCCAGCTTCAACTTTTCGATCTGTCGCTGGGCTCGGCTCTaGTTGGTAGCCACAACCAGC +
Preference number: 4 (lower is better)
Translates to: CLVATTSSWRSSFNFSICRWARL*LVATTS
Trigger: GCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCG...ACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACGAGCCGCCAACTTTTTaGGCTCCTCGTTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHEPPTF*APRWRL
Trigger: CAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTC...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTTTCTCCATCTCAGTCTaGAGAGCCGCCAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAFSISV*RAANFL
Trigger: CAAAAAGTTGGCGGCTCTGCAGACTGAGATGGAGAA...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTGCGCCTCGTCGCGGTaGTTCATGCCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTCASSR*FMPTRL
Trigger: CAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCCACGTGCCACCACAGTaGCCGGCTTTTTCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFHVPPQ*PAFSFR
Trigger: GCGGAAAGAAAAAGCCGGGCACTGTGGTGGCACGTG...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTCTCCCAGGCTAGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSSPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCTAGCCTGGGAGA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCGCTTGGCGGATGGCCTaGAACTCCTCCGTGAGTATC +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERAWRMA*NSSVSI
Trigger: GATACTCACGGAGGAGTTGCAGGCCATCCGCCAAGC...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGTGCTTAAGGCGTGTCTaGAGGGCCACGATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTCLRRV*RATISE
Trigger: TTCAGAGATCGTGGCCCTGCAGACACGCCTTAAGCA...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGCACAGGCTCTGTCTTTaGGATGGGATGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTHRLCL*DGMPWE
Trigger: TTCCCATGGCATCCCATCGCAAAGACAGAGCCTGTG...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCCCGGTGGCCTCTTGCTaGAAGCCTTGGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSPVASC*KPWRPA
Trigger: GGCTGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGG...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGTCCGTGGGATGGCTCTaGGGAGGTGACCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERASVGWL*GGDPPF
Trigger: GAAAGGAGGGTCACCTCCCCAGAGCCATCCCACGGA...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGAGCCGGAAGCGGTGCTaGACGCCCATTGGGAGCACC +
Preference number: 4 (lower is better)
Translates to: KLQRSPKVIGTWKSREKESRKRC*TPIGST
Trigger: GGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCT...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTCGATGTCGCTCCCGTaGCTCAGCCGGAAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTSMSLP*LSRKRC
Trigger: GCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGTCGGTGCTGGGCTGCTaGATCTGGTCCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLSVLGC*IWSWNT
Trigger: AGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGA...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCGGTGCTGGGCTGCTaGATCTGGTCCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFSVLGC*IWSWNT
Trigger: AGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGA...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGCATCAGGGGGTGGTCTaGGTCCAAAACCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLHQGVV*VQNHQL
Trigger: CAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATG...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCCATCAGGGGGTGGTCTaGGTCCAAAACCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERHQGVV*VQNHQL
Trigger: CAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATG...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGTTTTGCGCTCCTCGTTaGCGGCTGCGCAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERAFCAPR*RLRRSW
Trigger: CCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAA...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCCAGCTCGCCCTGGATaGCTTGGCGGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTPARPG*LGGWPA
Trigger: TGCAGGCCATCCGCCAAGCCATCCAGGGCGAGCTGG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAAAGCTCCAGCTCGCCCTaGATGGCTTGGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGESSSSP*MAWRMA
Trigger: GGCCATCCGCCAAGCCATCCAGGGCGAGCTGGAGCT...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCAGCTCAAGCTGCTTGTaGTGGAAGTCGGTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERSSSCL*WKSVRV
Trigger: CACCCGCACCGACTTCCACCACAAGCAGCTTGAGCT...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGTGCGATGGGATGCCATaGGAAACGCTAGGATTTTAC +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVCDGMP*ETLGFY
Trigger: GTAAAATCCTAGCGTTTCCCATGGCATCCCATCGCA...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTCGAGTAAGCCCAGTGTaGGAGTGTGGGTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LQTKVLPGRVSPVWECGCRVSPV*ECGCVG
Trigger: ACCCACACACCCACACTCCCACACTGGGCTTACTCG...ACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CCTAGCATTGGGGCAGGAGGAAAAAGACACCCAAGTGGGCAGATGGCCAAGTCCTTGCAGAGAGGACACTaGTTAGTCTGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: PSIGAGGKRHPSGQMAKSLQRGH*LVWDAG
Trigger: CCCTGCATCCCAGACTAACCAGTGTCCTCTCTGCAA...GGACTTGGCCATCTGCCCACTTGGGTGTCTTTTTCCTCCTGCCCCAATGCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571028.1
3UTR CAA 72 bp CTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTaGAAACACCGCTGCCGGGGGCGTGACTGTCACAAT +
Preference number: 4 (lower is better)
Translates to: LKCDNMLSCQGT*KHRCRGRDCHN
Trigger: ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTCTCCAGGCAGTTCCTaGGGAGGACTGAAATACGGG +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSSPGSS*GGLKYG
Trigger: CCCGTATTTCAGTCCTCCTCAGGAACTGCCTGGAGA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR TCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCGCTTGGGCCAAGTACTaGGCCTCAAACAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERAWAKY*ASNRAM
Trigger: CATTGCCCTGTTTGAGGCTCAGTACTTGGCCCAAGC...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCATGGCCCATTGCTGCATaGTGCGCCTCTTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLAWPIAA*CASSPR
Trigger: GCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCA...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TGTTTGCAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGTGGCCCATTGCTGCATaGTGCGCCTCTTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: CLQPKGSHVSEGNEDGLQWPIAA*CASSPR
Trigger: GCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCA...CTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTGCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR TCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTTAAAGCTCAGCGGGTaGGACACGTGCCACCACAGT +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSLKLSG*DTCHHS
Trigger: ACTGTGGTGGCACGTGTCTCACCCGCTGAGCTTTAA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR TCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGCCTGCAACTCCTCCGTaGGTATCATTTGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTPATPP*VSFVPA
Trigger: AGCTGGAACAAATGATACTCACGGAGGAGTTGCAGG...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAATGCTGCTGGTGTGTGTaGTGTCCAGGGTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SKSLMTNTIPDLFLEALQCCWCV*CPGWSG
Trigger: CCCAGACCACCCTGGACATCACACACACCAGCAGCA...TTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGTGGCGATCATCTGGCTaGCCTTGTGCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMWRSSG*PCAGPP
Trigger: AGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCA...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTCTCTTCCCCTTCCACTaGTGCTTCCCCTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSLFPFH*CFPFCL
Trigger: GAGACAGAAGGGGAAGCAGCAGTGGAAGGGGAAGAG...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGGTGACCTGGCCCATTTaGTCCGACGGGCCTAAGACT +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERAVTWPI*SDGPKT
Trigger: AGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCAC...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CACAACCAGCTCTTGGAGGTCCAGCTTCAACTTTTCGATCTGTCGGTTCAGGTAGGGATCACTGGCTCCTaGGAGACGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HNQLLEVQLQLFDLSVQVGITGS*ETNSSR
Trigger: CCTGGAGGAGTTCGTCTCGCAGGAGCCAGTGATCCC...TACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp TCCTATGGGTGGGGCTGGCTTATTTCTCTTAAACGATGCCCTTCTGAGGGTACATCCTCGGTGCTGGGCTaGTGGATCTGGTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SYGWGWLISLKRCPSEGTSSVLG*WIWSWN
Trigger: GTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGA...TGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTTCTCCAGCAGCTTCTaGAGGTGTACCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSFSSSF*RCTRCC
Trigger: GCAGCACCTGGTACACCTGCAGAAGCTGCTGGAGAA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCACTCGCTCGAGGCCATTaGGTGGCGGTCGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLALARGH*VAVVTL
Trigger: AAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAG...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TGCTTGGTAGCCACAACCAGCTCTTGGAGGTCCAGCTTCAACTTTTCGATCTGTCTCGCTCGAGGCCATTaGGTGGCGGTCGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: CLVATTSSWRSSFNFSICLARGH*VAVVTL
Trigger: AAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAG...ACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR GCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAACCTCCTCCTTCTGCCTaGGCTCGCTCGAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGEPPPSA*ARSRPL
Trigger: CAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGG...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCTATGGGTGGGGCTGGCTTATTTCTCTTAAACGATGCCCTTCTGAGGGTACACTCCTCGTTGGCGGCTaGGCAGGTCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: SYGWGWLISLKRCPSEGTLLVGG*AGLGVE
Trigger: CTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAG...TGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GCTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGATGTCTTCTTCCAGTTaGTGGGCTCGAGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: AANQSVTWTSKPSVGVWVMSSSS*WARVVS
Trigger: GCTCACCACTCGAGCCCAGCAACTGGAAGAAGACAT...CACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGTGGCGTCGATCTCGGTaGAGGCCTCACTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERAWRRSR*RPHSLL
Trigger: AAGCAGTGAGTGAGGCCTGCACCGAGATCGACGCCA...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp ACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCAGGCTGCTGGCCCATTaGTGCATGATGCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TVLKCDNMLSCQGTLKHRRLLAH*CMMRLF
Trigger: GAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCT...GCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACACTTTGAAACACCGCTaGCGGGGGCGTGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHTLKHR*RGRDCH
Trigger: GTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGT...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGTTGACCATCTCCTGCTaGAGGCGCAGCCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMLTISC*RRSQVT
Trigger: GGTGACCTGGCTGCGCCTGCAGCAGGAGATGGTCAA...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCACGGCGCAGCTCAAGCTaGTTGTGGTGGAAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLARRSSS*LWWKSV
Trigger: CACCGACTTCCACCACAAGCAGCTTGAGCTGCGCCG...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGGAGTGTGTCGAAGTCTaGCTGAATCACCGACAGCTT +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTECVEV*LNHRQL
Trigger: AAGCTGTCGGTGATTCAGGCAGACTTCGACACACTC...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCGTGGACGCCCCAGCGTaGTCTTATTTCAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERVDAPA*SYFSAH
Trigger: GTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCAC...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTTCTCTGGATTCTGGTaGACCGGTGGCCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFFSGFW*TGGLLL
Trigger: CAGCAAGAGGCCACCGGTCCACCAGAATCCAGAGAA...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGCCTTTCTCTGGATTCTaGTGGACCGGTGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLPFSGF*WTGGLL
Trigger: CAAGAGGCCACCGGTCCACCAGAATCCAGAGAAAGG...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGTGCTGGACGCCCATTaGGAGCACCTGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRVLDAH*EHLPLG
Trigger: CCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCAC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCGGCATCGGGCACCCCTaGGGGGATCACTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSGIGHP*GDHWLL
Trigger: CAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCC...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGCAGGTCTCCTTCCCTaGGGTGGGCATCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRAGLLP*GGHRAP
Trigger: GGGTGCCCGATGCCCACCCCAGGGAAGGAGACCTGC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TCCTATGGGTGGGGCTGGCTTATTTCTCTTAAACGATGCCCTTCTGAGGGTACACTGGGCTGCTGGATCTaGTCCTGGAACACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SYGWGWLISLKRCPSEGTLGCWI*SWNTGR
Trigger: CCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAG...TGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTCAGGCTAGAGTGCAGTaGCGTGATCTCGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSQARVQ*RDLGSL
Trigger: TAGTGAGCCGAGATCACGCCACTGCACTCTAGCCTG...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTCGCCCTGGATGGCTTaGCGGATGGCCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTSPWMA*RMACNS
Trigger: GGAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAATCGCCCTGGATGGCTTaGCGGATGGCCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGESPWMA*RMACNS
Trigger: GGAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGA...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGATTTGGTGGTCTTGTTaGAGGTCATGTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVIWWSC*RSCAPA
Trigger: TGCAGGAGCACATGACCTCCAACAAGACCACCAAAT...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGATGTCCAGGGTGGTCTaGGCAATGTCACCGTTGATT +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTMSRVV*AMSPLI
Trigger: AATCAACGGTGACATTGCCCAGACCACCCTGGACAT...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGTCCACCAGGGTCTTCTaGTGTGCGTCCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMSTRVF*CASSLL
Trigger: CAGCAGGCTGGACGCACACCAGAAGACCCTGGTGGA...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTACTTTCTTCACGTCCTaGTCCAGCTCCACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LQTKVLPGRVSPVWECGCTFFTS*SSSTRV
Trigger: GACCCTGGTGGAGCTGGACCAGGACGTGAAGAAAGT...ACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGTTCTGCTCCATGATGTaGAGCTCCTTCTTGGATGCG +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTFCSMM*SSFLDA
Trigger: CGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAA...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GCTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTGGAGAAAAGATAGGTaGGCAGACTGGGGCGTAGTC +
Preference number: 4 (lower is better)
Translates to: AANQSVTWTSKPSVGVWVWRKDR*ADWGVV
Trigger: GACTACGCCCCAGTCTGCCCACCTATCTTTTCTCCA...CACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGAGGGAGAAAGAGCGCTaGGTTAATGATGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVREKER*VNDGEK
Trigger: CTTTTCTCCATCATTAACCCAGCGCTCTTTCTCCCT...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACTCTCCAGGCAGTTCCTaGGGAGGACTGAAATACGGG +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHSPGSS*GGLKYG
Trigger: CCCGTATTTCAGTCCTCCTCAGGAACTGCCTGGAGA...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGCTGGGCTCGAGTGGTaGGCTGGTCCACATACAGGT +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTAGLEW*AGPHTG
Trigger: ACCTGTATGTGGACCAGCTCACCACTCGAGCCCAGC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGGCTGGGCTCGAGTGGTaGGCTGGTCCACATACAGGT +
Preference number: 4 (lower is better)
Translates to: KLQRSPKVIGTWKSREKEAGLEW*AGPHTG
Trigger: ACCTGTATGTGGACCAGCTCACCACTCGAGCCCAGC...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGCTCCTGTGTCACCTTaGCCATCTCCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTAPVSP*PSPAAG
Trigger: GCCTGCAGCAGGAGATGGTCAAGGTGACACAGGAGC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGATGGGGGTGCTCTCTaGGCCCTTCTGTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTDGGAL*ALLWCE
Trigger: CTCACACCACAGAAGGGCTCAGAGAGCACCCCCATC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp CCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGAGAGGACACGAGAGAACCTGGCCTTaGCTTTTCTTAAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: PKGSHVSEGNEDGLQRGHERTWP*LFLRPV
Trigger: CACGGGCCTTAAGAAAAGTCAAGGCCAGGTTCTCTC...GTGTCCTCTCTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR GCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGCCTCAGGATGCTCTGTaGTACCGACAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLPQDAL*YRQLLH
Trigger: GTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGG...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTCCTCAGGATGCTCTGTaGTACCGACAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSPQDAL*YRQLLH
Trigger: GTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGG...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCCTCCCCCTCTTCAATTaGAGCTTCCGCTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERLPLFN*SFRLGC
Trigger: ACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAG...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCTCTTCCCCTTCCACTaGTGCTTCCCCTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHLFPFH*CFPFCL
Trigger: GAGACAGAAGGGGAAGCAGCAGTGGAAGGGGAAGAG...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAAGGACCGGTGGCCTCTTaGTGGAAGCCTTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGEGPVAS*WKPWRP
Trigger: TGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCC...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGTGTCAATCTGCCCACTaGTGGCCCAGAGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMCQSAH*WPRGDL
Trigger: CAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACA...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGTGGATCCTGTCAATCTaGCCACTGCTGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMWILSI*PLLAQR
Trigger: CCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCCA...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAAGGGATCACTGGCTCCTaGGAGACGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGEGITGS*ETNSSR
Trigger: CCTGGAGGAGTTCGTCTCGCAGGAGCCAGTGATCCC...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCTCGCTCGAGGCCATTaGGTGGCGGTCGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTLARGH*VAVVTL
Trigger: AAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAGCTCCTCCTCCTTCTaGCTGCGCTCGCTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSSSSF*LRSLEA
Trigger: GGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGATGTCTTCTTCCAGTTaGTGGGCTCGAGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLMSSSS*WARVVS
Trigger: GCTCACCACTCGAGCCCAGCAACTGGAAGAAGACAT...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGCGCCTCGTCGCGGTaGTTCATGCCCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSCASSR*FMPTRL
Trigger: CAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCA...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAGTATCCCAGCGGAATaGCATGTGGTAGAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLSIPAE*HVVERR
Trigger: CCGCCTTTCTACCACATGGCATTCCGCTGGGATACT...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp TCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGCGCGAACGCCCTCGATaGCCCGGGCAGGAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SIFFINRIGTVLKCDNMLRERPR*PGQEAS
Trigger: GGAAGCTTCCTGCCCGGGGCATCGAGGGCGTTCGCG...CAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAACAGGGTCTTCTGGTGTaGGTCCAGCCTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGEQGLLV*VQPAAG
Trigger: ACCAGCAGCAGGCTGGACGCACACCAGAAGACCCTG...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTTGACCATCTCCTGCTaGAGGCGCAGCCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTLTISC*RRSQVT
Trigger: GGTGACCTGGCTGCGCCTGCAGCAGGAGATGGTCAA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCACCGACAGCTTTTCCTaGTTCTCTAGGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERTDSFS*FSRREL
Trigger: CAGCTCCCTCCTAGAGAAGCAGGAAAAGCTGTCGGT...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCAGATTTGGGAGTGCTaGAAACCAAAGTGTTACCTG +
Preference number: 4 (lower is better)
Translates to: RLGRSPLVWTPQRALISVQIWEC*KPKCYL
Trigger: CAGGTAACACTTTGGTTTGCAGCACTCCCAAATCTG...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTGTTGTGAGAGGCACGTaGAGATTTGGGAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LQTKVLPGRVSPVWECGCVVRGT*RFGSAA
Trigger: TGCAGCACTCCCAAATCTGCACGTGCCTCTCACAAC...ACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCCTTTCTCTGGATTCTaGTGGACCGGTGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERAPFSGF*WTGGLL
Trigger: CAAGAGGCCACCGGTCCACCAGAATCCAGAGAAAGG...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTCCGTGGGATGGCTCTaGGGAGGTGACCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTSVGWL*GGDPPF
Trigger: GAAAGGAGGGTCACCTCCCCAGAGCCATCCCACGGA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCACCTGGGGCTCCTCTGTaGATCCTGTCAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLAPGAPL*ILSICP
Trigger: TGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGG...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAGCCGGAAGCGGTGCTaGACGCCCATTGGGAGCACC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSRKRC*TPIGST
Trigger: GGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGCGCCGTCGGTGGATTTaGCTTGATGCTGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMRRRWI*LDAGIL
Trigger: GAGGATGCCAGCATCAAGCCAAATCCACCGACGGCG...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAGCTCCAGCTCGCCCTaGATGGCTTGGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSSSSP*MAWRMA
Trigger: GGCCATCCGCCAAGCCATCCAGGGCGAGCTGGAGCT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCTGTGGAGCTCCTTCTTaGATGCGTCCAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSCGAPS*MRPGRP
Trigger: TGGCCTCCCTGGACGCATCCAAGAAGGAGCTCCACA...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp CTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTTCCAGGTCCTTCATGTaGTGCTCGATCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LQTKVLPGRVSPVWECGCSRSFM*CSISFC
Trigger: GCAGAAGGAGATCGAGCACCACATGAAGGACCTGGA...ACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TTGCAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGAGAGATGCAGGGGAGAGCTaGACAACAGGACCATCTCGG +
Preference number: 4 (lower is better)
Translates to: LQPKGSHVSEGNEDGLQRDAGES*TTGPSR
Trigger: CCGAGATGGTCCTGTTGTCCAGCTCTCCCCTGCATC...TCTCTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR TCA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTTTGCCCTTCCGGGGATaGAGTTTCTGTATAGTAATA +
Preference number: 4 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCLPFRG*SFCIVI
Trigger: TATTACTATACAGAAACTTCATCCCCGGAAGGGCAA...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGCCTCTTCTCCACGCTaGTGGCGTCGATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRASSPR*WRRSRC
Trigger: GCACCGAGATCGACGCCATCAGCGTGGAGAAGAGGC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCATCGGTGGATTTGGCTTaGTGCTGGCATCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLASVDLA*CWHPLS
Trigger: GCTCAGAGGATGCCAGCATCAAGCCAAATCCACCGA...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGGGGCAATGTCACCGTTaGTTTTGGAAAGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLGQCHR*FWKDVS
Trigger: TGACACATCTTTCCAAAATCAACGGTGACATTGCCC...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGTCGCCTTCTCCTCGCTaGGCTGGTTCAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KLQRSPKVIGTWKSREKESPSPR*AGSACP
Trigger: AGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGA...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGTCTGCTTCCACCAGTTaGTTCAGGAGGGTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMSASTS*FRRVAF
Trigger: GAAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGA...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCGATCTCGGAATCCACTaGGGAACGCATCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERDLGIH*GTHLFC
