RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC30 (Homo sapiens)

Ensembl gene IDs: ENSG00000186409

Ensembl transcript IDs: ENST00000340612.6, ENST00000342022.8, ENST00000428554.6, ENST00000462063.1, ENST00000468651.2, ENST00000471390.6, ENST00000475614.7, ENST00000477155.6, ENST00000492422.1, ENST00000495044.6, ENST00000507855.5, ENST00000509712.6, ENST00000514642.1, ENST00000653544.1, ENST00000654604.1, ENST00000654683.1, ENST00000655164.1, ENST00000655265.1, ENST00000655447.1, ENST00000655845.1, ENST00000656470.1, ENST00000657597.1, ENST00000658812.1, ENST00000660083.1, ENST00000660830.1, ENST00000660938.1, ENST00000661864.1, ENST00000663155.1, ENST00000663866.1, ENST00000664192.1, ENST00000664418.1, ENST00000664805.1, ENST00000665176.1, ENST00000665792.1, ENST00000665812.1, ENST00000666893.1, ENST00000667205.1, ENST00000667947.1, ENST00000668036.1, ENST00000668663.1, ENST00000669138.1, ENST00000669471.1, ENST00000670292.1, ENST00000670783.1, ENST00000670982.1, ENST00000671281.1, ENST00000671538.1

Found 2329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTGGGTAGCTCTTCTCCTGTGGCTTTGCAGGCAGCAGCCCCTGTaGCTGATCTCACTGGTTGGAGCTGGGTGTCTGAGGCTTTCCCAG +
Preference number: 1 (lower is better)
Translates to: PWVALLLWLCRQQPL*LISLVGAGCLRLSQ
Trigger: CTGGGAAAGCCTCAGACACCCAGCTCCAACCAGTGAGATCAGCCACAGGGGCTGCTGCCTGCAAAGCCACAGGAGAAGAGCTACCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 90 bp GTTGGAGCTGGGTGTCTGAGGCTTTCCCAGGTACAGGATGCAAGCTaGCTGTGGATCTACCATTCTGGAGTCTGGAGGGCAGTGGCCCAC +
Preference number: 1 (lower is better)
Translates to: VGAGCLRLSQVQDAS*LWIYHSGVWRAVAH
Trigger: GTGGGCCACTGCCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCATCCTGTACCTGGGAAAGCCTCAGACACCCAGCTCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 90 bp TGGACAGGCAGCCTGAGCTGTATCTGGGGTCCTTTGAGCCACAGCTaGAGCTGTAGTAGCTGGGATTCAGGGAGCAGTGTCCTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: WTGSLSCIWGPLSHS*SCSSWDSGSSVLRL
Trigger: CAGCCTCAGGACACTGCTCCCTGAATCCCAGCTACTACAGCTCCAGCTGTGGCTCAAAGGACCCCAGATACAGCTCAGGCTGCCTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 90 bp ATGCAAGCTGCCTGTGGATCTACCATTCTGGAGTCTGGAGGGCAGTaGCCCACTTCTTATAGCTCCACTAGGCAGTGCCCCAGTGGGGAC +
Preference number: 1 (lower is better)
Translates to: MQAACGSTILESGGQ*PTSYSSTRQCPSGD
Trigger: GTCCCCACTGGGGCACTGCCTAGTGGAGCTATAAGAAGTGGGCCACTGCCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 90 bp CTCACTGGTTGGAGCTGGGTGTCTGAGGCTTTCCCAGGTACAGGATaGAAGCTGCCTGTGGATCTACCATTCTGGAGTCTGGAGGGCAGT +
Preference number: 1 (lower is better)
Translates to: LTGWSWVSEAFPGTG*KLPVDLPFWSLEGS
Trigger: ACTGCCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCATCCTGTACCTGGGAAAGCCTCAGACACCCAGCTCCAACCAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 90 bp GCTGGGTGTCTGAGGCTTTCCCAGGTACAGGATGCAAGCTGCCTGTaGATCTACCATTCTGGAGTCTGGAGGGCAGTGGCCCACTTCTTA +
Preference number: 1 (lower is better)
Translates to: AGCLRLSQVQDASCL*IYHSGVWRAVAHFL
Trigger: TAAGAAGTGGGCCACTGCCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCATCCTGTACCTGGGAAAGCCTCAGACACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 90 bp AGGCTTATGGCTTGCATCCTCTGGACAGGCAGCCTGAGCTGTATCTaGGGTCCTTTGAGCCACAGCTGGAGCTGTAGTAGCTGGGATTCA +
Preference number: 1 (lower is better)
Translates to: RLMACILWTGSLSCI*GPLSHSWSCSSWDS
Trigger: TGAATCCCAGCTACTACAGCTCCAGCTGTGGCTCAAAGGACCCCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCATAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 90 bp TTTAGTACCACATGGAAGCCACCAAGGCTTATGGCTTGCATCCTCTaGACAGGCAGCCTGAGCTGTATCTGGGGTCCTTTGAGCCACAGC +
Preference number: 1 (lower is better)
Translates to: FSTTWKPPRLMACIL*TGSLSCIWGPLSHS
Trigger: GCTGTGGCTCAAAGGACCCCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCATAAGCCTTGGTGGCTTCCATGTGGTACTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 90 bp CTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTaGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCAC +
Preference number: 1 (lower is better)
Translates to: LPGHPGYLSHHLKSL*ELPSLLHSCILCAH
Trigger: GTGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 90 bp GCTATGCCTTCTCAAGCCAGCAATCCAGGACTAGTTAGGCAGCCATaGCTCTCAGGCATGGCTGACAGTCCATCTCAGATAGACTTGACT +
Preference number: 1 (lower is better)
Translates to: AMPSQASNPGLVRQP*LSGMADSPSQIDLT
Trigger: AGTCAAGTCTATCTGAGATGGACTGTCAGCCATGCCTGAGAGTCATGGCTGCCTAACTAGTCCTGGATTGCTGGCTTGAGAAGGCATAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
3UTR GCA 90 bp GCACTTGGCTCCCATTTAGTCATGCTAGTTTCTCTAGCAAGTAGTTaGTCCATACCCTGCTGGGATTCTTTCTCTGCCACATGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: ALGSHLVMLVSLASS*SIPCWDSFSATWPG
Trigger: GCCTGGCCATGTGGCAGAGAAAGAATCCCAGCAGGGTATGGAGCAACTACTTGCTAGAGAAACTAGCATGACTAAATGGGAGCCAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 90 bp GGTGGTGTGATCAGAGGTCATGGAAGTTCCACATCCCTTTCCACATaGCTTGCCCTATGCATCTCTTCCATCTGGCTGTTCCTGAGTTGT +
Preference number: 1 (lower is better)
Translates to: GGVIRGHGSSTSLST*LALCISSIWLFLSC
Trigger: ACAACTCAGGAACAGCCAGATGGAAGAGATGCATAGGGCAAGGCATGTGGAAAGGGATGTGGAACTTCCATGACCTCTGATCACACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR TCA 90 bp TTCCATCTGCTCAGAGTGTTTCCACTTCTCTGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGTGAAGAC +
Preference number: 1 (lower is better)
Translates to: FHLLRVFPLLCGLRN*LILMLEFCIVAGED
Trigger: GTCTTCACCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGAGAAGTGGAAACACTCTGAGCAGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR GCA 90 bp TGTGATCAGAGGTCATGGAAGTTCCACATCCCTTTCCACATGCCTTaGCCTATGCATCTCTTCCATCTGGCTGTTCCTGAGTTGTGTCCT +
Preference number: 1 (lower is better)
Translates to: CDQRSWKFHIPFHMP*PMHLFHLAVPELCP
Trigger: AGGACACAACTCAGGAACAGCCAGATGGAAGAGATGCATAGGGCAAGGCATGTGGAAAGGGATGTGGAACTTCCATGACCTCTGATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR GCA 90 bp TCTTCATCTTTCATATCTCGATTCTGTTGTGAGCCCTCCTCCTTCTaGCCCTCTCTTGGAAAACTGCCCTCCTTTACTGACTCCTCTGGA +
Preference number: 1 (lower is better)
Translates to: SSSFISRFCCEPSSF*PSLGKLPSFTDSSG
Trigger: TCCAGAGGAGTCAGTAAAGGAGGGCAGTTTTCCAAGAGAGGGGCAGAAGGAGGAGGGCTCACAACAGAATCGAGATATGAAAGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000509712.6
3UTR GCA 90 bp TGGTCCTCCTGCCTTCTTCTGAGCCCTCCAAACTCTTCCAATCTCTaGCTGTTACCCAGTTCCAAACTTGCTTCCACATTTTCAGGTATC +
Preference number: 1 (lower is better)
Translates to: WSSCLLLSPPNSSNL*LLPSSKLASTFSGI
Trigger: GATACCTGAAAATGTGGAAGCAAGTTTGGAACTGGGTAACAGGCAGAGATTGGAAGAGTTTGGAGGGCTCAGAAGAAGGCAGGAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 90 bp CATCATCTGAAATCTTTGTGGGAGCTGCCAAGCCTCCTTCACTCTTaGATTCTATGTGCCCACAGGTTTAGTACCACATGGAAGCCACCA +
Preference number: 1 (lower is better)
Translates to: HHLKSLWELPSLLHS*ILCAHRFSTTWKPP
Trigger: TGGTGGCTTCCATGTGGTACTAAACCTGTGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATTTCAGATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 90 bp GGCTTACAGATATGCAGACTATACAGGAAGCATGGTATCGGCATCTaGTCAGCTTCTGGTGAGGGACTCAGGAAGCTAACAATCATGGTG +
Preference number: 1 (lower is better)
Translates to: GLQICRLYRKHGIGI*SASGEGLRKLTIMV
Trigger: CACCATGATTGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGCATATCTGTAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000666893.1
ENST00000671281.1
3UTR CCA 90 bp GCAAGTAGTTGCTCCATACCCTGCTGGGATTCTTTCTCTGCCACATaGCCAGGCTGCAAATTTGCTGAATTTTTATGCTCTGCTTCCCTT +
Preference number: 1 (lower is better)
Translates to: ASSCSIPCWDSFSAT*PGCKFAEFLCSASL
Trigger: AAGGGAAGCAGAGCATAAAAATTCAGCAAATTTGCAGCCTGGCCATGTGGCAGAGAAAGAATCCCAGCAGGGTATGGAGCAACTACTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 90 bp CATTTAGTCATGCTAGTTTCTCTAGCAAGTAGTTGCTCCATACCCTaGTGGGATTCTTTCTCTGCCACATGGCCAGGCTGCAAATTTGCT +
Preference number: 1 (lower is better)
Translates to: HLVMLVSLASSCSIP*WDSFSATWPGCKFA
Trigger: AGCAAATTTGCAGCCTGGCCATGTGGCAGAGAAAGAATCCCAGCAGGGTATGGAGCAACTACTTGCTAGAGAAACTAGCATGACTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 90 bp GTCTGGCTATGTTGCCCAGACAGGAATACAGGGGCTATTCACATATaGAATCATAGCATACTGAGCCTTGAACTTCTGGCCACAAGCAAT +
Preference number: 1 (lower is better)
Translates to: VWLCCPDRNTGAIHI*NHSILSLELLATSN
Trigger: ATTGCTTGTGGCCAGAAGTTCAAGGCTCAGTATGCTATGATTGCATATGTGAATAGCCCCTGTATTCCTGTCTGGGCAACATAGCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR CCA 90 bp CTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTaGAACAGGAAACTCCTTAAGATTCTCTCCTCTGCGAATATGGAT +
Preference number: 1 (lower is better)
Translates to: LCWRERSQLASMPPF*NRKLLKILSSANMD
Trigger: ATCCATATTCGCAGAGGAGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR CCA 90 bp GCTGGTGAAGACCTCAGTGCTGTATATTTCTTTCTGTTTCTTTGTTaGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAAC +
Preference number: 1 (lower is better)
Translates to: AGEDLSAVYFFLFLC*RERSQLASMPPFWN
Trigger: GTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAGAAACAGAAAGAAATATACAGCACTGAGGTCTTCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR CCA 90 bp TTAGTCATGCTAGTTTCTCTAGCAAGTAGTTGCTCCATACCCTGCTaGGATTCTTTCTCTGCCACATGGCCAGGCTGCAAATTTGCTGAA +
Preference number: 1 (lower is better)
Translates to: LVMLVSLASSCSIPC*DSFSATWPGCKFAE
Trigger: TTCAGCAAATTTGCAGCCTGGCCATGTGGCAGAGAAAGAATCCCAGCAGGGTATGGAGCAACTACTTGCTAGAGAAACTAGCATGACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 90 bp GGAACACAGGGGACTTCTGAGAGGCTGGGAATTTCTTGTGGTGAGTaGTATACACTTACAAGTTGTGCACTTTTGGTAGATATGCTTGGG +
Preference number: 1 (lower is better)
Translates to: GTQGTSERLGISCGE*YTLTSCALLVDMLG
Trigger: CCCAAGCATATCTACCAAAAGTGCACAACTTGTAAGTGTATACCACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR TCA 90 bp TTCCGCTGCAGGTCCAAAATCTGTAGTCCCAGCTACTCAGGAAGCTaGGTATTTGTTTGTTTGATAGATAATGCCAAACTGCCTCCACAG +
Preference number: 1 (lower is better)
Translates to: FRCRSKICSPSYSGS*VFVCLIDNAKLPPQ
Trigger: CTGTGGAGGCAGTTTGGCATTATCTATCAAACAAACAAATACTCAGCTTCCTGAGTAGCTGGGACTACAGATTTTGGACCTGCAGCGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509712.6
3UTR GCA 90 bp CCAAGTTCTGCCCTCGTTCATATCGAAGCTCATTTTCAGCTGAGTTaGATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTA +
Preference number: 1 (lower is better)
Translates to: PSSALVHIEAHFQLS*IESGAGANSGEVVV
Trigger: TACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTGAAAATGAGCTTCGATATGAACGAGGGCAGAACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
ENST00000670783.1
3UTR TCA 90 bp CAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGTaGAGACCTCAGTGCTGTATATTTCTTTCTGTTTCTTTGTTGGAG +
Preference number: 1 (lower is better)
Translates to: QELTHPHAGVLHCCW*RPQCCIFLSVSLLE
Trigger: CTCCAACAAAGAAACAGAAAGAAATATACAGCACTGAGGTCTTCACCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR TCA 90 bp TTCCAGACTTCCCTGCTAGCAGGGATCAAGTGTAGTTTCTGCAGATaGGAGGAACTTGCACACAATTTGGAAAGCATAAGGGAAGGAAAA +
Preference number: 1 (lower is better)
Translates to: FQTSLLAGIKCSFCR*EELAHNLESIREGK
Trigger: TTTTCCTTCCCTTATGCTTTCCAAATTGTGTGCAAGTTCCTCTCATCTGCAGAAACTACACTTGATCCCTGCTAGCAGGGAAGTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR GCA 90 bp TCAACTTTCAAGGCCTTCTCTGCAGTGTCAAGACCAGATGCCAACTaGTTCTCTCTCTCTCTCTCTTTTGACCACTCACTTTCAAACATT +
Preference number: 1 (lower is better)
Translates to: STFKAFSAVSRPDAN*FSLSLSFDHSLSNI
Trigger: AATGTTTGAAAGTGAGTGGTCAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGAAGGCCTTGAAAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
3UTR TCA 90 bp CCCACAGTTTTTCCAGGGGAGTGGTTTCCAAGTTGCTTATTCTCTTaGGATTCACACACCTCTCCTTTAAGTCTTTCAACCATTTCACCA +
Preference number: 1 (lower is better)
Translates to: PTVFPGEWFPSCLFS*DSHTSPLSLSTISP
Trigger: TGGTGAAATGGTTGAAAGACTTAAAGGAGAGGTGTGTGAATCTCAAGAGAATAAGCAACTTGGAAACCACTCCCCTGGAAAAACTGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000664418.1
3UTR TCA 90 bp TTATCTTTTCCTCTAGCTGCTGCTTCTCTGAAATACAAGTGTCTGTaGGACAGACTTTATGAGCATGTTCTAATTTCCGCTGCAGGTCCA +
Preference number: 1 (lower is better)
Translates to: LSFPLAAASLKYKCL*DRLYEHVLISAAGP
Trigger: TGGACCTGCAGCGGAAATTAGAACATGCTCATAAAGTCTGTCTCACAGACACTTGTATTTCAGAGAAGCAGCAGCTAGAGGAAAAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000670783.1
3UTR CCA 90 bp CATTTTGGAACAGGAAACTCCTTAAGATTCTCTCCTCTGCGAATATaGATGCTCCTTATAATTCGCTCTAAGAAGCCAATCTGCTGTGTG +
Preference number: 1 (lower is better)
Translates to: HFGTGNSLRFSPLRI*MLLIIRSKKPICCV
