Pregenerated sensors for CCDC38 (Homo sapiens)
Ensembl gene IDs: ENSG00000165972Ensembl transcript IDs: ENST00000344280.8, ENST00000546386.1, ENST00000546803.5, ENST00000546947.5, ENST00000548771.1, ENST00000549752.1, ENST00000549876.5
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACTCAGCTAACGTCAGATTCAGCAATTCTATTCCTAGGTATACATaGAAAGAAACTTTCTTGTATACCAGGAGATGTGAACAAGAATGT | + |
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Preference number: 1 (lower is better) Translates to: YSANVRFSNSIPRYT*KETFLYTRRCEQEC Trigger: ACATTCTTGTTCACATCTCCTGGTATACAAGAAAGTTTCTTTGCATGTATACCTAGGAATAGAATTGCTGAATCTGACGTTAGCTGAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR CCA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTACCTGAGGTCAGGAGTTaGAGACTAGCCTGGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLPEVRS*RLAWPA Trigger: TGCTGGCCAGGCTAGTCTCCAACTCCTGACCTCAGG...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR TCA 90 bp | TTAGGGAACTGGTACCAAATATGTCAAAACTCATGCTGCTTGTTGTTTTGTGAGGCACTTCAGCTTGGGTaGCAGAGAAGCTGTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LGNWYQICQNSCCLLFCEALQLG*QRSCLS Trigger: AGACAGACAGCTTCTCTGTCACCCAAGCTGAAGTGC...CTCACAAAACAACAAGCAGCATGAGTTTTGACATATTTGGTACCAGTTCCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR TCA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTAGTTGGGCCCCTGATGTaGACCTCCATATGGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLVGPLM*TSIWNA Trigger: AGCATTCCATATGGAGGTTCACATCAGGGGCCCAAC...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR CCA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTACTTCCCCTTTTCTCCTaGCTGGCAGGAATATGGATG | + |
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Preference number: 2 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLLPLFS*LAGIWM Trigger: CATCCATATTCCTGCCAGCCAGGAGAAAAGGGGAAG...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR CCA 90 bp | TTAGGGAACTGGTACCAAATATGTCAAAACTCATGCTGCTTGTTGTTTTGTGAGCCCTTTTCTCCTGGCTaGCAGGAATATGGATGTAAT | + |
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Preference number: 2 (lower is better) Translates to: LGNWYQICQNSCCLLFCEPFSPG*QEYGCN Trigger: ATTACATCCATATTCCTGCCAGCCAGGAGAAAAGGG...CTCACAAAACAACAAGCAGCATGAGTTTTGACATATTTGGTACCAGTTCCCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR CCA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTAAAAATTAGCCAGGCGTaGTGGGCACCTGTAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLKISQA*WAPVIP Trigger: TGGAATTACAGGTGCCCACCACGCCTGGCTAATTTT...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR TCA 90 bp | TGTATCTCTTGTCAACATCCAGGAAACTGTAGCAAGCTAACTTATGAGTTTGCACCCTGTCACAGTTCTTaGCAAAGTAATATAAATCCT | + |
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Preference number: 2 (lower is better) Translates to: CISCQHPGNCSKLTYEFAPCHSS*QSNINP Trigger: AGGATTTATATTACTTTGTCAAGAACTGTGACAGGG...TGCAAACTCATAAGTTAGCTTGCTACAGTTTCCTGGATGTTGACAAGAGATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR TCA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTACTGCTTGTTGTTTTGTaGGTAATAAAGTCGTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLLLVVL*VIKSFV Trigger: GACAAACGACTTTATTACTCACAAAACAACAAGCAG...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR TCA 90 bp | GCAATTCTATTCCTAGGTATACATGCAAAGAAACTTTCTTGTATACCAGGAGATTTAGTAGCAATAAGCTaGAAACAACCCAAATACCCA | + |
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Preference number: 2 (lower is better) Translates to: AILFLGIHAKKLSCIPGDLVAIS*KQPKYP Trigger: TGGGTATTTGGGTTGTTTTCAGCTTATTGCTACTAA...ATCTCCTGGTATACAAGAAAGTTTCTTTGCATGTATACCTAGGAATAGAATTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGGTTGAGCCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCTCAAATATAGAAGTATaGAGTATGGAGTCCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SLVEPSFTLPIKLGCSSFSNIEV*SMESFS Trigger: TGAGAAGGACTCCATACTCCATACTTCTATATTTGA...GAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGGCTCAACCAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| 3UTR CCA 72 bp | ACCAAGAACATAGCCCAGGAACAGGCCAGAAGGAGTTaGGCCCCTGATGTGAACCTCCATATGGAATGCTTG | + |
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Preference number: 3 (lower is better) Translates to: TKNIAQEQARRS*APDVNLHMECL Trigger: CAAGCATTCCATATGGAGGTTCACATCAGGGGCCCAACTCCTTCTGGCCTGTTCCTGGGCTATGTTCTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR CCA 72 bp | ACACTCAGAGTAGAGGCTATGTTTCTCAGCCTCCCTTaGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTC | + |
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Preference number: 3 (lower is better) Translates to: TLRVEAMFLSLP*RQVSGSGECNF Trigger: GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACATAGCCTCTACTCTGAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR-3UTR CAA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTATGTAGTCCCAGCACTTaGGGAGACCGAGGCGGGCGG | + |