Trigger: GCAAAAGAGATGCGTTCCTCAGTGGATTCCGAGATC...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACGTGACTTCCTCAGGATaGTCTGTGCTACCGACAGCT +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHVTSSG*SVLPTA
Trigger: AGCTGTCGGTAGCACAGAGCATCCTGAGGAAGTCAC...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp TCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAACTCTTCCCCTTCCACTaGTGCTTCCCCTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SKSLMTNTIPDLFLEALQLFPFH*CFPFCL
Trigger: GAGACAGAAGGGGAAGCAGCAGTGGAAGGGGAAGAG...TTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGCGGGTAAGTCGTATCTaGAGCACTGATTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLRVSRI*STDLPF
Trigger: GAAGGGCAAATCAGTGCTGCAGATACGACTTACCCG...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTCGGGTAAGTCGTATCTaGAGCACTGATTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSRVSRI*STDLPF
Trigger: GAAGGGCAAATCAGTGCTGCAGATACGACTTACCCG...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTGCTAACACTATCGTATaGCTCCTCTCCAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSANTIV*LLSRQF
Trigger: GAACTGCCTGGAGAGGAGGCATACGATAGTGTTAGC...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp TCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGCCCATTGGGAGCACCTaGCCCTGGGGCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SIFFINRIGTVLKCDNMLPIGST*PWGSSV
Trigger: CACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGG...CAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGGACCCTTCGTCTTCTaGTTCCTCGTCACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTGPFVF*FLVTPL
Trigger: GAGGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp CGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGTTTCTTCTCGATTTCTaGCCGGATCCTCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: RIGTVLKCDNMLSCQGTLFLLDF*PDPLRL
Trigger: GAGACGGAGAGGATCCGGGCAGAAATCGAGAAGAAA...CAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTGGCGTCGATCTCGGTaGAGGCCTCACTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTWRRSR*RPHSLL
Trigger: AAGCAGTGAGTGAGGCCTGCACCGAGATCGACGCCA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCTCCAGCACCGCCCTGTaGGCCTCGTCGCGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSSSTAL*ASSRCF
Trigger: GAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGA...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCTATGGGTGGGGCTGGCTTATTTCTCTTAAACGATGCCCTTCTGAGGGTACACTGTCCGGTTCAGGATaGTCGCCAGCTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SYGWGWLISLKRCPSEGTLSGSG*SPASRS
Trigger: AGAACGAGAAGCTGGCGAGCATCCTGAACCGGACAG...TGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAGTATTGAACTGGCTCTaGAGGGCCACCTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLAVLNWL*RATCLV
Trigger: GACCAAGCAGGTGGCCCTGCAGAGCCAGTTCAATAC...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAATTGTTGGAGGTCATGTaGTCCTGCAGCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SKSLMTNTIPDLFLEALQLLEVM*SCSFSR
Trigger: CCGGGAGAAGCTGCAGGAGCACATGACCTCCAACAA...TTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGTCTCCTGCTCAATCTTaGTTTCTACTCGTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVSPAQS*FLLVVS
Trigger: AGAAACTACGAGTAGAAAGCAAGATTGAGCAGGAGA...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCCCAGCTCCTCCGAGCTaGACCGGTTTTTATTCATCA +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERPAPPS*TGFYSS
Trigger: TGATGAATAAAAACCGGTGCAGCTCGGAGGAGCTGG...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAATTCTGGTGGACCGGTaGCCTCTTGCTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLAILVDR*PLAGSL
Trigger: AAGGCTTCCAGCAAGAGGCCACCGGTCCACCAGAAT...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCATTCTCTGGATTCTGGTaGACCGGTGGCCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLAFSGFW*TGGLLL
Trigger: CAGCAAGAGGCCACCGGTCCACCAGAATCCAGAGAA...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGGGCCTAAGACTCCGTaGGATGGCTCTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRGPKTP*DGSGEV
Trigger: CACCTCCCCAGAGCCATCCCACGGAGTCTTAGGCCC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGGGGAGCACCTGCCCCTaGGGCTCCTCTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: SIFFINRIGTVLKCDNMLGSTCP*GSSVDP
Trigger: AGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCC...CAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp TCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCCGGAAGCGGTGCTaGACGCCCATTGGGAGCACC +
Preference number: 4 (lower is better)
Translates to: SIFFINRIGTVLKCDNMLSRKRC*TPIGST
Trigger: GGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCT...CAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGGGCATCGGGCACCCCTaGGGGGATCACTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLGIGHP*GDHWLL
Trigger: CAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCC...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGCTTACCATCAGGGGGTaGTCTGGGTCCAAAACCACC +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMLTIRG*SGSKTT
Trigger: GGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAG...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGCCCAGCTCCTGCCGCTaGGCTCGGCTCTGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SIFFINRIGTVLKCDNMLPSSCR*ARLCLV
Trigger: TACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGG...CAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCGGCTGCGCAGGTCTTaGTGTAGAGAGCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLRLRRS*CRERGR
Trigger: CCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGCTCGAGTGGTGAGCTaGTCCACATACAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTARVVS*STYRSC
Trigger: GCAGGACCTGTATGTGGACCAGCTCACCACTCGAGC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCGAGACCTGGTCACCCTaGGTGGTTTTAGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFETWSP*VVLGMK
Trigger: CTTCATTCCTAAAACCACCCAGGGTGACCAGGTCTC...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CCA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCCAATCTCGCCGTCGGTaGATTTGGCTTGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSQSRRR*IWLDAG
Trigger: GCCAGCATCAAGCCAAATCCACCGACGGCGAGATTG...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGCTTCTGCAGCAGTGTaGCTTCCGTCTCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTASAAV*LPSLSG
Trigger: ACCGGACAGAGACGGAAGCCACACTGCTGCAGAAGC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCGGGAGATCTCGCTCTaGCTGTTGGTGATGAGCTCG +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTREISL*LLVMSS
Trigger: CGAGCTCATCACCAACAGCCAGAGCGAGATCTCCCG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGGATCTCGCCCTTCATaGCCCGGATCTCCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRGSRPS*PGSPSG
Trigger: GCCAGACGGAGATCCGGGCCATGAAGGGCGAGATCC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGTTCCAGGACGGTTTTaGTGCACTCATCGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMVPGRF*CTHRWP
Trigger: AGGCCACCGATGAGTGCACCAAAACCGTCCTGGAAC...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCTTGTTGGCGATCATCTaGCTGACCTTGTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSLLAII*LTLCRA
Trigger: GGCCCTGCACAAGGTCAGCCAGATGATCGCCAACAA...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAAAAGATTCCTATGGGTaGGGCTGGCTTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: AALTFPPLLSPPACGPVAKDSYG*GWLISL
Trigger: AAGAGAAATAAGCCAGCCCCACCCATAGGAATCTTT...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTATCCTTCTCTGGTGGTaGCACCATGTGGCTTTCATT +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSILLWW*HHVAFI
Trigger: AATGAAAGCCACATGGTGTCACCACCAGAGAAGGAT...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR TCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAATCGTATCTGCAGCACTaGTTTGCCCTTCCGGGGATG +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGESYLQH*FALPGM
Trigger: CATCCCCGGAAGGGCAAATCAGTGCTGCAGATACGA...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCGTTCCTGAGGAGGACTaGAATACGGGTAAGTCGTAT +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFVPEED*NTGKSY
Trigger: ATACGACTTACCCGTATTTCAGTCCTCCTCAGGAAC...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGAACTCCTCCAGGTCTaGGGACTCGATGTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRELLQV*GLDVAP
Trigger: GGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGGCCCATTGCTGCATaGTGCGCCTCTTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSWPIAA*CASSPR
Trigger: GCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCA...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTGGCCCATTGCTGCATaGTGCGCCTCTTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRWPIAA*CASSPR
Trigger: GCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp TTATTTCTCTTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAGATGCTGGCATCCTCTaGGCGCCTCCAGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: LFLLNDALLRVHVVFRNTDAGIL*APPAPP
Trigger: GGGCGGTGCTGGAGGCGCTCAGAGGATGCCAGCATC...TGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTGCTGCTGGTGTGTGTaGTGTCCAGGGTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRCCWCV*CPGWSG
Trigger: CCCAGACCACCCTGGACATCACACACACCAGCAGCA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTCTGCTTCCACCAGTTaGTTCAGGAGGGTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTSASTS*FRRVAF
Trigger: GAAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGTGTCGAAGTCTGCCTaGATCACCGACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMVSKSA*ITDSFS
Trigger: GGAAAAGCTGTCGGTGATTCAGGCAGACTTCGACAC...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAATGTGTCTGGGGCCACTaGCTTTCTCCTGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGECVWGH*LSPASC
Trigger: ACAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACA...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCCCATTGGGAGCACCTaGCCCTGGGGCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLPIGST*PWGSSV
Trigger: CACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTCCTCGGTGCTGGGCTaGTGGATCTGGTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSSVLG*WIWSWN
Trigger: GTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGCTCCTCGTTGGCGGCTaGGCAGGTCTTGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRLLVGG*AGLGVE
Trigger: CTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAG...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTTCCACATACAGGTCCTaGTTTTTCTTCTCGATTTCT +
Preference number: 4 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCSTYRS*FFFSIS
Trigger: AGAAATCGAGAAGAAAAAGCAGGACCTGTATGTGGA...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTCAGGCGCCCACACCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSQAPTP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGTGGGCGCCTG...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTTGTTGGAGGTCATGTaGTCCTGCAGCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTLLEVM*SCSFSR
Trigger: CCGGGAGAAGCTGCAGGAGCACATGACCTCCAACAA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGCAGGGTCTTCTGGTGTaGGTCCAGCCTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRQGLLV*VQPAAG
Trigger: ACCAGCAGCAGGCTGGACGCACACCAGAAGACCCTG...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAAAGGTCCTTCATGTGGTaGTCGATCTCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SKSLMTNTIPDLFLEALQRSFMW*SISFCS
Trigger: GGAGCAGAAGGAGATCGAGCACCACATGAAGGACCT...TTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACATTGCAGCTTCCGCTTaGGTTGTGACTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHIAASA*VVTSSG
Trigger: TCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAAT...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCATTCTGGTGGACCGGTaGCCTCTTGCTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTILVDR*PLAGSL
Trigger: AAGGCTTCCAGCAAGAGGCCACCGGTCCACCAGAAT...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTTCTCTGGATTCTGGTaGACCGGTGGCCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTFSGFW*TGGLLL
Trigger: CAGCAAGAGGCCACCGGTCCACCAGAATCCAGAGAA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCCTTTCTCTGGATTCTaGTGGACCGGTGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTPFSGF*WTGGLL
Trigger: CAAGAGGCCACCGGTCCACCAGAATCCAGAGAAAGG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGGGGAGCACCTGCCCCTaGGGCTCCTCTGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLGSTCP*GSSVDP
Trigger: AGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCC...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGTGCTGGATCTGGTCCTaGAACACTGGCAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLQRSPKVIGTWKSREKECWIWS*NTGRSP
Trigger: AGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCA...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCCCCCTCCTCGGTGCTaGGCTGCTGGATCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLPPPRC*AAGSGP
Trigger: AGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACGCCACAACCAGCTCTTaGAGGTCCAGCTTCAACTTT +
Preference number: 4 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHATTSS*RSSFNF
Trigger: AAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGC...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGGCCACAACCAGCTCTTaGAGGTCCAGCTTCAACTTT +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERAATTSS*RSSFNF
Trigger: AAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGC...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCAGGTCACCTGGGCCTaGACCGCCTTGCCATCGTGC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLQVTWA*TALPSC
Trigger: GCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTTCCCAAAGCATAATCTaGTGTTCTGCTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: SVLTLLRVSGATDFLLQASQSII*CSASTS
Trigger: ACTGGTGGAAGCAGAACACCAGATTATGCTTTGGGA...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp ACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCGCGGTGTTTATATTTTaGCTTGGGAAGCGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TVLKCDNMLSCQGTLKHRAVFIF*LGKRSR
Trigger: CCTAGAGCGCTTCCCAAGTCAAAATATAAACACCGC...GCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCAGGGCCACGATCTCTaGAAGGTTCTGTCGTTTGAG +
Preference number: 4 (lower is better)
Translates to: KLQRSPKVIGTWKSREKEQGHDL*KVLSFE
Trigger: CTCAAACGACAGAACCTTTCAGAGATCGTGGCCCTG...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp CTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTATTCCAAGTCCCTCATaGCAAACACAATTCCGGATC +
Preference number: 4 (lower is better)
Translates to: LQTKVLPGRVSPVWECGCIPSPS*QTQFRI
Trigger: GATCCGGAATTGTGTTTGTCATGAGGGACTTGGAAT...ACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGTGACCTGGCCCATTTaGTCCGACGGGCCTAAGACT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRVTWPI*SDGPKT
Trigger: AGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCAC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGGGACTCCACTCTCTCTaGCATGGCCCCCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLGLHSL*HGPLLG
Trigger: ACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCC...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTTCTCCATCTCAGTCTaGAGAGCCGCCAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: TVLKCDNMLSCQGTLKHRFSISV*RAANFL
Trigger: CAAAAAGTTGGCGGCTCTGCAGACTGAGATGGAGAA...GCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGTTCTCCATCTCAGTCTaGAGAGCCGCCAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERAFSISV*RAANFL
Trigger: CAAAAAGTTGGCGGCTCTGCAGACTGAGATGGAGAA...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCCTGCTGGCCCATTGCTaGATGATGCGCCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSLLAHC*MMRLFS
Trigger: GGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAG...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGCTGCTGGCCCATTGCTaGATGATGCGCCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRLLAHC*MMRLFS
Trigger: GGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAG...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAGGCTGCTGGCCCATTaGTGCATGATGCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRRLLAH*CMMRLF
Trigger: GAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTGGGTGGTGAGCTTCTaGAGCAGTGTGGCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRWVVSF*SSVASV
Trigger: GACGGAAGCCACACTGCTGCAGAAGCTCACCACCCA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCTCTGCAGGGCCACCTaGTTGGTCAGGCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLLCRAT*LVRHWV
Trigger: CACCCAGTGCCTGACCAAGCAGGTGGCCCTGCAGAG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTTGGTCTTCTCCTTCTaGAGCCTCAGGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTLVFSF*SLRMSW
Trigger: CCAGCTCATCCTGAGGCTGCAGAAGGAGAAGACCAA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGTTGGTCTTCTCCTTCTaGAGCCTCAGGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KLQRSPKVIGTWKSREKELVFSF*SLRMSW
Trigger: CCAGCTCATCCTGAGGCTGCAGAAGGAGAAGACCAA...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGAAGTTGATGAGCCCTTaGTTCCTCTCGATCAGGATC +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERAKLMSP*FLSIRI
Trigger: GATCCTGATCGAGAGGAAGCAAGGGCTCATCAACTT...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGGGGCCTGGACCGCCTTaGCATCGTGCTCGTCGATCA +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLGPGPP*HRARRS
Trigger: TGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCC...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTATTTCTCTTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACACTGTCCATCTTGCGCTaGCCCTCGGCCTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LFLLNDALLRVHVVFRNTLSILR*PSAWVV
Trigger: CACCACCCAGGCCGAGGGGCAGCGCAAGATGGACAG...TGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGATTTCTCTTAAACGATaGCCTTCTGAGGGTACATGT +
Preference number: 4 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTISLKR*PSEGTC
Trigger: ACATGTACCCTCAGAAGGGCATCGTTTAAGAGAAAT...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCCCTGGGGCTCCTCTGTaGATCCTGTCAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSPGAPL*ILSICP
Trigger: TGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGG...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTCGGTGCTGGGCTGCTaGATCTGGTCCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSVLGC*IWSWNT
Trigger: AGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp CTTCAACTTTTCGATCTGTCGGTTCAGGTAGTTCTTCAGGGCAGCCTGGAATCTTCCAAAACCACCAGCTaGGACCCTTCGTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LQLFDLSVQVVLQGSLESSKTTS*DPSSSA
Trigger: AGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGA...AGATTCCAGGCTGCCCTGAAGAACTACCTGAACCGACAGATCGAAAAGTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAATTCTTCAGGGCAGCCTaGAATCTTACCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGEFFRAA*NLTIRG
Trigger: CCCCCTGATGGTAAGATTCCAGGCTGCCCTGAAGAA...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCGGATCTCGCCCTTCATaGCCCGGATCTCCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSGSRPS*PGSPSG
Trigger: GCCAGACGGAGATCCGGGCCATGAAGGGCGAGATCC...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCCCGGGCCAGGCTGGCTaGAGCTGCCTTAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSPGQAG*SCLNFP
Trigger: GGGAAAGTTAAGGCAGCTCCAGCCAGCCTGGCCCGG...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TCCTATGGGTGGGGCTGGCTTATTTCTCTTAAACGATGCCCTTCTGAGGGTACAATCCTTCTCTGGTGGTaGCACCATGTGGCTTTCATT +
Preference number: 4 (lower is better)
Translates to: SYGWGWLISLKRCPSEGTILLWW*HHVAFI
Trigger: AATGAAAGCCACATGGTGTCACCACCAGAGAAGGAT...TGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTTGCCCTTCCGGGGATaGAGTTTCTGTATAGTAATA +
Preference number: 4 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFLPFRG*SFCIVI
Trigger: TATTACTATACAGAAACTTCATCCCCGGAAGGGCAA...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR TCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTCGTATCTGCAGCACTaGTTTGCCCTTCCGGGGATG +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSSYLQH*FALPGM
Trigger: CATCCCCGGAAGGGCAAATCAGTGCTGCAGATACGA...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCGAACTCCTCCAGGTCTaGGGACTCGATGTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSELLQV*GLDVAP
Trigger: GGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTC...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAGATGCTGGCATCCTCTaGGCGCCTCCAGCACCGCCC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETDAGIL*APPAPP
Trigger: GGGCGGTGCTGGAGGCGCTCAGAGGATGCCAGCATC...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTCGGTGGATTTGGCTTaGTGCTGGCATCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSVDLA*CWHPLS
Trigger: GCTCAGAGGATGCCAGCATCAAGCCAAATCCACCGA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGCTTGTCCTGCATCTTaGTGGTCTCCCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRACPAS*WSPSQR
Trigger: CCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGATCTCGGAATCCACTaGGGAACGCATCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTDLGIH*GTHLFC
Trigger: GCAAAAGAGATGCGTTCCTCAGTGGATTCCGAGATC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGGAGACAACGCGGCTGTaGAGGATGAGATGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLETTRL*RMRWGC
Trigger: GCACCCCCATCTCATCCTTCACAGCCGCGTTGTCTC...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGCTCTTCCCCTTCCACTaGTGCTTCCCCTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRLFPFH*CFPFCL
Trigger: GAGACAGAAGGGGAAGCAGCAGTGGAAGGGGAAGAG...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAACGGGTAAGTCGTATCTaGAGCACTGATTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGERVSRI*STDLPF
Trigger: GAAGGGCAAATCAGTGCTGCAGATACGACTTACCCG...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGCTAACACTATCGTATaGCTCCTCTCCAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTANTIV*LLSRQF
Trigger: GAACTGCCTGGAGAGGAGGCATACGATAGTGTTAGC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGGGGATCACTGGCTCCTaGGAGACGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLGITGS*ETNSSR
Trigger: CCTGGAGGAGTTCGTCTCGCAGGAGCCAGTGATCCC...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGGAGCCGCCAACTTTTTaGGCTCCTCGTTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLEPPTF*APRWRL
Trigger: CAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTC...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGTTTCTTCTCGATTTCTaGCCGGATCCTCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: KLQRSPKVIGTWKSREKEFLLDF*PDPLRL
Trigger: GAGACGGAGAGGATCCGGGCAGAAATCGAGAAGAAA...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATCCAGCACCGCCCTGTaGGCCTCGTCGCGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETSSTAL*ASSRCF
Trigger: GAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp CCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGACTCGTAGTTTCTTCTaGTCCATGATGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRSLVLGSPGRKSAGLMMTRSFF*SMMWSS
Trigger: GGAGCTCCACATCATGGAGCAGAAGAAACTACGAGT...CATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCCAGCTCCTCCGAGCTaGACCGGTTTTTATTCATCA +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTPAPPS*TGFYSS
Trigger: TGATGAATAAAAACCGGTGCAGCTCGGAGGAGCTGG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGTGGTTCAGCTTGTCCTaGATCTTGATGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KLQRSPKVIGTWKSREKEWFSLS*ILMVSL
Trigger: GAGGGAGACCATCAAGATGCAGGACAAGCTGAACCA...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TTATTTCTCTTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAGGGCCTAAGACTCCGTaGGATGGCTCTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LFLLNDALLRVHVVFRNTGPKTP*DGSGEV
Trigger: CACCTCCCCAGAGCCATCCCACGGAGTCTTAGGCCC...TGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTGCTGGATCTGGTCCTaGAACACTGGCAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRCWIWS*NTGRSP
Trigger: AGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCTGGGCTGCTGGATCTaGTCCTGGAACACTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLLGCWI*SWNTGR
Trigger: CCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAGATGTGTCATCATGTTaGTCTTCTCCTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLADVSSC*SSPSAA