Trigger: CACACAGCAGATTGGCTTCTTAGAGCGAATTATAAGGAGCATCCATATTCGCAGAGGAGAGAATCTTAAGGAGTTTCCTGTTCCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR CCA 90 bp GTACATCCAGTTGGTGTCCACAAAGAATTGGAGAATTGCTTAGTATaGGGAAAAACTCACATAACTGGTGTCAGAAGTTGTATTTGGCCA +
Preference number: 1 (lower is better)
Translates to: VHPVGVHKELENCLV*GKTHITGVRSCIWP
Trigger: TGGCCAAATACAACTTCTGACACCAGTTATGTGAGTTTTTCCCCATACTAAGCAATTCTCCAATTCTTTGTGGACACCAACTGGATGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR TCA 90 bp GATCGAACCCTATTTCTTAAAGCCAGAATTTCCTCATCCAGTCTCTaGTTTTGTTCCTTTGCTTTCTGTAGGTCAGCTGCATCATTTTCT +
Preference number: 1 (lower is better)
Translates to: DRTLFLKARISSSSL*FCSFAFCRSAASFS
Trigger: AGAAAATGATGCAGCTGACCTACAGAAAGCAAAGGAACAAAATCAGAGACTGGATGAGGAAATTCTGGCTTTAAGAAATAGGGTTCGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000664418.1
3UTR GCA 90 bp AGCTTCAATAATCGCAAATATTCTTCACGTAGAGCTTCCTTCTCTTaGTGTAGCTTAGATAGCTTCTCTGACAATTCCTGGTTGCTTTTG +
Preference number: 1 (lower is better)
Translates to: SFNNRKYSSRRASFS*CSLDSFSDNSWLLL
Trigger: CAAAAGCAACCAGGAATTGTCAGAGAAGCTATCTAAGCTACAGCAAGAGAAGGAAGCTCTACGTGAAGAATATTTGCGATTATTGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR CCA 90 bp TATTCTTCTTGTAGTTTAGAAGTTAAGCCACAAGGTAAAAGCATTTaGATGGATGCTGAGTATCCCAAGTGGACTGTGCTAGAACTCAAC +
Preference number: 1 (lower is better)
Translates to: YSSCSLEVKPQGKSI*MDAEYPKWTVLELN
Trigger: GTTGAGTTCTAGCACAGTCCACTTGGGATACTCAGCATCCATCCAAATGCTTTTACCTTGTGGCTTAACTTCTAAACTACAAGAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR GCA 90 bp TCTTTCTCTGCCACATGGCCAGGCTGCAAATTTGCTGAATTTTTATaGTCTGCTTCCCTTTTGAATATAAGTTCCAACTTTAAGTCATTC +
Preference number: 1 (lower is better)
Translates to: SFSATWPGCKFAEFL*SASLLNISSNFKSF
Trigger: GAATGACTTAAAGTTGGAACTTATATTCAAAAGGGAAGCAGAGCATAAAAATTCAGCAAATTTGCAGCCTGGCCATGTGGCAGAGAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 90 bp ACAACTGCTTTAATGAATTTATCAGCAGTTTTGAAGACTCTTGGGTaGTATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGT +
Preference number: 1 (lower is better)
Translates to: TTALMNLSAVLKTLG*YPFGICGNSSQCHG
Trigger: ACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAAGAGTCTTCAAAACTGCTGATAAATTCATTAAAGCAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000671538.1
3UTR TCA 90 bp CAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTaGAGTATTCAGAGTGGTACGAGTATAGAAAGAAGAAACAGGTTT +
Preference number: 1 (lower is better)
Translates to: QQEIWRGESSKLYQK*SIQSGTSIERRNRF
Trigger: AAACCTGTTTCTTCTTTCTATACTCGTACCACTCTGAATACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR TCA 90 bp GTCCAAAGTCCTAAGTCTCTTCTGAGACTTATCTCCTTCCACTTATaGGCCTGTAAAAATCAAAATAAGTCATTTACTCCCAAGATACAG +
Preference number: 1 (lower is better)
Translates to: VQSPKSLLRLISFHL*ACKNQNKSFTPKIQ
Trigger: CTGTATCTTGGGAGTAAATGACTTATTTTGATTTTTACAGGCTCATAAGTGGAAGGAGATAAGTCTCAGAAGAGACTTAGGACTTTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 90 bp GTCTTAACTCATTCCAGCATCAAGTCCAAAGTCCTAAGTCTCTTCTaGGACTTATCTCCTTCCACTTATGAGCCTGTAAAAATCAAAATA +
Preference number: 1 (lower is better)
Translates to: VLTHSSIKSKVLSLF*DLSPSTYEPVKIKI
Trigger: TATTTTGATTTTTACAGGCTCATAAGTGGAAGGAGATAAGTCTCAGAAGAGACTTAGGACTTTGGACTTGATGCTGGAATGAGTTAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp GCTGAATATGTGGAGGTCCTGGGAGGGTGGTGTGATCAGAGGTCATGGAAGTTCAGCAGCCCCTGTGGCTaGTCTCACTGGTTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: AEYVEVLGGWCDQRSWKFSSPCG*SHWLEL
Trigger: CAGCTCCAACCAGTGAGATCAGCCACAGGGGCTGCT...GAACTTCCATGACCTCTGATCACACCACCCTCCCAGGACCTCCACATATTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR GCA 90 bp CAAGCTGCCTGTGGATCTACCATTCTGGAGTCTGGAGGGCAGTGGCCCACTTCTACAGTTGTGAGCCACTaGTCCTGGTCCTCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: QAACGSTILESGGQWPTSTVVSH*SWSSCL
Trigger: AAGGCAGGAGGACCAGGAGCAGTGGCTCACAACTGT...AGAAGTGGGCCACTGCCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp CTACCATTCTGGAGTCTGGAGGGCAGTGGCCCACTTCTTATAGCTCCACTAGGCTACCATTCTGGAGTCTaGAGGGCAGTGGCCCACTTC +
Preference number: 2 (lower is better)
Translates to: LPFWSLEGSGPLLIAPLGYHSGV*RAVAHF
Trigger: GAAGTGGGCCACTGCCCTCCAGACTCCAGAATGGTA...GCCTAGTGGAGCTATAAGAAGTGGGCCACTGCCCTCCAGACTCCAGAATGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp GCTGAATATGTGGAGGTCCTGGGAGGGTGGTGTGATCAGAGGTCATGGAAGTTCGTAGCTCTTCTCCTGTaGCTTTGCAGGCAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: AEYVEVLGGWCDQRSWKFVALLL*LCRQQP
Trigger: GGGCTGCTGCCTGCAAAGCCACAGGAGAAGAGCTAC...GAACTTCCATGACCTCTGATCACACCACCCTCCCAGGACCTCCACATATTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR TCA 90 bp CAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTGAGCAGCAGTCCTTTCTaGCTCTACTCTCCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: QDSSCKFSTLTLQEVASLSSSPF*LYSPLV
Trigger: GACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTGCT...CAGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp CTTTGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCACAGGTGTATCTGGGGTCCTTTaGGCCACAGCTGGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: LCGSCQASFTLAFYVPTGVSGVL*ATAGAV
Trigger: TACAGCTCCAGCTGTGGCTCAAAGGACCCCAGATAC...ACCTGTGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR GCA 90 bp GCTGAATATGTGGAGGTCCTGGGAGGGTGGTGTGATCAGAGGTCATGGAAGTTCCCAAGGCTTATGGCTTaGATCCTCTGGACAGGCAGC +
Preference number: 2 (lower is better)
Translates to: AEYVEVLGGWCDQRSWKFPRLMA*ILWTGS
Trigger: GCTGCCTGTCCAGAGGATGCAAGCCATAAGCCTTGG...GAACTTCCATGACCTCTGATCACACCACCCTCCCAGGACCTCCACATATTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR GCA 90 bp GAAATCTTTGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCACTTCTCCTGTGGCTTTaGAGGCAGCAGCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: EIFVGAAKPPSLLHSMCPLLLWL*RQQPLW
Trigger: CCACAGGGGCTGCTGCCTGCAAAGCCACAGGAGAAG...TGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp AGCCACAGCTGGAGCTGTAGTAGCTGGGATTCAGGGAGCAGTGTCCTGAGGCTGCATCTGAAATCTTTGTaGGAGCTGCCAAGCCTCCTT +
Preference number: 2 (lower is better)
Translates to: SHSWSCSSWDSGSSVLRLHLKSL*ELPSLL
Trigger: AAGGAGGCTTGGCAGCTCCCACAAAGATTTCAGATG...CAGCCTCAGGACACTGCTCCCTGAATCCCAGCTACTACAGCTCCAGCTGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp TGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCCTAGTTAGGCAGCCATaGCTCTCAGGCATGGCTGAC +
Preference number: 2 (lower is better)
Translates to: WRERSQLASMPPFWNRKLLVRQP*LSGMAD
Trigger: GTCAGCCATGCCTGAGAGTCATGGCTGCCTAACTAG...GAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR CCA 90 bp GAAATCTTTGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCAAGGCAGCAGCCCCTGTaGCTGATCTCACTGGTTGGA +
Preference number: 2 (lower is better)
Translates to: EIFVGAAKPPSLLHSMCPRQQPL*LISLVG
Trigger: TCCAACCAGTGAGATCAGCCACAGGGGCTGCTGCCT...TGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CAA 90 bp GTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTaGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCC +
Preference number: 2 (lower is better)
Translates to: VLPGHPGYLSHHLKS*WELPSLLHSCILCA
Trigger: GGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp TGGTCAGCTTCTGGTGAGGGACTCAGGAAGCTAACAATCATGGTGGTAGGTGAAAGCAGCAGTCCTTTCTaGCTCTACTCTCCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: WSASGEGLRKLTIMVVGESSSPF*LYSPLV
Trigger: GACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTGCT...TTCACCTACCACCATGATTGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp GGAGCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCACTGGTCAGCTTCTGGTaGGGGACTCAGGAAGCTAAC +
Preference number: 2 (lower is better)
Translates to: GARESGEVPHTFKHLDLALVSFW*GTQEAN
Trigger: GTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAG...TGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp GCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGACGACTCTACTCTCCCCTaGTCCCTTCCAACTGTTTTG +
Preference number: 2 (lower is better)
Translates to: ADYTGSMVSASGQLLVRDDSTLP*SLPTVL
Trigger: CAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTC...GTCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp TCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGGAGCTCAGCCTCTCAAGCGCTaGGATTACAGTTGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: SAWAPRLSLTSSEIFVGAQPLKR*DYSCEP
Trigger: TGGCTCACAACTGTAATCCCAGCGCTTGAGAGGCTG...AGCTCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp AGCCACAGCTGGAGCTGTAGTAGCTGGGATTCAGGGAGCAGTGTCCTGAGGCTGACTTCCACAGATCCTTaGTACATGAACACAATGCAG +
Preference number: 2 (lower is better)
Translates to: SHSWSCSSWDSGSSVLRLTSTDP*YMNTMQ
Trigger: CTGCATTGTGTTCATGTACCAAGGATCTGTGGAAGT...CAGCCTCAGGACACTGCTCCCTGAATCCCAGCTACTACAGCTCCAGCTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp AAATTCCGCCTCCCAGGTTCAAGCCATCTTCCCCACCTCAGCCTCCTGAATAGCTCTTTCTCTGCCACATaGCCAGGCTGCAAATTTGCT +
Preference number: 2 (lower is better)
Translates to: KFRLPGSSHLPHLSLLNSSFSAT*PGCKFA
Trigger: AGCAAATTTGCAGCCTGGCCATGTGGCAGAGAAAGA...GCTATTCAGGAGGCTGAGGTGGGGAAGATGGCTTGAACCTGGGAGGCGGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp AAATTCCGCCTCCCAGGTTCAAGCCATCTTCCCCACCTCAGCCTCCTGAATAGCGAGGTGGCTTCTCTGTaGTTTCTGAACTTCTGGATT +
Preference number: 2 (lower is better)
Translates to: KFRLPGSSHLPHLSLLNSEVASL*FLNFWI
Trigger: AATCCAGAAGTTCAGAAATCACAGAGAAGCCACCTC...GCTATTCAGGAGGCTGAGGTGGGGAAGATGGCTTGAACCTGGGAGGCGGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp GAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTAGGGCAGACAACAGATaGGACATTTGTAGGAGCTTC +
Preference number: 2 (lower is better)
Translates to: ELQDSSCKFSTLTLQEVARADNR*DICRSF
Trigger: GAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCT...AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp GCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGACAATCATGGTGGTAGGTaGAATGGGAGCAGACATGTC +
Preference number: 2 (lower is better)
Translates to: ADYTGSMVSASGQLLVRDNHGGR*NGSRHV
Trigger: GACATGTCTGCTCCCATTTCACCTACCACCATGATT...GTCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp GAAGTTCCACATCCCTTTCCACATGCCTTGCCCTATGCATCTCTTCCATCTGGCGACTCTACTCTCCCCTaGTCCCTTCCAACTGTTTTG +
Preference number: 2 (lower is better)
Translates to: EVPHPFPHALPYASLPSGDSTLP*SLPTVL
Trigger: CAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTC...GCCAGATGGAAGAGATGCATAGGGCAAGGCATGTGGAAAGGGATGTGGAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CCA 90 bp CAGCATCAAGCCATTTATGAGGGACCCACCCCCATGACAAAACCACCTCCTGTTGACTCTACTCTCCCCTaGTCCCTTCCAACTGTTTTG +
Preference number: 2 (lower is better)
Translates to: QHQAIYEGPTPMTKPPPVDSTLP*SLPTVL
Trigger: CAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTC...AACAGGAGGTGGTTTTGTCATGGGGGTGGGTCCCTCATAAATGGCTTGATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp GAAAGCGTGGTGCCAGCATCTGCTCAGCTTCTGGTGAGGGCCTCAGGAAGCTCATTTAGCACTAGCAGATaGATAAAAGGGCAGACAACA +
Preference number: 2 (lower is better)
Translates to: ESVVPASAQLLVRASGSSFSTSR*IKGQTT
Trigger: TGTTGTCTGCCCTTTTATCCATCTGCTAGTGCTAAA...TGAGCTTCCTGAGGCCCTCACCAGAAGCTGAGCAGATGCTGGCACCACGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp TCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGGAGCTCGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 2 (lower is better)
Translates to: SAWAPRLSLTSSEIFVGARCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...AGCTCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666893.1
3UTR-3UTR TCA 90 bp TGCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGAAGGGCAGACAACAGATaGGACATTTGTAGGAGCTTC +
Preference number: 2 (lower is better)
Translates to: CRLYRKHGIGIWSASGEGRADNR*DICRSF
Trigger: GAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCT...TCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR GCA 90 bp TCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGGAGCTAATCTTTGTGGGAGCTaGCAAGCCTCCTTCACTCTT +
Preference number: 2 (lower is better)
Translates to: SAWAPRLSLTSSEIFVGANLCGS*QASFTL
Trigger: AAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATT...AGCTCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR GCA 90 bp TCCACCCATGACCCCTCAAATTGCATGTCTTTCTCACACTACAAGATACAATCACTTCTCCTGTGGCTTTaGAGGCAGCAGCCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: STHDPSNCMSFSHYKIQSLLLWL*RQQPLW