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Preference number: 3 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLCSPST*GDRGGR Trigger: CCGCCCGCCTCGGTCTCCCAAAGTGCTGGGACTACA...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR CCA 72 bp | GAAGCTGTCTGTCTAGTATCCCATTATCCCATTCCCTaGTTGTATTATAGTTTACATAACCAACCCTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: EAVCLVSHYPIP*LYYSLHNQPFP Trigger: TGGAAAGGGTTGGTTATGTAAACTATAATACAACCAGGGAATGGGATAATGGGATACTAGACAGACAGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR CCA 72 bp | ATTAATCTTAAAAGAAGGCTATGGGTCTTAGGGAACTaGTACCAAATATGTCAAAACTCATGCTGCTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: INLKRRLWVLGN*YQICQNSCCLL Trigger: CAACAAGCAGCATGAGTTTTGACATATTTGGTACCAGTTCCCTAAGACCCATAGCCTTCTTTTAAGATTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR CCA 72 bp | TGTCAGGTTGTAATTTCTTGTGAAGATCCTCGTCTTTaGGTTCTGATGGGTTCAAAGGTTCATATTATGTTA | + |
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Preference number: 3 (lower is better) Translates to: CQVVISCEDPRL*VLMGSKVHIML Trigger: TAACATAATATGAACCTTTGAACCCATCAGAACCCAAAGACGAGGATCTTCACAAGAAATTACAACCTGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | ATGTTTCTCAGCCTCCCTTGGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTCTTTCTCAGCCTCCCTTaGAGGCAGGTCAGCGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: MFLSLPWRQVSGSGECNFFLSLP*RQVSGS Trigger: ACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAA...GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR TCA 90 bp | ATGTTTCTCAGCCTCCCTTGGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTCGTTGGGCCCCTGATGTaGACCTCCATATGGAATGCT | + |
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Preference number: 4 (lower is better) Translates to: MFLSLPWRQVSGSGECNFVGPLM*TSIWNA Trigger: AGCATTCCATATGGAGGTTCACATCAGGGGCCCAAC...GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | ATGTTTCTCAGCCTCCCTTGGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTCGGACATTTTCTTGCCTaGCCCTCAGCGAGTTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: MFLSLPWRQVSGSGECNFGHFLA*PSASLD Trigger: ATCCAAACTCGCTGAGGGCCAGGCAAGAAAATGTCC...GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | ATGTTTCTCAGCCTCCCTTGGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTCCTTCCCCTTTTCTCCTaGCTGGCAGGAATATGGATG | + |
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Preference number: 4 (lower is better) Translates to: MFLSLPWRQVSGSGECNFLPLFS*LAGIWM Trigger: CATCCATATTCCTGCCAGCCAGGAGAAAAGGGGAAG...GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR GCA 90 bp | TTAGGGAACTGGTACCAAATATGTCAAAACTCATGCTGCTTGTTGTTTTGTGAGTGGCCAACGGATAAGTaGGGGGCACCCGCCACCCGC | + |
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Preference number: 4 (lower is better) Translates to: LGNWYQICQNSCCLLFCEWPTDK*GAPATR Trigger: GCGGGTGGCGGGTGCCCCGCACTTATCCGTTGGCCA...CTCACAAAACAACAAGCAGCATGAGTTTTGACATATTTGGTACCAGTTCCCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | ATGTTTCTCAGCCTCCCTTGGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTCAAAATTAGCCAGGCGTaGTGGGCACCTGTAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: MFLSLPWRQVSGSGECNFKISQA*WAPVIP Trigger: TGGAATTACAGGTGCCCACCACGCCTGGCTAATTTT...GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| 3UTR CAA 72 bp | AATATGGATGTAATCACTGGTGTGGAAGCAGCCGTCTaGGACCAAGAACATAGCCCAGGAACAGGCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: NMDVITGVEAAV*DQEHSPGTGQK Trigger: CTTCTGGCCTGTTCCTGGGCTATGTTCTTGGTCCAAGACGGCTGCTTCCACACCAGTGATTACATCCATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR TCA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTAGGACCGTCTGGTAGCTaGTCCCGGAACGCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLGPSGS*SRNAAG Trigger: GCCAGCTGCGTTCCGGGATCAGCTACCAGACGGTCC...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR TCA 90 bp | AGATCTTATAAGGCCTGTCCTCTTTGGTTGAGCCATCTTTTACTTTACCTATTAGGACCGTCTGGTAGCTaGTCCCGGAACGCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RSYKACPLWLSHLLLYLLGPSGS*SRNAAG Trigger: GCCAGCTGCGTTCCGGGATCAGCTACCAGACGGTCC...TAATAGGTAAAGTAAAAGATGGCTCAACCAAAGAGGACAGGCCTTATAAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| 3UTR CAA 72 bp | GTAATCCCAATAGTTTGGGACACTGAAGTGGATCGCTaGAACCCGAGAATTCAAGACCAGCCTGGGCAACAT | + |
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Preference number: 4 (lower is better) Translates to: VIPIVWDTEVDR*NPRIQDQPGQH Trigger: ATGTTGCCCAGGCTGGTCTTGAATTCTCGGGTTCAAGCGATCCACTTCAGTGTCCCAAACTATTGGGATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR GCA 90 bp | ATGTTTCTCAGCCTCCCTTGGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTCAACCTCCATATGGAATaGTTGTATCCAGACTTAACC | + |