Trigger: GGCTGCAGAAGGAGAAGACCAACATGATGACACATC...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGACTTTCTTCACGTCCTaGTCCAGCTCCACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRTFFTS*SSSTRV
Trigger: GACCCTGGTGGAGCTGGACCAGGACGTGAAGAAAGT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGGCCCGGATCTCCGTCTaGCCGATCTCGGAATCCACT +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLARISV*PISEST
Trigger: AGTGGATTCCGAGATCGGCCAGACGGAGATCCGGGC...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGAGACTGTCTCACAGTaGGATACGTTAGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTETVSQ*DTLEGH
Trigger: GTGACCCTCTAACGTATCCCACTGTGAGACAGTCTC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCCCCAGTGTGGGAGTGTaGGTGTGTGGGTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSPSVGV*VCGSAV
Trigger: GACTGCAGACCCACACACCCACACTCCCACACTGGG...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAAAACCAAAGTGTTACCTaGACGAGTAAGCCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SKSLMTNTIPDLFLEALQNQSVT*TSKPSV
Trigger: CACACTGGGCTTACTCGTCCAGGTAACACTTTGGTT...TTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGAAGGTCATTGGTACTTaGAAGTCCAGGGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERAKVIGT*KSREKE
Trigger: CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTT...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAAAAGCCCCAAGGTCATTaGTACTTGGAAGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VIGTWKSREKERWVNDGEKPQGH*YLEVQG
Trigger: TCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTT...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TTTTTACAATGTTTGCAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACACCCAAGTGGGCAGATaGCCAAGTCCTCTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: FLQCLQPKGSHVSEGNEDTQVGR*PSPLVL
Trigger: CAGGACGAGAGGACTTGGCCATCTGCCCACTTGGGT...GTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTGCAAACATTGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR TCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGTTCCTGAGGAGGACTaGAATACGGGTAAGTCGTAT +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTVPEED*NTGKSY
Trigger: ATACGACTTACCCGTATTTCAGTCCTCCTCAGGAAC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACTGCTGGCCCAGAGGTaGCCTGGCCCATTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETLLAQR*PGPFAP
Trigger: CGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGCCTCAGGATGCTCTGTaGTACCGACAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRPQDAL*YRQLLH
Trigger: GTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGG...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCCTCCCCCTCTTCAATTaGAGCTTCCGCTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSLPLFN*SFRLGC
Trigger: ACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAG...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATGGCCCCCTCCTCGGTaGTGGGCTGCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETWPPPR*WAAGSG
Trigger: ACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGTTCTCCAGCAGCTTCTaGAGGTGTACCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SIFFINRIGTVLKCDNMLFSSSF*RCTRCC
Trigger: GCAGCACCTGGTACACCTGCAGAAGCTGCTGGAGAA...CAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTTCTCCATCTCAGTCTaGAGAGCCGCCAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTFSISV*RAANFL
Trigger: CAAAAAGTTGGCGGCTCTGCAGACTGAGATGGAGAA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCAGGCTGCTGGCCCATTaGTGCATGATGCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSRLLAH*CMMRLF
Trigger: GAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCT...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCACTCGTAGTTTCTTCTaGTCCATGATGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTTRSFF*SMMWSS
Trigger: GGAGCTCCACATCATGGAGCAGAAGAAACTACGAGT...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAGTGCAGATTTGGGAGTaGTGCAAACCAAAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLAVQIWE*CKPKCY
Trigger: GTAACACTTTGGTTTGCAGCACTCCCAAATCTGCAC...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAAGTGCTCTTATTTCAGTaGTCACCCTGTTACGTGTGT +
Preference number: 4 (lower is better)
Translates to: SKSLMTNTIPDLFLEALQVLLFQ*SPCYVC
Trigger: ACACACGTAACAGGGTGAGCACTGAAATAAGAGCAC...TTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCATTTTCCCTTTAAACTaGAAAGAAGCCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LQRSPKVIGTWKSREKERIFPLN*KEAPRS
Trigger: TGACCTTGGGGCTTCTTTGCAGTTTAAAGGGAAAAT...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTCCAAAACCACCAGCTaGGACCCTTCGTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSKTTS*DPSSSA
Trigger: AGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTTCTTCAGGGCAGCCTaGAATCTTACCATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRFFRAA*NLTIRG
Trigger: CCCCCTGATGGTAAGATTCCAGGCTGCCCTGAAGAA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACCCAGCTCCTGCCGCTaGGCTCGGCTCTGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETPSSCR*ARLCLV
Trigger: TACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCGCCGTCGGTGGATTTaGCTTGATGCTGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLRRRWI*LDAGIL
Trigger: GAGGATGCCAGCATCAAGCCAAATCCACCGACGGCG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGATCATTTGTTCCAGCTaGTCCTGGCTGAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRIICSS*SWLRAS
Trigger: GGATGCCCTCAGCCAGGACCAGCTGGAACAAATGAT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGATGTGTCATCATGTTaGTCTTCTCCTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTDVSSC*SSPSAA
Trigger: GGCTGCAGAAGGAGAAGACCAACATGATGACACATC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCCGGGAGATCTCGCTCTaGCTGTTGGTGATGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSREISL*LLVMSS
Trigger: CGAGCTCATCACCAACAGCCAGAGCGAGATCTCCCG...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTGTGGAGCTCCTTCTTaGATGCGTCCAGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLCGAPS*MRPGRP
Trigger: TGGCCTCCCTGGACGCATCCAAGAAGGAGCTCCACA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTCTCCAGGCAGTTCCTaGGGAGGACTGAAATACGGG +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLSPGSS*GGLKYG
Trigger: CCCGTATTTCAGTCCTCCTCAGGAACTGCCTGGAGA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCCACAGTCCTGAAGTGTaGCAACATGCTGAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSHSPEV*QHAELS
Trigger: TGACAGCTCAGCATGTTGTCACACTTCAGGACTGTG...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGCCTGCAACTCCTCCGTaGGTATCATTTGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRPATPP*VSFVPA
Trigger: AGCTGGAACAAATGATACTCACGGAGGAGTTGCAGG...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGGCTTGCTCAGCCTTTTaGTTTCAAGCTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLACSAF*FQAPGA
Trigger: GGCCCCTGGAGCTTGAAATCAAAAGGCTGAGCAAGC...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGTTTCTTCTGCTCCATaGTGTGGAGCTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRVSSAP*CGAPSW
Trigger: CCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAAC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGAGCCCTTCTGTGGTGTaGGACTGTCTCACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLSPSVV*DCLTVG
Trigger: TCCCACTGTGAGACAGTCTCACACCACAGAAGGGCT...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTCTGCAGCACTGATTTaGCCTTCCGGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSAALI*PSGDEV
Trigger: AACTTCATCCCCGGAAGGGCAAATCAGTGCTGCAGA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACGCTGGGCTCGGCTCTaGTTGGTAGCCACAACCAGC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETRWARL*LVATTS
Trigger: GCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACCTCCTCCTTCTGCCTaGGCTCGCTCGAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETPPPSA*ARSRPL
Trigger: CAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGTCCACATACAGGTCCTaGTTTTTCTTCTCGATTTCT +
Preference number: 4 (lower is better)
Translates to: TAKKPQGHWYLEVQGERASTYRS*FFFSIS
Trigger: AGAAATCGAGAAGAAAAAGCAGGACCTGTATGTGGA...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTGGTTCAGCTTGTCCTaGATCTTGATGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRWFSLS*ILMVSL
Trigger: GAGGGAGACCATCAAGATGCAGGACAAGCTGAACCA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACCGGTGGCCTCTTGCTaGAAGCCTTGGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETPVASC*KPWRPA
Trigger: GGCTGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGCCACAACCAGCTCTTaGAGGTCCAGCTTCAACTTT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRATTSS*RSSFNF
Trigger: AAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCAATCTCGCCGTCGGTaGATTTGGCTTGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLQSRRR*IWLDAG
Trigger: GCCAGCATCAAGCCAAATCCACCGACGGCGAGATTG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGATGTCCAGGGTGGTCTaGGCAATGTCACCGTTGATT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRMSRVV*AMSPLI
Trigger: AATCAACGGTGACATTGCCCAGACCACCCTGGACAT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTTCTGCTCCATGATGTaGAGCTCCTTCTTGGATGCG +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRFCSMM*SSFLDA
Trigger: CGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGTCCTATGGGTGGGGCTaGCTTATTTCTCTTAAACGA +
Preference number: 4 (lower is better)
Translates to: KLQRSPKVIGTWKSREKESYGWG*LISLKR
Trigger: TCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCATCCTTCTCTGGTGGTaGCACCATGTGGCTTTCATT +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSILLWW*HHVAFI
Trigger: AATGAAAGCCACATGGTGTCACCACCAGAGAAGGAT...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCTATATAGCATCCTGGTaGGCGTTAGCATTCGCGGAT +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSYIASW*ALAFAD
Trigger: ATCCGCGAATGCTAACGCTCACCAGGATGCTATATA...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR TCA 90 bp TCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAATATTCATCAACATGTTaGGCTTCTTCAGGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: SKSLMTNTIPDLFLEALQYSSTC*ASSGRC
Trigger: ACAACGACCTGAAGAAGCTCAACATGTTGATGAATA...TTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGGAGGGTCACAAAGTTTaGGGGTTACAACCGGCATTT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTREGHKV*GLQPAF
Trigger: AAATGCCGGTTGTAACCCTCAAACTTTGTGACCCTC...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCTCCCCCTCTTCAATTaGAGCTTCCGCTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLLPLFN*SFRLGC
Trigger: ACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAGGACCGGTGGCCTCTTaGTGGAAGCCTTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETGPVAS*WKPWRP
Trigger: TGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCC...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGAGGTCCTTCATGTGGTaGTCGATCTCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLRSFMW*SISFCS
Trigger: GGAGCAGAAGGAGATCGAGCACCACATGAAGGACCT...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAGTCACCCGGTTGTTCTaGTCCAGCTCCTCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETVTRLF*SSSSEL
Trigger: CAGCTCGGAGGAGCTGGAGCAGAACAACCGGGTGAC...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCGGTGGTGACACCATGTaGCTTTCATTATTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSGGDTM*LSLFPS
Trigger: GGAAGGGAATAATGAAAGCCACATGGTGTCACCACC...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATTTTGCGCTCCTCGTTaGCGGCTGCGCAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETFCAPR*RLRRSW
Trigger: CCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCATCATTTGTTCCAGCTaGTCCTGGCTGAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSIICSS*SWLRAS
Trigger: GGATGCCCTCAGCCAGGACCAGCTGGAACAAATGAT...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATCCACCAGGGTCTTCTaGTGTGCGTCCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETSTRVF*CASSLL
Trigger: CAGCAGGCTGGACGCACACCAGAAGACCCTGGTGGA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTTCTCCTCGCTGAGCTaGTTCAGCTTGTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLFSSLS*FSLSCI
Trigger: GATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCGTGCTGTGATTACATaGAGTAGGAATAAAACAGCG +
Preference number: 4 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTRAVIT*SRNKTA
Trigger: CGCTGTTTTATTCCTACTCCATGTAATCACAGCACG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAATTGCGTGGCGGTCGTaGCTCTTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETIAWRS*LFSSSF
Trigger: GAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAAT...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCGTTTCTTCTGCTCCATaGTGTGGAGCTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSVSSAP*CGAPSW
Trigger: CCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAAC...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATCGCCTTCTCCTCGCTaGGCTGGTTCAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETSPSPR*AGSACP
Trigger: AGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCGGGTAAGTCGTATCTaGAGCACTGATTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLRVSRI*STDLPF
Trigger: GAAGGGCAAATCAGTGCTGCAGATACGACTTACCCG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATGTCAATCTGCCCACTaGTGGCCCAGAGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETCQSAH*WPRGDL
Trigger: CAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATGGATCCTGTCAATCTaGCCACTGCTGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETWILSI*PLLAQR
Trigger: CCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCCA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTTTCTTCTCGATTTCTaGCCGGATCCTCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLFLLDF*PDPLRL
Trigger: GAGACGGAGAGGATCCGGGCAGAAATCGAGAAGAAA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAGCTTGGCGGATGGCCTaGAACTCCTCCGTGAGTATC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETAWRMA*NSSVSI
Trigger: GATACTCACGGAGGAGTTGCAGGCCATCCGCCAAGC...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATCTCGATCAGGATCGTaGGCCGGGAGATCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETSRSGS*AGRSRS
Trigger: AGAGCGAGATCTCCCGGCGCACGATCCTGATCGAGA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCACCATCCGCTCCAGCTaGTTGTTGAGGAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSTIRSS*LLRKLM
Trigger: CATCAACTTCCTCAACAAGCAGCTGGAGCGGATGGT...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACCGCCTTGCCATCGTaGTCGTCGATCAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETTALPS*SSISLL
Trigger: GAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGT...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACCTGGGGCTCCTCTGTaGATCCTGTCAATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETPGAPL*ILSICP
Trigger: TGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTATTTCTCTTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACATCCAAAACCACCAGCTaGGACCCTTCGTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LFLLNDALLRVHVVFRNTSKTTS*DPSSSA
Trigger: AGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGA...TGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACATCAGGGGGTGGTCTaGGTCCAAAACCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETHQGVV*VQNHQL
Trigger: CAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGATCCTTCTCTGGTGGTaGCACCATGTGGCTTTCATT +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLILLWW*HHVAFI
Trigger: AATGAAAGCCACATGGTGTCACCACCAGAGAAGGAT...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATCGTATCTGCAGCACTaGTTTGCCCTTCCGGGGATG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETSYLQH*FALPGM
Trigger: CATCCCCGGAAGGGCAAATCAGTGCTGCAGATACGA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAGCTTGGGCCAAGTACTaGGCCTCAAACAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETAWAKY*ASNRAM
Trigger: CATTGCCCTGTTTGAGGCTCAGTACTTGGCCCAAGC...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAATACCAGCGTGCTGTaGTTACATGGAGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRNTSVL*LHGVGI
Trigger: TATTCCTACTCCATGTAATCACAGCACGCTGGTATT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATTCTCCAGCAGCTTCTaGAGGTGTACCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETFSSSF*RCTRCC
Trigger: GCAGCACCTGGTACACCTGCAGAAGCTGCTGGAGAA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACTGTCCGGTTCAGGATaGTCGCCAGCTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETLSGSG*SPASRS
Trigger: AGAACGAGAAGCTGGCGAGCATCCTGAACCGGACAG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAGTATTGAACTGGCTCTaGAGGGCCACCTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETVLNWL*RATCLV
Trigger: GACCAAGCAGGTGGCCCTGCAGAGCCAGTTCAATAC...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGAAGTTGATGAGCCCTTaGTTCCTCTCGATCAGGATC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLKLMSP*FLSIRI
Trigger: GATCCTGATCGAGAGGAAGCAAGGGCTCATCAACTT...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACTTACCATCAGGGGGTaGTCTGGGTCCAAAACCACC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETLTIRG*SGSKTT
Trigger: GGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATCTTCTTCCAGTTGCTaGGCTCGAGTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETSSSSC*ARVVSW
Trigger: CCAGCTCACCACTCGAGCCCAGCAACTGGAAGAAGA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGATTTGGTGGTCTTGTTaGAGGTCATGTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLIWWSC*RSCAPA
Trigger: TGCAGGAGCACATGACCTCCAACAAGACCACCAAAT...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTATTTCTTCATCCTGTaGATCTCGCCCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLYFFIL*ISPFMA
Trigger: GGCCATGAAGGGCGAGATCCACAGGATGAAGAAATA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTATTTCTCTTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAGGCACGTGCAGATTTaGGAGTGCTGCAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: LFLLNDALLRVHVVFRNTRHVQI*ECCKPK
Trigger: CTTTGGTTTGCAGCACTCCCAAATCTGCACGTGCCT...TGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TTATTTCTCTTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAGTTCCTGAGGAGGACTaGAATACGGGTAAGTCGTAT +
Preference number: 4 (lower is better)
Translates to: LFLLNDALLRVHVVFRNTVPEED*NTGKSY
Trigger: ATACGACTTACCCGTATTTCAGTCCTCCTCAGGAAC...TGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTATTCATCAACATGTTaGGCTTCTTCAGGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRYSSTC*ASSGRC
Trigger: ACAACGACCTGAAGAAGCTCAACATGTTGATGAATA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTTATCCTTAAGGCCCTaGACCTTTAGCTTGATGACC +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLLSLRP*TFSLMT
Trigger: GGTCATCAAGCTAAAGGTTCAGGGCCTTAAGGATAA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTCCACATACAGGTCCTaGTTTTTCTTCTCGATTTCT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSTYRS*FFFSIS
Trigger: AGAAATCGAGAAGAAAAAGCAGGACCTGTATGTGGA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAATGTCTTCTTCCAGTTaGTGGGCTCGAGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETMSSSS*WARVVS
Trigger: GCTCACCACTCGAGCCCAGCAACTGGAAGAAGACAT...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTCTCCTGCTCAATCTTaGTTTCTACTCGTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSPAQS*FLLVVS
Trigger: AGAAACTACGAGTAGAAAGCAAGATTGAGCAGGAGA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATCCAGGTCCTTCATGTaGTGCTCGATCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETSRSFM*CSISFC
Trigger: GCAGAAGGAGATCGAGCACCACATGAAGGACCTGGA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTCCCAAAGCATAATCTaGTGTTCTGCTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLSQSII*CSASTS
Trigger: ACTGGTGGAAGCAGAACACCAGATTATGCTTTGGGA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTTGCCCTTCCGGGGATaGAGTTTCTGTATAGTAATA +
Preference number: 4 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLLPFRG*SFCIVI
Trigger: TATTACTATACAGAAACTTCATCCCCGGAAGGGCAA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp TTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAAAAGATTCCTTGCCCTTCCGGGGATaGAGTTTCTGTATAGTAATA +
Preference number: 4 (lower is better)
Translates to: LNDALLRVHVVFRNTKDSLPFRG*SFCIVI
Trigger: TATTACTATACAGAAACTTCATCCCCGGAAGGGCAA...GGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR TCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACAGCGTTTTGTGAGATaGCATGCACGTGCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETQRFVR*HARACV
Trigger: CACACAAGCACGTGCATGTCATCTCACAAAACGCTG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACCATCCGCTCCAGCTaGTTGTTGAGGAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETTIRSS*LLRKLM
Trigger: CATCAACTTCCTCAACAAGCAGCTGGAGCGGATGGT...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR GCA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAGCTTGATGACCACTTaGAATTTAATTACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSLMTT*NLITSL
Trigger: AAGGCTGGTAATTAAATTGCAAGTGGTCATCAAGCT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAATTGCAGCTTCCGCTTaGGTTGTGACTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETIAASA*VVTSSG
Trigger: TCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAAT...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR TCA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAGGGCAATGTCACCGTTaGTTTTGGAAAGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: LITSLLKAMKSNCDHGETGQCHR*FWKDVS
Trigger: TGACACATCTTTCCAAAATCAACGGTGACATTGCCC...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS GCA 90 bp TGGAGCGGTGAACGGAGAGCGCGGCCTGGCGACTCCAAGACCCGCTaGCCCTCGGCCCGGCTTACCGGCCCGCCGCGCCGCCCGGTTCCG +
Preference number: 5 (lower is better)
Translates to: WSGERRARPGDSKTR*PSARLTGPPRRPVP
Trigger: CGGAACCGGGCGGCGCGGCGGGCCGGTAAGCCGGGCCGAGGGGCAGCGGGTCTTGGAGTCGCCAGGCCGCGCTCTCCGTTCACCGCTCCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572270.1
ENST00000574099.1
CDS TCA 90 bp GCAGAACGCCCACCGCAAGGACCGTACCCCCGCCCTCCATCGTCCTaGGCCCCGGGACTGCGTGGACACGGCCGGACCTTCAGCGAGCGC +
Preference number: 5 (lower is better)
Translates to: AERPPQGPYPRPPSS*APGLRGHGRTFSER
Trigger: GCGCTCGCTGAAGGTCCGGCCGTGTCCACGCAGTCCCGGGGCTCAGGACGATGGAGGGCGGGGGTACGGTCCTTGCGGTGGGCGTTCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp CCGTGCGCCAGGTGTGACCTGTGGGGCGGGCCCGGCCTCACCAGCTaGTCCTGGCTGAGGGCATCCTCTGTGTCCTGCAGGGTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: PCARCDLWGGPGLTS*SWLRASSVSCRVSL
Trigger: CAGGCTCACCCTGCAGGACACAGAGGATGCCCTCAGCCAGGACCAGCTGGTGAGGCCGGGCCCGCCCCACAGGTCACACCTGGCGCACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 90 bp GGGAAGCGCTCTAGGGACACGCTGAGCGCCTCCAGCACCGCCCTGTaGGCCTCGTCGCGGTGCTTCATGCCCACCAGGCTGCTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: GKRSRDTLSASSTAL*ASSRCFMPTRLLAH
Trigger: ATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGAGGCGCTCAGCGTGTCCCTAGAGCGCTTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS GCA 90 bp GAGACAAGGAGCCACAGGGTGCACGTGCCTGAAGAGGCACCACCGTaGGCCAGGTGTGACCTGTGGGGCGGGCCCGGCCTCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ETRSHRVHVPEEAPP*ARCDLWGGPGLTSW
Trigger: CCAGCTGGTGAGGCCGGGCCCGCCCCACAGGTCACACCTGGCGCACGGTGGTGCCTCTTCAGGCACGTGCACCCTGTGGCTCCTTGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp GCGGGACAGCTGTGGGGAGGGCCATGGGATTGTGGATGCCGGGGCTaGTGCCCTCTATCCCGGCACCGAGGGCAGGGCTGCAGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: AGQLWGGPWDCGCRG*CPLSRHRGQGCRLD
Trigger: ATCCAGCCTGCAGCCCTGCCCTCGGTGCCGGGATAGAGGGCACCAGCCCCGGCATCCACAATCCCATGGCCCTCCCCACAGCTGTCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 90 bp TGGTGGAAGTCGGTGCGGGTGAGCGCCTTCCTGTCCATCTTGCGCTaGCCCTCGGCCTGGGTGGTGACGGTCTCTCTGCGGGCAACCGCC +
Preference number: 5 (lower is better)
Translates to: WWKSVRVSAFLSILR*PSAWVVTVSLRATA
Trigger: GGCGGTTGCCCGCAGAGAGACCGTCACCACCCAGGCCGAGGGGCAGCGCAAGATGGACAGGAAGGCGCTCACCCGCACCGACTTCCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS TCA 90 bp GGAACTGGGGGTACTCGTCCCGCACGCGGTCCAGGATGGTGGCGATaGGAGCCAGTCGCTTGTCCAGGCGCTGGCGCTCCAGCACTAGGG +
Preference number: 5 (lower is better)
Translates to: GTGGTRPARGPGWWR*EPVACPGAGAPALG