Trigger: CCACAGGGGCTGCTGCCTGCAAAGCCACAGGAGAAG...TGATTGTATCTTGTAGTGTGAGAAAGACATGCAATTTGAGGGGTCATGGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR GCA 90 bp CTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGTCTCCAGATGATGGATaGAGAGTTCCTCTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: LWPQELTHPHAGVLHCCWSPDDG*RVPLSL
Trigger: AAGAGACAGAGGAACTCTGCATCCATCATCTGGAGA...CCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR CCA 90 bp AGGAAGCTCACAATCATGATGGTAGGTGAAGTGGGAGCAGACATGTCATATGGTATGGCTTGCATCCTCTaGACAGGCAGCCTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: RKLTIMMVGEVGADMSYGMACIL*TGSLSC
Trigger: ACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCAT...ACCATATGACATGTCTGCTCCCACTTCACCTACCATCATGATTGTGAGCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp AGCAGATGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGAAGCAGCAGTCCTTTCTaGCTCTACTCTCCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: SRWIKGQTTDETFVGASGSSSPF*LYSPLV
Trigger: GACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTGCT...TCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp GATGAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACAGCAGCAGTCCTTTCTaGCTCTACTCTCCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: DETFVGASGQFLQILHFDSSSPF*LYSPLV
Trigger: GACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTGCT...GTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp TGGTCAGCTTCTGGTGAGGGACTCAGGAAGCTAACAATCATGGTGGTAGGTGAAAATCATGGTGGTAGGTaGAATGGGAGCAGACATGTC +
Preference number: 2 (lower is better)
Translates to: WSASGEGLRKLTIMVVGENHGGR*NGSRHV
Trigger: GACATGTCTGCTCCCATTTCACCTACCACCATGATT...TTCACCTACCACCATGATTGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR GCA 90 bp CTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGCATTTTCAGCTGAGTTaGATAGAATCTGGAGCCGGT +
Preference number: 2 (lower is better)
Translates to: LCWRERSQLASMPPFWNRHFQLS*IESGAG
Trigger: ACCGGCTCCAGATTCTATGCAACTCAGCTGAAAATG...CCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp CAGCAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGGAGAGAGCGGAGAGGTaGCACACACTTTTAAACATC +
Preference number: 2 (lower is better)
Translates to: QQSFLTLLSPGPFQLFCKERAER*HTLLNI
Trigger: GATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTC...CTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR GCA 90 bp GATACAGTGGTAGTACAGGCATTAGGTAAACATCACAATTCCAAAAGGGAGAAACCTGTGGCAGGGTTCTaGCTGGGCACCCAGGCTATC +
Preference number: 2 (lower is better)
Translates to: DTVVVQALGKHHNSKREKPVAGF*LGTQAI
Trigger: GATAGCCTGGGTGCCCAGGCAGAACCCTGCCACAGG...TTTCTCCCTTTTGGAATTGTGATGTTTACCTAATGCCTGTACTACCACTGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp GAGAAAAGAAGTTTAATTGGCTCATGGTTCTGCCGGCTATACAGAAAGCGTGGTATGGCTTGCATCCTCTaGACAGGCAGCCTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: EKRSLIGSWFCRLYRKRGMACIL*TGSLSC
Trigger: ACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCAT...ACCACGCTTTCTGTATAGCCGGCAGAACCATGAGCCAATTAAACTTCTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CCA 90 bp AAATTCCGCCTCCCAGGTTCAAGCCATCTTCCCCACCTCAGCCTCCTGAATAGCATGAGCTACCATGCCTaGCTACATACTTTCAAACAA +
Preference number: 2 (lower is better)
Translates to: KFRLPGSSHLPHLSLLNSMSYHA*LHTFKQ
Trigger: TTGTTTGAAAGTATGTAGCCAGGCATGGTAGCTCAT...GCTATTCAGGAGGCTGAGGTGGGGAAGATGGCTTGAACCTGGGAGGCGGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp GGAGCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAGAGGTGGCTTCTCTGTaGTTTCTGAACTTCTGGATT +
Preference number: 2 (lower is better)
Translates to: GARESGEVPHTFKHLDLAEVASL*FLNFWI
Trigger: AATCCAGAAGTTCAGAAATCACAGAGAAGCCACCTC...TGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp CTGAGAGGCTGGGAATTTCTTGTGGTGAGTGGTATACACTTACAAGTTGTGCACAACACAGGGGACTTCTaGGAGGCTGGGAATTTCTTG +
Preference number: 2 (lower is better)
Translates to: LRGWEFLVVSGIHLQVVHNTGDF*EAGNFL
Trigger: CAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTT...GTGCACAACTTGTAAGTGTATACCACTCACCACAAGAAATTCCCAGCCTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CCA 90 bp GAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGACTCTACTCTCCCCTaGTCCCTTCCAACTGTTTTG +
Preference number: 2 (lower is better)
Translates to: ETFVGASGQFLQILHFDADSTLP*SLPTVL
Trigger: CAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTC...AGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp CTTTGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCACAGGTTTTAGCACTAGCAGATaGATAAAAGGGCAGACAACA +
Preference number: 2 (lower is better)
Translates to: LCGSCQASFTLAFYVPTGFSTSR*IKGQTT
Trigger: TGTTGTCTGCCCTTTTATCCATCTGCTAGTGCTAAA...ACCTGTGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp AGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGACTTCCACAGATCCTTaGTACATGAACACAATGCAG +
Preference number: 2 (lower is better)
Translates to: RVLPGHPGYLSHHLKSLWTSTDP*YMNTMQ
Trigger: CTGCATTGTGTTCATGTACCAAGGATCTGTGGAAGT...CCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CAA 90 bp TCTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATaGTTGCTGGTGAAGACCTCAGTGCTGTATATTTCTTTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: SVASGTDSSSCWSSA*LLVKTSVLYISFCF
Trigger: GAAACAGAAAGAAATATACAGCACTGAGGTCTTCACCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR CAA 90 bp GCCACCACGCCTGGCCTGGATTTACTTTTTCTGTCCATAACGCTTTaGCCAGGACCACCATTTGTGGACTTACCAAATTCCTTATTTCTC +
Preference number: 2 (lower is better)
Translates to: ATTPGLDLLFLSITL*PGPPFVDLPNSLFL
Trigger: GAGAAATAAGGAATTTGGTAAGTCCACAAATGGTGGTCCTGGCAAAAGCGTTATGGACAGAAAAAGTAAATCCAGGCCAGGCGTGGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR TCA 90 bp GAAGCCACATTTATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCAGGCACCACTGTCATCTaGACTATCCCCAGAGCTCTG +
Preference number: 2 (lower is better)
Translates to: EATFMYPASEFCEHTRFSGTTVI*TIPRAL
Trigger: CAGAGCTCTGGGGATAGTTCAGATGACAGTGGTGCC...TGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACATAAATGTGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR TCA 90 bp TGGATGCTCCTTATAATTCGCTCTAAGAAGCCAATCTGCTGTGTGAGACGAAGAGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 2 (lower is better)
Translates to: WMLLIIRSKKPICCVRRRACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...TCTTCGTCTCACACAGCAGATTGGCTTCTTAGAGCGAATTATAAGGAGCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
3UTR-3UTR TCA 90 bp CTTTGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCACAGGTAACTCATCTACGTTCTaGTATAGAAGTTTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LCGSCQASFTLAFYVPTGNSSTF*YRSFLF
Trigger: GAAGAGGAAACTTCTATATCAGAACGTAGATGAGTT...ACCTGTGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666893.1
3UTR-3UTR TCA 90 bp TGTGGCAGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTAAACTATATCAGAAGTaGAGTATTCAGAGTGGTACG +
Preference number: 2 (lower is better)
Translates to: CGRVLPGHPGYLSHHLKSKLYQK*SIQSGT
Trigger: CGTACCACTCTGAATACTTCACTTCTGATATAGTTT...AGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCTGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp GCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATAAATCATGGTGGTAGGTaGAATGGGAGCAGACATGTC +
Preference number: 2 (lower is better)
Translates to: ARESGEVPHTFKHLDLAINHGGR*NGSRHV
Trigger: GACATGTCTGCTCCCATTTCACCTACCACCATGATT...TATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp AAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAAATCATGGTGGTAGGTaGAATGGGAGCAGACATGTC +
Preference number: 2 (lower is better)
Translates to: KGQTTDETFVGASGQFLQNHGGR*NGSRHV
Trigger: GACATGTCTGCTCCCATTTCACCTACCACCATGATT...TTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp CTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGAAGAAATGCCATATGTaGGGACATCATGTACATAGA +
Preference number: 2 (lower is better)
Translates to: LWPQELTHPHAGVLHCCWKKCHM*GHHVHR
Trigger: TCTATGTACATGATGTCCTCACATATGGCATTTCTT...CCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR TCA 90 bp AATCGCAAATATTCTTCACGTAGAGCTTCCTTCTCTTGCTGTAGCTTAGATAGCCTAGTTAGGCAGCCATaGCTCTCAGGCATGGCTGAC +
Preference number: 2 (lower is better)
Translates to: NRKYSSRRASFSCCSLDSLVRQP*LSGMAD
Trigger: GTCAGCCATGCCTGAGAGTCATGGCTGCCTAACTAG...GCTATCTAAGCTACAGCAAGAGAAGGAAGCTCTACGTGAAGAATATTTGCGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp GCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATAAGACCAGATGCCAACTaGTTCTCTCTCTCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: ARESGEVPHTFKHLDLAIRPDAN*FSLSLS
Trigger: AGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCT...TATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658812.1
3UTR-3UTR GCA 90 bp AATCTTAAAGCTCCAAAATACTCTCCCTTGACTCCATGTCCCACATCCAGGGCAGAGAGAGCGGAGAGGTaGCACACACTTTTAAACATC +
Preference number: 2 (lower is better)
Translates to: NLKAPKYSPLTPCPTSRAERAER*HTLLNI
Trigger: GATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTC...TGCCCTGGATGTGGGACATGGAGTCAAGGGAGAGTATTTTGGAGCTTTAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR GCA 90 bp TATGTGGAGGTCCTGGGAGGGTGGTGTGATCAGAGGTCATGGAAGTTCCACATCGAGACTACAGGTGTATaGCAACACATCCAATTAATT +
Preference number: 2 (lower is better)
Translates to: YVEVLGGWCDQRSWKFHIETTGV*QHIQLI
Trigger: AATTAATTGGATGTGTTGGCATACACCTGTAGTCTC...GATGTGGAACTTCCATGACCTCTGATCACACCACCCTCCCAGGACCTCCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CCA 90 bp TGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGACAGTTCGACTCTACTCTCCCCTaGTCCCTTCCAACTGTTTTG +
Preference number: 2 (lower is better)
Translates to: WIKGQTTDETFVGASGQFDSTLP*SLPTVL
Trigger: CAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTC...GAACTGTCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp GAGAAAAGAAGTTTAATTGGCTCATGGTTCTGCCGGCTATACAGAAAGCGTGGTTGCTCCATACCCTGCTaGGATTCTTTCTCTGCCACA +
Preference number: 2 (lower is better)
Translates to: EKRSLIGSWFCRLYRKRGCSIPC*DSFSAT
Trigger: TGTGGCAGAGAAAGAATCCCAGCAGGGTATGGAGCA...ACCACGCTTTCTGTATAGCCGGCAGAACCATGAGCCAATTAAACTTCTTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CCA 90 bp CAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTGGACTTCTGAGAGGCTaGGAATTTCTTGTGGTGAGT +
Preference number: 2 (lower is better)
Translates to: QKLHSVRTVVTLKEEEGCGLLRG*EFLVVS
Trigger: ACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCC...ACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CCA 90 bp CTGAGAGGCTGGGAATTTCTTGTGGTGAGTGGTATACACTTACAAGTTGTGCACGGACTTCTGAGAGGCTaGGAATTTCTTGTGGTGAGT +
Preference number: 2 (lower is better)
Translates to: LRGWEFLVVSGIHLQVVHGLLRG*EFLVVS
Trigger: ACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCC...GTGCACAACTTGTAAGTGTATACCACTCACCACAAGAAATTCCCAGCCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR TCA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTCTCTCTCTCTCTTTTaGCCACTCACTTTCAAACAT +
Preference number: 2 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGSLSLF*PLTFKH
Trigger: ATGTTTGAAAGTGAGTGGTCAAAAGAGAGAGAGAGA...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR TCA 90 bp CAGCATCAAGCCATTTATGAGGGACCCACCCCCATGACAAAACCACCTCCTGTTTGTGATTTAATGCTCTaGGTGTGTTTAAGTACTTCC +
Preference number: 2 (lower is better)
Translates to: QHQAIYEGPTPMTKPPPVCDLML*VCLSTS
Trigger: GGAAGTACTTAAACACACTCAGAGCATTAAATCACA...AACAGGAGGTGGTTTTGTCATGGGGGTGGGTCCCTCATAAATGGCTTGATGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp AGCAGATGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGAAGGGCAGACAACAGATaGGACATTTGTAGGAGCTTC +
Preference number: 2 (lower is better)
Translates to: SRWIKGQTTDETFVGASGRADNR*DICRSF
Trigger: GAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCT...TCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCATCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp GAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATTCAGAGTGGTACGAGTACTGGTCAGCTTCTGGTaGGGGACTCAGGAAGCTAAC +
Preference number: 2 (lower is better)
Translates to: EENHPNYIRSEVFRVVRVLVSFW*GTQEAN
Trigger: GTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAG...TACTCGTACCACTCTGAATACTTCACTTCTGATATAGTTTGGATGATTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp ATATGTGAGGACATCATGTACATAGAGTTTGTTGGTAGCAGTTCGGGGTTACAGACTCTCAGGCATGGCTaGCAGTCCATCTCAGATAGA +
Preference number: 2 (lower is better)
Translates to: ICEDIMYIEFVGSSSGLQTLRHG*QSISDR