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Preference number: 4 (lower is better) Translates to: MFLSLPWRQVSGSGECNFNLHME*LYPDLT Trigger: GGTTAAGTCTGGATACAAGCATTCCATATGGAGGTT...GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR TCA 90 bp | ATGTTTCTCAGCCTCCCTTGGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTCCCCTGTCACAGTTCTTaGCAAAGTAATATAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: MFLSLPWRQVSGSGECNFPCHSS*QSNINP Trigger: AGGATTTATATTACTTTGTCAAGAACTGTGACAGGG...GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR GCA 90 bp | GCAATTCTATTCCTAGGTATACATGCAAAGAAACTTTCTTGTATACCAGGAGATCCAGGAGGCGGAGGTTaGAGTGAGCCGAGATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: AILFLGIHAKKLSCIPGDPGGGG*SEPRWC Trigger: GCACCATCTCGGCTCACTGCAACCTCCGCCTCCTGG...ATCTCCTGGTATACAAGAAAGTTTCTTTGCATGTATACCTAGGAATAGAATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | TTAGGGAACTGGTACCAAATATGTCAAAACTCATGCTGCTTGTTGTTTTGTGAGTTCGGGAAGGCGTTGTaGGAAAAGTGGGCGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGNWYQICQNSCCLLFCEFGKAL*EKWAEV Trigger: CACCTCCGCCCACTTTTCCCACAACGCCTTCCCGAA...CTCACAAAACAACAAGCAGCATGAGTTTTGACATATTTGGTACCAGTTCCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTAATCCCGGAACGCAGCTaGCCAACGGATAAGTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLIPERS*PTDKCG Trigger: CCCGCACTTATCCGTTGGCCAGCTGCGTTCCGGGAT...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | TTAGGGAACTGGTACCAAATATGTCAAAACTCATGCTGCTTGTTGTTTTGTGAGCCTGAGGTCAGGAGTTaGAGACTAGCCTGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LGNWYQICQNSCCLLFCEPEVRS*RLAWPA Trigger: TGCTGGCCAGGCTAGTCTCCAACTCCTGACCTCAGG...CTCACAAAACAACAAGCAGCATGAGTTTTGACATATTTGGTACCAGTTCCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | ATGTTTCTCAGCCTCCCTTGGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTCACAATGCCAAGTGTTTaGAGAGGATATAATTCCACA | + |
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Preference number: 4 (lower is better) Translates to: MFLSLPWRQVSGSGECNFTMPSV*RGYNST Trigger: TGTGGAATTATATCCTCTCCAAACACTTGGCATTGT...GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | TCTTTGGTTGAGCCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCTTCGGGAAGGCGTTGTaGGAAAAGTGGGCGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLVEPSFTLPIKLGCSSFFGKAL*EKWAEV Trigger: CACCTCCGCCCACTTTTCCCACAACGCCTTCCCGAA...GAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGGCTCAACCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS-3UTR CCA 90 bp | TGTATCTCTTGTCAACATCCAGGAAACTGTAGCAAGCTAACTTATGAGTTTGCAGGCCCTCAGCGAGTTTaGATCCAGGAGCCTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: CISCQHPGNCSKLTYEFAGPQRV*IQEPFQ Trigger: TTGGAAAGGCTCCTGGATCCAAACTCGCTGAGGGCC...TGCAAACTCATAAGTTAGCTTGCTACAGTTTCCTGGATGTTGACAAGAGATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR GCA 90 bp | GAGCCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCACAAGGACTAAAAGTGGGCGGAGGTaGCAATCGATCCTCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: EPSFTLPIKLGCSSFTRTKSGRR*QSILQS Trigger: AGACTGGAGGATCGATTGGCACCTCCGCCCACTTTT...AGTCCTTGTGAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS-3UTR CCA 90 bp | AGATCTTATAAGGCCTGTCCTCTTTGGTTGAGCCATCTTTTACTTTACCTATTAGCGTTGTGGGAAAAGTaGGCGGAGGTGCCAATCGAT | + |
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Preference number: 4 (lower is better) Translates to: RSYKACPLWLSHLLLYLLALWEK*AEVPID Trigger: ATCGATTGGCACCTCCGCCCACTTTTCCCACAACGC...TAATAGGTAAAGTAAAAGATGGCTCAACCAAAGAGGACAGGCCTTATAAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS-3UTR GCA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTAAAAAGTGGGCGGAGGTaGCAATCGATCCTCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLKSGRR*QSILQS Trigger: AGACTGGAGGATCGATTGGCACCTCCGCCCACTTTT...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | GCAATTCTATTCCTAGGTATACATGCAAAGAAACTTTCTTGTATACCAGGAGATGCGTTGTGGGAAAAGTaGGCGGAGGTGCCAATCGAT | + |
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Preference number: 4 (lower is better) Translates to: AILFLGIHAKKLSCIPGDALWEK*AEVPID Trigger: ATCGATTGGCACCTCCGCCCACTTTTCCCACAACGC...ATCTCCTGGTATACAAGAAAGTTTCTTTGCATGTATACCTAGGAATAGAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | TCTTTGGTTGAGCCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCTGCCTCCACATCTCCTaGGTAGAAGTCACAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLVEPSFTLPIKLGCSSFCLHIS*VEVTAP Trigger: AGGAGCTGTGACTTCTACCCAGGAGATGTGGAGGCA...GAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGGCTCAACCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS-3UTR TCA 90 bp | GCAATTCTATTCCTAGGTATACATGCAAAGAAACTTTCTTGTATACCAGGAGATGCACTTCAGCTTGGGTaGCAGAGAAGCTGTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: AILFLGIHAKKLSCIPGDALQLG*QRSCLS Trigger: AGACAGACAGCTTCTCTGTCACCCAAGCTGAAGTGC...ATCTCCTGGTATACAAGAAAGTTTCTTTGCATGTATACCTAGGAATAGAATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR GCA 90 bp | TGTATCTCTTGTCAACATCCAGGAAACTGTAGCAAGCTAACTTATGAGTTTGCATTGAGGACATTTTCTTaGCTGGCCCTCAGCGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: CISCQHPGNCSKLTYEFALRTFS*LALSEF