Trigger: CCCTAGTGCTGGAGCGCCAGCGCCTGGACAAGCGACTGGCTCTCATCGCCACCATCCTGGACCGCGTGCGGGACGAGTACCCCCAGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS GCA 90 bp AGGTCTGAGGACTCGATGTCGCTCCCGTGGCTCAGCCGGAAGCGGTaGTGGACGCCCATTGGGAGCACCTGCCCCTGGGGCTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: RSEDSMSLPWLSRKR*WTPIGSTCPWGSSV
Trigger: CACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS GCA 90 bp TCCCTCTCAGAGGCCCCCGCCCTCCATCGTCCTGAGCCCCGGGACTaGGTGGACACGGCCGGACCTTCAGCGAGCGCACGAACTCATTCT +
Preference number: 5 (lower is better)
Translates to: SLSEAPALHRPEPRD*VDTAGPSASARTHS
Trigger: AGAATGAGTTCGTGCGCTCGCTGAAGGTCCGGCCGTGTCCACGCAGTCCCGGGGCTCAGGACGATGGAGGGCGGGGGCCTCTGAGAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS GCA 90 bp CTCTGGTTCCTCGACCTGCATCTGAGCGCCTCCAGCACCGCCCTGTaGGCCTCGTCGCGGTGCTTCATGCCCACCAGGCTGCTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: LWFLDLHLSASSTAL*ASSRCFMPTRLLAH
Trigger: ATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGAGGCGCTCAGATGCAGGTCGAGGAACCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS GCA 90 bp CGCAAGGACCGTACCCCCGCCCTCCATCGTCCTGAGCCCCGGGACTaGGTGGACACGGCCGGACCTTCAGCGAGCGCACGAACTCATTCT +
Preference number: 5 (lower is better)
Translates to: RKDRTPALHRPEPRD*VDTAGPSASARTHS
Trigger: AGAATGAGTTCGTGCGCTCGCTGAAGGTCCGGCCGTGTCCACGCAGTCCCGGGGCTCAGGACGATGGAGGGCGGGGGTACGGTCCTTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 90 bp GGACAGCTGTGGGGAGGGCCATGGGATTGTGGATGCCGGGGCTGGTaGCCTCTATCCCGGCACCGAGGGCAGGGCTGCAGGCTGGATTTC +
Preference number: 5 (lower is better)
Translates to: GQLWGGPWDCGCRGW*PLSRHRGQGCRLDF
Trigger: GAAATCCAGCCTGCAGCCCTGCCCTCGGTGCCGGGATAGAGGGCACCAGCCCCGGCATCCACAATCCCATGGCCCTCCCCACAGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp GCAACCCTGGTGACACAGGGAGAGGAGCCCTTGCCCGGCCACAGCTaGCTCTGGTTCCTCGACCTGCATCTGAGCGCCTCCAGCACCGCC +
Preference number: 5 (lower is better)
Translates to: ATLVTQGEEPLPGHS*LWFLDLHLSASSTA
Trigger: GGCGGTGCTGGAGGCGCTCAGATGCAGGTCGAGGAACCAGAGCCAGCTGTGGCCGGGCAAGGGCTCCTCTCCCTGTGTCACCAGGGTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS TCA 90 bp CAGGTGGGTGGCACCTGGCTCCTGCGAGACGAACTCCTCCAGGTCTaGGGACTCGATGTCGCTCCCGTGGCTCAGCCGGAAGCGGTGCTG +
Preference number: 5 (lower is better)
Translates to: QVGGTWLLRDELLQV*GLDVAPVAQPEAVL
Trigger: CAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTCGTCTCGCAGGAGCCAGGTGCCACCCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576241.1
CDS GCA 90 bp CCGTGGCTCAGCCGGAAGCGGTGCTGGACGCCCATTGGGAGCACCTaGCCCTGGGGCTCCTCTGTGGATCCTGTCAATCTGCCCACTGCT +
Preference number: 5 (lower is better)
Translates to: PWLSRKRCWTPIGST*PWGSSVDPVNLPTA
Trigger: AGCAGTGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS CCA 90 bp CTCAGCCGGAAGCGGTGCTGGACGCCCATTGGGAGCACCTGCCCCTaGGGCTCCTCTGTGGATCCTGTCAATCTGCCCACTGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: LSRKRCWTPIGSTCP*GSSVDPVNLPTAGP
Trigger: TGGGCCAGCAGTGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS CCA 90 bp TCTGAGGACTCGATGTCGCTCCCGTGGCTCAGCCGGAAGCGGTGCTaGACGCCCATTGGGAGCACCTGCCCCTGGGGCTCCTCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: SEDSMSLPWLSRKRC*TPIGSTCPWGSSVD
Trigger: ATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS CCA 90 bp TCTCAGAGGCCCCCGCCCTCCATCGTCCTGAGCCCCGGGACTGCGTaGACACGGCCGGACCTTCAGCGAGCGCACGAACTCATTCTCTGT +
Preference number: 5 (lower is better)
Translates to: SQRPPPSIVLSPGTA*TRPDLQRAHELILC
Trigger: ACAGAGAATGAGTTCGTGCGCTCGCTGAAGGTCCGGCCGTGTCCACGCAGTCCCGGGGCTCAGGACGATGGAGGGCGGGGGCCTCTGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS CCA 90 bp GATCCCCGACCCAAGACCGGGCAGGACCCGGGATGTCTCGGCAGGTaGACATGTGGGTGGAGAGTGGTCCAGGAAGGATGCCCGCCTCCA +
Preference number: 5 (lower is better)
Translates to: DPRPKTGQDPGCLGR*TCGWRVVQEGCPPP
Trigger: TGGAGGCGGGCATCCTTCCTGGACCACTCTCCACCCACATGTCCACCTGCCGAGACATCCCGGGTCCTGCCCGGTCTTGGGTCGGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp AGGACCGTACCCCCGCCCTCCATCGTCCTGAGCCCCGGGACTGCGTaGACACGGCCGGACCTTCAGCGAGCGCACGAACTCATTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RTVPPPSIVLSPGTA*TRPDLQRAHELILC
Trigger: ACAGAGAATGAGTTCGTGCGCTCGCTGAAGGTCCGGCCGTGTCCACGCAGTCCCGGGGCTCAGGACGATGGAGGGCGGGGGTACGGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 90 bp TCGGACTCCACTCTCTCTGCCATGGCCCCCTCCTCGGTGCTGGGCTaGTGGATCTGGTCCTGGAACACTGGCAGGTCTCCTTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SDSTLSAMAPSSVLG*WIWSWNTGRSPSLG
Trigger: CCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS GCA 90 bp CTCAGTCTGCAGAGCCGCCAACTTTTTGCGCTCCTCGTTGGCGGCTaGGCAGGTCTTGGTGTAGAGAGCGCGGGCGGCCTGCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LSLQSRQLFALLVGG*AGLGVESAGGLQLL
Trigger: GAGGAGCTGCAGGCCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCTGCAGACTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS GCA 90 bp GGCCCTGGTGACTCGAGCTTGTTGGCGATCATCTGGCTGACCTTGTaGAGGGCCTCCTGGAACTGGGGGTACTCGTCCCGCACGCGGTCC +
Preference number: 5 (lower is better)
Translates to: GPGDSSLLAIIWLTL*RASWNWGYSSRTRS
Trigger: GGACCGCGTGCGGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCAACAAGCTCGAGTCACCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 90 bp GATGTCGCTCCCGTGGCTCAGCCGGAAGCGGTGCTGGACGCCCATTaGGAGCACCTGCCCCTGGGGCTCCTCTGTGGATCCTGTCAATCT +
Preference number: 5 (lower is better)
Translates to: DVAPVAQPEAVLDAH*EHLPLGLLCGSCQS
Trigger: AGATTGACAGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS CCA 90 bp TGCGAGACGAACTCCTCCAGGTCTGAGGACTCGATGTCGCTCCCGTaGCTCAGCCGGAAGCGGTGCTGGACGCCCATTGGGAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: CETNSSRSEDSMSLP*LSRKRCWTPIGSTC
Trigger: GCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTCGTCTCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS CCA 90 bp ACTCTCTCTGCCATGGCCCCCTCCTCGGTGCTGGGCTGCTGGATCTaGTCCTGGAACACTGGCAGGTCTCCTTCCCTGGGGTGGGCATCG +
Preference number: 5 (lower is better)
Translates to: TLSAMAPSSVLGCWI*SWNTGRSPSLGWAS
Trigger: CGATGCCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS CCA 90 bp GACTCCACTCTCTCTGCCATGGCCCCCTCCTCGGTGCTGGGCTGCTaGATCTGGTCCTGGAACACTGGCAGGTCTCCTTCCCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: DSTLSAMAPSSVLGC*IWSWNTGRSPSLGW
Trigger: CCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS CCA 90 bp TCCCCTCGGACTCCACTCTCTCTGCCATGGCCCCCTCCTCGGTGCTaGGCTGCTGGATCTGGTCCTGGAACACTGGCAGGTCTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: SPRTPLSLPWPPPRC*AAGSGPGTLAGLLP
Trigger: GGGAAGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCCGAGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS CCA 90 bp GTGCAGGTGGCTCATCGCCAGGGCAGGGTGACCTCAGCAGGTGGGTaGCACCTGGCTCCTGCGAGACGAACTCCTCCAGGTCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: VQVAHRQGRVTSAGG*HLAPARRTPPGLRT
Trigger: AGTCCTCAGACCTGGAGGAGTTCGTCTCGCAGGAGCCAGGTGCCACCCACCTGCTGAGGTCACCCTGCCCTGGCGATGAGCCACCTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576241.1
CDS-3UTR CAA 90 bp TGCAGCTCCTCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATTGCGTGGCGGTCGGGTGCTGGACGCCCATaGGGAGCACTGATTTGCCCT +
Preference number: 5 (lower is better)
Translates to: CSSSSFCLRSLEAIAWRSGAGRP*GALICP
Trigger: AGGGCAAATCAGTGCTCCCAATGGGCGTCCAGCACC...CGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS TCA 90 bp GGCCTTGCAAGGCGGAGTCCAGGCTGCTCCCTAGGAGGGCCCTGGTaGCTCGAGCTTGTTGGCGATCATCTGGCTGACCTTGTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GLARRSPGCSLGGPW*LELVGDHLADLVQG
Trigger: GCCCTGCACAAGGTCAGCCAGATGATCGCCAACAAGCTCGAGTCACCAGGGCCCTCCTAGGGAGCAGCCTGGACTCCGCCTTGCAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS TCA 90 bp GGCAGATGGCCAAGTCCTCTCGTCCTGGTGTTCAGGCAACCCTGGTaGCACAGGGAGAGGAGCCCTTGCCCGGCCACAGCTGGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: GRWPSPLVLVFRQPW*HRERSPCPATAGSG
Trigger: ACCAGAGCCAGCTGTGGCCGGGCAAGGGCTCCTCTCCCTGTGTCACCAGGGTTGCCTGAACACCAGGACGAGAGGACTTGGCCATCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS TCA 90 bp GCCGGTGGTGCTATTACTGGCCTGGGATCAGGAGAGGCCGTGACCTaGTCAGGAGAGGCCGTGACTCGCACAGAGGGGACGCAGGACCTC +
Preference number: 5 (lower is better)
Translates to: AGGAITGLGSGEAVT*SGEAVTRTEGTQDL
Trigger: GAGGTCCTGCGTCCCCTCTGTGCGAGTCACGGCCTCTCCTGATCAGGTCACGGCCTCTCCTGATCCCAGGCCAGTAATAGCACCACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 90 bp GGCCTGCAGCTCCTCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATTaGGTGGCGGTCGTGACTCTTCTCCAGCAGCTTCTGCAGGTGTAC +
Preference number: 5 (lower is better)
Translates to: GLQLLLLLPALARGH*VAVVTLLQQLLQVY
Trigger: GTACACCTGCAGAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCTGCAGGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS GCA 90 bp GCCTCGTCGCGGTGCTTCATGCCCACCAGGCTGCTGGCCCATTGCTaGATGATGCGCCTCTTCTCCACGCTGATGGCGTCGATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: ASSRCFMPTRLLAHC*MMRLFSTLMASISV
Trigger: CACCGAGATCGACGCCATCAGCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374877.7
ENST00000397545.9
ENST00000571028.1
ENST00000574799.5
CDS GCA 90 bp TGCGCCTCGTCGCGGTGCTTCATGCCCACCAGGCTGCTGGCCCATTaGTGCATGATGCGCCTCTTCTCCACGCTGATGGCGTCGATCTCG +
Preference number: 5 (lower is better)
Translates to: CASSRCFMPTRLLAH*CMMRLFSTLMASIS
Trigger: CGAGATCGACGCCATCAGCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374877.7
ENST00000397545.9
ENST00000571028.1
ENST00000574799.5
CDS CCA 90 bp CCAGTCGCTTGTCCAGGCGCTGGCGCTCCAGCACTAGGGACTGCTTaGAGCGGAACAGGAACACGTAGCGCCCCTCCTTCACAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: PVACPGAGAPALGTA*SGTGTRSAPPSQPA
Trigger: TGCAGGCTGTGAAGGAGGGGCGCTACGTGTTCCTGTTCCGCTCCAAGCAGTCCCTAGTGCTGGAGCGCCAGCGCCTGGACAAGCGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 90 bp CGGTCCAGGATGGTGGCGATGAGAGCCAGTCGCTTGTCCAGGCGCTaGCGCTCCAGCACTAGGGACTGCTTGGAGCGGAACAGGAACACG +
Preference number: 5 (lower is better)
Translates to: RSRMVAMRASRLSRR*RSSTRDCLERNRNT
Trigger: CGTGTTCCTGTTCCGCTCCAAGCAGTCCCTAGTGCTGGAGCGCCAGCGCCTGGACAAGCGACTGGCTCTCATCGCCACCATCCTGGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 90 bp TCGAGCTTGTTGGCGATCATCTGGCTGACCTTGTGCAGGGCCTCCTaGAACTGGGGGTACTCGTCCCGCACGCGGTCCAGGATGGTGGCG +
Preference number: 5 (lower is better)
Translates to: SSLLAIIWLTLCRAS*NWGYSSRTRSRMVA
Trigger: CGCCACCATCCTGGACCGCGTGCGGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCAACAAGCTCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 90 bp GGCAGGACCCGGGATGTCTCGGCAGGTGGACATGTGGGTGGAGAGTaGTCCAGGAAGGATGCCCGCCTCCATCATTCCAGGCACCCTGGT +
Preference number: 5 (lower is better)
Translates to: GRTRDVSAGGHVGGE*SRKDARLHHSRHPG
Trigger: ACCAGGGTGCCTGGAATGATGGAGGCGGGCATCCTTCCTGGACCACTCTCCACCCACATGTCCACCTGCCGAGACATCCCGGGTCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS TCA 90 bp CCTAGGAGGGCCCTGGTGACTCGAGCTTGTTGGCGATCATCTGGCTaGCCTTGTGCAGGGCCTCCTGGAACTGGGGGTACTCGTCCCGCA +
Preference number: 5 (lower is better)
Translates to: PRRALVTRACWRSSG*PCAGPPGTGGTRPA
Trigger: TGCGGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCAACAAGCTCGAGTCACCAGGGCCCTCCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS GCA 90 bp TTCGTCTTCTGCTTCCTCGTCACTCCCCTCGGACTCCACTCTCTCTaGCATGGCCCCCTCCTCGGTGCTGGGCTGCTGGATCTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: FVFCFLVTPLGLHSL*HGPLLGAGLLDLVL
Trigger: CAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCCGAGGGGAGTGACGAGGAAGCAGAAGACGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS GCA 90 bp TGTCTCGGCAGGTGGACATGTGGGTGGAGAGTGGTCCAGGAAGGATaGCCGCCTCCATCATTCCAGGCACCCTGGTGCTTTGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: CLGRWTCGWRVVQEG*PPPSFQAPWCFGSP
Trigger: GGGGCTGCCAAAGCACCAGGGTGCCTGGAATGATGGAGGCGGGCATCCTTCCTGGACCACTCTCCACCCACATGTCCACCTGCCGAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp CTTCTGCTTCCTCGTCACTCCCCTCGGACTCCACTCTCTCTGCCATaGCCCCCTCCTCGGTGCTGGGCTGCTGGATCTGGTCCTGGAACA +
Preference number: 5 (lower is better)
Translates to: LLLPRHSPRTPLSLP*PPPRCWAAGSGPGT
Trigger: TGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCCGAGGGGAGTGACGAGGAAGCAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS CCA 90 bp ACCTTGACCATCTCCTGCTGCAGGCGCAGCCAGGTCACCTGGGCCTaGACCGCCTTGCCATCGTGCTCGTCGATCAGCTTGCTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: TLTISCCRRSQVTWA*TALPSCSSISLLSL
Trigger: AAGGCTGAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCTGCGCCTGCAGCAGGAGATGGTCAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 90 bp TGTGTCACCTTGACCATCTCCTGCTGCAGGCGCAGCCAGGTCACCTaGGCCTGGACCGCCTTGCCATCGTGCTCGTCGATCAGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: CVTLTISCCRRSQVT*AWTALPSCSSISLL
Trigger: GAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCTGCGCCTGCAGCAGGAGATGGTCAAGGTGACACA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 90 bp TGCGAGACGAACTCCTCCAGGTCTGAGGACTCGATGTCGCTCCCGTaGCTCAGCCGGAAGCGGTGCTGGACGCCCATTGGGAGCACTGAT +
Preference number: 5 (lower is better)
Translates to: CETNSSRSEDSMSLP*LSRKRCWTPIGSTD
Trigger: ATCAGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTCGTCTCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS CCA 90 bp ACCCAAGACCGGGCAGGACCCGGGATGTCTCGGCAGGTGGACATGTaGGTGGAGAGTGGTCCAGGAAGGATGCCCGCCTCCATCATTCCA +
Preference number: 5 (lower is better)
Translates to: TQDRAGPGMSRQVDM*VESGPGRMPASIIP
Trigger: TGGAATGATGGAGGCGGGCATCCTTCCTGGACCACTCTCCACCCACATGTCCACCTGCCGAGACATCCCGGGTCCTGCCCGGTCTTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS-3UTR CAA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTGGGCTCGGCTCTGCTaGGTAGCCACAACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFWARLC*VATTSS
Trigger: AGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCA...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS GCA 90 bp GGAGGGGAAGTTAAAGCTCAGCGGGTGAGACACGTGCCACCACAGTaGCCGGCTTTTTCTTTCCGCGTCCCGAGACCTGGTCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: GGEVKAQRVRHVPPQ*PAFSFRVPRPGHPG
Trigger: CCCAGGGTGACCAGGTCTCGGGACGCGGAAAGAAAAAGCCGGGCACTGTGGTGGCACGTGTCTCACCCGCTGAGCTTTAACTTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS GCA 90 bp TCGGTGGCCTTGCGAACGTCCCTGATTTTCCGGCGCAGCTCAAGCTaGTTGTGGTGGAAGTCGGTGCGGGTGAGCGCCTTCCTGTCCATC +
Preference number: 5 (lower is better)
Translates to: SVALRTSLIFRRSSS*LWWKSVRVSAFLSI
Trigger: GATGGACAGGAAGGCGCTCACCCGCACCGACTTCCACCACAAGCAGCTTGAGCTGCGCCGGAAAATCAGGGACGTTCGCAAGGCCACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS GCA 90 bp CTCCCCTGGGAGGTGCCCACGTCCCAGAGCTCGTCTCAGCATCACTaGAGGGCCGGGCACGGCGGCTCTTACTTTCTACTCGTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: LPWEVPTSQSSSQHH*RAGHGGSYFLLVVS
Trigger: AGAAACTACGAGTAGAAAGTAAGAGCCGCCGTGCCCGGCCCTGCAGTGATGCTGAGACGAGCTCTGGGACGTGGGCACCTCCCAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp TTGTTGGCGATCATCTGGCTGACCTTGTGCAGGGCCTCCTGGAACTaGGGGTACTCGTCCCGCACGCGGTCCAGGATGGTGGCGATGAGA +
Preference number: 5 (lower is better)
Translates to: LLAIIWLTLCRASWN*GYSSRTRSRMVAMR
Trigger: TCTCATCGCCACCATCCTGGACCGCGTGCGGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 90 bp TCAGGGCTACTCACCAATCTGCCCACTGCTGGCCCAGAGGTGACCTaGCCCATTTGCTCCGACGGGCCTAAGACTCCGTGGGATGGCTCT +
Preference number: 5 (lower is better)
Translates to: SGLLTNLPTAGPEVT*PICSDGPKTPWDGS
Trigger: AGAGCCATCCCACGGAGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGGTGAGTAGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572083.5
CDS CCA 90 bp CTGTGTGAGTGGCATGTTCCATGGCCGTCATCCCCAGGGACCTCCTaGGACACGTTTACCTGTCGTTTGAGGGCCCCAAGCCGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LCEWHVPWPSSPGTS*DTFTCRLRAPSRVR
Trigger: CCTCACCCGGCTTGGGGCCCTCAAACGACAGGTAAACGTGTCCCAGGAGGTCCCTGGGGATGACGGCCATGGAACATGCCACTCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS-3UTR CAA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCACTCGCCCTGGATGGCTaGGCGGATGGCCTGCAACTC +
Preference number: 5 (lower is better)
Translates to: AALTFPPLLSPPACGPVALALDG*ADGLQL
Trigger: GAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGAG...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGCTGGGGCGTAGTCCCTaGGTGTGGACGCCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLLGRSP*VWTPQR
Trigger: ACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAG...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS TCA 90 bp GCCCCAAGCCGGGTGAGGTCGGCCTCGAGTGTGTCGAAGTCTGCCTaGATCACCGACAGCTTTTCCTGCTTCTCTAGGAGGGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: APSRVRSASSVSKSA*ITDSFSCFSRRELL
Trigger: GAGCAGCTCCCTCCTAGAGAAGCAGGAAAAGCTGTCGGTGATTCAGGCAGACTTCGACACACTCGAGGCCGACCTCACCCGGCTTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS TCA 90 bp TCTTTTTGGCTGCTAAGCTCCCAAAGCCTGGTCCTCCAACGGAACTaGGAGGACCTGCCTGTGGGGACAGCCAGCAGGTGTGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SFWLLSSQSLVLQRN*EDLPVGTASRCGQG
Trigger: GCCCTGCCCACACCTGCTGGCTGTCCCCACAGGCAGGTCCTCTCAGTTCCGTTGGAGGACCAGGCTTTGGGAGCTTAGCAGCCAAAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 90 bp TGCAGGCGCAGCCAGGTCACCTGGGCCTGGACCGCCTTGCCATCGTaGTCGTCGATCAGCTTGCTCAGCCTTTTGATTTCAAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CRRSQVTWAWTALPS*SSISLLSLLISSSR
Trigger: CCTGGAGCTTGAAATCAAAAGGCTGAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCTGCGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS GCA 90 bp TTCAGGAGGGTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTaGATCTTGATGGTCTCCCTCTCAGAGGCCCCCGCCCTCCATCGT +
Preference number: 5 (lower is better)
Translates to: FRRVAFSSLSWFSLS*ILMVSLSEAPALHR
Trigger: ACGATGGAGGGCGGGGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGACCCTCCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS GCA 90 bp GTGAGTATCATTTGTTCCTGGAGACAAGGAGCCACAGGGTGCACGTaGCTGAAGAGGCACCACCGTGCGCCAGGTGTGACCTGTGGGGCG +
Preference number: 5 (lower is better)
Translates to: VSIICSWRQGATGCT*LKRHHRAPGVTCGA
Trigger: CGCCCCACAGGTCACACCTGGCGCACGGTGGTGCCTCTTCAGGCACGTGCACCCTGTGGCTCCTTGTCTCCAGGAACAAATGATACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 90 bp TTCAGGAGGGTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTaGATCTTGATGGTCTCCCTCTCAGAGGCCTGCATGGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: FRRVAFSSLSWFSLS*ILMVSLSEACMGEG
Trigger: CCCCTCCCCCATGCAGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGACCCTCCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp TCTGTGGATCCTGTCAATCTGCCCACTGCTGGCCCAGAGGTGACCTaGCCCATTTGCTCCGACGGGCCTAAGACTCCGTGGGATGGCTCT +
Preference number: 5 (lower is better)
Translates to: SVDPVNLPTAGPEVT*PICSDGPKTPWDGS
Trigger: AGAGCCATCCCACGGAGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS-3UTR CAA 90 bp AGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCCTTGGACCGGTGGCCTCTaGCTGGAAGCCTTGGAGACC +
Preference number: 5 (lower is better)
Translates to: SCQGTLKHRCRGRDCHNPWTGGL*LEALET
Trigger: GGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCCA...AGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGTGGACCGGTGGCCTCTaGCTGGAAGCCTTGGAGACC +
Preference number: 5 (lower is better)
Translates to: RLGRSPLVWTPQRALISVWTGGL*LEALET
Trigger: GGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCCA...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTTTTTTGCGCTCCTCGTaGGCGGCTGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAFLRSS*AAAQVL
Trigger: CAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAA...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CAA 90 bp TGGCTGCGGGTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCGCCTTTCTTGAGCGCTaGCTGTATGCCAGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: WLRVLWGQPDPHSLVQPFAFLER*LYARLC
Trigger: ACAGAGCCTGGCATACAGCAAGCGCTCAAGAAAGGC...GAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCACCCGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS TCA 90 bp GCTGGCATCCTCTGTAGAAATGCAGCGGGGAGAGCCAGTTACGTGTaGGACATCAGAGAGCCAGTGCACAGAGCTGCGCCCCACACGAGG +
Preference number: 5 (lower is better)
Translates to: AGILCRNAAGRASYV*DIREPVHRAAPHTR
Trigger: CCTCGTGTGGGGCGCAGCTCTGTGCACTGGCTCTCTGATGTCTCACACGTAACTGGCTCTCCCCGCTGCATTTCTACAGAGGATGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS TCA 90 bp CCAGCTCGCCCTGGATGGCTTGGCGGATGGCCTGCAACTCCTCCGTaGGTATCATTTGTTCCTGGAGACAAGGAGCCACAGGGTGCACGT +
Preference number: 5 (lower is better)
Translates to: PARPGWLGGWPATPP*VSFVPGDKEPQGAR
Trigger: ACGTGCACCCTGTGGCTCCTTGTCTCCAGGAACAAATGATACTCACGGAGGAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 90 bp TTCAGGAGGGTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTaGATCTTGATGGTCTCCCTCTCAGAGGCCTTCAGCGAGCGCACG +
Preference number: 5 (lower is better)
Translates to: FRRVAFSSLSWFSLS*ILMVSLSEAFSERT
Trigger: CGTGCGCTCGCTGAAGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGACCCTCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
ENST00000575431.1
CDS GCA 90 bp ATGCAGCGGGGAGAGCCAGTTACGTGTGAGACATCAGAGAGCCAGTaGACAGAGCTGCGCCCCACACGAGGGAGCTCACTAAGGCGAACT +
Preference number: 5 (lower is better)
Translates to: MQRGEPVTCETSESQ*TELRPTRGSSLRRT
Trigger: AGTTCGCCTTAGTGAGCTCCCTCGTGTGGGGCGCAGCTCTGTGCACTGGCTCTCTGATGTCTCACACGTAACTGGCTCTCCCCGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 90 bp CCTGGCAGGACCCTGGCTTTTCCCGTGCCAGTGTTTCCACCTGAGTaGCCTGGCTTGGCGGGGATGATAACCTTCCATGCTCCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: PGRTLAFPVPVFPPE*PGLAGMITFHAPLS
Trigger: TGAGAGAGGAGCATGGAAGGTTATCATCCCCGCCAAGCCAGGGCACTCAGGTGGAAACACTGGCACGGGAAAAGCCAGGGTCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS-3UTR CAA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTTGGGCTCGGCTCTGCTaGGTAGCCACAACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCWARLC*VATTSS
Trigger: AGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCA...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATTTTTTGCGCTCCTCGTaGGCGGCTGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNFLRSS*AAAQVL
Trigger: CAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAA...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp CTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATAGAGCCGCCAACTTTTaGCGCTCCTCGTTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: LSCQGTLKHRCRGRDCHNRAANF*RSSLAA
Trigger: AGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCT...ATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGAGAGCCGCCAACTTTTaGCGCTCCTCGTTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: RLGRSPLVWTPQRALISVRAANF*RSSLAA
Trigger: AGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCT...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCAGGCTGCTGGCCCATaGCTGCATGATGCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCQAAGP*LHDAPL
Trigger: AAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTG...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTTGGGCCTGGACCGCCTaGCCATCGTGCTCGTCGATC +
Preference number: 5 (lower is better)
Translates to: SVLTLLRVSGATDFLLQAWAWTA*PSCSSI
Trigger: GATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCA...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGAAAGGTTCTGTCGTTaGAGGGCCCCAAGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: AALTFPPLLSPPACGPVAERFCR*RAPSRV
Trigger: CACCCGGCTTGGGGCCCTCAAACGACAGAACCTTTC...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp CAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGAGAGGACACTCAGGGAGAGGAGCCCTaGCCCGGCCACAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: QKEAMSLRAMRTVCREDTQGEEP*PGHSWL
Trigger: GAGCCAGCTGTGGCCGGGCAAGGGCTCCTCTCCCTG...AGTGTCCTCTCTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS TCA 90 bp ACCCACGTGTGGCTGGAGACTGGGACTCACTCTGCTTCCACCAGTTaGTTCAGGAGGGTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: THVWLETGTHSASTS*FRRVAFSSLSWFSL
Trigger: CAAGCTGAACCAGCTCAGCGAGGAGAAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAGTGAGTCCCAGTCTCCAGCCACACGTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS GCA 90 bp GAGACCATCCGCTCCAGCTGCTTGTTGAGGAAGTTGATGAGCCCTTaGTTCCTCTCGATCAGGATCGTGCGCCGGGAGATCTCGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ETIRSSCLLRKLMSP*FLSIRIVRREISLW