Trigger: TCTATCTGAGATGGACTGTCAGCCATGCCTGAGAGT...CTGTAACCCCGAACTGCTACCAACAAACTCTATGTACATGATGTCCTCACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp ATATTTCTTTCTGTTTCTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCAGACCAGATGCCAACTaGTTCTCTCTCTCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: IFLSVSLLEGEKPACLYARPDAN*FSLSLS
Trigger: AGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCT...GGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAGAAACAGAAAGAAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp TGGATGCTCCTTATAATTCGCTCTAAGAAGCCAATCTGCTGTGTGAGACGAAGAAGTGTCAAGACCAGATaGCAACTGCTTCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: WMLLIIRSKKPICCVRRRSVKTR*QLLLSL
Trigger: GAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACT...TCTTCGTCTCACACAGCAGATTGGCTTCTTAGAGCGAATTATAAGGAGCATCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp TGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCTCTCCAGATGATGGATaGAAAACAGAGATACTGTAT +
Preference number: 2 (lower is better)
Translates to: WRERSQLASMPPFWNRKLSPDDG*KTEILY
Trigger: ATACAGTATCTCTGTTTTGCATCCATCATCTGGAGA...GAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR GCA 90 bp ACAGTGTGTCTCAATGTAAAGGGTCATTTTTATTTCTGGTTACTGATCCTCTCCGTAGAGACAGGGCTTTaGCATGTTGGCCTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: TVCLNVKGHFYFWLLILSVETGL*HVGLAG
Trigger: ACCAGCCAGGCCAACATGGCAAAGCCCTGTCTCTAC...GGAGAGGATCAGTAACCAGAAATAAAAATGACCCTTTACATTGAGACACACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657597.1
3UTR-3UTR CCA 90 bp TGGATGCTCCTTATAATTCGCTCTAAGAAGCCAATCTGCTGTGTGAGACGAAGAGAGTTGCATAGAATCTaGAGCCGGTGCAAATTCTGG +
Preference number: 2 (lower is better)
Translates to: WMLLIIRSKKPICCVRRRELHRI*SRCKFW
Trigger: CCAGAATTTGCACCGGCTCCAGATTCTATGCAACTC...TCTTCGTCTCACACAGCAGATTGGCTTCTTAGAGCGAATTATAAGGAGCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR CCA 90 bp GGAGCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCATTTAGCACTAGCAGATaGATAAAAGGGCAGACAACA +
Preference number: 2 (lower is better)
Translates to: GARESGEVPHTFKHLDLAFSTSR*IKGQTT
Trigger: TGTTGTCTGCCCTTTTATCCATCTGCTAGTGCTAAA...TGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp CAGCATCAAGCCATTTATGAGGGACCCACCCCCATGACAAAACCACCTCCTGTTGTGAAGTATTCAGAGTaGTACGAGTATAGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: QHQAIYEGPTPMTKPPPVVKYSE*YEYRKK
Trigger: CTTCTTTCTATACTCGTACCACTCTGAATACTTCAC...AACAGGAGGTGGTTTTGTCATGGGGGTGGGTCCCTCATAAATGGCTTGATGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp GTAGGTGAAATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGTTTCAGCAAGAGATTTaGAGAGGAGAATCATCCAAA +
Preference number: 2 (lower is better)
Translates to: VGEMGADMSHGDSGSKREFQQEI*RGESSK
Trigger: TTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAA...CTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCATTTCACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp CCTTCCACTTATGAGCCTGTAAAAATCAAAATAAGTCATTTACTCCCAAGATACTGGCAGGGTTCTGCCTaGGCACCCAGGCTATCTCTC +
Preference number: 2 (lower is better)
Translates to: PSTYEPVKIKISHLLPRYWQGSA*APRLSL
Trigger: GAGAGATAGCCTGGGTGCCCAGGCAGAACCCTGCCA...GTATCTTGGGAGTAAATGACTTATTTTGATTTTTACAGGCTCATAAGTGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGAAGCATGATCGGAAATaGTCATCTGAAACCACAGCT +
Preference number: 2 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMKHDRK*SSETTA
Trigger: AGCTGTGGTTTCAGATGACCATTTCCGATCATGCTT...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667947.1
3UTR-3UTR TCA 90 bp TTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTAAGCAGCAGTCCTTTCTaGCTCTACTCTCCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: FSKRFGEENHPNYIRSEVSSSPF*LYSPLV
Trigger: GACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTGCT...TACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp TTAATTGGCTTACAGATATGCAGACTATACAGGAAGCATGGTATCGGCATCTGGAGGGCAGACAACAGATaGGACATTTGTAGGAGCTTC +
Preference number: 2 (lower is better)
Translates to: LIGLQICRLYRKHGIGIWRADNR*DICRSF
Trigger: GAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCT...CCAGATGCCGATACCATGCTTCCTGTATAGTCTGCATATCTGTAAGCCAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp CAGCAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGAAACTATATCAGAAGTaGAGTATTCAGAGTGGTACG +
Preference number: 2 (lower is better)
Translates to: QQSFLTLLSPGPFQLFCKKLYQK*SIQSGT
Trigger: CGTACCACTCTGAATACTTCACTTCTGATATAGTTT...CTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp GTAGATTTTCTTTATCTTGTAAGGTTCTCACTTGCCTGTGTAACTCATCTACGTCTGGTCAGCTTCTGGTaGGGGACTCAGGAAGCTAAC +
Preference number: 2 (lower is better)
Translates to: VDFLYLVRFSLACVTHLRLVSFW*GTQEAN
Trigger: GTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAG...ACGTAGATGAGTTACACAGGCAAGTGAGAACCTTACAAGATAAAGAAAATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000663866.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp CAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGATATGCTTGGGCTTTaGCAAAAATTCCTAGCATGG +
Preference number: 2 (lower is better)
Translates to: QTQKLHSVRTVVTLKEEEDMLGL*QKFLAW
Trigger: CCATGCTAGGAATTTTTGTCAAAGCCCAAGCATATC...TTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR TCA 90 bp GAGAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTAACACAGGGGACTTCTaGGAGGCTGGGAATTTCTTG +
Preference number: 2 (lower is better)
Translates to: EKQTIEGILHIVKRRNCINTGDF*EAGNFL
Trigger: CAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTT...AATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR TCA 90 bp CATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGAGATAGATCTCATGTTCCACCCTaGGATGAGATCAGTACAGTT +
Preference number: 2 (lower is better)
Translates to: HSVRTVVTLKEEEGCRDRSHVPP*DEISTV
Trigger: AACTGTACTGATCTCATCTCAGGGTGGAACATGAGA...TCTATCTCTACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667947.1
3UTR-3UTR TCA 90 bp ACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACTTGCCATTGCTTCTTTTGGTAGGATAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: TRFSGDFSGDFELAIASFGRIIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTATCCTACC...AAAAGAAGCAATGGCAAGTTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000670783.1
3UTR-3UTR GCA 90 bp CGCAAATATTCTTCACGTAGAGCTTCCTTCTCTTGCTGTAGCTTAGATAGCTTCTTTCAAGGCCTTCTCTaGAGTGTCAAGACCAGATGC +
Preference number: 2 (lower is better)
Translates to: RKYSSRRASFSCCSLDSFFQGLL*SVKTRC
Trigger: GCATCTGGTCTTGACACTGCAGAGAAGGCCTTGAAA...GAAGCTATCTAAGCTACAGCAAGAGAAGGAAGCTCTACGTGAAGAATATTTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp AATCTTAAAGCTCCAAAATACTCTCCCTTGACTCCATGTCCCACATCCAGGGCATTTAAGTCCAAGTTCTaGCCTCGTTCATATCGAAGC +
Preference number: 2 (lower is better)
Translates to: NLKAPKYSPLTPCPTSRAFKSKF*PRSYRS
Trigger: GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAA...TGCCCTGGATGTGGGACATGGAGTCAAGGGAGAGTATTTTGGAGCTTTAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666893.1
3UTR-3UTR GCA 90 bp TCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGGAGCTAGTAAGCTATTATGTTaGTTTAAGTCCAAGTTCTGC +
Preference number: 2 (lower is better)
Translates to: SAWAPRLSLTSSEIFVGASKLLC*FKSKFC
Trigger: GCAGAACTTGGACTTAAAGCAACATAATAGCTTACT...AGCTCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666893.1
3UTR-3UTR GCA 90 bp AAACTCCTTAAGATTCTCTCCTCTGCGAATATGGATGCTCCTTATAATTCGCTCGACCCCAGAAAGCTATaGCTTCTCAAGCCAGCAATC +
Preference number: 2 (lower is better)
Translates to: KLLKILSSANMDAPYNSLDPRKL*LLKPAI
Trigger: GATTGCTGGCTTGAGAAGGCATAGCTTTCTGGGGTC...GAGCGAATTATAAGGAGCATCCATATTCGCAGAGGAGAGAATCTTAAGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp ACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACTTGCCATTGCTTCTTTTGACCCCAGAAAGCTATaGCTTCTCAAGCCAGCAATC +
Preference number: 2 (lower is better)
Translates to: TRFSGDFSGDFELAIASFDPRKL*LLKPAI
Trigger: GATTGCTGGCTTGAGAAGGCATAGCTTTCTGGGGTC...AAAAGAAGCAATGGCAAGTTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp AGTTCTGCATTGTTGCTGGTGAAGACCTCAGTGCTGTATATTTCTTTCTGTTTCCTGAGTTCATGCCATTaGACTCCAACCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: SSALLLVKTSVLYISFCFLSSCH*TPTWAT
Trigger: TGTTGCCCAGGTTGGAGTGCAATGGCATGAACTCAG...GAAACAGAAAGAAATATACAGCACTGAGGTCTTCACCAGCAACAATGCAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670783.1
3UTR-3UTR CCA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTAGTTTTGAAGACTCTTaGGTGATATCCATTTGGGAT +
Preference number: 2 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGSFEDS*VISIWD
Trigger: ATCCCAAATGGATATCACCCAAGAGTCTTCAAAACT...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000665812.1
3UTR-3UTR CCA 90 bp GAAGCCACATTTATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCACTTCTGCCCCTCTCTTaGAAAACTGCCCTCCTTTAC +
Preference number: 2 (lower is better)
Translates to: EATFMYPASEFCEHTRFSLLPLS*KTALLY
Trigger: GTAAAGGAGGGCAGTTTTCCAAGAGAGGGGCAGAAG...TGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACATAAATGTGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR CCA 90 bp TTCTCTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGTTTCCTCAGGCTTCATaGTTAACTGCTGTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: FSVASGTDSSSCWSSALLFPQAS*LTAVLF
Trigger: AAAAAGAACAGCAGTTAACCATGAAGCCTGAGGAAA...CAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR CCA 90 bp TTTCAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTATTCAGGCTCTAACATaGAAGCCTCAATCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: FQLSCIESGAGANSGEVVIQALT*KPQSAD
Trigger: GTCAGCAGATTGAGGCTTCCATGTTAGAGCCTGAAT...AACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509712.6
3UTR-3UTR CCA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTTTCAGCAAGAGATTTaGAGAGGAGAATCATCCAAA +
Preference number: 2 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGFQQEI*RGESSK
Trigger: TTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAA...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp CAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTGTAGTTCATCAGTaGGCCTTTGAATCTCTTCAT +
Preference number: 2 (lower is better)
Translates to: QLSCIESGAGANSGEVVVLVVHQ*AFESLH
Trigger: ATGAAGAGATTCAAAGGCTCACTGATGAACTACAAG...TACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000664418.1
3UTR-3UTR TCA 90 bp AGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTAGTTGCTTATTCTCTTaGGATTCACACACCTCTCCT +
Preference number: 2 (lower is better)
Translates to: RSQLASMPPFWNRKLLKISCLFS*DSHTSP
Trigger: AGGAGAGGTGTGTGAATCTCAAGAGAATAAGCAACT...AATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR TCA 90 bp GCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTCTCTTCTCTCTCTCTCTTTTaGCCACTCACTTTCAAACAT +
Preference number: 2 (lower is better)
Translates to: ASLPLCHHFGTGNSLRFSSLSLF*PLTFKH
Trigger: ATGTTTGAAAGTGAGTGGTCAAAAGAGAGAGAGAGA...AGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR TCA 90 bp TCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 2 (lower is better)
Translates to: SEFCEHTRFSGDFSGDFEPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...TTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
3UTR-3UTR TCA 90 bp GAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTTTCTACTTTCCTGACTaGACCCTGACTAAAGGATTA +
Preference number: 2 (lower is better)
Translates to: ETFVGASGQFLQILHFDAFYFPD*TLTKGL
Trigger: TAATCCTTTAGTCAGGGTTCAGTCAGGAAAGTAGAA...AGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp TTCAAGATGAGATTTGGAGGGGATAAAGAACCAAACCGTATCATTCCACCCATGATCTCTCACATCATCTaGAATCTTTGTGGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: FKMRFGGDKEPNRIIPPMISHII*NLCGSC
Trigger: GCAGCTCCCACAAAGATTTCAGATGATGTGAGAGAT...CATGGGTGGAATGATACGGTTTGGTTCTTTATCCCCTCCAAATCTCATCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp AGGAAGCTCACAATCATGATGGTAGGTGAAGTGGGAGCAGACATGTCATATGGTAACAACCAGATCTCATaGAGAGCACACTCACTATTA +
Preference number: 2 (lower is better)
Translates to: RKLTIMMVGEVGADMSYGNNQIS*RAHSLL
Trigger: TAATAGTGAGTGTGCTCTTCATGAGATCTGGTTGTT...ACCATATGACATGTCTGCTCCCACTTCACCTACCATCATGATTGTGAGCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp ATTTCATTCACTACTTCGGATTCAAGGATGTCACTAATTGTTGTTTCCATCTGCAGGCAGAGGTTGCAGTaGGCTGAGTTCATGCCATTG +
Preference number: 2 (lower is better)
Translates to: ISFTTSDSRMSLIVVSICRQRLQ*AEFMPL
Trigger: CAATGGCATGAACTCAGCTCACTGCAACCTCTGCCT...GCAGATGGAAACAACAATTAGTGACATCCTTGAATCCGAAGTAGTGAATGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670783.1