Trigger: AAACTCGCTGAGGGCCAGGCAAGAAAATGTCCTCAA...TGCAAACTCATAAGTTAGCTTGCTACAGTTTCCTGGATGTTGACAAGAGATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | AGATCTTATAAGGCCTGTCCTCTTTGGTTGAGCCATCTTTTACTTTACCTATTAGGACATTTTCTTGCCTaGCCCTCAGCGAGTTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: RSYKACPLWLSHLLLYLLGHFLA*PSASLD Trigger: ATCCAAACTCGCTGAGGGCCAGGCAAGAAAATGTCC...TAATAGGTAAAGTAAAAGATGGCTCAACCAAAGAGGACAGGCCTTATAAGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS-3UTR GCA 90 bp | TTGGTTGAGCCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCACATTGAGGACATTTTCTTaGCTGGCCCTCAGCGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LVEPSFTLPIKLGCSSFTLRTFS*LALSEF Trigger: AAACTCGCTGAGGGCCAGGCAAGAAAATGTCCTCAA...TGTGAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGGCTCAACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS-3UTR CCA 90 bp | CCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCACAAGGACTCAAAAGGCCTGTCCTCTTTaGTTGAGCCATCTTTTACTT | + |
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Preference number: 4 (lower is better) Translates to: PSFTLPIKLGCSSFTRTQKACPL*LSHLLL Trigger: AAGTAAAAGATGGCTCAACCAAAGAGGACAGGCCTT...TTGAGTCCTTGTGAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS-3UTR TCA 90 bp | TTAGGGAACTGGTACCAAATATGTCAAAACTCATGCTGCTTGTTGTTTTGTGAGTTAGTAGCAATAAGCTaGAAACAACCCAAATACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGNWYQICQNSCCLLFCELVAIS*KQPKYP Trigger: TGGGTATTTGGGTTGTTTTCAGCTTATTGCTACTAA...CTCACAAAACAACAAGCAGCATGAGTTTTGACATATTTGGTACCAGTTCCCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR GCA 90 bp | TTGGTTGAGCCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCACAAGGCCATGTTTAGTTTaGTTTAACAGTAGAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVEPSFTLPIKLGCSSFTRPCLV*FNSRMQ Trigger: CTGCATTCTACTGTTAAAGCAAACTAAACATGGCCT...TGTGAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGGCTCAACCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546803.5 |
||
| CDS-3UTR GCA 90 bp | TGTATCTCTTGTCAACATCCAGGAAACTGTAGCAAGCTAACTTATGAGTTTGCAATATGTCAAAACTCATaGTGCTTGTTGTTTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CISCQHPGNCSKLTYEFAICQNS*CLLFCE Trigger: CTCACAAAACAACAAGCAGCATGAGTTTTGACATAT...TGCAAACTCATAAGTTAGCTTGCTACAGTTTCCTGGATGTTGACAAGAGATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | GCAATTCTATTCCTAGGTATACATGCAAAGAAACTTTCTTGTATACCAGGAGATTGGGTCTTAGGGAACTaGTACCAAATATGTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AILFLGIHAKKLSCIPGDWVLGN*YQICQN Trigger: GTTTTGACATATTTGGTACCAGTTCCCTAAGACCCA...ATCTCCTGGTATACAAGAAAGTTTCTTTGCATGTATACCTAGGAATAGAATTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CCA 90 bp | CCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCACAAGGACTCAATCAAATATAGAAGTATaGAGTATGGAGTCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSFTLPIKLGCSSFTRTQSNIEV*SMESFS Trigger: TGAGAAGGACTCCATACTCCATACTTCTATATTTGA...TTGAGTCCTTGTGAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS TCA 90 bp | CTCCCCCAGCCCGGTTCCCGGTCATCTCAGGGACCGTCTGGTAGCTaGTCCCGGAACGCAGCTGGCCAACGGATAAGTGCGGGGCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPQPGSRSSQGPSGS*SRNAAGQRISAGHP Trigger: CGGGTGCCCCGCACTTATCCGTTGGCCAGCTGCGTTCCGGGATCAGCTACCAGACGGTCCCTGAGATGACCGGGAACCGGGCTGGGGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS CCA 90 bp | AGGAGCCTTTCCAACCTATCGTTCGGGAAGGCGTTGTGGGAAAAGTaGGCGGAGGTGCCAATCGATCCTCCAGTCTCGGCTCTATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSLSNLSFGKALWEK*AEVPIDPPVSALSS Trigger: GGAGGATAGAGCCGAGACTGGAGGATCGATTGGCACCTCCGCCCACTTTTCCCACAACGCCTTCCCGAACGATAGGTTGGAAAGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000344280.8 ENST00000546386.1 ENST00000546803.5 ENST00000546947.5 ENST00000549752.1 |
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| CDS CCA 90 bp | TTTGGATCCAGGAGCCTTTCCAACCTATCGTTCGGGAAGGCGTTGTaGGAAAAGTGGGCGGAGGTGCCAATCGATCCTCCAGTCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FGSRSLSNLSFGKAL*EKWAEVPIDPPVSA Trigger: AGCCGAGACTGGAGGATCGATTGGCACCTCCGCCCACTTTTCCCACAACGCCTTCCCGAACGATAGGTTGGAAAGGCTCCTGGATCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000344280.8 ENST00000546386.1 ENST00000546803.5 ENST00000546947.5 ENST00000549752.1 |
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| CDS-3UTR CAA 90 bp | ATGTTTCTCAGCCTCCCTTGGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTCTGGCCCTCAGCGAGTTaGGATCCAGGAGCCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MFLSLPWRQVSGSGECNFWPSAS*DPGAFP Trigger: TGGAAAGGCTCCTGGATCCAAACTCGCTGAGGGCCA...GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS TCA 90 bp | AGGTCACACAGTTCTACCAGGCGAGATTCTACTTTTACCAGCTTTTaGATTGGGTTGAGGCCGTCATCCTCAGCATCTCCAATGCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RSHSSTRRDSTFTSF*IGLRPSSSASPMQT Trigger: AGTCTGCATTGGAGATGCTGAGGATGACGGCCTCAACCCAATTCAAAAGCTGGTAAAAGTAGAATCTCGCCTGGTAGAACTGTGTGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344280.8 |