Trigger: CCAGAGCGAGATCTCCCGGCGCACGATCCTGATCGAGAGGAAGCAAGGGCTCATCAACTTCCTCAACAAGCAGCTGGAGCGGATGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS GCA 90 bp TCCTCCGTGAGTATCATTTGTTCCTGGAGACAAGGAGCCACAGGGTaGACGTGCCTGAAGAGGCACCACCGTGCGCCAGGTGTGACCTGT +
Preference number: 5 (lower is better)
Translates to: SSVSIICSWRQGATG*TCLKRHHRAPGVTC
Trigger: ACAGGTCACACCTGGCGCACGGTGGTGCCTCTTCAGGCACGTGCACCCTGTGGCTCCTTGTCTCCAGGAACAAATGATACTCACGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 90 bp CAGGGCCGGGCACGGCGGCTCTTACTTTCTACTCGTAGTTTCTTCTaGTCCATGATGTGGAGCTCCTTCTTGGATGCGTCCAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QGRARRLLLSTRSFF*SMMWSSFLDASREA
Trigger: GGCCTCCCTGGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGTAAGAGCCGCCGTGCCCGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp ACAGTGCCCGGCTTTTTCTTTCCGCGTCCCGAGACCTGGTCACCCTaGGTGGTTTTAGGAATGAAGGCAGCACCTGTGTCTCCAACGCCC +
Preference number: 5 (lower is better)
Translates to: TVPGFFFPRPETWSP*VVLGMKAAPVSPTP
Trigger: GGGCGTTGGAGACACAGGTGCTGCCTTCATTCCTAAAACCACCCAGGGTGACCAGGTCTCGGGACGCGGAAAGAAAAAGCCGGGCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS CCA 90 bp CGTGCCACCACAGTGCCCGGCTTTTTCTTTCCGCGTCCCGAGACCTaGTCACCCTGGGTGGTTTTAGGAATGAAGGCAGCACCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: RATTVPGFFFPRPET*SPWVVLGMKAAPVS
Trigger: AGACACAGGTGCTGCCTTCATTCCTAAAACCACCCAGGGTGACCAGGTCTCGGGACGCGGAAAGAAAAAGCCGGGCACTGTGGTGGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS CCA 90 bp TCGTTGACTTTCTTCACGTCCTGGTCCAGCTCCACCAGGGTCTTCTaGTGTGCGTCCAGCCTGCTGCTGGTGTGTGTGATGTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SLTFFTSWSSSTRVF*CASSLLLVCVMSRV
Trigger: CACCCTGGACATCACACACACCAGCAGCAGGCTGGACGCACACCAGAAGACCCTGGTGGAGCTGGACCAGGACGTGAAGAAAGTCAACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 90 bp TCGCTCTGGCTGTTGGTGATGAGCTCGTTGACTTTCTTCACGTCCTaGTCCAGCTCCACCAGGGTCTTCTGGTGTGCGTCCAGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLWLLVMSSLTFFTS*SSSTRVFWCASSLL
Trigger: CAGCAGGCTGGACGCACACCAGAAGACCCTGGTGGAGCTGGACCAGGACGTGAAGAAAGTCAACGAGCTCATCACCAACAGCCAGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 90 bp AGGAAAAAGACACCCAAGTGGGCAGATGGCCAAGTCCTCTCGTCCTaGTGTTCAGGCAACCCTGGTGACACAGGGAGAGGAGCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: RKKTPKWADGQVLSS*CSGNPGDTGRGALA
Trigger: GGCAAGGGCTCCTCTCCCTGTGTCACCAGGGTTGCCTGAACACCAGGACGAGAGGACTTGGCCATCTGCCCACTTGGGTGTCTTTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS CCA 90 bp CTCCATAGGGTCTTTTGGGACTTGCTACTCACCAACAGACGGGTTTaGGCAACCCAAGAAGGGCAGGGCGAGAGGCAGCAGGACCTCCGA +
Preference number: 5 (lower is better)
Translates to: LHRVFWDLLLTNRRV*ATQEGQGERQQDLR
Trigger: TCGGAGGTCCTGCTGCCTCTCGCCCTGCCCTTCTTGGGTTGCCCAAACCCGTCTGTTGGTGAGTAGCAAGTCCCAAAAGACCCTATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp GGGGCTGGTGCCCTCTATCCCGGCACCGAGGGCAGGGCTGCAGGCTaGATTTCTAATACCCCTACAAGCATCTTGAACGGGTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: GAGALYPGTEGRAAG*ISNTPTSILNGCGN
Trigger: ATTTCCACACCCGTTCAAGATGCTTGTAGGGGTATTAGAAATCCAGCCTGCAGCCCTGCCCTCGGTGCCGGGATAGAGGGCACCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS-3UTR CAA 90 bp AGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTCACAATCCTCCTCCCCCTCTTCAATaGCAGCTTCCGCTTGGGTTG +
Preference number: 5 (lower is better)
Translates to: SCQGTLKHRCRGRDCHNPPPPLQ*QLPLGL
Trigger: CAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAGG...AGGATTGTGACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTGCTCGCTCGAGGCCATaGCGTGGCGGTCGTGACTCT +
Preference number: 5 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSARSRP*RGGRDS
Trigger: AGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGC...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CAA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGCAGGCTGCTGGCCCATaGCTGCATGATGCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTQAAGP*LHDAPL
Trigger: AAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTG...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTCCAGACCCTCATTCCTaGGTCCAGCCTTTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAPDPHS*VQPFLS
Trigger: GCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGG...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CAA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTCGCAGCTCAAGCTGCTaGTGGTGGAAGTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: SVLTLLRVSGATDFLLQARSSSC*WWKSVR
Trigger: CCGCACCGACTTCCACCACAAGCAGCTTGAGCTGCG...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTCTCTTCCTGGAGGCCTaGCAAGGCGGAGTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SVLTLLRVSGATDFLLQALFLEA*QGGVQA
Trigger: AGCCTGGACTCCGCCTTGCAAGGCCTCCAGGAAGAG...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS GCA 90 bp AGTGACCTTCATGACCCACGTGTGGCTGGAGACTGGGACTCACTCTaGTTCCACCAGTTGATTCAGGAGGGTCGCCTTCTCCTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: SDLHDPRVAGDWDSL*FHQLIQEGRLLLAE
Trigger: CTCAGCGAGGAGAAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAGTGAGTCCCAGTCTCCAGCCACACGTGGGTCATGAAGGTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS GCA 90 bp ACACCTGGCCTCCTACATGGTCTTCAACGGACAGAGGCCTGTAGGTaGAGTGACCTTCATGACCCACGTGTGGCTGGAGACTGGGACTCA +
Preference number: 5 (lower is better)
Translates to: TPGLLHGLQRTEACR*SDLHDPRVAGDWDS
Trigger: TGAGTCCCAGTCTCCAGCCACACGTGGGTCATGAAGGTCACTGCACCTACAGGCCTCTGTCCGTTGAAGACCATGTAGGAGGCCAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS CCA 90 bp CCTTGCTTCCTCTCGATCAGGATCGTGCGCCGGGAGATCTCGCTCTaGCTGTTGGTGATGAGCTCGTTGACTTTCTTCACGTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PCFLSIRIVRREISL*LLVMSSLTFFTSWS
Trigger: GGACCAGGACGTGAAGAAAGTCAACGAGCTCATCACCAACAGCCAGAGCGAGATCTCCCGGCGCACGATCCTGATCGAGAGGAAGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 90 bp GCCTGTAGGTGCAGTGACCTTCATGACCCACGTGTGGCTGGAGACTaGGACTCACTCTGCTTCCACCAGTTGATTCAGGAGGGTCGCCTT +
Preference number: 5 (lower is better)
Translates to: ACRCSDLHDPRVAGD*DSLCFHQLIQEGRL
Trigger: AAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAGTGAGTCCCAGTCTCCAGCCACACGTGGGTCATGAAGGTCACTGCACCTACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS-3UTR CAA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTTGGACCGGTGGCCTCTaGCTGGAAGCCTTGGAGACC +
Preference number: 5 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSWTGGL*LEALET
Trigger: GGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCCA...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CAA 90 bp GCTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTGGGCTCGGCTCTGCTaGGTAGCCACAACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: AANQSVTWTSKPSVGVWVWARLC*VATTSS
Trigger: AGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCA...CACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp AGCCACAACCAGCTCTTGGAGGTCCAGCTTCAACTTTTCGATCTGTCGGTTCAGGCTCGCTCGAGGCCATaGCGTGGCGGTCGTGACTCT +
Preference number: 5 (lower is better)
Translates to: SHNQLLEVQLQLFDLSVQARSRP*RGGRDS
Trigger: AGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGC...CTGAACCGACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CAA 90 bp GTGCTGTGGGGCCAGCCAGACCCTCATTCCTTGGTCCAGCCTTTCTTGAGCGCTGGCCTTCTTTACCACTaGTGTCATCACGCGGATGTC +
Preference number: 5 (lower is better)
Translates to: VLWGQPDPHSLVQPFLSAGLLYH*CHHADV
Trigger: GACATCCGCGTGATGACACAAGTGGTAAAGAAGGCC...AGCGCTCAAGAAAGGCTGGACCAAGGAATGAGGGTCTGGCTGGCCCCACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CAA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCACGCTCCAGCTGCTTGTaGAGGAAGTTGATGAGCCCT +
Preference number: 5 (lower is better)
Translates to: AALTFPPLLSPPACGPVARSSCL*RKLMSP
Trigger: AGGGCTCATCAACTTCCTCAACAAGCAGCTGGAGCG...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS TCA 90 bp GGGCACGGCGGCTCTTACTTTCTACTCGTAGTTTCTTCTGCTCCATaGTGTGGAGCTCCTTCTTGGATGCGTCCAGGGAGGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: GHGGSYFLLVVSSAP*CGAPSWMRPGRPAA
Trigger: AGCAGCTGGCCTCCCTGGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGTAAGAGCCGCCGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp CGGCGGCTCTTACTTTCTACTCGTAGTTTCTTCTGCTCCATGATGTaGAGCTCCTTCTTGGATGCGTCCAGGGAGGCCAGCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RRLLLSTRSFFCSMM*SSFLDASREASCSS
Trigger: GGAGGAGCAGCTGGCCTCCCTGGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGTAAGAGCCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS-3UTR CAA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCAGAGCCGCCAACTTTTaGCGCTCCTCGTTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFRAANF*RSSLAA
Trigger: AGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCT...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CAA 90 bp AACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCTGCCGGGGGCGTGACTGTGGCCTTCTTTACCACTaGTGTCATCACGCGGATGTC +
Preference number: 5 (lower is better)
Translates to: NMLSCQGTLKHRCRGRDCGLLYH*CHHADV
Trigger: GACATCCGCGTGATGACACAAGTGGTAAAGAAGGCC...ACAGTCACGCCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAAATGTCTTCTTCCAGTaGCTGGGCTCGAGTGGTGAG +
Preference number: 5 (lower is better)
Translates to: AALTFPPLLSPPACGPVANVFFQ*LGSSGE
Trigger: CTCACCACTCGAGCCCAGCAACTGGAAGAAGACATT...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GGCACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCCGGGTGTCCTCAGCTaGGGCCAAGTACTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: GTVLKCDNMLSCQGTLKHPGVLS*GQVLSL
Trigger: GAGGCTCAGTACTTGGCCCAAGCTGAGGACACCCGG...GTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp TCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAGCGTTGTGTTGTGTATTTGGTGGTCTTGTaGGAGGTCATGTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SHLCSAHQLVDLWQRCVVYLVVL*EVMCSC
Trigger: GCAGGAGCACATGACCTCCAACAAGACCACCAAATA...CACAACACAACGCTGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GCTGCCTTAACTTTCCCACCTCTGCTCAGCCCACCAGCTTGTGGACCTGTGGCAAGCTTCTTCAGGTCGTaGTCCAGGTCCTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: AALTFPPLLSPPACGPVASFFRS*SRSFMW
Trigger: CCACATGAAGGACCTGGACAACGACCTGAAGAAGCT...TGCCACAGGTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGAGCTTGTCCTGCATCTaGATGGTCTCCCTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RLGRSPLVWTPQRALISVSLSCI*MVSLSE
Trigger: CTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCT...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp AGACTGGGGCGTAGTCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGTTCTGCTTCCACCAGTaGATTCAGGAGGGTCGCCTT +
Preference number: 5 (lower is better)
Translates to: RLGRSPLVWTPQRALISVFCFHQ*IQEGRL
Trigger: AAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAA...CACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGACTACGCCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCATGAGAGCCAGTCGCTaGTCCAGGCGCTGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSMRASR*SRRWRS
Trigger: GGAGCGCCAGCGCCTGGACAAGCGACTGGCTCTCAT...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGGAAGCCCCAAGGTCATaGGTACTTGGAAGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLEAPRS*VLGSPG
Trigger: CCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTC...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GGACAACAGGACCATCTCGGAGGTGACGTCTTCCCTTGGGGACGCTGCAGGGTTAGAGAGAACCTGGCCTaGACTTTTCTTAAGGCCCGT +
Preference number: 5 (lower is better)
Translates to: GQQDHLGGDVFPWGRCRVRENLA*TFLKAR
Trigger: ACGGGCCTTAAGAAAAGTCAAGGCCAGGTTCTCTCT...AACCCTGCAGCGTCCCCAAGGGAAGACGTCACCTCCGAGATGGTCCTGTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS GCA 90 bp GGACACCGATACTCAGCTGACAGCTCCATAGGGTCTTTTGGGACTTaGTACTCACCAACAGACGGGTTTGGGCAACCCAAGAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GHRYSADSSIGSFGT*YSPTDGFGQPKKGR
Trigger: CCTGCCCTTCTTGGGTTGCCCAAACCCGTCTGTTGGTGAGTAGCAAGTCCCAAAAGACCCTATGGAGCTGTCAGCTGAGTATCGGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp ACTTCCTCAGGATGCTCTGTGCTACCGACAGCTTCTTCACCTTTCTaGCCATCATCCTTCTCTGGTGGTGACACCTGGAGCGGTGAACGG +
Preference number: 5 (lower is better)
Translates to: TSSGCSVLPTASSPF*PSSFSGGDTWSGER
Trigger: CCGTTCACCGCTCCAGGTGTCACCACCAGAGAAGGATGATGGCCAGAAAGGTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572270.1
CDS CCA 90 bp AAATCACAAAGCCACAAACATGTGAGCAGCCGGTGGTGCTATTACTaGCCTGGGATCAGGAGAGGCCGTGACCTGATCAGGAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: KSQSHKHVSSRWCYY*PGIRRGRDLIRRGR
Trigger: ACGGCCTCTCCTGATCAGGTCACGGCCTCTCCTGATCCCAGGCCAGTAATAGCACCACCGGCTGCTCACATGTTTGTGGCTTTGTGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS-3UTR CAA 90 bp GGTCCAGCTTCAACTTTTCGATCTGTCGGTTCAGGTAGTTCTTCAGGGCAGCCTTGGGCTCGGCTCTGCTaGGTAGCCACAACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GPASTFRSVGSGSSSGQPWARLC*VATTSS
Trigger: AGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCA...AGGCTGCCCTGAAGAACTACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CAA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGGGCCTTCTTTACCACTaGTGTCATCACGCGGATGTC +
Preference number: 5 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTGLLYH*CHHADV
Trigger: GACATCCGCGTGATGACACAAGTGGTAAAGAAGGCC...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp TCCTATGGGTGGGGCTGGCTTATTTCTCTTAAACGATGCCCTTCTGAGGGTACACCGGGTGTCCTCAGCTaGGGCCAAGTACTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: SYGWGWLISLKRCPSEGTPGVLS*GQVLSL
Trigger: GAGGCTCAGTACTTGGCCCAAGCTGAGGACACCCGG...TGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGTCGGTGGATTTGGCTaGATGCTGGCATCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SVLTLLRVSGATDFLLQAVGGFG*MLASSE
Trigger: CTCAGAGGATGCCAGCATCAAGCCAAATCCACCGAC...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGCTCCGTGAGTATCATTaGTTCCAGCTGGTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTLREYH*FQLVLA
Trigger: AGCCAGGACCAGCTGGAACAAATGATACTCACGGAG...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCTCGCCCTGGATGGCTaGGCGGATGGCCTGCAACTC +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTLALDG*ADGLQL
Trigger: GAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGAG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCAGTTCCAGGACGGTTTaGGTGCACTCATCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LQRSPKVIGTWKSREKERSSRTV*VHSSVA
Trigger: GGCCACCGATGAGTGCACCAAAACCGTCCTGGAACT...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCCCTGGTGACTCGAGCTaGTTGGCGATCATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LQRSPKVIGTWKSREKERPGDSS*LAIIWL
Trigger: CAGCCAGATGATCGCCAACAAGCTCGAGTCACCAGG...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp CCTAGCATTGGGGCAGGAGGAAAAAGACACCCAAGTGGGCAGATGGCCAAGTCCGGCAATGAGGACGGTTaGCAGAGAGGACACTGGTTA +
Preference number: 5 (lower is better)
Translates to: PSIGAGGKRHPSGQMAKSGNEDG*QRGHWL
Trigger: TAACCAGTGTCCTCTCTGCAAACCGTCCTCATTGCC...GGACTTGGCCATCTGCCCACTTGGGTGTCTTTTTCCTCCTGCCCCAATGCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS TCA 90 bp CTGTCTCCACCTCCCCCTCTTCAATTGCAGCTTCCGCTTGGGTTGTaGCTTCCTCAGGATGCTCTGTGCTACCGACAGCTTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: LSPPPPLQLQLPLGL*LPQDALCYRQLLHL
Trigger: AAGGTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAGGTGGAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000572083.5
ENST00000572270.1
ENST00000574099.1
ENST00000576033.5
ENST00000576241.1
CDS GCA 90 bp GCCTTCAGCGAGCGCACGAACTCATTCTCTGTCACCCGGTTGTTCTaGTCCAGCTCCTCCGAGCTGCACCGGTTTTTATTCATCAACATG +
Preference number: 5 (lower is better)
Translates to: AFSERTNSFSVTRLF*SSSSELHRFLFINM
Trigger: CATGTTGATGAATAAAAACCGGTGCAGCTCGGAGGAGCTGGAGCAGAACAACCGGGTGACAGAGAATGAGTTCGTGCGCTCGCTGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
ENST00000575431.1
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTGGACCGGTGGCCTCTaGCTGGAAGCCTTGGAGACC +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTWTGGL*LEALET
Trigger: GGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCCA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTAGCCACAACCAGCTCTaGGAGGTCCAGCTTCAACTT +
Preference number: 5 (lower is better)
Translates to: SVLTLLRVSGATDFLLQASHNQL*EVQLQL
Trigger: AAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCT...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp TTGCAACCAAAAGGAAGCCATGTCTCTGAGGGCAATGAGGACGGTTTGCAGAGACAGGCTGCTGGCCCATaGCTGCATGATGCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: LQPKGSHVSEGNEDGLQRQAAGP*LHDAPL
Trigger: AAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTG...TCTCTGCAAACCGTCCTCATTGCCCTCAGAGACATGGCTTCCTTTTGGTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS-3UTR CAA 90 bp TCCCTTGGTGTGGACGCCCCAGCGTGCTCTTATTTCAGTGCTCACCCTGTTACGGAAGTTGATGAGCCCTaGCTTCCTCTCGATCAGGAT +
Preference number: 5 (lower is better)
Translates to: SLGVDAPACSYFSAHPVTEVDEP*LPLDQD
Trigger: ATCCTGATCGAGAGGAAGCAAGGGCTCATCAACTTC...CGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACACCAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTATCCGCTCCAGCTGCTaGTTGAGGAAGTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: SVLTLLRVSGATDFLLQAIRSSC*LRKLMS
Trigger: GCTCATCAACTTCCTCAACAAGCAGCTGGAGCGGAT...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp CTGCAAACCAAAGTGTTACCTGGACGAGTAAGCCCAGTGTGGGAGTGTGGGTGTTCACAGGCTCTGTCTTaGCGATGGGATGCCATGGGA +
Preference number: 5 (lower is better)
Translates to: LQTKVLPGRVSPVWECGCSQALS*RWDAMG
Trigger: TCCCATGGCATCCCATCGCAAAGACAGAGCCTGTGA...ACACCCACACTCCCACACTGGGCTTACTCGTCCAGGTAACACTTTGGTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS TCA 90 bp TTCTGGGGCATCAATGGCACAGCTGCTGTCATGCCTCATGCAGCATaGTGGGAAAGTGACAGCAAAAGCATCCCAACGGTCTGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: FWGINGTAAVMPHAA*WESDSKSIPTVCGS
Trigger: TGACCCACAGACCGTTGGGATGCTTTTGCTGTCACTTTCCCATCATGCTGCATGAGGCATGACAGCAGCTGTGCCATTGATGCCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574799.5
CDS GCA 90 bp CCCTCTTCAATTGCAGCTTCCGCTTGGGTTGTGACTTCCTCAGGATaGTCTGTGCTACCGACAGCTTCTTCACCTTTCTGGCCATCATCC +
Preference number: 5 (lower is better)
Translates to: PSSIAASAWVVTSSG*SVLPTASSPFWPSS
Trigger: GGATGATGGCCAGAAAGGTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATTGAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000572083.5
ENST00000572270.1
ENST00000574099.1
ENST00000576033.5
ENST00000576241.1
CDS GCA 90 bp ACCTTCAGCGAGCGCACGAACTCATTCTCTGTCACCCGGTTGTTCTaGTCCAGCTCCTCCGAGCTGCACCGGTTTTTATTCATCAACATG +
Preference number: 5 (lower is better)
Translates to: TFSERTNSFSVTRLF*SSSSELHRFLFINM
Trigger: CATGTTGATGAATAAAAACCGGTGCAGCTCGGAGGAGCTGGAGCAGAACAACCGGGTGACAGAGAATGAGTTCGTGCGCTCGCTGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp TGCTCAATCTTGCTTTCTACTCGTAGTTTCTTCTGCTCCATGATGTaGAGCTCCTTCTTGGATGCGTCCAGGGAGGCCAGCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CSILLSTRSFFCSMM*SSFLDASREASCSS
Trigger: GGAGGAGCAGCTGGCCTCCCTGGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGCAAGATTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS-3UTR CAA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTAATTGCAGCTTCCGCTaGGGTTGTGACTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSNCSFR*GCDFLR
Trigger: CCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATT...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CAA 90 bp AGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCAGCCACAACCAGCTCTaGGAGGTCCAGCTTCAACTT +
Preference number: 5 (lower is better)
Translates to: RVQWRDLGSLQPPQFKQFSHNQL*EVQLQL
Trigger: AAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCT...GAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CAA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGTTTTTGCGCTCCTCGTaGGCGGCTGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: KLQRSPKVIGTWKSREKEFLRSS*AAAQVL
Trigger: CAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAA...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCCAGGCTGCTGGCCCATaGCTGCATGATGCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTQAAGP*LHDAPL
Trigger: AAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTG...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp GTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCGCAATTCAAGCAGTTCTCTAAAAGCATCTCCTGGTaGTGTGACTGCTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VQWRDLGSLQPPQFKQFSKSISW*CDCCWL
Trigger: CAGCCAGCAGCAGTCACACAACCAGGAGATGCTTTT...AGAGAACTGCTTGAATTGCGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS-3UTR CAA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCATCTCGCTCTGGCTGTaGGTGATGAGCTCGTTGACT +
Preference number: 5 (lower is better)
Translates to: LQRSPKVIGTWKSREKERISLWL*VMSSLT
Trigger: AGTCAACGAGCTCATCACCAACAGCCAGAGCGAGAT...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCTTCTCTGTCACCCGGTaGTTCTGCTCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSFSVTR*FCSSSS
Trigger: GGAGGAGCTGGAGCAGAACAACCGGGTGACAGAGAA...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp TCCTATGGGTGGGGCTGGCTTATTTCTCTTAAACGATGCCCTTCTGAGGGTACAAGCACTAGGGACTGCTaGGAGCGGAACAGGAACACG +
Preference number: 5 (lower is better)
Translates to: SYGWGWLISLKRCPSEGTSTRDC*ERNRNT
Trigger: CGTGTTCCTGTTCCGCTCCAAGCAGTCCCTAGTGCT...TGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAAGCCAGCCCCACCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGGTGACTCGAGCTTGTaGGCGATCATCTGGCTGACC +
Preference number: 5 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSGDSSL*AIIWLT
Trigger: GGTCAGCCAGATGATCGCCAACAAGCTCGAGTCACC...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAAGGACCTGTGGCAGCGTaGTGTTGTGAGAGGCACGTG +
Preference number: 5 (lower is better)
Translates to: VIGTWKSREKERWVNDGEGPVAA*CCERHV
Trigger: CACGTGCCTCTCACAACACAACGCTGCCACAGGTCC...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp CCTAGCATTGGGGCAGGAGGAAAAAGACACCCAAGTGGGCAGATGGCCAAGTCCTATCAAGTCCTAGCATaGGGGCAGGAGGAAAAAGAC +
Preference number: 5 (lower is better)
Translates to: PSIGAGGKRHPSGQMAKSYQVLA*GQEEKD
Trigger: GTCTTTTTCCTCCTGCCCCAATGCTAGGACTTGATA...GGACTTGGCCATCTGCCCACTTGGGTGTCTTTTTCCTCCTGCCCCAATGCTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS TCA 90 bp ACTGCTTTCCTTAAAATCCGGGTGTCCTCAGCTTGGGCCAAGTACTaGGCCTCAAACAGGGCAATGTCTTCTTCCAGTTGCTGGGCTCGA +
Preference number: 5 (lower is better)
Translates to: TAFLKIRVSSAWAKY*ASNRAMSSSSCWAR
Trigger: TCGAGCCCAGCAACTGGAAGAAGACATTGCCCTGTTTGAGGCTCAGTACTTGGCCCAAGCTGAGGACACCCGGATTTTAAGGAAAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269318.9
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS TCA 90 bp TCTCCTGCTCAATCTTGCTTTCTACTCGTAGTTTCTTCTGCTCCATaGTGTGGAGCTCCTTCTTGGATGCGTCCAGGGAGGCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SPAQSCFLLVVSSAP*CGAPSWMRPGRPAA
Trigger: AGCAGCTGGCCTCCCTGGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGCAAGATTGAGCAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS TCA 90 bp GCTCCAGCTCCTCCGAGCTGCACCGGTTTTTATTCATCAACATGTTaGGCTTCTTCAGGTCGTTGTCCAGGTCCTTCATGTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: APAPPSCTGFYSSTC*ASSGRCPGPSCGAR
Trigger: TCGAGCACCACATGAAGGACCTGGACAACGACCTGAAGAAGCTCAACATGTTGATGAATAAAAACCGGTGCAGCTCGGAGGAGCTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
ENST00000575431.1
CDS TCA 90 bp GCATGGTATTTCGGCAGCTCTTGCCTTGGGACACCGATACTCAGCTaGCAGCTCCATAGGGTCTTTTGGGACTTGCTACTCACCAACAGA +
Preference number: 5 (lower is better)
Translates to: AWYFGSSCLGTPILS*QLHRVFWDLLLTNR
Trigger: TCTGTTGGTGAGTAGCAAGTCCCAAAAGACCCTATGGAGCTGTCAGCTGAGTATCGGTGTCCCAAGGCAAGAGCTGCCGAAATACCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 90 bp TGTGCGTCCAGCCTGCTGCTGGTGTGTGTGATGTCCAGGGTGGTCTaGGCAATGTCACCGTTGATTTTGGAAAGATGTGTCATCATGTTG +
Preference number: 5 (lower is better)
Translates to: CASSLLLVCVMSRVV*AMSPLILERCVIML
Trigger: CAACATGATGACACATCTTTCCAAAATCAACGGTGACATTGCCCAGACCACCCTGGACATCACACACACCAGCAGCAGGCTGGACGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 90 bp AGCCATTTCGTGACATTTCTCAACCCTCCCGCTGTGACTGCGAACTaGGCAGCTGGGCAGGCAGTGGTTCACATTTACAAAATACAGGGA +
Preference number: 5 (lower is better)
Translates to: SHFVTFLNPPAVTAN*AAGQAVVHIYKIQG