3UTR-3UTR TCA 90 bp ACAGTGTGTCTCAATGTAAAGGGTCATTTTTATTTCTGGTTACTGATCCTCTCCGAGGTTGAGGCTGCATaGGCAGTAATCAAACCACTG +
Preference number: 2 (lower is better)
Translates to: TVCLNVKGHFYFWLLILSEVEAA*AVIKPL
Trigger: CAGTGGTTTGATTACTGCTCATGCAGCCTCAACCTC...GGAGAGGATCAGTAACCAGAAATAAAAATGACCCTTTACATTGAGACACACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657597.1
3UTR-3UTR GCA 90 bp AGTTCTGCATTGTTGCTGGTGAAGACCTCAGTGCTGTATATTTCTTTCTGTTTCCCTCTCTTGGAAAACTaGCCTCCTTTACTGACTCCT +
Preference number: 2 (lower is better)
Translates to: SSALLLVKTSVLYISFCFPLLEN*PPLLTP
Trigger: AGGAGTCAGTAAAGGAGGGCAGTTTTCCAAGAGAGG...GAAACAGAAAGAAATATACAGCACTGAGGTCTTCACCAGCAACAATGCAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR GCA 90 bp TTCTGTGAACACACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACTTGCCTGTAAGGTTCTCACTTaGCTGTGTAACTCATCTACG +
Preference number: 2 (lower is better)
Translates to: FCEHTRFSGDFSGDFELACKVLT*LCNSST
Trigger: CGTAGATGAGTTACACAGGCAAGTGAGAACCTTACA...GGCAAGTTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR CCA 90 bp AGTAAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCCTCTTCTCAATGTCATaGTCCACCTTTTGTCCAGGC +
Preference number: 2 (lower is better)
Translates to: SKLLCCFKSKFCPRSYRSLFSMS*STFCPG
Trigger: GCCTGGACAAAAGGTGGACCATGACATTGAGAAGAG...GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
3UTR-3UTR CCA 90 bp AGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTTCTCCTCTGCGAATATaGATGCTCCTTATAATTCGC +
Preference number: 2 (lower is better)
Translates to: RSQLASMPPFWNRKLLKISPLRI*MLLIIR
Trigger: GCGAATTATAAGGAGCATCCATATTCGCAGAGGAGA...AATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR CCA 90 bp ATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCAGACTCATCCTCATGCTaGAGTTCTGCATTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: MYPASEFCEHTRFSGDFSDSSSC*SSALLL
Trigger: CAGCAACAATGCAGAACTCCAGCATGAGGATGAGTC...TGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR CCA 90 bp GAGAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTGGACTTCTGAGAGGCTaGGAATTTCTTGTGGTGAGT +
Preference number: 2 (lower is better)
Translates to: EKQTIEGILHIVKRRNCIGLLRG*EFLVVS
Trigger: ACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCC...AATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CCA 90 bp ACAGTGTGTCTCAATGTAAAGGGTCATTTTTATTTCTGGTTACTGATCCTCTCCACTTTTTGCCCAGGCTaGAGTACAGTGGAGTGGTCT +
Preference number: 2 (lower is better)
Translates to: TVCLNVKGHFYFWLLILSTFCPG*STVEWS
Trigger: AGACCACTCCACTGTACTCCAGCCTGGGCAAAAAGT...GGAGAGGATCAGTAACCAGAAATAAAAATGACCCTTTACATTGAGACACACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000657597.1
3UTR-3UTR TCA 90 bp TCTCCTCTGCGAATATGGATGCTCCTTATAATTCGCTCTAAGAAGCCAATCTGCCTTGTAGTTCATCAGTaGGCCTTTGAATCTCTTCAT +
Preference number: 2 (lower is better)
Translates to: SPLRIWMLLIIRSKKPICLVVHQ*AFESLH
Trigger: ATGAAGAGATTCAAAGGCTCACTGATGAACTACAAG...GCAGATTGGCTTCTTAGAGCGAATTATAAGGAGCATCCATATTCGCAGAGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR TCA 90 bp TTTCAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTTTGTGCAAATTCTTGTaGAAGCTTCAAGACCTCACT +
Preference number: 2 (lower is better)
Translates to: FQLSCIESGAGANSGEVVLCKFL*KLQDLT
Trigger: AGTGAGGTCTTGAAGCTTTCACAAGAATTTGCACAA...AACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR TCA 90 bp ATTTCATTCACTACTTCGGATTCAAGGATGTCACTAATTGTTGTTTCCATCTGCGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 2 (lower is better)
Translates to: ISFTTSDSRMSLIVVSICACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...GCAGATGGAAACAACAATTAGTGACATCCTTGAATCCGAAGTAGTGAATGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
3UTR-3UTR TCA 90 bp TCCACCCATGACCCCTCAAATTGCATGTCTTTCTCACACTACAAGATACAATCAACTTTAGATTTCTCCTaGACCAGCTTTTCCTGTAGG +
Preference number: 2 (lower is better)
Translates to: STHDPSNCMSFSHYKIQSTLDFS*TSFSCR
Trigger: CCTACAGGAAAAGCTGGTTCAGGAGAAATCTAAAGT...TGATTGTATCTTGTAGTGTGAGAAAGACATGCAATTTGAGGGGTCATGGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666893.1
3UTR-3UTR TCA 90 bp ACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACTTGCCATTGCTTCTTTTAGCCAATCTGCTGTGTaGGACGAAGACTATTTTCCT +
Preference number: 2 (lower is better)
Translates to: TRFSGDFSGDFELAIASFSQSAV*DEDYFP
Trigger: AGGAAAATAGTCTTCGTCTCACACAGCAGATTGGCT...AAAAGAAGCAATGGCAAGTTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR TCA 90 bp GATGAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACTTCTACTTTCCTGACTaGACCCTGACTAAAGGATTA +
Preference number: 2 (lower is better)
Translates to: DETFVGASGQFLQILHFDFYFPD*TLTKGL
Trigger: TAATCCTTTAGTCAGGGTTCAGTCAGGAAAGTAGAA...GTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp TGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGACAGTTCTTCTACTTTCCTGACTaGACCCTGACTAAAGGATTA +
Preference number: 2 (lower is better)
Translates to: WIKGQTTDETFVGASGQFFYFPD*TLTKGL
Trigger: TAATCCTTTAGTCAGGGTTCAGTCAGGAAAGTAGAA...GAACTGTCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp AAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAAAACTATATCAGAAGTaGAGTATTCAGAGTGGTACG +
Preference number: 2 (lower is better)
Translates to: KGQTTDETFVGASGQFLQKLYQK*SIQSGT
Trigger: CGTACCACTCTGAATACTTCACTTCTGATATAGTTT...TTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp GCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATAAATAATTCATTATCGTaGGGACAGCATCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: ARESGEVPHTFKHLDLAINNSLS*GQHQAI
Trigger: AATGGCTTGATGCTGTCCTCACGATAATGAATTATT...TATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp AGGAAGCTCACAATCATGATGGTAGGTGAAGTGGGAGCAGACATGTCATATGGTGATTACATTTCAAGATaGGATTTGGAGGGGATAAAG +
Preference number: 2 (lower is better)
Translates to: RKLTIMMVGEVGADMSYGDYISR*DLEGIK
Trigger: CTTTATCCCCTCCAAATCTCATCTTGAAATGTAATC...ACCATATGACATGTCTGCTCCCACTTCACCTACCATCATGATTGTGAGCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp ACAGTACCAAGTATTGAAAACCAAGGTGGAGGAACTAAAATCTCACATACAACTAACACAGGGGACTTCTaGGAGGCTGGGAATTTCTTG +
Preference number: 2 (lower is better)
Translates to: TVPSIENQGGGTKISHTTNTGDF*EAGNFL
Trigger: CAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTT...AGTTGTATGTGAGATTTTAGTTCCTCCACCTTGGTTTTCAATACTTGGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR GCA 90 bp TCTAAGAAGCCAATCTGCTGTGTGAGACGAAGACTATTTTCCTGTAATTGCTTAAGACCAGATGCCAACTaGTTCTCTCTCTCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: SKKPICCVRRRLFSCNCLRPDAN*FSLSLS
Trigger: AGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCT...TAAGCAATTACAGGAAAATAGTCTTCGTCTCACACAGCAGATTGGCTTCTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp ATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCACATTTTCAGCTGAGTTaGATAGAATCTGGAGCCGGT +
Preference number: 2 (lower is better)
Translates to: MYPASEFCEHTRFSGDFSHFQLS*IESGAG
Trigger: ACCGGCTCCAGATTCTATGCAACTCAGCTGAAAATG...TGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp CGCAAATATTCTTCACGTAGAGCTTCCTTCTCTTGCTGTAGCTTAGATAGCTTCTGTAAGGTTCTCACTTaGCTGTGTAACTCATCTACG +
Preference number: 2 (lower is better)
Translates to: RKYSSRRASFSCCSLDSFCKVLT*LCNSST
Trigger: CGTAGATGAGTTACACAGGCAAGTGAGAACCTTACA...GAAGCTATCTAAGCTACAGCAAGAGAAGGAAGCTCTACGTGAAGAATATTTGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp CAACGGGGATTACATTTCAAGATGAGATTTGGAGGGGATAAAGAACCAAACCGTCATGACCCCTCAAATTaGATGTCTTTCTCACACTAC +
Preference number: 2 (lower is better)
Translates to: QRGLHFKMRFGGDKEPNRHDPSN*MSFSHY
Trigger: GTAGTGTGAGAAAGACATGCAATTTGAGGGGTCATG...ACGGTTTGGTTCTTTATCCCCTCCAAATCTCATCTTGAAATGTAATCCCCGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR GCA 90 bp CCTTTTCCTGAAAAACTAAGAAATGCCATATGTGAGGACATCATGTACATAGAGGACCCCAGAAAGCTATaGCTTCTCAAGCCAGCAATC +
Preference number: 2 (lower is better)
Translates to: PFPEKLRNAICEDIMYIEDPRKL*LLKPAI
Trigger: GATTGCTGGCTTGAGAAGGCATAGCTTTCTGGGGTC...CTCTATGTACATGATGTCCTCACATATGGCATTTCTTAGTTTTTCAGGAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000665176.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTACACTTACAAGTTGTaGACTTTTGGTAGATATGCT +
Preference number: 2 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMYTYKL*TFGRYA
Trigger: AGCATATCTACCAAAAGTGCACAACTTGTAAGTGTA...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CCA 90 bp ATTTCATTCACTACTTCGGATTCAAGGATGTCACTAATTGTTGTTTCCATCTGCCCAGTTCAGTCACTCTaGGCACCACTGTCATCTGAA +
Preference number: 2 (lower is better)
Translates to: ISFTTSDSRMSLIVVSICPVQSL*APLSSE
Trigger: TTCAGATGACAGTGGTGCCCAGAGTGACTGAACTGG...GCAGATGGAAACAACAATTAGTGACATCCTTGAATCCGAAGTAGTGAATGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR CCA 90 bp TTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTAGACTCTACTCTCCCCTaGTCCCTTCCAACTGTTTTG +
Preference number: 2 (lower is better)
Translates to: FSKRFGEENHPNYIRSEVDSTLP*SLPTVL
Trigger: CAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTC...TACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp GCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATATTTCAGCAAGAGATTTaGAGAGGAGAATCATCCAAA +
Preference number: 2 (lower is better)
Translates to: ARESGEVPHTFKHLDLAIFQQEI*RGESSK
Trigger: TTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAA...TATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp GATTACATTTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAACAGCCTCTCAAGCGCTaGGATTACAGTTGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: DYISARDLERRIIQTISEQPLKR*DYSCEP
Trigger: TGGCTCACAACTGTAATCCCAGCGCTTGAGAGGCTG...TTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAATGTAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp TATAGTCAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGCTTGTAGTTCATCAGTaGGCCTTTGAATCTCTTCAT +
Preference number: 2 (lower is better)
Translates to: YSQTQKLHSVRTVVTLKELVVHQ*AFESLH
Trigger: ATGAAGAGATTCAAAGGCTCACTGATGAACTACAAG...CTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667947.1
3UTR-3UTR TCA 90 bp ATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCAATTCTGGATTGTTGCTaGGAACAGGTCATTTCCAGT +
Preference number: 2 (lower is better)
Translates to: MYPASEFCEHTRFSGDFSILDCC*EQVISS
Trigger: ACTGGAAATGACCTGTTCTCAGCAACAATCCAGAAT...TGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR TCA 90 bp TCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATAGGGCAGACAACAGATaGGACATTTGTAGGAGCTTC +
Preference number: 2 (lower is better)
Translates to: SARDLERRIIQTISEVKYRADNR*DICRSF
Trigger: GAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCT...ATACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp GAGAAAAGAAGTTTAATTGGCTCATGGTTCTGCCGGCTATACAGAAAGCGTGGTAATAATTCATTATCGTaGGGACAGCATCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: EKRSLIGSWFCRLYRKRGNNSLS*GQHQAI
Trigger: AATGGCTTGATGCTGTCCTCACGATAATGAATTATT...ACCACGCTTTCTGTATAGCCGGCAGAACCATGAGCCAATTAAACTTCTTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR TCA 90 bp TGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGACAGTTCAATAATTCATTATCGTaGGGACAGCATCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: WIKGQTTDETFVGASGQFNNSLS*GQHQAI
Trigger: AATGGCTTGATGCTGTCCTCACGATAATGAATTATT...GAACTGTCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp GAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTCAGATATGCTTGGGCTTTaGCAAAAATTCCTAGCATGG +
Preference number: 2 (lower is better)
Translates to: EANHRRHTAYSQTQKLHSDMLGL*QKFLAW
Trigger: CCATGCTAGGAATTTTTGTCAAAGCCCAAGCATATC...TGAATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR TCA 90 bp GAGAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTGATATGCTTGGGCTTTaGCAAAAATTCCTAGCATGG +
Preference number: 2 (lower is better)
Translates to: EKQTIEGILHIVKRRNCIDMLGL*QKFLAW
Trigger: CCATGCTAGGAATTTTTGTCAAAGCCCAAGCATATC...AATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR GCA 90 bp GTAGATTTTCTTTATCTTGTAAGGTTCTCACTTGCCTGTGTAACTCATCTACGTAGTGTCAAGACCAGATaGCAACTGCTTCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: VDFLYLVRFSLACVTHLRSVKTR*QLLLSL
Trigger: GAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACT...ACGTAGATGAGTTACACAGGCAAGTGAGAACCTTACAAGATAAAGAAAATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp TTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATTTCAAGGCCTTCTCTaGAGTGTCAAGACCAGATGC +
Preference number: 2 (lower is better)