||
| CDS-3UTR CAA 90 bp | GCAATTCTATTCCTAGGTATACATGCAAAGAAACTTTCTTGTATACCAGGAGATTGTAGTCCCAGCACTTaGGGAGACCGAGGCGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AILFLGIHAKKLSCIPGDCSPST*GDRGGR Trigger: CCGCCCGCCTCGGTCTCCCAAAGTGCTGGGACTACA...ATCTCCTGGTATACAAGAAAGTTTCTTTGCATGTATACCTAGGAATAGAATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
||
| CDS-3UTR CAA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTATCGTTCGGGAAGGCGTaGTGGGAAAAGTGGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLSFGKA*WEKWAE Trigger: CTCCGCCCACTTTTCCCACAACGCCTTCCCGAACGA...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546386.1 |
||
| CDS-3UTR CAA 90 bp | TTGGTTGAGCCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCACATCGTTCGGGAAGGCGTaGTGGGAAAAGTGGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVEPSFTLPIKLGCSSFTSFGKA*WEKWAE Trigger: CTCCGCCCACTTTTCCCACAACGCCTTCCCGAACGA...TGTGAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGGCTCAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546803.5 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCTCAGCCTCCCTTGGAGGCAGGTCAGCGGAAGTGGTGAATGCAACTTCACTGGGAGAAAATATTaGTACTCCATAGAGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: MFLSLPWRQVSGSGECNFTGRKY*YSIEMT Trigger: TGTCATCTCTATGGAGTACAAATATTTTCTCCCAGT...GAAGTTGCATTCACCACTTCCGCTGACCTGCCTCCAAGGGAGGCTGAGAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS CCA 90 bp | ACACAGTTCTACCAGGCGAGATTCTACTTTTACCAGCTTTTGAATTaGGTTGAGGCCGTCATCCTCAGCATCTCCAATGCAGACTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TQFYQARFYFYQLLN*VEAVILSISNADFV Trigger: TACAAAGTCTGCATTGGAGATGCTGAGGATGACGGCCTCAACCCAATTCAAAAGCTGGTAAAAGTAGAATCTCGCCTGGTAGAACTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344280.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTGGTTGAGCCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCTGGCCCTCAGCGAGTTaGGATCCAGGAGCCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLVEPSFTLPIKLGCSSFWPSAS*DPGAFP Trigger: TGGAAAGGCTCCTGGATCCAAACTCGCTGAGGGCCA...GAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGGCTCAACCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546803.5 |
||
| CDS TCA 90 bp | GTTCTACCAGGCGAGATTCTACTTTTACCAGCTTTTGAATTGGGTTaGGGCCGTCATCCTCAGCATCTCCAATGCAGACTTTGTATACTT | + |
|
Preference number: 5 (lower is better) Translates to: VLPGEILLLPAFELG*GRHPQHLQCRLCIL Trigger: AAGTATACAAAGTCTGCATTGGAGATGCTGAGGATGACGGCCTCAACCCAATTCAAAAGCTGGTAAAAGTAGAATCTCGCCTGGTAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344280.8 |
||
| CDS GCA 90 bp | CGTATCACCAGTTGGAAGATTGATGGGAGACCTTCATTCTACTGCTaGCTCCGTTTTAGATTGAAATCCTCCCAGATATGCTTTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RITSWKIDGRPSFYC*LRFRLKSSQICFSL Trigger: CAGTGAAAAGCATATCTGGGAGGATTTCAATCTAAAACGGAGGCAGCAGTAGAATGAAGGTCTCCCATCAATCTTCCAACTGGTGATACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548771.1 |
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| CDS CCA 90 bp | GGCCAGAGTGATGAAACAAACATTTTCAGAGCGTCTACAGATCTCTaGTCATTTTCTCGAAGGAACTCTTCAAAGGCCAGTGCATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GQSDETNIFRASTDL*SFSRRNSSKASASS Trigger: AGATGATGCACTGGCCTTTGAAGAGTTCCTTCGAGAAAATGACCAGAGATCTGTAGACGCTCTGAAAATGTTTGTTTCATCACTCTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548771.1 |
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| CDS GCA 90 bp | TATAGAAGTATGGAGTATGGAGTCCTTCTCAGGCCATGTTTAGTTTaGTTTAACAGTAGAATGCAGATAGCCTTGCCTCCACATCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YRSMEYGVLLRPCLV*FNSRMQIALPPHLL Trigger: CAGGAGATGTGGAGGCAAGGCTATCTGCATTCTACTGTTAAAGCAAACTAAACATGGCCTGAGAAGGACTCCATACTCCATACTTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546803.5 ENST00000549752.1 |
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| CDS GCA 90 bp | TCACGTATCACCAGTTGGAAGATTGATGGGAGACCTTCATTCTACTaGTGCCTCCGTTTTAGATTGAAATCCTCCCAGATATGCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRITSWKIDGRPSFY*CLRFRLKSSQICFS Trigger: TGAAAAGCATATCTGGGAGGATTTCAATCTAAAACGGAGGCAGCAGTAGAATGAAGGTCTCCCATCAATCTTCCAACTGGTGATACGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548771.1 |
||
| CDS-3UTR CAA 90 bp | TTAGGGAACTGGTACCAAATATGTCAAAACTCATGCTGCTTGTTGTTTTGTGAGTTTGAGGACATTTTCTaGCCTGGCCCTCAGCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGNWYQICQNSCCLLFCEFEDIF*PGPQRV Trigger: AACTCGCTGAGGGCCAGGCAAGAAAATGTCCTCAAA...CTCACAAAACAACAAGCAGCATGAGTTTTGACATATTTGGTACCAGTTCCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CAA 90 bp | CCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCACAAGGACTCAAAGAATGCAGATAGCCTaGCCTCCACATCTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSFTLPIKLGCSSFTRTQRMQIA*PPHLLG Trigger: ACCCAGGAGATGTGGAGGCAAGGCTATCTGCATTCT...TTGAGTCCTTGTGAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS GCA 90 bp | AAGCATCTTCTGAAAGGACAGCTGTCCTCCCGGACTCCTCAAGGATaGCTTCCTTGTTACTTGAATGTAATGATAATTTTGCTAATATTT | + |