Trigger: TCCCTGTATTTTGTAAATGTGAACCACTGCCTGCCCAGCTGCCCAGTTCGCAGTCACAGCGGGAGGGTTGAGAAATGTCACGAAATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS-3UTR CAA 90 bp ACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCAATTGCAGCTTCCGCTaGGGTTGTGACTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TVLKCDNMLSCQGTLKHRNCSFR*GCDFLR
Trigger: CCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATT...GCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp ACAGTCCTGAAGTGTGACAACATGCTGAGCTGTCAGGGGACTTTGAAACACCGCAGCCACAACCAGCTCTaGGAGGTCCAGCTTCAACTT +
Preference number: 5 (lower is better)
Translates to: TVLKCDNMLSCQGTLKHRSHNQL*EVQLQL
Trigger: AAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCT...GCGGTGTTTCAAAGTCCCCTGACAGCTCAGCATGTTGTCACACTTCAGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp TCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGGCTCGCTCGAGGCCATaGCGTGGCGGTCGTGACTCT +
Preference number: 5 (lower is better)
Translates to: SIFFINRIGTVLKCDNMLARSRP*RGGRDS
Trigger: AGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGC...CAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCAGCTGTCAGGGGACTTaGAAACACCGCTGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSSCQGT*KHRCRG
Trigger: CCCCCGGCAGCGGTGTTTCAAAGTCCCCTGACAGCT...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTTCCGCCATTTCCCGTaGCTAGGCGACGCTGTCAAC +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTFRHFP*LGDAVN
Trigger: GTTGACAGCGTCGCCTAGCAACGGGAAATGGCGGAA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp CAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTGTGGGCAATGTCACCGTaGATTTTGGAAAGATGTGTC +
Preference number: 5 (lower is better)
Translates to: QCSPCYVCLGPLTFSCKLWAMSP*ILERCV
Trigger: GACACATCTTTCCAAAATCAACGGTGACATTGCCCA...CAGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp TCAGTGCTCACCCTGTTACGTGTGTCTGGGGCCACTGACTTTCTCCTGCAAGCTTGCTCGTCGATCAGCTaGCTCAGCCTTTTGATTTCA +
Preference number: 5 (lower is better)
Translates to: SVLTLLRVSGATDFLLQACSSIS*LSLLIS
Trigger: TGAAATCAAAAGGCTGAGCAAGCTGATCGACGAGCA...AGCTTGCAGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp AACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCCACTCATCGGTGGCCTaGCGAACGTCCCTGATTTTC +
Preference number: 5 (lower is better)
Translates to: NCKEAPRSLVLGSPGRKSHSSVA*RTSLIF
Trigger: GAAAATCAGGGACGTTCGCAAGGCCACCGATGAGTG...GCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp ACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGGAGGCACGTGCAGATTaGGGAGTGCTGCAAACCAAA +
Preference number: 5 (lower is better)
Translates to: TAKKPQGHWYLEVQGERAEARAD*GVLQTK
Trigger: TTTGGTTTGCAGCACTCCCAAATCTGCACGTGCCTC...CGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS GCA 90 bp AGGTCCTTCATGTGGTGCTCGATCTCCTTCTGCTCCTTCTTCTCCTaGTCAATCTTGCCTATGGCAGAAAACAGAGACTCAGGGAGAGAC +
Preference number: 5 (lower is better)
Translates to: RSFMWCSISFCSFFS*SILPMAENRDSGRD
Trigger: GTCTCTCCCTGAGTCTCTGTTTTCTGCCATAGGCAAGATTGAGCAGGAGAAGAAGGAGCAGAAGGAGATCGAGCACCACATGAAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572253.5
ENST00000575431.1
CDS-3UTR CAA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAAATTGCAGCTTCCGCTaGGGTTGTGACTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLANCSFR*GCDFLR
Trigger: CCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATT...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp CACAACCAGCTCTTGGAGGTCCAGCTTCAACTTTTCGATCTGTCGGTTCAGGTAAGCCACAACCAGCTCTaGGAGGTCCAGCTTCAACTT +
Preference number: 5 (lower is better)
Translates to: HNQLLEVQLQLFDLSVQVSHNQL*EVQLQL
Trigger: AAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCT...TACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS-3UTR CAA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGGCTCGCTCGAGGCCATaGCGTGGCGGTCGTGACTCT +
Preference number: 5 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLARSRP*RGGRDS
Trigger: AGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGC...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTTTTTGCGCTCCTCGTaGGCGGCTGCGCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRFLRSS*AAAQVL
Trigger: CAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGTCGGTGGATTTGGCTaGATGCTGGCATCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTVGGFG*MLASSE
Trigger: CTCAGAGGATGCCAGCATCAAGCCAAATCCACCGAC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp TCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAAAGCTTGCTCAGCCTTTaGATTTCAAGCTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SKSLMTNTIPDLFLEALQSLLSL*ISSSRG
Trigger: GCCCCTGGAGCTTGAAATCAAAAGGCTGAGCAAGCT...TTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTGGGCCTGGACCGCCTaGCCATCGTGCTCGTCGATC +
Preference number: 5 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLWAWTA*PSCSSI
Trigger: GATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCGGTAAAGAAGGTGGTTaGTGGGTTTTCAGATGCACC +
Preference number: 5 (lower is better)
Translates to: LQRSPKVIGTWKSREKERGKEGG*WVFRCT
Trigger: GGTGCATCTGAAAACCCACAAACCACCTTCTTTACC...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS TCA 90 bp CAATGGCACAGCTGCTGTCATGCCTCATGCAGCATGATGGGAAAGTaGCAGCAAAAGCATCCCAACGGTCTGTGGGTCAGAAACATCATT +
Preference number: 5 (lower is better)
Translates to: QWHSCCHASCSMMGK*QQKHPNGLWVRNII
Trigger: AATGATGTTTCTGACCCACAGACCGTTGGGATGCTTTTGCTGTCACTTTCCCATCATGCTGCATGAGGCATGACAGCAGCTGTGCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574799.5
CDS CCA 90 bp ACTTCCTCAGGATGCTCTGTGCTACCGACAGCTTCTTCACCTTTCTaGCCATCATCCTTCTCTGGTGGTGACACCATGTGGCTTTCATTA +
Preference number: 5 (lower is better)
Translates to: TSSGCSVLPTASSPF*PSSFSGGDTMWLSL
Trigger: TAATGAAAGCCACATGGTGTCACCACCAGAGAAGGATGATGGCCAGAAAGGTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000572083.5
ENST00000574099.1
ENST00000576033.5
ENST00000576241.1
CDS CCA 90 bp TGTGTCATCATGTTGGTCTTCTCCTTCTGCAGCCTCAGGATGAGCTaGTTGAAGTATTTGGTGGTCTTGTTGGAGGTCATGTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CVIMLVFSFCSLRMS*LKYLVVLLEVMCSC
Trigger: GCAGGAGCACATGACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAGGCTGCAGAAGGAGAAGACCAACATGATGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS-3UTR CAA 90 bp TTATTTCTCTTAAACGATGCCCTTCTGAGGGTACATGTGGTTTTTAGGAACACAGCTCGCTCGAGGCCATaGCGTGGCGGTCGTGACTCT +
Preference number: 5 (lower is better)
Translates to: LFLLNDALLRVHVVFRNTARSRP*RGGRDS
Trigger: AGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGC...TGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAAGAGAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGGCCTTCTTTACCACTaGTGTCATCACGCGGATGTC +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTGLLYH*CHHADV
Trigger: GACATCCGCGTGATGACACAAGTGGTAAAGAAGGCC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCCGGGTGTCCTCAGCTaGGGCCAAGTACTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLPGVLS*GQVLSL
Trigger: GAGGCTCAGTACTTGGCCCAAGCTGAGGACACCCGG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCATCTCGCTCTGGCTGTaGGTGATGAGCTCGTTGACT +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTISLWL*VMSSLT
Trigger: AGTCAACGAGCTCATCACCAACAGCCAGAGCGAGAT...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCATCCGCTCCAGCTGCTaGTTGAGGAAGTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTIRSSC*LRKLMS
Trigger: GCTCATCAACTTCCTCAACAAGCAGCTGGAGCGGAT...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCAGCTTGCTCAGCCTTTaGATTTCAAGCTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTSLLSL*ISSSRG
Trigger: GCCCCTGGAGCTTGAAATCAAAAGGCTGAGCAAGCT...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTTCTCTGTCACCCGGTaGTTCTGCTCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRFSVTR*FCSSSS
Trigger: GGAGGAGCTGGAGCAGAACAACCGGGTGACAGAGAA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCTGAGCTGGTTCAGCTaGTCCTGCATCTTGATGGTC +
Preference number: 5 (lower is better)
Translates to: KLQRSPKVIGTWKSREKELSWFS*SCILMV
Trigger: GACCATCAAGATGCAGGACAAGCTGAACCAGCTCAG...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGAGAGCCGCCAACTTTTaGCGCTCCTCGTTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLRAANF*RSSLAA
Trigger: AGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCT...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCTATTTGGTGGTCTTGTaGGAGGTCATGTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTYLVVL*EVMCSC
Trigger: GCAGGAGCACATGACCTCCAACAAGACCACCAAATA...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCAAAGTATTTGGTGGTCTaGTTGGAGGTCATGTGCTCC +
Preference number: 5 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLAKYLVV*LEVMCS
Trigger: GGAGCACATGACCTCCAACAAGACCACCAAATACTT...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp TTCCAAGTCCCTCATGACAAACACAATTCCGGATCTCTTCCTGGAGGCCTTGCACTCAGGATGAGCTGGTaGAAGTATTTGGTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: FQVPHDKHNSGSLPGGLALRMSW*KYLVVL
Trigger: CAAGACCACCAAATACTTCAACCAGCTCATCCTGAG...TGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGTTTGTCATGAGGGACTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCGAAGTTGATGAGCCCTaGCTTCCTCTCGATCAGGAT +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTEVDEP*LPLDQD
Trigger: ATCCTGATCGAGAGGAAGCAAGGGCTCATCAACTTC...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAATGCTTGTTGAGGAAGTaGATGAGCCCTTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: VIGTWKSREKERWVNDGECLLRK*MSPCFL
Trigger: GAGGAAGCAAGGGCTCATCAACTTCCTCAACAAGCA...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS CCA 90 bp AACATGAGCCCAGCCCATAACAGATACTCCATCAACATTTGTCAGTaGAACAAATCACAAAGCCACAAACATGTGAGCAGCCGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: NMSPAHNRYSINICQ*NKSQSHKHVSSRWC
Trigger: GCACCACCGGCTGCTCACATGTTTGTGGCTTTGTGATTTGTTCCACTGACAAATGTTGATGGAGTATCTGTTATGGGCTGGGCTCATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS-3UTR CAA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAATTGCAGCTTCCGCTaGGGTTGTGACTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRNCSFR*GCDFLR
Trigger: CCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAGCCACAACCAGCTCTaGGAGGTCCAGCTTCAACTT +
Preference number: 5 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSHNQL*EVQLQL
Trigger: AAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGAGCAATGTCTTCTTCCAGTaGCTGGGCTCGAGTGGTGAG +
Preference number: 5 (lower is better)
Translates to: IFFINRIGTVLKCDNMLSNVFFQ*LGSSGE
Trigger: CTCACCACTCGAGCCCAGCAACTGGAAGAAGACATT...GCTCAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGCTCCGTGAGTATCATTaGTTCCAGCTGGTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRLREYH*FQLVLA
Trigger: AGCCAGGACCAGCTGGAACAAATGATACTCACGGAG...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp GACTGTCTCACAGTGGGATACGTTAGAGGGTCACAAAGTTTGAGGGTTACAACCAAGTATTTGGTGGTCTaGTTGGAGGTCATGTGCTCC +
Preference number: 5 (lower is better)
Translates to: DCLTVGYVRGSQSLRVTTKYLVV*LEVMCS
Trigger: GGAGCACATGACCTCCAACAAGACCACCAAATACTT...GGTTGTAACCCTCAAACTTTGTGACCCTCTAACGTATCCCACTGTGAGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp AAACTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGAGCTGGTTGAAGTATTaGGTGGTCTTGTTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: KLQRSPKVIGTWKSREKESWLKY*VVLLEV
Trigger: GACCTCCAACAAGACCACCAAATACTTCAACCAGCT...CTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAGCTTCTTCAGGTCGTaGTCCAGGTCCTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSFFRS*SRSFMW
Trigger: CCACATGAAGGACCTGGACAACGACCTGAAGAAGCT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp CTGCAAAGAAGCCCCAAGGTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTTATTCATCAACATGTaGAGCTTCTTCAGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: LQRSPKVIGTWKSREKERLFINM*SFFRSL
Trigger: CAACGACCTGAAGAAGCTCAACATGTTGATGAATAA...GCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGACCTTGGGGCTTCTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGCGCTCCAGCTGCTTGTaGAGGAAGTTGATGAGCCCT +
Preference number: 5 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLRSSCL*RKLMSP
Trigger: AGGGCTCATCAACTTCCTCAACAAGCAGCTGGAGCG...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS TCA 90 bp TTGCAATTTGTATTTATAATGTATTCCCAAGTTCCTCACATAGGGTaGCAAACCCCGTGGGCCGTGCGACACTGGCACAAAACAGAAGTC +
Preference number: 5 (lower is better)
Translates to: LQFVFIMYSQVPHIG*QTPWAVRHWHKTEV
Trigger: GACTTCTGTTTTGTGCCAGTGTCGCACGGCCCACGGGGTTTGTCACCCTATGTGAGGAACTTGGGAATACATTATAAATACAAATTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572083.5
CDS-3UTR CAA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATGGGCTCGGCTCTGCTaGGTAGCCACAACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LITSLLKAMKSNCDHGETWARLC*VATTSS
Trigger: AGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAGCTGGTTGAAGTATTaGGTGGTCTTGTTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRSWLKY*VVLLEV
Trigger: GACCTCCAACAAGACCACCAAATACTTCAACCAGCT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGTGCTCGTCGATCAGCTaGCTCAGCCTTTTGATTTCA +
Preference number: 5 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRCSSIS*LSLLIS
Trigger: TGAAATCAAAAGGCTGAGCAAGCTGATCGACGAGCA...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTTCTGCTTCCACCAGTaGATTCAGGAGGGTCGCCTT +
Preference number: 5 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLFCFHQ*IQEGRL
Trigger: AAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGAGAGGGTCACAAAGTTaGAGGGTTACAACCGGCATT +
Preference number: 5 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRRGSQS*RVTTGI
Trigger: AATGCCGGTTGTAACCCTCAAACTTTGTGACCCTCT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp GTCATTGGTACTTGGAAGTCCAGGGAGAAAGAGCGCTGGGTTAATGATGGAGAAATGTCACCGTTGATTTaGGAAAGATGTGTCATCATG +
Preference number: 5 (lower is better)
Translates to: VIGTWKSREKERWVNDGEMSPLI*ERCVIM
Trigger: CATGATGACACATCTTTCCAAAATCAACGGTGACAT...TTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTCCAAGTACCAATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397545.9
CDS-3UTR CAA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTGCTTGTTGAGGAAGTaGATGAGCCCTTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLCLLRK*MSPCFL
Trigger: GAGGAAGCAAGGGCTCATCAACTTCCTCAACAAGCA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAAATGTCTTCTTCCAGTaGCTGGGCTCGAGTGGTGAG +
Preference number: 5 (lower is better)
Translates to: LITSLLKAMKSNCDHGETNVFFQ*LGSSGE
Trigger: CTCACCACTCGAGCCCAGCAACTGGAAGAAGACATT...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp TCTATTTTCTTCATCAATCGGATTGGCACAGTCCTGAAGTGTGACAACATGCTGTGTTTATATTTTGACTaGGGAAGCGCTCTAGGGACA +
Preference number: 5 (lower is better)
Translates to: SIFFINRIGTVLKCDNMLCLYFD*GSALGT
Trigger: TGTCCCTAGAGCGCTTCCCAAGTCAAAATATAAACA...CAGCATGTTGTCACACTTCAGGACTGTGCCAATCCGATTGATGAAGAAAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS-3UTR CAA 90 bp ACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAACGCGGATGTCACCGTTGATTTaGGAAAGATGTGTCATCATG +
Preference number: 5 (lower is better)
Translates to: TSLLKAMKSNCDHGETTRMSPLI*ERCVIM
Trigger: CATGATGACACATCTTTCCAAAATCAACGGTGACAT...CCGCGTTGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACAAGCTTGTCCTGCATCTaGATGGTCTCCCTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LITSLLKAMKSNCDHGETSLSCI*MVSLSE
Trigger: CTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCT...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACTGAGCTGGTTCAGCTaGTCCTGCATCTTGATGGTC +
Preference number: 5 (lower is better)
Translates to: LITSLLKAMKSNCDHGETLSWFS*SCILMV
Trigger: GACCATCAAGATGCAGGACAAGCTGAACCAGCTCAG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTGTGTGCGTCCTGTGTaGTTCTGCAATATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLCVRPV*FCNISS
Trigger: TGAAGAAATATTGCAGAACAACACAGGACGCACACA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACACTCAGGATGAGCTGGTaGAAGTATTTGGTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: LITSLLKAMKSNCDHGETLRMSW*KYLVVL
Trigger: CAAGACCACCAAATACTTCAACCAGCTCATCCTGAG...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp ATTACATGGAGTAGGAATAAAACAGCGTTTTGTGAGATGACATGCACGTGCTTGTTATTCATCAACATGTaGAGCTTCTTCAGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: ITWSRNKTAFCEMTCTCLLFINM*SFFRSL
Trigger: CAACGACCTGAAGAAGCTCAACATGTTGATGAATAA...CAAGCACGTGCATGTCATCTCACAAAACGCTGTTTTATTCCTACTCCATGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS-3UTR CAA 90 bp TTAATTACCAGCCTTTTAAAGGCAATGAAATCTAATTGTGACCATGGAGAGACATGGGCAATGTCACCGTaGATTTTGGAAAGATGTGTC +
Preference number: 5 (lower is better)
Translates to: LITSLLKAMKSNCDHGETWAMSP*ILERCV
Trigger: GACACATCTTTCCAAAATCAACGGTGACATTGCCCA...TGTCTCTCCATGGTCACAATTAGATTTCATTGCCTTTAAAAGGCTGGTAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374877.7
CDS GCA 72 bp GAACGGAGAGCGCGGCCTGGCGACTCCAAGACCCGCTaGCCCTCGGCCCGGCTTACCGGCCCGCCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: ERRARPGDSKTR*PSARLTGPPRR
Trigger: GCGGCGCGGCGGGCCGGTAAGCCGGGCCGAGGGGCAGCGGGTCTTGGAGTCGCCAGGCCGCGCTCTCCGTTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572270.1
ENST00000574099.1
CDS GCA 72 bp GAGGCCCCCGCCCTCCATCGTCCTGAGCCCCGGGACTaGGTGGACACGGCCGGACCTTCAGCGAGCGCACGA +
Preference number: 6 (lower is better)
Translates to: EAPALHRPEPRD*VDTAGPSASAR
Trigger: TCGTGCGCTCGCTGAAGGTCCGGCCGTGTCCACGCAGTCCCGGGGCTCAGGACGATGGAGGGCGGGGGCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS GCA 72 bp CGTACCCCCGCCCTCCATCGTCCTGAGCCCCGGGACTaGGTGGACACGGCCGGACCTTCAGCGAGCGCACGA +
Preference number: 6 (lower is better)
Translates to: RTPALHRPEPRD*VDTAGPSASAR
Trigger: TCGTGCGCTCGCTGAAGGTCCGGCCGTGTCCACGCAGTCCCGGGGCTCAGGACGATGGAGGGCGGGGGTACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 72 bp CCCCCGCCCTCCATCGTCCTGAGCCCCGGGACTGCGTaGACACGGCCGGACCTTCAGCGAGCGCACGAACTC +
Preference number: 6 (lower is better)
Translates to: PPPSIVLSPGTA*TRPDLQRAHEL
Trigger: GAGTTCGTGCGCTCGCTGAAGGTCCGGCCGTGTCCACGCAGTCCCGGGGCTCAGGACGATGGAGGGCGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572253.5
ENST00000574933.1
CDS CCA 72 bp CCTGAAGAGGCACCACCGTGCGCCAGGTGTGACCTGTaGGGCGGGCCCGGCCTCACCAGCTGGTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: PEEAPPCARCDL*GGPGLTSWSWL
Trigger: CAGCCAGGACCAGCTGGTGAGGCCGGGCCCGCCCCACAGGTCACACCTGGCGCACGGTGGTGCCTCTTCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp GACTCGATGTCGCTCCCGTGGCTCAGCCGGAAGCGGTaGTGGACGCCCATTGGGAGCACCTGCCCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: DSMSLPWLSRKR*WTPIGSTCPWG
Trigger: GCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS GCA 72 bp AGCGCCTCCAGCACCGCCCTGTGCGCCTCGTCGCGGTaGTTCATGCCCACCAGGCTGCTGGCCCATTGCTGC +
Preference number: 6 (lower is better)
Translates to: SASSTALCASSR*FMPTRLLAHCC
Trigger: GCAGCAATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGAGGCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374877.7
ENST00000397545.9
ENST00000571028.1
ENST00000574799.5
CDS GCA 72 bp TGGGGAGGGCCATGGGATTGTGGATGCCGGGGCTGGTaGCCTCTATCCCGGCACCGAGGGCAGGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: WGGPWDCGCRGW*PLSRHRGQGCR
Trigger: CCTGCAGCCCTGCCCTCGGTGCCGGGATAGAGGGCACCAGCCCCGGCATCCACAATCCCATGGCCCTCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 72 bp CCCGTGGCTCAGCCGGAAGCGGTGCTGGACGCCCATTaGGAGCACCTGCCCCTGGGGCTCCTCTGTGGATCC +
Preference number: 6 (lower is better)
Translates to: PVAQPEAVLDAH*EHLPLGLLCGS
Trigger: GGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS CCA 72 bp TCGATGTCGCTCCCGTGGCTCAGCCGGAAGCGGTGCTaGACGCCCATTGGGAGCACCTGCCCCTGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SMSLPWLSRKRC*TPIGSTCPWGS
Trigger: GGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS CCA 72 bp GACCTGTGGGGCGGGCCCGGCCTCACCAGCTGGTCCTaGCTGAGGGCATCCTCTGTGTCCTGCAGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: DLWGGPGLTSWS*LRASSVSCRVS
Trigger: GCTCACCCTGCAGGACACAGAGGATGCCCTCAGCCAGGACCAGCTGGTGAGGCCGGGCCCGCCCCACAGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 72 bp CTGTGGGGAGGGCCATGGGATTGTGGATGCCGGGGCTaGTGCCCTCTATCCCGGCACCGAGGGCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LWGGPWDCGCRG*CPLSRHRGQGC
Trigger: GCAGCCCTGCCCTCGGTGCCGGGATAGAGGGCACCAGCCCCGGCATCCACAATCCCATGGCCCTCCCCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp TCTAGGGACACGCTGAGCGCCTCCAGCACCGCCCTGTaGGCCTCGTCGCGGTGCTTCATGCCCACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: SRDTLSASSTAL*ASSRCFMPTRL
Trigger: CAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGAGGCGCTCAGCGTGTCCCTAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS GCA 72 bp TCGGTGCGGGTGAGCGCCTTCCTGTCCATCTTGCGCTaGCCCTCGGCCTGGGTGGTGACGGTCTCTCTGCGG +
Preference number: 6 (lower is better)
Translates to: SVRVSAFLSILR*PSAWVVTVSLR
Trigger: CCGCAGAGAGACCGTCACCACCCAGGCCGAGGGGCAGCGCAAGATGGACAGGAAGGCGCTCACCCGCACCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS GCA 72 bp CTCGACCTGCATCTGAGCGCCTCCAGCACCGCCCTGTaGGCCTCGTCGCGGTGCTTCATGCCCACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LDLHLSASSTAL*ASSRCFMPTRL
Trigger: CAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGAGGCGCTCAGATGCAGGTCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS CCA 72 bp AGGTGTGACCTGTGGGGCGGGCCCGGCCTCACCAGCTaGTCCTGGCTGAGGGCATCCTCTGTGTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RCDLWGGPGLTS*SWLRASSVSCR
Trigger: CCTGCAGGACACAGAGGATGCCCTCAGCCAGGACCAGCTGGTGAGGCCGGGCCCGCCCCACAGGTCACACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 90 bp TCGTCCCGCACGCGGTCCAGGATGGTGGCGATGAGAGCCAGTCGCTaGTCCAGGCGCTGGCGCTCCAGCACTAGGGACTGCTTGGAGCGG +
Preference number: 6 (lower is better)
Translates to: SSRTRSRMVAMRASR*SRRWRSSTRDCLER
Trigger: CCGCTCCAAGCAGTCCCTAGTGCTGGAGCGCCAGCGCCTGGACAAGCGACTGGCTCTCATCGCCACCATCCTGGACCGCGTGCGGGACGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS TCA 72 bp GGTACTCGTCCCGCACGCGGTCCAGGATGGTGGCGATaGGAGCCAGTCGCTTGTCCAGGCGCTGGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: GTRPARGPGWWR*EPVACPGAGAP
Trigger: TGGAGCGCCAGCGCCTGGACAAGCGACTGGCTCTCATCGCCACCATCCTGGACCGCGTGCGGGACGAGTACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp GCCCCCTCCTCGGTGCTGGGCTGCTGGATCTGGTCCTaGAACACTGGCAGGTCTCCTTCCCTGGGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: APSSVLGCWIWS*NTGRSPSLGWA
Trigger: TGCCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS CCA 72 bp GCCATGGCCCCCTCCTCGGTGCTGGGCTGCTGGATCTaGTCCTGGAACACTGGCAGGTCTCCTTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: AMAPSSVLGCWI*SWNTGRSPSLG
Trigger: CCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS CCA 72 bp CAGGGAGAGGAGCCCTTGCCCGGCCACAGCTGGCTCTaGTTCCTCGACCTGCATCTGAGCGCCTCCAGCACC +
Preference number: 6 (lower is better)
Translates to: QGEEPLPGHSWL*FLDLHLSASST
Trigger: GGTGCTGGAGGCGCTCAGATGCAGGTCGAGGAACCAGAGCCAGCTGTGGCCGGGCAAGGGCTCCTCTCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS CCA 72 bp CGGGCAGGACCCGGGATGTCTCGGCAGGTGGACATGTaGGTGGAGAGTGGTCCAGGAAGGATGCCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: RAGPGMSRQVDM*VESGPGRMPAS
Trigger: GGAGGCGGGCATCCTTCCTGGACCACTCTCCACCCACATGTCCACCTGCCGAGACATCCCGGGTCCTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 72 bp GGTGGCTCATCGCCAGGGCAGGGTGACCTCAGCAGGTaGGTGGCACCTGGCTCCTGCGAGACGAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: GGSSPGQGDLSR*VAPGSCETNSS
Trigger: GGAGGAGTTCGTCTCGCAGGAGCCAGGTGCCACCCACCTGCTGAGGTCACCCTGCCCTGGCGATGAGCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576241.1
CDS CAA 90 bp CGATGTCGCTCCCGTGGCTCAGCCGGAAGCGGTGCTGGACGCCCATaGGGAGCACCTGCCCCTGGGGCTCCTCTGTGGATCCTGTCAATC +
Preference number: 6 (lower is better)
Translates to: RCRSRGSAGSGAGRP*GAPAPGAPLWILSI
Trigger: GATTGACAGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS TCA 72 bp TCCTGTCCATCTTGCGCTGCCCCTCGGCCTGGGTGGTaGCGGTCTCTCTGCGGGCAACCGCCAACTCCATGG +
Preference number: 6 (lower is better)
Translates to: SCPSCAAPRPGW*RSLCGQPPTPW
Trigger: CCATGGAGTTGGCGGTTGCCCGCAGAGAGACCGTCACCACCCAGGCCGAGGGGCAGCGCAAGATGGACAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS GCA 72 bp CAGAGCCGCCAACTTTTTGCGCTCCTCGTTGGCGGCTaGGCAGGTCTTGGTGTAGAGAGCGCGGGCGGCCTG +