Translates to: FSKRFGEENHPNYIRSEVFQGLL*SVKTRC
Trigger: GCATCTGGTCTTGACACTGCAGAGAAGGCCTTGAAA...TACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658812.1
3UTR-3UTR GCA 90 bp TGCATTGTTGCTGGTGAAGACCTCAGTGCTGTATATTTCTTTCTGTTTCTTTGTCATTTTCAGCTGAGTTaGATAGAATCTGGAGCCGGT +
Preference number: 2 (lower is better)
Translates to: CIVAGEDLSAVYFFLFLCHFQLS*IESGAG
Trigger: ACCGGCTCCAGATTCTATGCAACTCAGCTGAAAATG...ACAAAGAAACAGAAAGAAATATACAGCACTGAGGTCTTCACCAGCAACAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp ATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCATTTAAGTCCAAGTTCTaGCCTCGTTCATATCGAAGC +
Preference number: 2 (lower is better)
Translates to: MYPASEFCEHTRFSGDFSFKSKF*PRSYRS
Trigger: GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAA...TGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp TTTCAAACAACCAGATCTCATGAAGAGCACACTCACTATTATGAGGACAGCACCAAGCTGTTCTTGCACTaGTATAAAGAAATACCCGAG +
Preference number: 2 (lower is better)
Translates to: FQTTRSHEEHTHYYEDSTKLFLH*YKEIPE
Trigger: CTCGGGTATTTCTTTATAGCAGTGCAAGAACAGCTT...GGTGCTGTCCTCATAATAGTGAGTGTGCTCTTCATGAGATCTGGTTGTTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp TTAAAGCCAGAATTTCCTCATCCAGTCTCTGATTTTGTTCCTTTGCTTTCTGTACTCTTCTCAATGTCATaGTCCACCTTTTGTCCAGGC +
Preference number: 2 (lower is better)
Translates to: LKPEFPHPVSDFVPLLSVLFSMS*STFCPG
Trigger: GCCTGGACAAAAGGTGGACCATGACATTGAGAAGAG...TACAGAAAGCAAAGGAACAAAATCAGAGACTGGATGAGGAAATTCTGGCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR CCA 90 bp TTAATTGGCTTACAGATATGCAGACTATACAGGAAGCATGGTATCGGCATCTGGTTTAGCACTAGCAGATaGATAAAAGGGCAGACAACA +
Preference number: 2 (lower is better)
Translates to: LIGLQICRLYRKHGIGIWFSTSR*IKGQTT
Trigger: TGTTGTCTGCCCTTTTATCCATCTGCTAGTGCTAAA...CCAGATGCCGATACCATGCTTCCTGTATAGTCTGCATATCTGTAAGCCAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp GATACAGTGGTAGTACAGGCATTAGGTAAACATCACAATTCCAAAAGGGAGAAACTTTTCCCATTGTCTTaGATACTAGCACTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: DTVVVQALGKHHNSKREKLFPLS*ILALGS
Trigger: GGAGCCAAGTGCTAGTATCCAAGACAATGGGAAAAG...TTTCTCCCTTTTGGAATTGTGATGTTTACCTAATGCCTGTACTACCACTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp AAGAAGATTCAAATAATTCATGTAGAGAAAATGACCCCAGAAAGCTATGCCTTCCATGACTCTCAGGCATaGCTGACAGTCCATCTCAGA +
Preference number: 2 (lower is better)
Translates to: KKIQIIHVEKMTPESYAFHDSQA*LTVHLR
Trigger: TCTGAGATGGACTGTCAGCCATGCCTGAGAGTCATG...GAAGGCATAGCTTTCTGGGGTCATTTTCTCTACATGAATTATTTGAATCTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
3UTR CAA 90 bp TTAAGCCCCACCTCCAATGATGGGGATTACATTTCAGCAAGAGATTaGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATTCA +
Preference number: 2 (lower is better)
Translates to: LSPTSNDGDYISARD*ERRIIQTISEVKYS
Trigger: TGAATACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAATGTAATCCCCATCATTGGAGGTGGGGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp TGCATTGTTGCTGGTGAAGACCTCAGTGCTGTATATTTCTTTCTGTTTCTTTGTTTGAAGACTCTTGGGTaGTATCCATTTGGGATCTGT +
Preference number: 2 (lower is better)
Translates to: CIVAGEDLSAVYFFLFLCLKTLG*YPFGIC
Trigger: ACAGATCCCAAATGGATATCACCCAAGAGTCTTCAA...ACAAAGAAACAGAAAGAAATATACAGCACTGAGGTCTTCACCAGCAACAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
3UTR-3UTR TCA 90 bp AGCTTCAATAATCGCAAATATTCTTCACGTAGAGCTTCCTTCTCTTGCTGTAGCTTGTGCAAATTCTTGTaGAAGCTTCAAGACCTCACT +
Preference number: 2 (lower is better)
Translates to: SFNNRKYSSRRASFSCCSLCKFL*KLQDLT
Trigger: AGTGAGGTCTTGAAGCTTTCACAAGAATTTGCACAA...GCTACAGCAAGAGAAGGAAGCTCTACGTGAAGAATATTTGCGATTATTGAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR TCA 90 bp AGTAAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTTGTGCAAATTCTTGTaGAAGCTTCAAGACCTCACT +
Preference number: 2 (lower is better)
Translates to: SKLLCCFKSKFCPRSYRSLCKFL*KLQDLT
Trigger: AGTGAGGTCTTGAAGCTTTCACAAGAATTTGCACAA...GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR TCA 90 bp GATTACATTTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAATCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 2 (lower is better)
Translates to: DYISARDLERRIIQTISESLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...TTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp ATTTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGGAGGTGGCTTCTCTGTaGTTTCTGAACTTCTGGATT +
Preference number: 2 (lower is better)
Translates to: ISARDLERRIIQTISEVKEVASL*FLNFWI
Trigger: AATCCAGAAGTTCAGAAATCACAGAGAAGCCACCTC...CTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp TTAATTGGCTTACAGATATGCAGACTATACAGGAAGCATGGTATCGGCATCTGGAAACTATATCAGAAGTaGAGTATTCAGAGTGGTACG +
Preference number: 2 (lower is better)
Translates to: LIGLQICRLYRKHGIGIWKLYQK*SIQSGT
Trigger: CGTACCACTCTGAATACTTCACTTCTGATATAGTTT...CCAGATGCCGATACCATGCTTCCTGTATAGTCTGCATATCTGTAAGCCAATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp TATCCATGTAAAGTACCCTGCTCTGGATGGAAGATATCGTCCATTTGTTGCTGTAAGAAATGCCATATGTaGGGACATCATGTACATAGA +
Preference number: 2 (lower is better)
Translates to: YPCKVPCSGWKISSICCCKKCHM*GHHVHR
Trigger: TCTATGTACATGATGTCCTCACATATGGCATTTCTT...ACAGCAACAAATGGACGATATCTTCCATCCAGAGCAGGGTACTTTACATGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp GATTACATTTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGAGAGAGCGGAGAGGTaGCACACACTTTTAAACATC +
Preference number: 2 (lower is better)
Translates to: DYISARDLERRIIQTISEERAER*HTLLNI
Trigger: GATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTC...TTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR GCA 90 bp AGAATCATCCAAACTATATCAGAAGTGAAGTATTCAGAGTGGTACGAGTATAGAGAGAGAGCGGAGAGGTaGCACACACTTTTAAACATC +
Preference number: 2 (lower is better)
Translates to: RIIQTISEVKYSEWYEYRERAER*HTLLNI
Trigger: GATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTC...TCTATACTCGTACCACTCTGAATACTTCACTTCTGATATAGTTTGGATGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR GCA 90 bp GATACAGTGGTAGTACAGGCATTAGGTAAACATCACAATTCCAAAAGGGAGAAAGCCACATGGCCAGGCTaGAAATTTGCTGAATTTTTA +
Preference number: 2 (lower is better)
Translates to: DTVVVQALGKHHNSKREKATWPG*KFAEFL
Trigger: TAAAAATTCAGCAAATTTGCAGCCTGGCCATGTGGC...TTTCTCCCTTTTGGAATTGTGATGTTTACCTAATGCCTGTACTACCACTGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR GCA 90 bp GTAGATTTTCTTTATCTTGTAAGGTTCTCACTTGCCTGTGTAACTCATCTACGTTCTCCAGATGATGGATaGAGAGTTCCTCTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: VDFLYLVRFSLACVTHLRSPDDG*RVPLSL
Trigger: AAGAGACAGAGGAACTCTGCATCCATCATCTGGAGA...ACGTAGATGAGTTACACAGGCAAGTGAGAACCTTACAAGATAAAGAAAATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR CCA 90 bp GATTACATTTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGAGTTGCATAGAATCTaGAGCCGGTGCAAATTCTGG +
Preference number: 2 (lower is better)
Translates to: DYISARDLERRIIQTISEELHRI*SRCKFW
Trigger: CCAGAATTTGCACCGGCTCCAGATTCTATGCAACTC...TTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAATGTAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp ACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACTTGCCATTGCTTCTTTTTTCTCTGACAATTCCTaGTTGCTTTTGACATGCTCA +
Preference number: 2 (lower is better)
Translates to: TRFSGDFSGDFELAIASFFSDNS*LLLTCS
Trigger: TGAGCATGTCAAAAGCAACCAGGAATTGTCAGAGAA...AAAAGAAGCAATGGCAAGTTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR CCA 90 bp CATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGAGATAGATTTGGTAGATATGCTTaGGCTTTGACAAAAATTCCT +
Preference number: 2 (lower is better)
Translates to: HSVRTVVTLKEEEGCRDRFGRYA*ALTKIP
Trigger: AGGAATTTTTGTCAAAGCCCAAGCATATCTACCAAA...TCTATCTCTACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR TCA 90 bp AGTAAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTTGTCAATTTCTAGTTaGGCCTTCTTAAGTGCAGAA +
Preference number: 2 (lower is better)
Translates to: SKLLCCFKSKFCPRSYRSLSISS*AFLSAE
Trigger: TTCTGCACTTAAGAAGGCTCAACTAGAAATTGACAA...GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000664418.1
3UTR-3UTR TCA 90 bp TCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAATGTGATTTAATGCTCTaGGTGTGTTTAAGTACTTCC +
Preference number: 2 (lower is better)
Translates to: SEFCEHTRFSGDFSGDFECDLML*VCLSTS
Trigger: GGAAGTACTTAAACACACTCAGAGCATTAAATCACA...TTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
3UTR-3UTR TCA 90 bp ATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCAAACTCATCTACGTTCTaGTATAGAAGTTTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: MYPASEFCEHTRFSGDFSNSSTF*YRSFLF
Trigger: GAAGAGGAAACTTCTATATCAGAACGTAGATGAGTT...TGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR TCA 90 bp GATACAGTGGTAGTACAGGCATTAGGTAAACATCACAATTCCAAAAGGGAGAAATTCTACTTTCCTGACTaGACCCTGACTAAAGGATTA +
Preference number: 2 (lower is better)
Translates to: DTVVVQALGKHHNSKREKFYFPD*TLTKGL
Trigger: TAATCCTTTAGTCAGGGTTCAGTCAGGAAAGTAGAA...TTTCTCCCTTTTGGAATTGTGATGTTTACCTAATGCCTGTACTACCACTGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp GATTACATTTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGAGGTGGCTTCTCTGTaGTTTCTGAACTTCTGGATT +
Preference number: 2 (lower is better)
Translates to: DYISARDLERRIIQTISEEVASL*FLNFWI
Trigger: AATCCAGAAGTTCAGAAATCACAGAGAAGCCACCTC...TTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAATGTAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp AGTAAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCAATAATTCATTATCGTaGGGACAGCATCAAGCCATT +
Preference number: 2 (lower is better)
Translates to: SKLLCCFKSKFCPRSYRSNNSLS*GQHQAI
Trigger: AATGGCTTGATGCTGTCCTCACGATAATGAATTATT...GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
3UTR-3UTR TCA 90 bp GAAAGCTTCAAGACCTTTGTTTCTAATTCAGAATTCTCTCTTTGTAACAGGTCAATGGTCTTTGCTTTCTaGTTCCCCTGGAAGATTGTG +
Preference number: 2 (lower is better)
Translates to: ESFKTFVSNSEFSLCNRSMVFAF*FPWKIV
Trigger: CACAATCTTCCAGGGGAATCAGAAAGCAAAGACCAT...TGACCTGTTACAAAGAGAGAATTCTGAATTAGAAACAAAGGTCTTGAAGCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656470.1
3UTR-3UTR GCA 90 bp ACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACTTGCCATTGCTTCTTTTGATCTGGTCCTGTATTaGCTTCTCCTTTTCTATTTT +
Preference number: 2 (lower is better)
Translates to: TRFSGDFSGDFELAIASFDLVLY*LLLFYF
Trigger: AAAATAGAAAAGGAGAAGGCAATACAGGACCAGATC...AAAAGAAGCAATGGCAAGTTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR GCA 90 bp CATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTCAGTCAGGACATACACTTACAAGTTGTaGACTTTTGGTAGATATGCT +
Preference number: 2 (lower is better)
Translates to: HRRHTAYSQTQKLHSVRTYTYKL*TFGRYA
Trigger: AGCATATCTACCAAAAGTGCACAACTTGTAAGTGTA...TGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CCA 90 bp GAAGCCACATTTATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCAAGTTTTGAAGACTCTTaGGTGATATCCATTTGGGAT +
Preference number: 2 (lower is better)
Translates to: EATFMYPASEFCEHTRFSSFEDS*VISIWD
Trigger: ATCCCAAATGGATATCACCCAAGAGTCTTCAAAACT...TGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACATAAATGTGGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
3UTR-3UTR CCA 90 bp GAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATAATTCATTATCGTGAGTTTAGCACTAGCAGATaGATAAAAGGGCAGACAACA +
Preference number: 2 (lower is better)
Translates to: EVPHTFKHLDLAIIHYREFSTSR*IKGQTT
Trigger: TGTTGTCTGCCCTTTTATCCATCTGCTAGTGCTAAA...CTCACGATAATGAATTATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp AGTAAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCGTGAAGTATTCAGAGTaGTACGAGTATAGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: SKLLCCFKSKFCPRSYRSVKYSE*YEYRKK
Trigger: CTTCTTTCTATACTCGTACCACTCTGAATACTTCAC...GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp TATAGTCAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGTTTGGTAGATATGCTTaGGCTTTGACAAAAATTCCT +
Preference number: 2 (lower is better)
Translates to: YSQTQKLHSVRTVVTLKEFGRYA*ALTKIP
Trigger: AGGAATTTTTGTCAAAGCCCAAGCATATCTACCAAA...CTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR TCA 90 bp ACAGTGTGTCTCAATGTAAAGGGTCATTTTTATTTCTGGTTACTGATCCTCTCCAATGGGAAAGAATGTTaGATTAACCCTACATGTGCT +
Preference number: 2 (lower is better)
Translates to: TVCLNVKGHFYFWLLILSNGKEC*INPTCA
Trigger: AGCACATGTAGGGTTAATTCAACATTCTTTCCCATT...GGAGAGGATCAGTAACCAGAAATAAAAATGACCCTTTACATTGAGACACACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657597.1
3UTR-3UTR TCA 90 bp TTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCATTTTCATTGTCAATTTCTAGTTaGGCCTTCTTAAGTGCAGAA +