|
Preference number: 5 (lower is better) Translates to: KHLLKGQLSSRTPQG*LPCYLNVMIILLIF Trigger: AAATATTAGCAAAATTATCATTACATTCAAGTAACAAGGAAGGCATCCTTGAGGAGTCCGGGAGGACAGCTGTCCTTTCAGAAGATGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344280.8 |
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| CDS CCA 90 bp | GCATACTCGAGCAGAAACCTGTCTCTCTGGTCATTAATAAATTCATaGACAGTCCTTTTTGTGTCGGAACCTTCTATTAATCTAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: AYSSRNLSLWSLINS*TVLFVSEPSINLGI Trigger: GATTCCTAGATTAATAGAAGGTTCCGACACAAAAAGGACTGTCCATGAATTTATTAATGACCAGAGAGACAGGTTTCTGCTCGAGTATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344280.8 |
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| CDS-3UTR CAA 90 bp | CCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTTCGTTCACAAGGACTCAAGCCTGTCCTCTTTGGTaGAGCCATCTTTTACTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PSFTLPIKLGCSSFTRTQACPLW*SHLLLY Trigger: GTAAAGTAAAAGATGGCTCAACCAAAGAGGACAGGC...TTGAGTCCTTGTGAACGAACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS-3UTR CAA 90 bp | TGTATCTCTTGTCAACATCCAGGAAACTGTAGCAAGCTAACTTATGAGTTTGCAGTGTTGGCAATAAATTaGAGGACATTTTCTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CISCQHPGNCSKLTYEFAVLAIN*RTFSCL Trigger: CAGGCAAGAAAATGTCCTCAAATTTATTGCCAACAC...TGCAAACTCATAAGTTAGCTTGCTACAGTTTCCTGGATGTTGACAAGAGATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CAA 90 bp | CTGTCCTCTTTGGTTGAGCCATCTTTTACTTTACCTATTAAGTTAGGTTGCAGTGTGTTGGCAATAAATTaGAGGACATTTTCTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSLVEPSFTLPIKLGCSVLAIN*RTFSCL Trigger: CAGGCAAGAAAATGTCCTCAAATTTATTGCCAACAC...ACTGCAACCTAACTTAATAGGTAAAGTAAAAGATGGCTCAACCAAAGAGGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS-3UTR CAA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTATCTGACCCAAGAGTTTaGTATCTCTTGTCAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLSDPRV*YLLSTS Trigger: GGATGTTGACAAGAGATACAAAACTCTTGGGTCAGA...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS GCA 90 bp | TTCTGTTTTTGCTATTTCACTTTTCACTGCTTGTACCTCCATGCTTaGTTTCTTCAGCTCTGCTGTCATTTGGAGTTTGTTTATTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FCFCYFTFHCLYLHA*FLQLCCHLEFVYCF Trigger: GAAACAATAAACAAACTCCAAATGACAGCAGAGCTGAAGAAAGCAAGCATGGAGGTACAAGCAGTGAAAAGTGAAATAGCAAAAACAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344280.8 |
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| CDS-3UTR CAA 90 bp | AGATCTTATAAGGCCTGTCCTCTTTGGTTGAGCCATCTTTTACTTTACCTATTACTCCAGAATTCAGTGTaGGCAATAAATTTGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RSYKACPLWLSHLLLYLLLQNSV*AINLRT Trigger: TGTCCTCAAATTTATTGCCAACACTGAATTCTGGAG...TAATAGGTAAAGTAAAAGATGGCTCAACCAAAGAGGACAGGCCTTATAAGATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546803.5 |
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| CDS-3UTR CAA 90 bp | GCAATTCTATTCCTAGGTATACATGCAAAGAAACTTTCTTGTATACCAGGAGATCTCCAGAATTCAGTGTaGGCAATAAATTTGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: AILFLGIHAKKLSCIPGDLQNSV*AINLRT Trigger: TGTCCTCAAATTTATTGCCAACACTGAATTCTGGAG...ATCTCCTGGTATACAAGAAAGTTTCTTTGCATGTATACCTAGGAATAGAATTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS-3UTR CAA 90 bp | AAAAACTTGACAATGCCAAGTGTTTGGAGAGGATATAATTCCACAGGATCTCTATGCAAAGAAACTTTCTaGTATACCAGGAGATGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KNLTMPSVWRGYNSTGSLCKETF*YTRRCE Trigger: TTCACATCTCCTGGTATACAAGAAAGTTTCTTTGCA...TAGAGATCCTGTGGAATTATATCCTCTCCAAACACTTGGCATTGTCAAGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS TCA 72 bp | CCCGGTTCCCGGTCATCTCAGGGACCGTCTGGTAGCTaGTCCCGGAACGCAGCTGGCCAACGGATAAGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PGSRSSQGPSGS*SRNAAGQRISA Trigger: CGCACTTATCCGTTGGCCAGCTGCGTTCCGGGATCAGCTACCAGACGGTCCCTGAGATGACCGGGAACCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS GCA 72 bp | CGTTCGGGAAGGCGTTGTGGGAAAAGTGGGCGGAGGTaGCAATCGATCCTCCAGTCTCGGCTCTATCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RSGRRCGKSGRR*QSILQSRLYPP Trigger: GGGAGGATAGAGCCGAGACTGGAGGATCGATTGGCACCTCCGCCCACTTTTCCCACAACGCCTTCCCGAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000344280.8 ENST00000546386.1 ENST00000546803.5 ENST00000546947.5 ENST00000549752.1 |
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| CDS CCA 72 bp | TCCAACCTATCGTTCGGGAAGGCGTTGTGGGAAAAGTaGGCGGAGGTGCCAATCGATCCTCCAGTCTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SNLSFGKALWEK*AEVPIDPPVSA Trigger: AGCCGAGACTGGAGGATCGATTGGCACCTCCGCCCACTTTTCCCACAACGCCTTCCCGAACGATAGGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000344280.8 ENST00000546386.1 ENST00000546803.5 ENST00000546947.5 ENST00000549752.1 |