Preference number: 6 (lower is better)
Translates to: QSRQLFALLVGG*AGLGVESAGGL
Trigger: CAGGCCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp GTGACACAGGGAGAGGAGCCCTTGCCCGGCCACAGCTaGCTCTGGTTCCTCGACCTGCATCTGAGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: VTQGEEPLPGHS*LWFLDLHLSAS
Trigger: GGAGGCGCTCAGATGCAGGTCGAGGAACCAGAGCCAGCTGTGGCCGGGCAAGGGCTCCTCTCCCTGTGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS CCA 72 bp GCTCATCGCCAGGGCAGGGTGACCTCAGCAGGTGGGTaGCACCTGGCTCCTGCGAGACGAACTCCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: AHRQGRVTSAGG*HLAPARRTPPG
Trigger: ACCTGGAGGAGTTCGTCTCGCAGGAGCCAGGTGCCACCCACCTGCTGAGGTCACCCTGCCCTGGCGATGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576241.1
CDS CAA 72 bp ACGCGGTCCAGGATGGTGGCGATGAGAGCCAGTCGCTaGTCCAGGCGCTGGCGCTCCAGCACTAGGGACTGC +
Preference number: 6 (lower is better)
Translates to: TRSRMVAMRASR*SRRWRSSTRDC
Trigger: GCAGTCCCTAGTGCTGGAGCGCCAGCGCCTGGACAAGCGACTGGCTCTCATCGCCACCATCCTGGACCGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CAA 90 bp GAGGGCCCTGGTGACTCGAGCTTGTTGGCGATCATCTGGCTGACCTaGTGCAGGGCCTCCTGGAACTGGGGGTACTCGTCCCGCACGCGG +
Preference number: 6 (lower is better)
Translates to: EGPGDSSLLAIIWLT*CRASWNWGYSSRTR
Trigger: CCGCGTGCGGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCAACAAGCTCGAGTCACCAGGGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS TCA 72 bp GGCACCTGGCTCCTGCGAGACGAACTCCTCCAGGTCTaGGGACTCGATGTCGCTCCCGTGGCTCAGCCGGAA +
Preference number: 6 (lower is better)
Translates to: GTWLLRDELLQV*GLDVAPVAQPE
Trigger: TTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTCGTCTCGCAGGAGCCAGGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576241.1
CDS GCA 72 bp AGCCGGAAGCGGTGCTGGACGCCCATTGGGAGCACCTaGCCCTGGGGCTCCTCTGTGGATCCTGTCAATCTG +
Preference number: 6 (lower is better)
Translates to: SRKRCWTPIGST*PWGSSVDPVNL
Trigger: CAGATTGACAGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS GCA 72 bp TGCTTCCTCGTCACTCCCCTCGGACTCCACTCTCTCTaGCATGGCCCCCTCCTCGGTGCTGGGCTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: CFLVTPLGLHSL*HGPLLGAGLLD
Trigger: ATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCCGAGGGGAGTGACGAGGAAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS GCA 72 bp GCAGGCGCAGCCAGGTCACCTGGGCCTGGACCGCCTTaGCATCGTGCTCGTCGATCAGCTTGCTCAGCCTTT +
Preference number: 6 (lower is better)
Translates to: AGAARSPGPGPP*HRARRSACSAF
Trigger: AAAGGCTGAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCTGCGCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS GCA 72 bp TGCTCCTCCTGCTCCTGTGTCACCTTGACCATCTCCTaGTGCAGGCGCAGCCAGGTCACCTGGGCCTGGACC +
Preference number: 6 (lower is better)
Translates to: CSSCSCVTLTIS*CRRSQVTWAWT
Trigger: GGTCCAGGCCCAGGTGACCTGGCTGCGCCTGCAGCAGGAGATGGTCAAGGTGACACAGGAGCAGGAGGAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 72 bp AACTCCTCCAGGTCTGAGGACTCGATGTCGCTCCCGTaGCTCAGCCGGAAGCGGTGCTGGACGCCCATTGGG +
Preference number: 6 (lower is better)
Translates to: NSSRSEDSMSLP*LSRKRCWTPIG
Trigger: CCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000576241.1
CDS CCA 72 bp ACTTTTTGCGCTCCTCGTTGGCGGCTGCGCAGGTCTTaGTGTAGAGAGCGCGGGCGGCCTGCAGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: TFCAPRWRLRRS*CRERGRPAAPP
Trigger: AGGAGGAGCTGCAGGCCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp ATCTCCTGCTGCAGGCGCAGCCAGGTCACCTGGGCCTaGACCGCCTTGCCATCGTGCTCGTCGATCAGCTTG +
Preference number: 6 (lower is better)
Translates to: ISCCRRSQVTWA*TALPSCSSISL
Trigger: CAAGCTGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCTGCGCCTGCAGCAGGAGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 72 bp TTGGCGATCATCTGGCTGACCTTGTGCAGGGCCTCCTaGAACTGGGGGTACTCGTCCCGCACGCGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LAIIWLTLCRAS*NWGYSSRTRSR
Trigger: CCTGGACCGCGTGCGGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp ATGCCCGCCTCCATCATTCCAGGCACCCTGGTGCTTTaGCAGCCCCTTGGGCCTCAGAAGGGTTGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: MPASIIPGTLVL*QPLGPQKGWGA
Trigger: GGCTCCCCAACCCTTCTGAGGCCCAAGGGGCTGCCAAAGCACCAGGGTGCCTGGAATGATGGAGGCGGGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp TGCAGGCGCAGCCAGGTCACCTGGGCCTGGACCGCCTaGCCATCGTGCTCGTCGATCAGCTTGCTCAGCCTT +
Preference number: 6 (lower is better)
Translates to: CRRSQVTWAWTA*PSCSSISLLSL
Trigger: AAGGCTGAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCTGCGCCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 72 bp GTTCAGGCAACCCTGGTGACACAGGGAGAGGAGCCCTaGCCCGGCCACAGCTGGCTCTGGTTCCTCGACCTG +
Preference number: 6 (lower is better)
Translates to: VQATLVTQGEEP*PGHSWLWFLDL
Trigger: CAGGTCGAGGAACCAGAGCCAGCTGTGGCCGGGCAAGGGCTCCTCTCCCTGTGTCACCAGGGTTGCCTGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS CAA 72 bp TCCCCAGGGACCTCCTGGGACACGTTTACCTGTCGTTaGAGGGCCCCAAGCCGGGTGAGGTCGGCCTCGAGT +
Preference number: 6 (lower is better)
Translates to: SPGTSWDTFTCR*RAPSRVRSASS
Trigger: ACTCGAGGCCGACCTCACCCGGCTTGGGGCCCTCAAACGACAGGTAAACGTGTCCCAGGAGGTCCCTGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 90 bp CGGCCTGCAGCTCCTCCTCCTTCTGCCTGCGCTCGCTCGAGGCCATaGCGTGGCGGTCGTGACTCTTCTCCAGCAGCTTCTGCAGGTGTA +
Preference number: 6 (lower is better)
Translates to: RPAAPPPSACARSRP*RGGRDSSPAASAGV
Trigger: TACACCTGCAGAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCTGCAGGCCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS CAA 90 bp GTGCGCCTCGTCGCGGTGCTTCATGCCCACCAGGCTGCTGGCCCATaGCTGCATGATGCGCCTCTTCTCCACGCTGATGGCGTCGATCTC +
Preference number: 6 (lower is better)
Translates to: VRLVAVLHAHQAAGP*LHDAPLLHADGVDL
Trigger: GAGATCGACGCCATCAGCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374877.7
ENST00000397545.9
ENST00000571028.1
ENST00000574799.5
CDS CAA 90 bp CGTCCTGGTGTTCAGGCAACCCTGGTGACACAGGGAGAGGAGCCCTaGCCCGGCCACAGCTGGCTCTGGTTCCTCGACCTGCATCTGAGC +
Preference number: 6 (lower is better)
Translates to: RPGVQATLVTQGEEP*PGHSWLWFLDLHLS
Trigger: GCTCAGATGCAGGTCGAGGAACCAGAGCCAGCTGTGGCCGGGCAAGGGCTCCTCTCCCTGTGTCACCAGGGTTGCCTGAACACCAGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS CAA 90 bp TGGCCGTCATCCCCAGGGACCTCCTGGGACACGTTTACCTGTCGTTaGAGGGCCCCAAGCCGGGTGAGGTCGGCCTCGAGTGTGTCGAAG +
Preference number: 6 (lower is better)
Translates to: WPSSPGTSWDTFTCR*RAPSRVRSASSVSK
Trigger: CTTCGACACACTCGAGGCCGACCTCACCCGGCTTGGGGCCCTCAAACGACAGGTAAACGTGTCCCAGGAGGTCCCTGGGGATGACGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp ACTCTCTCTGCCATGGCCCCCTCCTCGGTGCTGGGCTaGTGGATCTGGTCCTGGAACACTGGCAGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: TLSAMAPSSVLG*WIWSWNTGRSP
Trigger: AGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS GCA 72 bp TCGCGGTGCTTCATGCCCACCAGGCTGCTGGCCCATTaGTGCATGATGCGCCTCTTCTCCACGCTGATGGCG +
Preference number: 6 (lower is better)
Translates to: SRCFMPTRLLAH*CMMRLFSTLMA
Trigger: CGCCATCAGCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374877.7
ENST00000397545.9
ENST00000571028.1
ENST00000574799.5
CDS GCA 72 bp GACTCGATGTCGCTCCCGTGGCTCAGCCGGAAGCGGTaGTGGACGCCCATTGGGAGCACTGATTTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: DSMSLPWLSRKR*WTPIGSTDLPF
Trigger: GAAGGGCAAATCAGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573474.5
CDS GCA 72 bp GAGGTGCCCACGTCCCAGAGCTCGTCTCAGCATCACTaGAGGGCCGGGCACGGCGGCTCTTACTTTCTACTC +
Preference number: 6 (lower is better)
Translates to: EVPTSQSSSQHH*RAGHGGSYFLL
Trigger: GAGTAGAAAGTAAGAGCCGCCGTGCCCGGCCCTGCAGTGATGCTGAGACGAGCTCTGGGACGTGGGCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp GAAGGATGCCCGCCTCCATCATTCCAGGCACCCTGGTaGTTTGGCAGCCCCTTGGGCCTCAGAAGGGTTGGG +
Preference number: 6 (lower is better)
Translates to: EGCPPPSFQAPW*FGSPLGLRRVG
Trigger: CCCAACCCTTCTGAGGCCCAAGGGGCTGCCAAAGCACCAGGGTGCCTGGAATGATGGAGGCGGGCATCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp GCGTGTGGGAGGGCCAGGCTCCCTCCCCCAGACACTTaGAAATCTGTGGAGCACCGGGACCTGGTTGATGCT +
Preference number: 6 (lower is better)
Translates to: ACGRARLPPPDT*KSVEHRDLVDA
Trigger: AGCATCAACCAGGTCCCGGTGCTCCACAGATTTGCAAGTGTCTGGGGGAGGGAGCCTGGCCCTCCCACACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp CAGGGTGACCTCAGCAGGTGGGTGGCACCTGGCTCCTaGGAGACGAACTCCTCCAGGTCTGAGGACTCGATG +
Preference number: 6 (lower is better)
Translates to: QGDLSRWVAPGS*ETNSSRSEDSM
Trigger: CATCGAGTCCTCAGACCTGGAGGAGTTCGTCTCGCAGGAGCCAGGTGCCACCCACCTGCTGAGGTCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576241.1
CDS CCA 72 bp AAGCGGTGCTGGACGCCCATTGGGAGCACCTGCCCCTaGGGCTCCTCTGTGGATCCTGTCAATCTGCCCACT +
Preference number: 6 (lower is better)
Translates to: KRCWTPIGSTCP*GSSVDPVNLPT
Trigger: AGTGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000576241.1
CDS CCA 72 bp ACTCCACTCTCTCTGCCATGGCCCCCTCCTCGGTGCTaGGCTGCTGGATCTGGTCCTGGAACACTGGCAGGT +
Preference number: 6 (lower is better)
Translates to: TPLSLPWPPPRC*AAGSGPGTLAG
Trigger: ACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS CCA 72 bp CAGTCTGCAGAGCCGCCAACTTTTTGCGCTCCTCGTTaGCGGCTGCGCAGGTCTTGGTGTAGAGAGCGCGGG +
Preference number: 6 (lower is better)
Translates to: QSAEPPTFCAPR*RLRRSWCRERG
Trigger: CCCGCGCTCTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCTGCAGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp TGTCCAGGCGCTGGCGCTCCAGCACTAGGGACTGCTTaGAGCGGAACAGGAACACGTAGCGCCCCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: CPGAGAPALGTA*SGTGTRSAPPS
Trigger: TGAAGGAGGGGCGCTACGTGTTCCTGTTCCGCTCCAAGCAGTCCCTAGTGCTGGAGCGCCAGCGCCTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp ATGGTGGCGATGAGAGCCAGTCGCTTGTCCAGGCGCTaGCGCTCCAGCACTAGGGACTGCTTGGAGCGGAAC +
Preference number: 6 (lower is better)
Translates to: MVAMRASRLSRR*RSSTRDCLERN
Trigger: GTTCCGCTCCAAGCAGTCCCTAGTGCTGGAGCGCCAGCGCCTGGACAAGCGACTGGCTCTCATCGCCACCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp ATCATCTGGCTGACCTTGTGCAGGGCCTCCTGGAACTaGGGGTACTCGTCCCGCACGCGGTCCAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: IIWLTLCRASWN*GYSSRTRSRMV
Trigger: CACCATCCTGGACCGCGTGCGGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp GAGGGCCCTGGTGACTCGAGCTTGTTGGCGATCATCTaGCTGACCTTGTGCAGGGCCTCCTGGAACTGGGGG +
Preference number: 6 (lower is better)
Translates to: EGPGDSSLLAII*LTLCRASWNWG
Trigger: CCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCAACAAGCTCGAGTCACCAGGGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp CTCACCAATCTGCCCACTGCTGGCCCAGAGGTGACCTaGCCCATTTGCTCCGACGGGCCTAAGACTCCGTGG +
Preference number: 6 (lower is better)
Translates to: LTNLPTAGPEVT*PICSDGPKTPW
Trigger: CCACGGAGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572083.5
CDS CAA 72 bp GTCGCGGTGCTTCATGCCCACCAGGCTGCTGGCCCATaGCTGCATGATGCGCCTCTTCTCCACGCTGATGGC +
Preference number: 6 (lower is better)
Translates to: VAVLHAHQAAGP*LHDAPLLHADG
Trigger: GCCATCAGCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374877.7
ENST00000397545.9
ENST00000571028.1
ENST00000574799.5
CDS CAA 90 bp AGGGTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTGCATCTaGATGGTCTCCCTCTCAGAGGCCTGCATGGGGGAGGGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: RVAFSSLSWFSLSCI*MVSLSEACMGEGAG
Trigger: TCCCGCCCCCTCCCCCATGCAGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 90 bp AGGGTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTGCATCTaGATGGTCTCCCTCTCAGAGGCCCCCGCCCTCCATCGTCCTGAG +
Preference number: 6 (lower is better)
Translates to: RVAFSSLSWFSLSCI*MVSLSEAPALHRPE
Trigger: CTCAGGACGATGGAGGGCGGGGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS CAA 90 bp GGGTCCTCGCCCGCAGGCAGCAGTGTCCGAGAGGTGAGCCAGGTTTaGTCTCTCCCTGTAGCTCCCTTCATCCCCTCCCTCTTGTCGTTC +
Preference number: 6 (lower is better)
Translates to: GSSPAGSSVREVSQV*SLPVAPFIPSLLSF
Trigger: GAACGACAAGAGGGAGGGGATGAAGGGAGCTACAGGGAGAGACAAAACCTGGCTCACCTCTCGGACACTGCTGCCTGCGGGCGAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS TCA 72 bp GATCACTGGCTCCTGCGAGACGAACTCCTCCAGGTCTaGGGACTCGATGTCGCTCCCGTGGCTCAGCCGGAA +
Preference number: 6 (lower is better)
Translates to: DHWLLRDELLQV*GLDVAPVAQPE
Trigger: TTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTCGTCTCGCAGGAGCCAGTGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
CDS GCA 72 bp GACTCGAGCTTGTTGGCGATCATCTGGCTGACCTTGTaGAGGGCCTCCTGGAACTGGGGGTACTCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: DSSLLAIIWLTL*RASWNWGYSSR
Trigger: GCGGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCAACAAGCTCGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397545.9
ENST00000574799.5
CDS GCA 72 bp GTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTaGATCTTGATGGTCTCCCTCTCAGAGGCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: VAFSSLSWFSLS*ILMVSLSEAPA
Trigger: GGCGGGGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS CCA 72 bp CGGGATGTCTCGGCAGGTGGACATGTGGGTGGAGAGTaGTCCAGGAAGGATGCCCGCCTCCATCATTCCAGG +
Preference number: 6 (lower is better)
Translates to: RDVSAGGHVGGE*SRKDARLHHSR
Trigger: CCTGGAATGATGGAGGCGGGCATCCTTCCTGGACCACTCTCCACCCACATGTCCACCTGCCGAGACATCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 72 bp GGGGACGCAGGACCTCTGTGTGAGTGGCATGTTCCATaGCCGTCATCCCCAGGGACCTCCTGGGACACGTTT +
Preference number: 6 (lower is better)
Translates to: GDAGPLCEWHVP*PSSPGTSWDTF
Trigger: AAACGTGTCCCAGGAGGTCCCTGGGGATGACGGCCATGGAACATGCCACTCACACAGAGGTCCTGCGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp CGAACGTCCCTGATTTTCCGGCGCAGCTCAAGCTGCTaGTGGTGGAAGTCGGTGCGGGTGAGCGCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: RTSLIFRRSSSC*WWKSVRVSAFL
Trigger: CAGGAAGGCGCTCACCCGCACCGACTTCCACCACAAGCAGCTTGAGCTGCGCCGGAAAATCAGGGACGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 72 bp CCCGCAGGCAGCAGTGTCCGAGAGGTGAGCCAGGTTTaGTCTCTCCCTGTAGCTCCCTTCATCCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PAGSSVREVSQV*SLPVAPFIPSL
Trigger: GAGGGAGGGGATGAAGGGAGCTACAGGGAGAGACAAAACCTGGCTCACCTCTCGGACACTGCTGCCTGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 90 bp GTGGCCTTGCGAACGTCCCTGATTTTCCGGCGCAGCTCAAGCTGCTaGTGGTGGAAGTCGGTGCGGGTGAGCGCCTTCCTGTCCATCTTG +
Preference number: 6 (lower is better)
Translates to: VALRTSLIFRRSSSC*WWKSVRVSAFLSIL
Trigger: CAAGATGGACAGGAAGGCGCTCACCCGCACCGACTTCCACCACAAGCAGCTTGAGCTGCGCCGGAAAATCAGGGACGTTCGCAAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS TCA 72 bp CTGCTAAGCTCCCAAAGCCTGGTCCTCCAACGGAACTaGGAGGACCTGCCTGTGGGGACAGCCAGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: LLSSQSLVLQRN*EDLPVGTASRC
Trigger: ACACCTGCTGGCTGTCCCCACAGGCAGGTCCTCTCAGTTCCGTTGGAGGACCAGGCTTTGGGAGCTTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp TTGCGAACGTCCCTGATTTTCCGGCGCAGCTCAAGCTaGTTGTGGTGGAAGTCGGTGCGGGTGAGCGCCTTC +
Preference number: 6 (lower is better)
Translates to: LRTSLIFRRSSS*LWWKSVRVSAF
Trigger: GAAGGCGCTCACCCGCACCGACTTCCACCACAAGCAGCTTGAGCTGCGCCGGAAAATCAGGGACGTTCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 72 bp ACCATCAGGGGGTGGTCTGGGTCCAAAACCACCAGCTaGGACCCTTCGTCTTCTGCTTCCTCGTCACTCCCC +
Preference number: 6 (lower is better)
Translates to: TIRGWSGSKTTS*DPSSSASSSLP
Trigger: GGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS CCA 72 bp ACAGAAGTCAGGGCTACTCACCAATCTGCCCACTGCTaGCCCAGAGGTGACCTGGCCCATTTGCTCCGACGG +
Preference number: 6 (lower is better)
Translates to: TEVRATHQSAHC*PRGDLAHLLRR
Trigger: CCGTCGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGGTGAGTAGCCCTGACTTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572083.5
CDS CCA 72 bp TGGCATGTTCCATGGCCGTCATCCCCAGGGACCTCCTaGGACACGTTTACCTGTCGTTTGAGGGCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: WHVPWPSSPGTS*DTFTCRLRAPS
Trigger: GCTTGGGGCCCTCAAACGACAGGTAAACGTGTCCCAGGAGGTCCCTGGGGATGACGGCCATGGAACATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp GCCTGGACCGCCTTGCCATCGTGCTCGTCGATCAGCTaGCTCAGCCTTTTGATTTCAAGCTCCAGGGGCCCC +
Preference number: 6 (lower is better)
Translates to: AWTALPSCSSIS*LSLLISSSRGP
Trigger: GGGGCCCCTGGAGCTTGAAATCAAAAGGCTGAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGTCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 90 bp ATCTCCTGCTGCAGGCGCAGCCAGGTCACCTGGGCCTGGACCGCCTaGCCATCGTGCTCGTCGATCAGCTTGCTCAGCCTTTTGATTTCA +
Preference number: 6 (lower is better)
Translates to: ISCCRRSQVTWAWTA*PSCSSISLLSLLIS
Trigger: TGAAATCAAAAGGCTGAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCTGCGCCTGCAGCAGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS TCA 72 bp TGGCTGGAGACTGGGACTCACTCTGCTTCCACCAGTTaGTTCAGGAGGGTCGCCTTCTCCTCGCTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: WLETGTHSASTS*FRRVAFSSLSW
Trigger: CCAGCTCAGCGAGGAGAAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAGTGAGTCCCAGTCTCCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS GCA 72 bp TGGGTCCAAAACCACCAGCTGGGACCCTTCGTCTTCTaGTTCCTCGTCACTCCCCTCGGACTCCACTCTCTC +
Preference number: 6 (lower is better)
Translates to: WVQNHQLGPFVF*FLVTPLGLHSL
Trigger: GAGAGAGTGGAGTCCGAGGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000573474.5
ENST00000574799.5
CDS GCA 72 bp GTTAAAGCTCAGCGGGTGAGACACGTGCCACCACAGTaGCCGGCTTTTTCTTTCCGCGTCCCGAGACCTGGT +
Preference number: 6 (lower is better)
Translates to: VKAQRVRHVPPQ*PAFSFRVPRPG
Trigger: ACCAGGTCTCGGGACGCGGAAAGAAAAAGCCGGGCACTGTGGTGGCACGTGTCTCACCCGCTGAGCTTTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS GCA 72 bp AGCTCCAGCTCGCCCTGGATGGCTTGGCGGATGGCCTaGAACTCCTCCGTGAGTATCATTTGTTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SSSSPWMAWRMA*NSSVSIICSSW
Trigger: CCAGCTGGAACAAATGATACTCACGGAGGAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGAGCTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS GCA 72 bp GGAGAGCCAGTTACGTGTGAGACATCAGAGAGCCAGTaGACAGAGCTGCGCCCCACACGAGGGAGCTCACTA +
Preference number: 6 (lower is better)
Translates to: GEPVTCETSESQ*TELRPTRGSSL
Trigger: TAGTGAGCTCCCTCGTGTGGGGCGCAGCTCTGTGCACTGGCTCTCTGATGTCTCACACGTAACTGGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 72 bp GTCTTCCTCCTGAGCTCCAGCTCGCCCTGGATGGCTTaGCGGATGGCCTGCAACTCCTCCGTGAGTATCATT +
Preference number: 6 (lower is better)
Translates to: VFLLSSSSPWMA*RMACNSSVSII
Trigger: AATGATACTCACGGAGGAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGAGCTGGAGCTCAGGAGGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 72 bp CTGTGGATCTCGCCCTTCATGGCCCGGATCTCCGTCTaGCCGATCTCGGAATCCACTGAGGAACGCATCTCT +
Preference number: 6 (lower is better)
Translates to: LWISPFMARISV*PISESTEERIS
Trigger: AGAGATGCGTTCCTCAGTGGATTCCGAGATCGGCCAGACGGAGATCCGGGCCATGAAGGGCGAGATCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000573903.1
ENST00000574799.5
ENST00000575431.1
CDS CCA 72 bp ACACCCAAGTGGGCAGATGGCCAAGTCCTCTCGTCCTaGTGTTCAGGCAACCCTGGTGACACAGGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: TPKWADGQVLSS*CSGNPGDTGRG
Trigger: TCCTCTCCCTGTGTCACCAGGGTTGCCTGAACACCAGGACGAGAGGACTTGGCCATCTGCCCACTTGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571028.1
CDS CCA 72 bp GCCCTCTATCCCGGCACCGAGGGCAGGGCTGCAGGCTaGATTTCTAATACCCCTACAAGCATCTTGAACGGG +
Preference number: 6 (lower is better)
Translates to: ALYPGTEGRAAG*ISNTPTSILNG
Trigger: CCCGTTCAAGATGCTTGTAGGGGTATTAGAAATCCAGCCTGCAGCCCTGCCCTCGGTGCCGGGATAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp CTTATAGGCCTCAATCTCGCCGTCGGTGGATTTGGCTaGATGCTGGCATCCTCTGAGCGCCTCCAGCACCGC +
Preference number: 6 (lower is better)
Translates to: LIGLNLAVGGFG*MLASSERLQHR
Trigger: GCGGTGCTGGAGGCGCTCAGAGGATGCCAGCATCAAGCCAAATCCACCGACGGCGAGATTGAGGCCTATAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS CAA 72 bp AGGAGGGTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTaGTCCTGCATCTTGATGGTCTCCCTCTCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: RRVAFSSLSWFS*SCILMVSLSEA
Trigger: GGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGACCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
ENST00000574933.1
ENST00000575431.1
CDS CAA 72 bp TTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTGCATCTaGATGGTCTCCCTCTCAGAGGCCCCCGCCCTCCAT +
Preference number: 6 (lower is better)
Translates to: FSSLSWFSLSCI*MVSLSEAPALH
Trigger: ATGGAGGGCGGGGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS CAA 72 bp GTGGCTGGAGACTGGGACTCACTCTGCTTCCACCAGTaGATTCAGGAGGGTCGCCTTCTCCTCGCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: VAGDWDSLCFHQ*IQEGRLLLAEL
Trigger: CAGCTCAGCGAGGAGAAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAGTGAGTCCCAGTCTCCAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS CAA 90 bp ATCGTGCGCCGGGAGATCTCGCTCTGGCTGTTGGTGATGAGCTCGTaGACTTTCTTCACGTCCTGGTCCAGCTCCACCAGGGTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: IVRREISLWLLVMSS*TFFTSWSSSTRVFW
Trigger: CCAGAAGACCCTGGTGGAGCTGGACCAGGACGTGAAGAAAGTCAACGAGCTCATCACCAACAGCCAGAGCGAGATCTCCCGGCGCACGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 90 bp GGAGACCATCCGCTCCAGCTGCTTGTTGAGGAAGTTGATGAGCCCTaGCTTCCTCTCGATCAGGATCGTGCGCCGGGAGATCTCGCTCTG +
Preference number: 6 (lower is better)
Translates to: GDHPLQLLVEEVDEP*LPLDQDRAPGDLAL
Trigger: CAGAGCGAGATCTCCCGGCGCACGATCCTGATCGAGAGGAAGCAAGGGCTCATCAACTTCCTCAACAAGCAGCTGGAGCGGATGGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 90 bp AGGGTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTGCATCTaGATGGTCTCCCTCTCAGAGGCCTTCAGCGAGCGCACGAACTCA +
Preference number: 6 (lower is better)
Translates to: RVAFSSLSWFSLSCI*MVSLSEAFSERTNS
Trigger: TGAGTTCGTGCGCTCGCTGAAGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
ENST00000575431.1
CDS CAA 90 bp GACCCACGTGTGGCTGGAGACTGGGACTCACTCTGCTTCCACCAGTaGATTCAGGAGGGTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: DPRVAGDWDSLCFHQ*IQEGRLLLAELVQL
Trigger: AAGCTGAACCAGCTCAGCGAGGAGAAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAGTGAGTCCCAGTCTCCAGCCACACGTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS CAA 90 bp CGTCCCTGCCAGGACAGAGGAGAGGAGAGGACAGGGGGTCTCTTTTaGGCTGCTAAGCTCCCAAAGCCTGGTCCTCCAACGGAACTGAGA +
Preference number: 6 (lower is better)
Translates to: RPCQDRGEERTGGLF*AAKLPKPGPPTELR
Trigger: TCTCAGTTCCGTTGGAGGACCAGGCTTTGGGAGCTTAGCAGCCAAAAAGAGACCCCCTGTCCTCTCCTCTCCTCTGTCCTGGCAGGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 90 bp TTCCTCTCGATCAGGATCGTGCGCCGGGAGATCTCGCTCTGGCTGTaGGTGATGAGCTCGTTGACTTTCTTCACGTCCTGGTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: FLSIRIVRREISLWL*VMSSLTFFTSWSSS
Trigger: GGAGCTGGACCAGGACGTGAAGAAAGTCAACGAGCTCATCACCAACAGCCAGAGCGAGATCTCCCGGCGCACGATCCTGATCGAGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 90 bp CTGGATGGCTTGGCGGATGGCCTGCAACTCCTCCGTGAGTATCATTaGTTCCTGGAGACAAGGAGCCACAGGGTGCACGTGCCTGAAGAG +
Preference number: 6 (lower is better)
Translates to: LDGLADGLQLLREYH*FLETRSHRVHVPEE
Trigger: CTCTTCAGGCACGTGCACCCTGTGGCTCCTTGTCTCCAGGAACAAATGATACTCACGGAGGAGTTGCAGGCCATCCGCCAAGCCATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS TCA 72 bp CGGGTGAGGTCGGCCTCGAGTGTGTCGAAGTCTGCCTaGATCACCGACAGCTTTTCCTGCTTCTCTAGGAGG +
Preference number: 6 (lower is better)
Translates to: RVRSASSVSKSA*ITDSFSCFSRR
Trigger: CCTCCTAGAGAAGCAGGAAAAGCTGTCGGTGATTCAGGCAGACTTCGACACACTCGAGGCCGACCTCACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS TCA 72 bp CTCTGTAGAAATGCAGCGGGGAGAGCCAGTTACGTGTaGGACATCAGAGAGCCAGTGCACAGAGCTGCGCCC +
Preference number: 6 (lower is better)
Translates to: LCRNAAGRASYV*DIREPVHRAAP
Trigger: GGGCGCAGCTCTGTGCACTGGCTCTCTGATGTCTCACACGTAACTGGCTCTCCCCGCTGCATTTCTACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp AGCCAGGTCACCTGGGCCTGGACCGCCTTGCCATCGTaGTCGTCGATCAGCTTGCTCAGCCTTTTGATTTCA +
Preference number: 6 (lower is better)
Translates to: SQVTWAWTALPS*SSISLLSLLIS
Trigger: TGAAATCAAAAGGCTGAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS GCA 72 bp GTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTaGATCTTGATGGTCTCCCTCTCAGAGGCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: VAFSSLSWFSLS*ILMVSLSEAFS
Trigger: GCTGAAGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
ENST00000575431.1
CDS GCA 72 bp AGTATCATTTGTTCCTGGAGACAAGGAGCCACAGGGTaGACGTGCCTGAAGAGGCACCACCGTGCGCCAGGT +
Preference number: 6 (lower is better)