Preference number: 2 (lower is better)
Translates to: LCCFKSKFCPRSYRSSFSLSISS*AFLSAE
Trigger: TTCTGCACTTAAGAAGGCTCAACTAGAAATTGACAA...TGAAAATGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000664418.1
3UTR-3UTR TCA 90 bp TTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATTCAGAGTGGTATTCTACTTTCCTGACTaGACCCTGACTAAAGGATTA +
Preference number: 2 (lower is better)
Translates to: FGEENHPNYIRSEVFRVVFYFPD*TLTKGL
Trigger: TAATCCTTTAGTCAGGGTTCAGTCAGGAAAGTAGAA...TACCACTCTGAATACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR TCA 90 bp AAGATCTTCAACTTAATTAGCAGTCAGGGAATACCAGTTAAAGCCACACTTAAAGATATGCTTGGGCTTTaGCAAAAATTCCTAGCATGG +
Preference number: 2 (lower is better)
Translates to: KIFNLISSQGIPVKATLKDMLGL*QKFLAW
Trigger: CCATGCTAGGAATTTTTGTCAAAGCCCAAGCATATC...TTTAAGTGTGGCTTTAACTGGTATTCCCTGACTGCTAATTAAGTTGAAGATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CCA 90 bp GTGCCACACACTTTTAAACATCTAGATCTCGCAATAATTCATTATCGTGAGGACTTTCAGCAAGAGATTTaGAGAGGAGAATCATCCAAA +
Preference number: 2 (lower is better)
Translates to: VPHTFKHLDLAIIHYREDFQQEI*RGESSK
Trigger: TTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAA...GTCCTCACGATAATGAATTATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CCA 90 bp GAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTCATTTGGTAGATATGCTTaGGCTTTGACAAAAATTCCT +
Preference number: 2 (lower is better)
Translates to: EANHRRHTAYSQTQKLHSFGRYA*ALTKIP
Trigger: AGGAATTTTTGTCAAAGCCCAAGCATATCTACCAAA...TGAATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CCA 90 bp GAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTCACGTCCATCAGTAGAATaGATAAATTGCAGTATGTTT +
Preference number: 2 (lower is better)
Translates to: EANHRRHTAYSQTQKLHSRPSVE*INCSMF
Trigger: AAACATACTGCAATTTATCCATTCTACTGATGGACG...TGAATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR TCA 90 bp CCTTTTCCTGAAAAACTAAGAAATGCCATATGTGAGGACATCATGTACATAGAGAACTCATCTACGTTCTaGTATAGAAGTTTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: PFPEKLRNAICEDIMYIENSSTF*YRSFLF
Trigger: GAAGAGGAAACTTCTATATCAGAACGTAGATGAGTT...CTCTATGTACATGATGTCCTCACATATGGCATTTCTTAGTTTTTCAGGAAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR TCA 90 bp CCTTCCACTTATGAGCCTGTAAAAATCAAAATAAGTCATTTACTCCCAAGATACAGGCTGCAAATTTGCTaGATTTTTATGCTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: PSTYEPVKIKISHLLPRYRLQIC*IFMLCF
Trigger: GAAGCAGAGCATAAAAATTCAGCAAATTTGCAGCCT...GTATCTTGGGAGTAAATGACTTATTTTGATTTTTACAGGCTCATAAGTGGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CCA 90 bp ATTTCATTCACTACTTCGGATTCAAGGATGTCACTAATTGTTGTTTCCATCTGCAGTTTTGAAGACTCTTaGGTGATATCCATTTGGGAT +
Preference number: 2 (lower is better)
Translates to: ISFTTSDSRMSLIVVSICSFEDS*VISIWD
Trigger: ATCCCAAATGGATATCACCCAAGAGTCTTCAAAACT...GCAGATGGAAACAACAATTAGTGACATCCTTGAATCCGAAGTAGTGAATGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
3UTR-3UTR CCA 90 bp GTAGATTTTCTTTATCTTGTAAGGTTCTCACTTGCCTGTGTAACTCATCTACGTGTGAAGTATTCAGAGTaGTACGAGTATAGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: VDFLYLVRFSLACVTHLRVKYSE*YEYRKK
Trigger: CTTCTTTCTATACTCGTACCACTCTGAATACTTCAC...ACGTAGATGAGTTACACAGGCAAGTGAGAACCTTACAAGATAAAGAAAATCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
3UTR-3UTR GCA 90 bp TTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTAAGTAAGCTATTATGTTaGTTTAAGTCCAAGTTCTGC +
Preference number: 2 (lower is better)
Translates to: FSKRFGEENHPNYIRSEVSKLLC*FKSKFC
Trigger: GCAGAACTTGGACTTAAAGCAACATAATAGCTTACT...TACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
3UTR-3UTR GCA 90 bp TTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTAAACTTCTGTTGGGCATaGTTTAGTTCAATCTTTATC +
Preference number: 2 (lower is better)
Translates to: FSKRFGEENHPNYIRSEVNFCWA*FSSIFI
Trigger: GATAAAGATTGAACTAAAGCATGCCCAACAGAAGTT...TACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
3UTR-3UTR GCA 90 bp AAGATCTTCAACTTAATTAGCAGTCAGGGAATACCAGTTAAAGCCACACTTAAATACACTTACAAGTTGTaGACTTTTGGTAGATATGCT +
Preference number: 2 (lower is better)
Translates to: KIFNLISSQGIPVKATLKYTYKL*TFGRYA
Trigger: AGCATATCTACCAAAAGTGCACAACTTGTAAGTGTA...TTTAAGTGTGGCTTTAACTGGTATTCCCTGACTGCTAATTAAGTTGAAGATCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CCA 90 bp AAGATCTTCAACTTAATTAGCAGTCAGGGAATACCAGTTAAAGCCACACTTAAATTTGGTAGATATGCTTaGGCTTTGACAAAAATTCCT +
Preference number: 2 (lower is better)
Translates to: KIFNLISSQGIPVKATLKFGRYA*ALTKIP
Trigger: AGGAATTTTTGTCAAAGCCCAAGCATATCTACCAAA...TTTAAGTGTGGCTTTAACTGGTATTCCCTGACTGCTAATTAAGTTGAAGATCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CAA 90 bp AGCCACAGCTGGAGCTGTAGTAGCTGGGATTCAGGGAGCAGTGTCCTGAGGCTGTGTATCTGGGGTCCTTaGAGCCACAGCTGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: SHSWSCSSWDSGSSVLRLCIWGP*SHSWSC
Trigger: ACAGCTCCAGCTGTGGCTCAAAGGACCCCAGATACA...CAGCCTCAGGACACTGCTCCCTGAATCCCAGCTACTACAGCTCCAGCTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 72 bp TGGGGTCCTTTGAGCCACAGCTGGAGCTGTAGTAGCTaGGATTCAGGGAGCAGTGTCCTGAGGCTGAGCAGA +
Preference number: 3 (lower is better)
Translates to: WGPLSHSWSCSS*DSGSSVLRLSR
Trigger: TCTGCTCAGCCTCAGGACACTGCTCCCTGAATCCCAGCTACTACAGCTCCAGCTGTGGCTCAAAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 72 bp GCTTGCATCCTCTGGACAGGCAGCCTGAGCTGTATCTaGGGTCCTTTGAGCCACAGCTGGAGCTGTAGTAGC +
Preference number: 3 (lower is better)
Translates to: ACILWTGSLSCI*GPLSHSWSCSS
Trigger: GCTACTACAGCTCCAGCTGTGGCTCAAAGGACCCCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 72 bp GCCTGTGGATCTACCATTCTGGAGTCTGGAGGGCAGTaGCCCACTTCTTATAGCTCCACTAGGCAGTGCCCC +
Preference number: 3 (lower is better)
Translates to: ACGSTILESGGQ*PTSYSSTRQCP
Trigger: GGGGCACTGCCTAGTGGAGCTATAAGAAGTGGGCCACTGCCCTCCAGACTCCAGAATGGTAGATCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 72 bp CTGAGGCTTTCCCAGGTACAGGATGCAAGCTGCCTGTaGATCTACCATTCTGGAGTCTGGAGGGCAGTGGCC +
Preference number: 3 (lower is better)
Translates to: LRLSQVQDASCL*IYHSGVWRAVA
Trigger: GGCCACTGCCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCATCCTGTACCTGGGAAAGCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 72 bp GGGTGTCTGAGGCTTTCCCAGGTACAGGATGCAAGCTaGCTGTGGATCTACCATTCTGGAGTCTGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: GCLRLSQVQDAS*LWIYHSGVWRA
Trigger: TGCCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCATCCTGTACCTGGGAAAGCCTCAGACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 72 bp GTGGAGGTCCTGGGAGGGTGGTGTGATCAGAGGTCATaGAAGTTCCACATCCCTTTCCACATGCCTTGCCCT +
Preference number: 3 (lower is better)
Translates to: VEVLGGWCDQRS*KFHIPFHMPCP
Trigger: AGGGCAAGGCATGTGGAAAGGGATGTGGAACTTCCATGACCTCTGATCACACCACCCTCCCAGGACCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CAA 90 bp GAAAGCGTGGTGCCAGCATCTGCTCAGCTTCTGGTGAGGGCCTCAGGAAGCTCACATCATCTGAAATCTTaGTGGGAGCTGCCAAGCCTC +
Preference number: 3 (lower is better)
Translates to: ESVVPASAQLLVRASGSSHHLKS*WELPSL
Trigger: GAGGCTTGGCAGCTCCCACAAAGATTTCAGATGATG...TGAGCTTCCTGAGGCCCTCACCAGAAGCTGAGCAGATGCTGGCACCACGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 72 bp CAGAAAGCGTGGTGCCAGCATCTGCTCAGCTTCTGGTaGGGGCCTCAGGAAGCTCACAATCATGATGGTAGG +
Preference number: 3 (lower is better)
Translates to: QKAWCQHLLSFW*GPQEAHNHDGR
Trigger: CCTACCATCATGATTGTGAGCTTCCTGAGGCCCTCACCAGAAGCTGAGCAGATGCTGGCACCACGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 72 bp CTCAGCTCACTGAAACTTCTACCTCTTGGGTTCAGGTaGTTCTCGAGCCTCAGCCTCCCGCATAGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: LSSLKLLPLGFR*FSSLSLPHSRD
Trigger: GTCCCTGCTATGCGGGAGGCTGAGGCTCGAGAATCACCTGAACCCAAGAGGTAGAAGTTTCAGTGAGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657597.1
3UTR GCA 72 bp TGGAGCTGGGTGTCTGAGGCTTTCCCAGGTACAGGATaGAAGCTGCCTGTGGATCTACCATTCTGGAGTCTG +
Preference number: 3 (lower is better)
Translates to: WSWVSEAFPGTG*KLPVDLPFWSL
Trigger: CAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCATCCTGTACCTGGGAAAGCCTCAGACACCCAGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp TGTGGCAGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTGCAAATTCTCCACTTaGACGCTGCAGGAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: CGRVLPGHPGYLSHHLKSCKFST*TLQEVA
Trigger: AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCA...AGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCTGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp GCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGACTGCAAATTCTCCACTTaGACGCTGCAGGAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: ADYTGSMVSASGQLLVRDCKFST*TLQEVA
Trigger: AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCA...GTCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CAA 90 bp TCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGGAGCTACCAAGGCTTATGGCTaGCATCCTCTGGACAGGCAG +
Preference number: 3 (lower is better)
Translates to: SAWAPRLSLTSSEIFVGATKAYG*HPLDRQ
Trigger: CTGCCTGTCCAGAGGATGCAAGCCATAAGCCTTGGT...AGCTCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 72 bp CAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTaGGGGACTCAGGAAGCTAACAATCATGGTGGTAGG +
Preference number: 3 (lower is better)
Translates to: QEAWYRHLVSFW*GTQEANNHGGR
Trigger: CCTACCACCATGATTGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR TCA 72 bp TTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTaGAATCTTTGTGGGAGCTGCCAAGCCTCCTTCACT +
Preference number: 3 (lower is better)
Translates to: FCLGTQAISHII*NLCGSCQASFT
Trigger: AGTGAAGGAGGCTTGGCAGCTCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 72 bp TTTAGTACCACATGGAAGCCACCAAGGCTTATGGCTTaGATCCTCTGGACAGGCAGCCTGAGCTGTATCTGG +
Preference number: 3 (lower is better)
Translates to: FSTTWKPPRLMA*ILWTGSLSCIW
Trigger: CCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCATAAGCCTTGGTGGCTTCCATGTGGTACTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp GAAAGCGTGGTGCCAGCATCTGCTCAGCTTCTGGTGAGGGCCTCAGGAAGCTCAGAACTTCTGGATTTATaGAAAGCTAGCAGCAGTCCT +
Preference number: 3 (lower is better)
Translates to: ESVVPASAQLLVRASGSSELLDL*KASSSP
Trigger: AGGACTGCTGCTAGCTTTCAATAAATCCAGAAGTTC...TGAGCTTCCTGAGGCCCTCACCAGAAGCTGAGCAGATGCTGGCACCACGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp AAATTCCGCCTCCCAGGTTCAAGCCATCTTCCCCACCTCAGCCTCCTGAATAGCGTAACGCTCCGCTTCTaGGTACCAATTTTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: KFRLPGSSHLPHLSLLNSVTLRF*VPIFCV
Trigger: GACACAGAAAATTGGTACCAAGAAGCGGAGCGTTAC...GCTATTCAGGAGGCTGAGGTGGGGAAGATGGCTTGAACCTGGGAGGCGGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp CTACCATTCTGGAGTCTGGAGGGCAGTGGCCCACTTCTTATAGCTCCACTAGGCATTCTGGTGAAGTTGTaGTACTTCCCCTTGCTGGTT +
Preference number: 3 (lower is better)
Translates to: LPFWSLEGSGPLLIAPLGILVKL*YFPLLV
Trigger: AACCAGCAAGGGGAAGTACAACAACTTCACCAGAAT...GCCTAGTGGAGCTATAAGAAGTGGGCCACTGCCCTCCAGACTCCAGAATGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666893.1
3UTR-3UTR CAA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTGCAAATTCTCCACTTaGACGCTGCAGGAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGCKFST*TLQEVA
Trigger: AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCA...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp AGGCTTATGGCTTGCATCCTCTGGACAGGCAGCCTGAGCTGTATCTGGGGTCCTTACCCAGTTCCAAACTaGCTTCCACATTTTCAGGTA +
Preference number: 3 (lower is better)
Translates to: RLMACILWTGSLSCIWGPYPVPN*LPHFQV
Trigger: TACCTGAAAATGTGGAAGCAAGTTTGGAACTGGGTA...AGGACCCCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCATAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp TATGTGGAGGTCCTGGGAGGGTGGTGTGATCAGAGGTCATGGAAGTTCCACATCTCTCTGAGATTGCCTTaGAGGCCTTTTCCCATTGTC +
Preference number: 3 (lower is better)
Translates to: YVEVLGGWCDQRSWKFHISLRLP*RPFPIV
Trigger: GACAATGGGAAAAGGCCTCAAAGGCAATCTCAGAGA...GATGTGGAACTTCCATGACCTCTGATCACACCACCCTCCCAGGACCTCCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CAA 90 bp GAAGTTCCACATCCCTTTCCACATGCCTTGCCCTATGCATCTCTTCCATCTGGCAAGCCTCCTTCACTCTaGCATTCTATGTGCCCACAG +
Preference number: 3 (lower is better)
Translates to: EVPHPFPHALPYASLPSGKPPSL*HSMCPQ
Trigger: CTGTGGGCACATAGAATGCAAGAGTGAAGGAGGCTT...GCCAGATGGAAGAGATGCATAGGGCAAGGCATGTGGAAAGGGATGTGGAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR TCA 72 bp TCTCAAGCCAGCAATCCAGGACTAGTTAGGCAGCCATaGCTCTCAGGCATGGCTGACAGTCCATCTCAGATA +
Preference number: 3 (lower is better)