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| CDS CAA 90 bp | GAGTTTGGATCCAGGAGCCTTTCCAACCTATCGTTCGGGAAGGCGTaGTGGGAAAAGTGGGCGGAGGTGCCAATCGATCCTCCAGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: EFGSRSLSNLSFGKA*WEKWAEVPIDPPVS Trigger: CGAGACTGGAGGATCGATTGGCACCTCCGCCCACTTTTCCCACAACGCCTTCCCGAACGATAGGTTGGAAAGGCTCCTGGATCCAAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000344280.8 ENST00000546386.1 ENST00000546803.5 ENST00000546947.5 ENST00000549752.1 |
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| CDS CCA 72 bp | AGGAGCCTTTCCAACCTATCGTTCGGGAAGGCGTTGTaGGAAAAGTGGGCGGAGGTGCCAATCGATCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSLSNLSFGKAL*EKWAEVPIDPP Trigger: TGGAGGATCGATTGGCACCTCCGCCCACTTTTCCCACAACGCCTTCCCGAACGATAGGTTGGAAAGGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000344280.8 ENST00000546386.1 ENST00000546803.5 ENST00000546947.5 ENST00000549752.1 |
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| CDS CAA 72 bp | TCCAGGAGCCTTTCCAACCTATCGTTCGGGAAGGCGTaGTGGGAAAAGTGGGCGGAGGTGCCAATCGATCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSLSNLSFGKA*WEKWAEVPIDP Trigger: AGGATCGATTGGCACCTCCGCCCACTTTTCCCACAACGCCTTCCCGAACGATAGGTTGGAAAGGCTCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000344280.8 ENST00000546386.1 ENST00000546803.5 ENST00000546947.5 ENST00000549752.1 |
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| CDS CAA 90 bp | GAGGTCACACAGTTCTACCAGGCGAGATTCTACTTTTACCAGCTTTaGAATTGGGTTGAGGCCGTCATCCTCAGCATCTCCAATGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: EVTQFYQARFYFYQL*NWVEAVILSISNAD Trigger: GTCTGCATTGGAGATGCTGAGGATGACGGCCTCAACCCAATTCAAAAGCTGGTAAAAGTAGAATCTCGCCTGGTAGAACTGTGTGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344280.8 |
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| CDS CAA 90 bp | CTCAGGCCATGTTTAGTTTGCTTTAACAGTAGAATGCAGATAGCCTaGCCTCCACATCTCCTGGGTAGAAGTCACAGCTCCTCTGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRPCLVCFNSRMQIA*PPHLLGRSHSSSVC Trigger: ACAGACAGAGGAGCTGTGACTTCTACCCAGGAGATGTGGAGGCAAGGCTATCTGCATTCTACTGTTAAAGCAAACTAAACATGGCCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546803.5 ENST00000549752.1 |
||
| CDS TCA 72 bp | GGCGAGATTCTACTTTTACCAGCTTTTGAATTGGGTTaGGGCCGTCATCCTCAGCATCTCCAATGCAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: GEILLLPAFELG*GRHPQHLQCRL Trigger: AAGTCTGCATTGGAGATGCTGAGGATGACGGCCTCAACCCAATTCAAAAGCTGGTAAAAGTAGAATCTCGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344280.8 |
||
| CDS TCA 72 bp | AGTTCTACCAGGCGAGATTCTACTTTTACCAGCTTTTaGATTGGGTTGAGGCCGTCATCCTCAGCATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSTRRDSTFTSF*IGLRPSSSASP Trigger: TGGAGATGCTGAGGATGACGGCCTCAACCCAATTCAAAAGCTGGTAAAAGTAGAATCTCGCCTGGTAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344280.8 |
||
| CDS TCA 72 bp | GTAAATGGCTGCTTCACGTATCACCAGTTGGAAGATTaGTGGGAGACCTTCATTCTACTGCTGCCTCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VNGCFTYHQLED*WETFILLLPPF Trigger: AAACGGAGGCAGCAGTAGAATGAAGGTCTCCCATCAATCTTCCAACTGGTGATACGTGAAGCAGCCATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548771.1 |
||
| CDS CCA 72 bp | TCCTGTGCTGCCATTTTCAGAGCGTCTACAGATCTCTaGTCATTTTCTCGAAGGAACTCTTCAAAGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SCAAIFRASTDL*SFSRRNSSKAS Trigger: ACTGGCCTTTGAAGAGTTCCTTCGAGAAAATGACCAGAGATCTGTAGACGCTCTGAAAATGGCAGCACAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344280.8 |
||
| CDS CCA 72 bp | TACCAGGCGAGATTCTACTTTTACCAGCTTTTGAATTaGGTTGAGGCCGTCATCCTCAGCATCTCCAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: YQARFYFYQLLN*VEAVILSISNA Trigger: TGCATTGGAGATGCTGAGGATGACGGCCTCAACCCAATTCAAAAGCTGGTAAAAGTAGAATCTCGCCTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344280.8 |
||
| CDS CAA 72 bp | AGTAAATGGCTGCTTCACGTATCACCAGTTGGAAGATaGATGGGAGACCTTCATTCTACTGCTGCCTCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SKWLLHVSPVGR*MGDLHSTAASV Trigger: AACGGAGGCAGCAGTAGAATGAAGGTCTCCCATCAATCTTCCAACTGGTGATACGTGAAGCAGCCATTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548771.1 |
||
| CDS CAA 72 bp | AGTTGGGCCCCTGATGTGAACCTCCATATGGAATGCTaGTATCCAGACTTAACCTCCAGAATTCAGTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SWAPDVNLHMEC*YPDLTSRIQCW Trigger: CCAACACTGAATTCTGGAGGTTAAGTCTGGATACAAGCATTCCATATGGAGGTTCACATCAGGGGCCCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS TCA 72 bp | CATTTTCTCATCACGAAACCAGCTTTTGAATTGGGTTaGGGCCGTCATCCTCAGCATCTCCAATGCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: HFLITKPAFELG*GRHPQHLQCRL Trigger: AAGTCTGCATTGGAGATGCTGAGGATGACGGCCTCAACCCAATTCAAAAGCTGGTTTCGTGATGAGAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549876.5 |
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| CDS CAA 90 bp | CCATATGGAATGCTTGTATCCAGACTTAACCTCCAGAATTCAGTGTaGGCAATAAATTTGAGGACATTTTCTTGCCTGGCCCTCAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: PYGMLVSRLNLQNSV*AINLRTFSCLALSE Trigger: CTCGCTGAGGGCCAGGCAAGAAAATGTCCTCAAATTTATTGCCAACACTGAATTCTGGAGGTTAAGTCTGGATACAAGCATTCCATATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS TCA 72 bp | GGAGACCTTCATTCTACTGCTGCCTCCGTTTTAGATTaGAATCCTCCCAGATATGCTTTTCACTGCTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: GDLHSTAASVLD*NPPRYAFHCLY Trigger: GTACAAGCAGTGAAAAGCATATCTGGGAGGATTTCAATCTAAAACGGAGGCAGCAGTAGAATGAAGGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548771.1 |