Translates to: SIICSWRQGATG*TCLKRHHRAPG
Trigger: ACCTGGCGCACGGTGGTGCCTCTTCAGGCACGTGCACCCTGTGGCTCCTTGTCTCCAGGAACAAATGATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp AGCTCCAGCTCGCCCTGGATGGCTTGGCGGATGGCCTaGAACTCCTCCGTGAGTATCATTTGTTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: SSSSPWMAWRMA*NSSVSIICSWR
Trigger: TCTCCAGGAACAAATGATACTCACGGAGGAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGAGCTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp GTCGCCTTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTaGATCTTGATGGTCTCCCTCTCAGAGGCCTGCATG +
Preference number: 6 (lower is better)
Translates to: VAFSSLSWFSLS*ILMVSLSEACM
Trigger: CATGCAGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 72 bp AGGCCTGTAGGTGCAGTGACCTTCATGACCCACGTGTaGCTGGAGACTGGGACTCACTCTGCTTCCACCAGT +
Preference number: 6 (lower is better)
Translates to: RPVGAVTFMTHV*LETGTHSASTS
Trigger: ACTGGTGGAAGCAGAGTGAGTCCCAGTCTCCAGCCACACGTGGGTCATGAAGGTCACTGCACCTACAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS CCA 72 bp GTCTTTTGGGACTTGCTACTCACCAACAGACGGGTTTaGGCAACCCAAGAAGGGCAGGGCGAGAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: VFWDLLLTNRRV*ATQEGQGERQQ
Trigger: CTGCTGCCTCTCGCCCTGCCCTTCTTGGGTTGCCCAAACCCGTCTGTTGGTGAGTAGCAAGTCCCAAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 72 bp ATGTTAAGATGGGTGGAGGGCACAAGAGGCCACAGCTaGTTCATCCGCTGGCCACTCCTCACAGGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: MLRWVEGTRGHS*FIRWPLLTGLL
Trigger: GAGAAGCCCTGTGAGGAGTGGCCAGCGGATGAACCAGCTGTGGCCTCTTGTGCCCTCCACCCATCTTAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 72 bp AGCCACAAACATGTGAGCAGCCGGTGGTGCTATTACTaGCCTGGGATCAGGAGAGGCCGTGACCTGATCAGG +
Preference number: 6 (lower is better)
Translates to: SHKHVSSRWCYY*PGIRRGRDLIR
Trigger: CCTGATCAGGTCACGGCCTCTCCTGATCCCAGGCCAGTAATAGCACCACCGGCTGCTCACATGTTTGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp TGCCCGGATCCTCTCCGTCTCGGCCTTCTTTACCACTaGTGTCATCACGCGGATGTCGTCACGCATGTCCTG +
Preference number: 6 (lower is better)
Translates to: CPDPLRLGLLYH*CHHADVVTHVL
Trigger: CAGGACATGCGTGACGACATCCGCGTGATGACACAAGTGGTAAAGAAGGCCGAGACGGAGAGGATCCGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS CAA 72 bp TTCTCCTCGCTGAGCTGGTTCAGCTTGTCCTGCATCTaGATGGTCTCCCTCTCAGAGGCCTGCATGGGGGAG +
Preference number: 6 (lower is better)
Translates to: FSSLSWFSLSCI*MVSLSEACMGE
Trigger: CTCCCCCATGCAGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS TCA 72 bp CCTGGATGGCTTGGCGGATGGCCTGCAACTCCTCCGTaGGTATCATTTGTTCCTGGAGACAAGGAGCCACAG +
Preference number: 6 (lower is better)
Translates to: PGWLGGWPATPP*VSFVPGDKEPQ
Trigger: CTGTGGCTCCTTGTCTCCAGGAACAAATGATACTCACGGAGGAGTTGCAGGCCATCCGCCAAGCCATCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp GGCAGGAAGCTTCCCCGTAGAAGTATCCCAGCGGAATaGCATGTGGTAGAAAGGCGGGAACGAGCGGTGTTT +
Preference number: 6 (lower is better)
Translates to: GRKLPRRSIPAE*HVVERRERAVF
Trigger: AAACACCGCTCGTTCCCGCCTTTCTACCACATGGCATTCCGCTGGGATACTTCTACGGGGAAGCTTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269318.9
CDS GCA 72 bp AAAACAGAAGTCAGGGCTACTCACCAATCTGCCCACTaGTGGCCCAGAGGTGACCTGGCCCATTTGCTCCGA +
Preference number: 6 (lower is better)
Translates to: KTEVRATHQSAH*WPRGDLAHLLR
Trigger: TCGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGGTGAGTAGCCCTGACTTCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572083.5
CDS GCA 72 bp CTCCTACATGGTCTTCAACGGACAGAGGCCTGTAGGTaGAGTGACCTTCATGACCCACGTGTGGCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: LLHGLQRTEACR*SDLHDPRVAGD
Trigger: GTCTCCAGCCACACGTGGGTCATGAAGGTCACTGCACCTACAGGCCTCTGTCCGTTGAAGACCATGTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573903.1
ENST00000574933.1
CDS CCA 72 bp GTCTCCACCTCCCCCTCTTCAATTGCAGCTTCCGCTTaGGTTGTGACTTCCTCAGGATGCTCTGTGCTACCG +
Preference number: 6 (lower is better)
Translates to: VSTSPSSIAASA*VVTSSGCSVLP
Trigger: CGGTAGCACAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAGGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000572083.5
ENST00000572270.1
ENST00000574099.1
ENST00000576033.5
ENST00000576241.1
CDS CCA 72 bp CTGTTGGTGATGAGCTCGTTGACTTTCTTCACGTCCTaGTCCAGCTCCACCAGGGTCTTCTGGTGTGCGTCC +
Preference number: 6 (lower is better)
Translates to: LLVMSSLTFFTS*SSSTRVFWCAS
Trigger: GGACGCACACCAGAAGACCCTGGTGGAGCTGGACCAGGACGTGAAGAAAGTCAACGAGCTCATCACCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 72 bp CTCTCGATCAGGATCGTGCGCCGGGAGATCTCGCTCTaGCTGTTGGTGATGAGCTCGTTGACTTTCTTCACG +
Preference number: 6 (lower is better)
Translates to: LSIRIVRREISL*LLVMSSLTFFT
Trigger: CGTGAAGAAAGTCAACGAGCTCATCACCAACAGCCAGAGCGAGATCTCCCGGCGCACGATCCTGATCGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 72 bp GCCCTCTCCATGGGTGATCCTCCCCATCTCACAGCATaGTATTTCGGCAGCTCTTGCCTTGGGACACCGATA +
Preference number: 6 (lower is better)
Translates to: ALSMGDPPHLTA*YFGSSCLGTPI
Trigger: TATCGGTGTCCCAAGGCAAGAGCTGCCGAAATACCATGCTGTGAGATGGGGAGGATCACCCATGGAGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp ATCAGGATCGTGCGCCGGGAGATCTCGCTCTGGCTGTaGGTGATGAGCTCGTTGACTTTCTTCACGTCCTGG +
Preference number: 6 (lower is better)
Translates to: IRIVRREISLWL*VMSSLTFFTSW
Trigger: CCAGGACGTGAAGAAAGTCAACGAGCTCATCACCAACAGCCAGAGCGAGATCTCCCGGCGCACGATCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 72 bp TTGCCATCGTGCTCGTCGATCAGCTTGCTCAGCCTTTaGATTTCAAGCTCCAGGGGCCCCACTTCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: LPSCSSISLLSL*ISSSRGPTSSP
Trigger: GGGGGAAGAAGTGGGGCCCCTGGAGCTTGAAATCAAAAGGCTGAGCAAGCTGATCGACGAGCACGATGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 90 bp CTCGATTTCTGCCCGGATCCTCTCCGTCTCGGCCTTCTTTACCACTaGTGTCATCACGCGGATGTCGTCACGCATGTCCTGGTCGATGTT +
Preference number: 6 (lower is better)
Translates to: LDFCPDPLRLGLLYH*CHHADVVTHVLVDV
Trigger: AACATCGACCAGGACATGCGTGACGACATCCGCGTGATGACACAAGTGGTAAAGAAGGCCGAGACGGAGAGGATCCGGGCAGAAATCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS CAA 90 bp GAGGGCAGGGCTGCAGGCTGGATTTCTAATACCCCTACAAGCATCTaGAACGGGTGTGGAAATTACATCCTGGTGCAGAACGCCCACCGC +
Preference number: 6 (lower is better)
Translates to: EGRAAGWISNTPTSI*NGCGNYILVQNAHR
Trigger: GCGGTGGGCGTTCTGCACCAGGATGTAATTTCCACACCCGTTCAAGATGCTTGTAGGGGTATTAGAAATCCAGCCTGCAGCCCTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS TCA 72 bp CCTCCCCCTCTTCAATTGCAGCTTCCGCTTGGGTTGTaGCTTCCTCAGGATGCTCTGTGCTACCGACAGCTT +
Preference number: 6 (lower is better)
Translates to: PPPLQLQLPLGL*LPQDALCYRQL
Trigger: AAGCTGTCGGTAGCACAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000572083.5
ENST00000572270.1
ENST00000574099.1
ENST00000576033.5
ENST00000576241.1
CDS TCA 72 bp CTACGAAAGGTGGAGGGGAAGTTAAAGCTCAGCGGGTaGGACACGTGCCACCACAGTGCCCGGCTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: LRKVEGKLKLSG*DTCHHSARLFL
Trigger: AAGAAAAAGCCGGGCACTGTGGTGGCACGTGTCTCACCCGCTGAGCTTTAACTTCCCCTCCACCTTTCGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS TCA 72 bp AGACACTTGCAAATCTGTGGAGCACCGGGACCTGGTTaGTGCTCAGACACTGTGAGTCTCCAGGAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: RHLQICGAPGPG*CSDTVSLQERE
Trigger: CTCCCTCTCCTGGAGACTCACAGTGTCTGAGCATCAACCAGGTCCCGGTGCTCCACAGATTTGCAAGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp GCAGCAGTGTGGCTTCCGTCTCTGTCCGGTTCAGGATaGTCGCCAGCTTCTCGTTCTTTTCTTCCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: AAVWLPSLSGSG*SPASRSFLPPS
Trigger: TGAAGGAGGAAGAAAAGAACGAGAAGCTGGCGAGCATCCTGAACCGGACAGAGACGGAAGCCACACTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS GCA 72 bp GAGCGCACGAACTCATTCTCTGTCACCCGGTTGTTCTaGTCCAGCTCCTCCGAGCTGCACCGGTTTTTATTC +
Preference number: 6 (lower is better)
Translates to: ERTNSFSVTRLF*SSSSELHRFLF
Trigger: GAATAAAAACCGGTGCAGCTCGGAGGAGCTGGAGCAGAACAACCGGGTGACAGAGAATGAGTTCGTGCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
ENST00000575431.1
CDS CCA 72 bp GGCTTTTTCTTTCCGCGTCCCGAGACCTGGTCACCCTaGGTGGTTTTAGGAATGAAGGCAGCACCTGTGTCT +
Preference number: 6 (lower is better)
Translates to: GFFFPRPETWSP*VVLGMKAAPVS
Trigger: AGACACAGGTGCTGCCTTCATTCCTAAAACCACCCAGGGTGACCAGGTCTCGGGACGCGGAAAGAAAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374876.4
CDS CCA 72 bp TGCAGTGACCTTCATGACCCACGTGTGGCTGGAGACTaGGACTCACTCTGCTTCCACCAGTTGATTCAGGAG +
Preference number: 6 (lower is better)
Translates to: CSDLHDPRVAGD*DSLCFHQLIQE
Trigger: CTCCTGAATCAACTGGTGGAAGCAGAGTGAGTCCCAGTCTCCAGCCACACGTGGGTCATGAAGGTCACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574933.1
CDS CCA 72 bp TCTCAACCCTCCCGCTGTGACTGCGAACTGGGCAGCTaGGCAGGCAGTGGTTCACATTTACAAAATACAGGG +
Preference number: 6 (lower is better)
Translates to: SQPSRCDCELGS*AGSGSHLQNTG
Trigger: CCCTGTATTTTGTAAATGTGAACCACTGCCTGCCCAGCTGCCCAGTTCGCAGTCACAGCGGGAGGGTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp TGTCTCCACCTCCCCCTCTTCAATTGCAGCTTCCGCTaGGGTTGTGACTTCCTCAGGATGCTCTGTGCTACC +
Preference number: 6 (lower is better)
Translates to: CLHLPLFNCSFR*GCDFLRMLCAT
Trigger: GGTAGCACAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAGGTGGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000572083.5
ENST00000572270.1
ENST00000574099.1
ENST00000576033.5
ENST00000576241.1
CDS CAA 72 bp TCGGAGACCATCCGCTCCAGCTGCTTGTTGAGGAAGTaGATGAGCCCTTGCTTCCTCTCGATCAGGATCGTG +
Preference number: 6 (lower is better)
Translates to: SETIRSSCLLRK*MSPCFLSIRIV
Trigger: CACGATCCTGATCGAGAGGAAGCAAGGGCTCATCAACTTCCTCAACAAGCAGCTGGAGCGGATGGTCTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 72 bp GCTCCTCTCTCAAGGAGAGCTCTGAAGTCCGTGAGCTaGGAGCCATTTCGTGACATTTCTCAACCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: APLSRRALKSVS*EPFRDISQPSR
Trigger: GCGGGAGGGTTGAGAAATGTCACGAAATGGCTCCAAGCTCACGGACTTCAGAGCTCTCCTTGAGAGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp CCCATCTCACAGCATGGTATTTCGGCAGCTCTTGCCTaGGGACACCGATACTCAGCTGACAGCTCCATAGGG +
Preference number: 6 (lower is better)
Translates to: PISQHGISAALA*GHRYSADSSIG
Trigger: CCCTATGGAGCTGTCAGCTGAGTATCGGTGTCCCAAGGCAAGAGCTGCCGAAATACCATGCTGTGAGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp TCCTCCCCATCTCACAGCATGGTATTTCGGCAGCTCTaGCCTTGGGACACCGATACTCAGCTGACAGCTCCA +
Preference number: 6 (lower is better)
Translates to: SSPSHSMVFRQL*PWDTDTQLTAP
Trigger: TGGAGCTGTCAGCTGAGTATCGGTGTCCCAAGGCAAGAGCTGCCGAAATACCATGCTGTGAGATGGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 90 bp TCCTTCTGCAGCCTCAGGATGAGCTGGTTGAAGTATTTGGTGGTCTaGTTGGAGGTCATGTGCTCCTGCAGCTTCTCCCGGATGGCAGCA +
Preference number: 6 (lower is better)
Translates to: SFCSLRMSWLKYLVV*LEVMCSCSFSRMAA
Trigger: TGCTGCCATCCGGGAGAAGCTGCAGGAGCACATGACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAGGCTGCAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 90 bp ACCTTCCATGCTCCTCTCTCAAGGAGAGCTCTGAAGTCCGTGAGCTaGGAGCCATTTCGTGACATTTCTCAACCCTCCCGCTGTGACTGC +
Preference number: 6 (lower is better)
Translates to: TFHAPLSRRALKSVS*EPFRDISQPSRCDC
Trigger: GCAGTCACAGCGGGAGGGTTGAGAAATGTCACGAAATGGCTCCAAGCTCACGGACTTCAGAGCTCTCCTTGAGAGAGGAGCATGGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 90 bp GTGATCCTCCCCATCTCACAGCATGGTATTTCGGCAGCTCTTGCCTaGGGACACCGATACTCAGCTGACAGCTCCATAGGGTCTTTTGGG +
Preference number: 6 (lower is better)
Translates to: VILPISQHGISAALA*GHRYSADSSIGSFG
Trigger: CCCAAAAGACCCTATGGAGCTGTCAGCTGAGTATCGGTGTCCCAAGGCAAGAGCTGCCGAAATACCATGCTGTGAGATGGGGAGGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS TCA 72 bp TCCCAAAGCATAATCTGGTGTTCTGCTTCCACCAGTTaGTTCAGGAGGGTCGCCTTCTCCTCGCTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SQSIIWCSASTS*FRRVAFSSLSW
Trigger: CCAGCTCAGCGAGGAGAAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAACACCAGATTATGCTTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
ENST00000575431.1
CDS TCA 72 bp TTCGGCAGCTCTTGCCTTGGGACACCGATACTCAGCTaGCAGCTCCATAGGGTCTTTTGGGACTTGCTACTC +
Preference number: 6 (lower is better)
Translates to: FGSSCLGTPILS*QLHRVFWDLLL
Trigger: GAGTAGCAAGTCCCAAAAGACCCTATGGAGCTGTCAGCTGAGTATCGGTGTCCCAAGGCAAGAGCTGCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp TGGTTGAAGTATTTGGTGGTCTTGTTGGAGGTCATGTaGTCCTGCAGCTTCTCCCGGATGGCAGCATCCGTC +
Preference number: 6 (lower is better)
Translates to: WLKYLVVLLEVM*SCSFSRMAASV
Trigger: GACGGATGCTGCCATCCGGGAGAAGCTGCAGGAGCACATGACCTCCAACAAGACCACCAAATACTTCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CCA 72 bp CACACTCTAAGGCTTTACAAGGCTCTCAAGCTGCAATaGCAGAGCCAAGCAGCTGCGACAGAAAGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: HTLRLYKALKLQ*QSQAAATESVR
Trigger: CCTCACGCTTTCTGTCGCAGCTGCTTGGCTCTGCCATTGCAGCTTGAGAGCCTTGTAAAGCCTTAGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573903.1
CDS CAA 72 bp AGCCTCAGGATGAGCTGGTTGAAGTATTTGGTGGTCTaGTTGGAGGTCATGTGCTCCTGCAGCTTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: SLRMSWLKYLVV*LEVMCSCSFSR
Trigger: CCGGGAGAAGCTGCAGGAGCACATGACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 72 bp CTCCCAAAGCATAATCTGGTGTTCTGCTTCCACCAGTaGATTCAGGAGGGTCGCCTTCTCCTCGCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: LPKHNLVFCFHQ*IQEGRLLLAEL
Trigger: CAGCTCAGCGAGGAGAAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAACACCAGATTATGCTTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
ENST00000575431.1
CDS CAA 72 bp CTTATAGGCCTCAATCTCGCCGTCGGTGGATTTGGCTaGATGCTGGCATCCTCTGTAGAAATGCAGCGGGGA +
Preference number: 6 (lower is better)
Translates to: LIGLNLAVGGFG*MLASSVEMQRG
Trigger: TCCCCGCTGCATTTCTACAGAGGATGCCAGCATCAAGCCAAATCCACCGACGGCGAGATTGAGGCCTATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 90 bp TTGGTCTTCTCCTTCTGCAGCCTCAGGATGAGCTGGTTGAAGTATTaGGTGGTCTTGTTGGAGGTCATGTGCTCCTGCAGCTTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LVFSFCSLRMSWLKY*VVLLEVMCSCSFSR
Trigger: CCGGGAGAAGCTGCAGGAGCACATGACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAGGCTGCAGAAGGAGAAGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 90 bp TGGGACTTGTTACTTCTCTGCCACCCCCAGGCTGTTGTCACGTCTTaGTCCTGTTTGTCAGGAACCATAGCACTATATCATGCCGGCCCG +
Preference number: 6 (lower is better)
Translates to: WDLLLLCHPQAVVTS*SCLSGTIALYHAGP
Trigger: CGGGCCGGCATGATATAGTGCTATGGTTCCTGACAAACAGGACAAAGACGTGACAACAGCCTGGGGGTGGCAGAGAAGTAACAAGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576033.5
CDS TCA 72 bp GGGCAATGTCTTCTTCCAGTTGCTGGGCTCGAGTGGTaGGCTGGTCCACATACAGGTCCTGCTTTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: GQCLLPVAGLEW*AGPHTGPAFSS
Trigger: AGAAGAAAAAGCAGGACCTGTATGTGGACCAGCTCACCACTCGAGCCCAGCAACTGGAAGAAGACATTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269318.9
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS GCA 72 bp ATTGCAGCTTCCGCTTGGGTTGTGACTTCCTCAGGATaGTCTGTGCTACCGACAGCTTCTTCACCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: IAASAWVVTSSG*SVLPTASSPFW
Trigger: CCAGAAAGGTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269318.9
ENST00000374876.4
ENST00000374877.7
ENST00000397545.9
ENST00000572083.5
ENST00000572270.1
ENST00000574099.1
ENST00000576033.5
ENST00000576241.1
CDS GCA 72 bp GCACGGCGGCTCTTACTTTCTACTCGTAGTTTCTTCTaGTCCATGATGTGGAGCTCCTTCTTGGATGCGTCC +
Preference number: 6 (lower is better)
Translates to: ARRLLLSTRSFF*SMMWSSFLDAS
Trigger: GGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGTAAGAGCCGCCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS GCA 72 bp TACTCAGCTGACAGCTCCATAGGGTCTTTTGGGACTTaGTACTCACCAACAGACGGGTTTGGGCAACCCAAG +
Preference number: 6 (lower is better)
Translates to: YSADSSIGSFGT*YSPTDGFGQPK
Trigger: CTTGGGTTGCCCAAACCCGTCTGTTGGTGAGTAGCAAGTCCCAAAAGACCCTATGGAGCTGTCAGCTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CCA 72 bp TTGCTTTCTACTCGTAGTTTCTTCTGCTCCATGATGTaGAGCTCCTTCTTGGATGCGTCCAGGGAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LLSTRSFFCSMM*SSFLDASREAS
Trigger: GCTGGCCTCCCTGGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS CAA 72 bp CTCAGGATGAGCTGGTTGAAGTATTTGGTGGTCTTGTaGGAGGTCATGTGCTCCTGCAGCTTCTCCCGGATG +
Preference number: 6 (lower is better)
Translates to: LRMSWLKYLVVL*EVMCSCSFSRM
Trigger: CATCCGGGAGAAGCTGCAGGAGCACATGACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 72 bp TCCTTCTGCAGCCTCAGGATGAGCTGGTTGAAGTATTaGGTGGTCTTGTTGGAGGTCATGTGCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SFCSLRMSWLKY*VVLLEVMCSCS
Trigger: GCTGCAGGAGCACATGACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAGGCTGCAGAAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 90 bp TGCTCCAGCTCCTCCGAGCTGCACCGGTTTTTATTCATCAACATGTaGAGCTTCTTCAGGTCGTTGTCCAGGTCCTTCATGTGGTGCTCG +
Preference number: 6 (lower is better)
Translates to: CSSSSELHRFLFINM*SFFRSLSRSFMWCS
Trigger: CGAGCACCACATGAAGGACCTGGACAACGACCTGAAGAAGCTCAACATGTTGATGAATAAAAACCGGTGCAGCTCGGAGGAGCTGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
ENST00000575431.1
CDS CAA 90 bp GATGGATTTCTTATAGGCCTCAATCTCGCCGTCGGTGGATTTGGCTaGATGCTGGCATCCTCTGTAGAAATGCAGCGGGGAGAGCCAGTT +
Preference number: 6 (lower is better)
Translates to: DGFLIGLNLAVGGFG*MLASSVEMQRGEPV
Trigger: AACTGGCTCTCCCCGCTGCATTTCTACAGAGGATGCCAGCATCAAGCCAAATCCACCGACGGCGAGATTGAGGCCTATAAGAAATCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 90 bp GTCATCATGTTGGTCTTCTCCTTCTGCAGCCTCAGGATGAGCTGGTaGAAGTATTTGGTGGTCTTGTTGGAGGTCATGTGCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: VIMLVFSFCSLRMSW*KYLVVLLEVMCSCS
Trigger: GCTGCAGGAGCACATGACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAGGCTGCAGAAGGAGAAGACCAACATGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS TCA 72 bp CTTAAAATCCGGGTGTCCTCAGCTTGGGCCAAGTACTaGGCCTCAAACAGGGCAATGTCTTCTTCCAGTTGC +
Preference number: 6 (lower is better)
Translates to: LKIRVSSAWAKY*ASNRAMSSSSC
Trigger: GCAACTGGAAGAAGACATTGCCCTGTTTGAGGCTCAGTACTTGGCCCAAGCTGAGGACACCCGGATTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269318.9
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS TCA 72 bp ATCAATGGCACAGCTGCTGTCATGCCTCATGCAGCATaGTGGGAAAGTGACAGCAAAAGCATCCCAACGGTC +
Preference number: 6 (lower is better)
Translates to: INGTAAVMPHAA*WESDSKSIPTV
Trigger: GACCGTTGGGATGCTTTTGCTGTCACTTTCCCATCATGCTGCATGAGGCATGACAGCAGCTGTGCCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574799.5
CDS CCA 72 bp GAGAGAAGCCTCAGTGATTCTATTCTGGGGCATCAATaGCACAGCTGCTGTCATGCCTCATGCAGCATGATG +
Preference number: 6 (lower is better)
Translates to: ERSLSDSILGHQ*HSCCHASCSMM
Trigger: CATCATGCTGCATGAGGCATGACAGCAGCTGTGCCATTGATGCCCCAGAATAGAATCACTGAGGCTTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574799.5
CDS CCA 72 bp TTACTTTCTACTCGTAGTTTCTTCTGCTCCATGATGTaGAGCTCCTTCTTGGATGCGTCCAGGGAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LLSTRSFFCSMM*SSFLDASREAS
Trigger: GCTGGCCTCCCTGGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 90 bp GGCAGGCAGTGGTTCACATTTACAAAATACAGGGAGCATGCGCGTTaGTTATTTGCTTTTAAGGCTGCGTGCAAATCCAGCGACGTGCCC +
Preference number: 6 (lower is better)
Translates to: GRQWFTFTKYREHAR*LFAFKAACKSSDVP
Trigger: GGGCACGTCGCTGGATTTGCACGCAGCCTTAAAAGCAAATAACAAACGCGCATGCTCCCTGTATTTTGTAAATGTGAACCACTGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS TCA 72 bp CAATCTTGCTTTCTACTCGTAGTTTCTTCTGCTCCATaGTGTGGAGCTCCTTCTTGGATGCGTCCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: QSCFLLVVSSAP*CGAPSWMRPGR
Trigger: CCTCCCTGGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGCAAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp ATGTCTTCTTCCAGTTGCTGGGCTCGAGTGGTGAGCTaGTCCACATACAGGTCCTGCTTTTTCTTCTCGATT +
Preference number: 6 (lower is better)
Translates to: MSSSSCWARVVS*STYRSCFFFSI
Trigger: AATCGAGAAGAAAAAGCAGGACCTGTATGTGGACCAGCTCACCACTCGAGCCCAGCAACTGGAAGAAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269318.9
ENST00000374877.7
ENST00000397545.9
ENST00000574799.5
CDS CCA 72 bp ATTTCTTATAGGCCTCAATCTCGCCGTCGGTGGATTTaGCTTGATGCTGGCATCCTCTGTAGAAATGCAGCG +
Preference number: 6 (lower is better)
Translates to: ISYRPQSRRRWI*LDAGILCRNAA
Trigger: CGCTGCATTTCTACAGAGGATGCCAGCATCAAGCCAAATCCACCGACGGCGAGATTGAGGCCTATAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp TTGGTCTTCTCCTTCTGCAGCCTCAGGATGAGCTGGTaGAAGTATTTGGTGGTCTTGTTGGAGGTCATGTGC +
Preference number: 6 (lower is better)
Translates to: LVFSFCSLRMSW*KYLVVLLEVMC
Trigger: GCACATGACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAGGCTGCAGAAGGAGAAGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 90 bp CTGCACCGGTTTTTATTCATCAACATGTTGAGCTTCTTCAGGTCGTaGTCCAGGTCCTTCATGTGGTGCTCGATCTCCTTCTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LHRFLFINMLSFFRS*SRSFMWCSISFCSF
Trigger: GAAGGAGCAGAAGGAGATCGAGCACCACATGAAGGACCTGGACAACGACCTGAAGAAGCTCAACATGTTGATGAATAAAAACCGGTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
ENST00000575431.1
CDS TCA 72 bp CCTCCGAGCTGCACCGGTTTTTATTCATCAACATGTTaGGCTTCTTCAGGTCGTTGTCCAGGTCCTTCATGT +
Preference number: 6 (lower is better)
Translates to: PPSCTGFYSSTC*ASSGRCPGPSC
Trigger: ACATGAAGGACCTGGACAACGACCTGAAGAAGCTCAACATGTTGATGAATAAAAACCGGTGCAGCTCGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
ENST00000575431.1
CDS TCA 72 bp GTATTTATAATGTATTCCCAAGTTCCTCACATAGGGTaGCAAACCCCGTGGGCCGTGCGACACTGGCACAAA +
Preference number: 6 (lower is better)
Translates to: VFIMYSQVPHIG*QTPWAVRHWHK
Trigger: TTTGTGCCAGTGTCGCACGGCCCACGGGGTTTGTCACCCTATGTGAGGAACTTGGGAATACATTATAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572083.5
CDS GCA 72 bp TTCTATTCTGGGGCATCAATGGCACAGCTGCTGTCATaGCTCATGCAGCATGATGGGAAAGTGACAGCAAAA +
Preference number: 6 (lower is better)
Translates to: FYSGASMAQLLS*LMQHDGKVTAK
Trigger: TTTTGCTGTCACTTTCCCATCATGCTGCATGAGGCATGACAGCAGCTGTGCCATTGATGCCCCAGAATAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574799.5
CDS CAA 72 bp CTGAAGTGTTCACTACTGGGCTCCTTATGCAAACGTTaGCCAACCTCTGTAATCCCAGCTACTCAGGAGGTT +
Preference number: 6 (lower is better)
Translates to: LKCSLLGSLCKR*PTSVIPATQEV
Trigger: AACCTCCTGAGTAGCTGGGATTACAGAGGTTGGCAAACGTTTGCATAAGGAGCCCAGTAGTGAACACTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573903.1
CDS CAA 72 bp GCTGCAGGCTGGATTTCTAATACCCCTACAAGCATCTaGAACGGGTGTGGAAATTACATCCTGGTGCAGAAC +
Preference number: 6 (lower is better)
Translates to: AAGWISNTPTSI*NGCGNYILVQN
Trigger: GTTCTGCACCAGGATGTAATTTCCACACCCGTTCAAGATGCTTGTAGGGGTATTAGAAATCCAGCCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp ATGTCCAGGGTGGTCTGGGCAATGTCACCGTTGATTTaGGAAAGATGTGTCATCATGTTGGTCTTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: MSRVVWAMSPLI*ERCVIMLVFSF
Trigger: GAAGGAGAAGACCAACATGATGACACATCTTTCCAAAATCAACGGTGACATTGCCCAGACCACCCTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 72 bp TGTGTGATGTCCAGGGTGGTCTGGGCAATGTCACCGTaGATTTTGGAAAGATGTGTCATCATGTTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: CVMSRVVWAMSP*ILERCVIMLVF
Trigger: GAAGACCAACATGATGACACATCTTTCCAAAATCAACGGTGACATTGCCCAGACCACCCTGGACATCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS GCA 72 bp TTGGAAAGATGTGTCATCATGTTGGTCTTCTCCTTCTaGAGCCTCAGGATGAGCTGGTTGAAGTATTTGGTG +
Preference number: 6 (lower is better)
Translates to: LERCVIMLVFSF*SLRMSWLKYLV
Trigger: CACCAAATACTTCAACCAGCTCATCCTGAGGCTGCAGAAGGAGAAGACCAACATGATGACACATCTTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
CDS CAA 72 bp CATTTACAAAATACAGGGAGCATGCGCGTTTGTTATTaGCTTTTAAGGCTGCGTGCAAATCCAGCGACGTGC +
Preference number: 6 (lower is better)
Translates to: HLQNTGSMRVCY*LLRLRANPATC
Trigger: GCACGTCGCTGGATTTGCACGCAGCCTTAAAAGCAAATAACAAACGCGCATGCTCCCTGTATTTTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5
CDS CAA 72 bp TTTTTATTCATCAACATGTTGAGCTTCTTCAGGTCGTaGTCCAGGTCCTTCATGTGGTGCTCGATCTCCTTC +
Preference number: 6 (lower is better)
Translates to: FLFINMLSFFRS*SRSFMWCSISF
Trigger: GAAGGAGATCGAGCACCACATGAAGGACCTGGACAACGACCTGAAGAAGCTCAACATGTTGATGAATAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374877.7
ENST00000397545.9
ENST00000572253.5
ENST00000574799.5
ENST00000575431.1
CDS CAA 72 bp TGGTTCACATTTACAAAATACAGGGAGCATGCGCGTTaGTTATTTGCTTTTAAGGCTGCGTGCAAATCCAGC +
Preference number: 6 (lower is better)
Translates to: WFTFTKYREHAR*LFAFKAACKSS
Trigger: GCTGGATTTGCACGCAGCCTTAAAAGCAAATAACAAACGCGCATGCTCCCTGTATTTTGTAAATGTGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572253.5