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| CDS GCA 72 bp | CTGAAAGGACAGCTGTCCTCCCGGACTCCTCAAGGATaGCTTCCTTGTTACTTGAATGTAATGATAATTTTG | + |
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Preference number: 6 (lower is better) Translates to: LKGQLSSRTPQG*LPCYLNVMIIL Trigger: CAAAATTATCATTACATTCAAGTAACAAGGAAGGCATCCTTGAGGAGTCCGGGAGGACAGCTGTCCTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344280.8 |
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| CDS GCA 72 bp | AGTTGGAAGATTGATGGGAGACCTTCATTCTACTGCTaGCTCCGTTTTAGATTGAAATCCTCCCAGATATGC | + |
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Preference number: 6 (lower is better) Translates to: SWKIDGRPSFYC*LRFRLKSSQIC Trigger: GCATATCTGGGAGGATTTCAATCTAAAACGGAGGCAGCAGTAGAATGAAGGTCTCCCATCAATCTTCCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548771.1 |
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| CDS GCA 72 bp | ACCAGTTGGAAGATTGATGGGAGACCTTCATTCTACTaGTGCCTCCGTTTTAGATTGAAATCCTCCCAGATA | + |
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Preference number: 6 (lower is better) Translates to: TSWKIDGRPSFY*CLRFRLKSSQI Trigger: TATCTGGGAGGATTTCAATCTAAAACGGAGGCAGCAGTAGAATGAAGGTCTCCCATCAATCTTCCAACTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548771.1 |
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| CDS CAA 72 bp | GGGAGACCTTCATTCTACTGCTGCCTCCGTTTTAGATaGAAATCCTCCCAGATATGCTTTTCACTGCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: GRPSFYCCLRFR*KSSQICFSLLV Trigger: TACAAGCAGTGAAAAGCATATCTGGGAGGATTTCAATCTAAAACGGAGGCAGCAGTAGAATGAAGGTCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548771.1 |
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| CDS CCA 72 bp | GATGAAACAAACATTTTCAGAGCGTCTACAGATCTCTaGTCATTTTCTCGAAGGAACTCTTCAAAGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: DETNIFRASTDL*SFSRRNSSKAS Trigger: ACTGGCCTTTGAAGAGTTCCTTCGAGAAAATGACCAGAGATCTGTAGACGCTCTGAAAATGTTTGTTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548771.1 |
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| CDS CAA 72 bp | ATGCTTGTATCCAGACTTAACCTCCAGAATTCAGTGTaGGCAATAAATTTGAGGACATTTTCTTGCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: MLVSRLNLQNSV*AINLRTFSCLA Trigger: GGCCAGGCAAGAAAATGTCCTCAAATTTATTGCCAACACTGAATTCTGGAGGTTAAGTCTGGATACAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546386.1 |
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| CDS CAA 90 bp | TTGAAATCCTCCCAGATATGCTTTTCACTGCTTGTACCTCCATGCTaGCTTTCTTCAGCTCTGCTGTCATTTGGAGTTTGTTTATTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LKSSQICFSLLVPPC*LSSALLSFGVCLLF Trigger: AAACAATAAACAAACTCCAAATGACAGCAGAGCTGAAGAAAGCAAGCATGGAGGTACAAGCAGTGAAAAGCATATCTGGGAGGATTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548771.1 |
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| CDS CAA 72 bp | TTGAGCCATCTTTTACTTTACCTCCAGAATTCAGTGTaGGCAATAAATTTGAGGACATTTTCTTGCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSHLLLYLQNSV*AINLRTFSCLA Trigger: GGCCAGGCAAGAAAATGTCCTCAAATTTATTGCCAACACTGAATTCTGGAGGTAAAGTAAAAGATGGCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344280.8 |
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| CDS CAA 72 bp | ACAGCTGTCCTCCCGGACTCCTCAAGGATGCCTTCCTaGTTACTTGAATGTAATGATAATTTTGCTAATATT | + |
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Preference number: 6 (lower is better) Translates to: TAVLPDSSRMPS*LLECNDNFANI Trigger: AATATTAGCAAAATTATCATTACATTCAAGTAACAAGGAAGGCATCCTTGAGGAGTCCGGGAGGACAGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344280.8 |
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| CDS CAA 90 bp | ATTCTGTTTTTGCTATTTCACTTTTCACTGCTTGTACCTCCATGCTaGCTTTCTTCAGCTCTGCTGTCATTTGGAGTTTGTTTATTGTTT | + |
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Preference number: 6 (lower is better) Translates to: ILFLLFHFSLLVPPC*LSSALLSFGVCLLF Trigger: AAACAATAAACAAACTCCAAATGACAGCAGAGCTGAAGAAAGCAAGCATGGAGGTACAAGCAGTGAAAAGTGAAATAGCAAAAACAGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344280.8 |
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| CDS TCA 72 bp | TCATCCTCAGCATCTCCAATGCAGACTTTGTATACTTaGGTAATCTTTTTACTAAGTGAGTCTATCAGTATT | + |
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Preference number: 6 (lower is better) Translates to: SSSASPMQTLYT*VIFLLSESISI Trigger: AATACTGATAGACTCACTTAGTAAAAAGATTACTCAAGTATACAAAGTCTGCATTGGAGATGCTGAGGATGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000344280.8 ENST00000549876.5 |
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