Translates to: SQASNPGLVRQP*LSGMADSPSQI
Trigger: TATCTGAGATGGACTGTCAGCCATGCCTGAGAGTCATGGCTGCCTAACTAGTCCTGGATTGCTGGCTTGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
3UTR TCA 72 bp AGGCTGAGGAGAGAGGATCACTTAAGCATGGGAGGTTaGGGCTGCATGAGCAGTAATCAAACCACTGCACTC +
Preference number: 3 (lower is better)
Translates to: RLRREDHLSMGG*GCMSSNQTTAL
Trigger: GAGTGCAGTGGTTTGATTACTGCTCATGCAGCCTCAACCTCCCATGCTTAAGTGATCCTCTCTCCTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657597.1
3UTR CCA 72 bp TTCTCTGTGGCCTCAGGAACTGACTCATCCTCATGCTaGAGTTCTGCATTGTTGCTGGTGAAGACCTCAGTG +
Preference number: 3 (lower is better)
Translates to: FSVASGTDSSSC*SSALLLVKTSV
Trigger: CACTGAGGTCTTCACCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR CCA 72 bp AGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTaGAACAGGAAACTCCTTAAGATTCTCTCCTCTGCG +
Preference number: 3 (lower is better)
Translates to: RERSQLASMPPF*NRKLLKILSSA
Trigger: CGCAGAGGAGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR CCA 72 bp CTAGTTTCTCTAGCAAGTAGTTGCTCCATACCCTGCTaGGATTCTTTCTCTGCCACATGGCCAGGCTGCAAA +
Preference number: 3 (lower is better)
Translates to: LVSLASSCSIPC*DSFSATWPGCK
Trigger: TTTGCAGCCTGGCCATGTGGCAGAGAAAGAATCCCAGCAGGGTATGGAGCAACTACTTGCTAGAGAAACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 72 bp TCTTGCATTCTATGTGCCCACAGGTTTAGTACCACATaGAAGCCACCAAGGCTTATGGCTTGCATCCTCTGG +
Preference number: 3 (lower is better)
Translates to: SCILCAHRFSTT*KPPRLMACILW
Trigger: CCAGAGGATGCAAGCCATAAGCCTTGGTGGCTTCCATGTGGTACTAAACCTGTGGGCACATAGAATGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp CTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGCTCTCTCTCTCTCTTTaGACCACTCACTTTCAAACA +
Preference number: 3 (lower is better)
Translates to: LWPQELTHPHAGVLHCCWLSLSL*TTHFQT
Trigger: TGTTTGAAAGTGAGTGGTCAAAAGAGAGAGAGAGAG...CCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
3UTR-3UTR CAA 90 bp CAACGGGGATTACATTTCAAGATGAGATTTGGAGGGGATAAAGAACCAAACCGTCATGATCATGGCTCATaGCAACCCCGACCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: QRGLHFKMRFGGDKEPNRHDHGS*QPRPPS
Trigger: GCTGGGAGGTCGGGGTTGCAATGAGCCATGATCATG...ACGGTTTGGTTCTTTATCCCCTCCAAATCTCATCTTGAAATGTAATCCCCGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 72 bp AAGGCCTTCTCTGCAGTGTCAAGACCAGATGCCAACTaGTTCTCTCTCTCTCTCTCTTTTGACCACTCACTT +
Preference number: 3 (lower is better)
Translates to: KAFSAVSRPDAN*FSLSLSFDHSL
Trigger: AAGTGAGTGGTCAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
3UTR CCA 72 bp TTGTTTCCATCTGCTCAGAGTGTTTCCACTTCTCTGTaGCCTCAGGAACTGACTCATCCTCATGCTGGAGTT +
Preference number: 3 (lower is better)
Translates to: LFPSAQSVSTSL*PQELTHPHAGV
Trigger: AACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGAGAAGTGGAAACACTCTGAGCAGATGGAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR CCA 72 bp ATATGCAGACTATACAGGAAGCATGGTATCGGCATCTaGTCAGCTTCTGGTGAGGGACTCAGGAAGCTAACA +
Preference number: 3 (lower is better)
Translates to: ICRLYRKHGIGI*SASGEGLRKLT
Trigger: TGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000666893.1
ENST00000671281.1
3UTR CCA 72 bp CACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTaGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTA +
Preference number: 3 (lower is better)
Translates to: HPGYLSHHLKSL*ELPSLLHSCIL
Trigger: TAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp CCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCACAGGTTTAGTACCACATGGCAAATTCTGGTGAAGTaGTTGTACTTCCCCTTGCTG +
Preference number: 3 (lower is better)
Translates to: PSLLHSCILCAHRFSTTWQILVK*LYFPLL
Trigger: CAGCAAGGGGAAGTACAACAACTTCACCAGAATTTG...CCATGTGGTACTAAACCTGTGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666893.1
3UTR TCA 72 bp TCAGGATGTAGGCAAGTTGCCAGGGGTACCATTATATaGTTAGAGGGTTGGAACTTTCAGGCTCATCCAGAC +
Preference number: 3 (lower is better)
Translates to: SGCRQVARGTII*LEGWNFQAHPD
Trigger: GTCTGGATGAGCCTGAAAGTTCCAACCCTCTAATCATATAATGGTACCCCTGGCAACTTGCCTACATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR GCA 72 bp GCCCTCGTTCATATCGAAGCTCATTTTCAGCTGAGTTaGATAGAATCTGGAGCCGGTGCAAATTCTGGTGAA +
Preference number: 3 (lower is better)
Translates to: ALVHIEAHFQLS*IESGAGANSGE
Trigger: TTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTGAAAATGAGCTTCGATATGAACGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
ENST00000670783.1
3UTR GCA 72 bp CTTTCTGTTTCTTTGTTGGAGGGAGAGAAGCCAGCTTaGCTCTATGCCACCATTTTGGAACAGGAAACTCCT +
Preference number: 3 (lower is better)
Translates to: LSVSLLEGEKPA*LYATILEQETP
Trigger: AGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAGAAACAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR GCA 72 bp TGCCTTCTTCTGAGCCCTCCAAACTCTTCCAATCTCTaGCTGTTACCCAGTTCCAAACTTGCTTCCACATTT +
Preference number: 3 (lower is better)
Translates to: CLLLSPPNSSNL*LLPSSKLASTF
Trigger: AAATGTGGAAGCAAGTTTGGAACTGGGTAACAGGCAGAGATTGGAAGAGTTTGGAGGGCTCAGAAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 72 bp TGTTGCCCAGACAGGAATACAGGGGCTATTCACATATaGAATCATAGCATACTGAGCCTTGAACTTCTGGCC +
Preference number: 3 (lower is better)
Translates to: CCPDRNTGAIHI*NHSILSLELLA
Trigger: GGCCAGAAGTTCAAGGCTCAGTATGCTATGATTGCATATGTGAATAGCCCCTGTATTCCTGTCTGGGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR CCA 72 bp TGCTCCATACCCTGCTGGGATTCTTTCTCTGCCACATaGCCAGGCTGCAAATTTGCTGAATTTTTATGCTCT +
Preference number: 3 (lower is better)
Translates to: CSIPCWDSFSAT*PGCKFAEFLCS
Trigger: AGAGCATAAAAATTCAGCAAATTTGCAGCCTGGCCATGTGGCAGAGAAAGAATCCCAGCAGGGTATGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 72 bp CCAAGGAGAGGGTTGTGGGGACCTCTGATTTATAACTaGTTGGTCAGAAGCATAAGCAAAAACCTGGACTTG +
Preference number: 3 (lower is better)
Translates to: PRRGLWGPLIYN*LVRSISKNLDL
Trigger: CAAGTCCAGGTTTTTGCTTATGCTTCTGACCAACCAGTTATAAATCAGAGGTCCCCACAACCCTCTCCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR CCA 72 bp GGTAAAAGCATTTGGATGGATGCTGAGTATCCCAAGTaGACTGTGCTAGAACTCAACATGACCCCACTCTTC +
Preference number: 3 (lower is better)
Translates to: GKSIWMDAEYPK*TVLELNMTPLF
Trigger: GAAGAGTGGGGTCATGTTGAGTTCTAGCACAGTCCACTTGGGATACTCAGCATCCATCCAAATGCTTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CAA 90 bp TTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAGTGAAGAGCACATCTTaGTGCTGTCTAATAACTTCT +
Preference number: 3 (lower is better)
Translates to: LLEGEKPACLYATILEQEVKSTS*CCLITS
Trigger: AGAAGTTATTAGACAGCACAAAGATGTGCTCTTCAC...TTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
3UTR-3UTR CAA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTATTTCAGCAAGAGATTaGGAGAGGAGAATCATCCAA +
Preference number: 3 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGISARD*ERRIIQ
Trigger: TTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAAT...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp GAAGTTCCACATCCCTTTCCACATGCCTTGCCCTATGCATCTCTTCCATCTGGCTGCTCTGCTTCCCTTTaGAATATAAGTTCCAACTTT +
Preference number: 3 (lower is better)
Translates to: EVPHPFPHALPYASLPSGCSASL*NISSNF
Trigger: AAAGTTGGAACTTATATTCAAAAGGGAAGCAGAGCA...GCCAGATGGAAGAGATGCATAGGGCAAGGCATGTGGAAAGGGATGTGGAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CAA 90 bp AGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGTGCTCTGCTTCCCTTTaGAATATAAGTTCCAACTTT +
Preference number: 3 (lower is better)
Translates to: RVLPGHPGYLSHHLKSLWCSASL*NISSNF
Trigger: AAAGTTGGAACTTATATTCAAAAGGGAAGCAGAGCA...CCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp TTCAAGATGAGATTTGGAGGGGATAAAGAACCAAACCGTATCATTCCACCCATGCATCATCTGAAATCTTaGTGGGAGCTGCCAAGCCTC +
Preference number: 3 (lower is better)
Translates to: FKMRFGGDKEPNRIIPPMHHLKS*WELPSL
Trigger: GAGGCTTGGCAGCTCCCACAAAGATTTCAGATGATG...CATGGGTGGAATGATACGGTTTGGTTCTTTATCCCCTCCAAATCTCATCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 72 bp TCCCTGCTAGCAGGGATCAAGTGTAGTTTCTGCAGATaGGAGGAACTTGCACACAATTTGGAAAGCATAAGG +
Preference number: 3 (lower is better)
Translates to: SLLAGIKCSFCR*EELAHNLESIR
Trigger: CCTTATGCTTTCCAAATTGTGTGCAAGTTCCTCTCATCTGCAGAAACTACACTTGATCCCTGCTAGCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR CCA 72 bp CATCCTACAAAAAGATCAAACCCAAGGAGAGGGTTGTaGGGACCTCTGATTTATAACTGGTTGGTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: HPTKRSNPRRGL*GPLIYNWLVRS
Trigger: GCTTCTGACCAACCAGTTATAAATCAGAGGTCCCCACAACCCTCTCCTTGGGTTTGATCTTTTTGTAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CAA 90 bp TGGATGCTCCTTATAATTCGCTCTAAGAAGCCAATCTGCTGTGTGAGACGAAGAATTCTGGTGAAGTTGTaGTACTTCCCCTTGCTGGTT +
Preference number: 3 (lower is better)
Translates to: WMLLIIRSKKPICCVRRRILVKL*YFPLLV
Trigger: AACCAGCAAGGGGAAGTACAACAACTTCACCAGAAT...TCTTCGTCTCACACAGCAGATTGGCTTCTTAGAGCGAATTATAAGGAGCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR CAA 90 bp GAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATTCAGAGTGGTACGAGTATGCAAATTCTCCACTTaGACGCTGCAGGAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: EENHPNYIRSEVFRVVRVCKFST*TLQEVA
Trigger: AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCA...TACTCGTACCACTCTGAATACTTCACTTCTGATATAGTTTGGATGATTCTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CAA 90 bp GAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATAATTCATTATCGTGAGTGCAAATTCTCCACTTaGACGCTGCAGGAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: EVPHTFKHLDLAIIHYRECKFST*TLQEVA
Trigger: AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCA...CTCACGATAATGAATTATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CAA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGAGATATGCTTGGGCTTaGACAAAAATTCCTAGCATG +
Preference number: 3 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMRYAWA*TKIPSM
Trigger: CATGCTAGGAATTTTTGTCAAAGCCCAAGCATATCT...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CAA 90 bp CTGAGAGGCTGGGAATTTCTTGTGGTGAGTGGTATACACTTACAAGTTGTGCACACAAGTTGTGCACTTTaGGTAGATATGCTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: LRGWEFLVVSGIHLQVVHTSCAL*VDMLGL
Trigger: AAGCCCAAGCATATCTACCAAAAGTGCACAACTTGT...GTGCACAACTTGTAAGTGTATACCACTCACCACAAGAAATTCCCAGCCTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR TCA 72 bp GAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCTTGCTGGTTGTATTTT +
Preference number: 3 (lower is better)
Translates to: ELHRIWSRCKFW*SCCTSPCWLYF
Trigger: AAAATACAACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
ENST00000670783.1
3UTR TCA 72 bp GAGGGGATAAAGAACCAAACCGTATCATTCCACCCATaGCCCCTCAAATTGCATGTCTTTCTCACACTACAA +
Preference number: 3 (lower is better)
Translates to: EGIKNQTVSFHP*PLKLHVFLTLQ
Trigger: TTGTAGTGTGAGAAAGACATGCAATTTGAGGGGTCATGGGTGGAATGATACGGTTTGGTTCTTTATCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 72 bp GACCCAACCTCCAACAACGGGGATTACATTTCAAGATaGGATTTGGAGGGGATAAAGAACCAAACCGTATCA +
Preference number: 3 (lower is better)
Translates to: DPTSNNGDYISR*DLEGIKNQTVS
Trigger: TGATACGGTTTGGTTCTTTATCCCCTCCAAATCTCATCTTGAAATGTAATCCCCGTTGTTGGAGGTTGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 72 bp CAGTATTGTGGGACTGAGAGCTTAACTCATGGGATCTaGTGCTATCTTCAGGTAGATAGTGTCAGACTGACT +
Preference number: 3 (lower is better)
Translates to: QYCGTESLTHGI*CYLQVDSVRLT
Trigger: AGTCAGTCTGACACTATCTACCTGAAGATAGCATCAGATCCCATGAGTTAAGCTCTCAGTCCCACAATACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR CCA 72 bp GGGACTTCTGAGAGGCTGGGAATTTCTTGTGGTGAGTaGTATACACTTACAAGTTGTGCACTTTTGGTAGAT +
Preference number: 3 (lower is better)
Translates to: GTSERLGISCGE*YTLTSCALLVD
Trigger: ATCTACCAAAAGTGCACAACTTGTAAGTGTATACCACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CAA 90 bp ATATTTCTTTCTGTTTCTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCTTGGGTGATATCCATTaGGGATCTGTGGTAACTCTT +
Preference number: 3 (lower is better)
Translates to: IFLSVSLLEGEKPACLYALGDIH*GSVVTL
Trigger: AAGAGTTACCACAGATCCCAAATGGATATCACCCAA...GGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAGAAACAGAAAGAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
3UTR-3UTR CAA 90 bp GAACACACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACTTGCCATTGCTTCTGATTTTGTTCCTTaGCTTTCTGTAGGTCAGCTG +
Preference number: 3 (lower is better)
Translates to: EHTRFSGDFSGDFELAIASDFVP*LSVGQL
Trigger: CAGCTGACCTACAGAAAGCAAAGGAACAAAATCAGA...AGCAATGGCAAGTTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGTGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR CAA 90 bp GTTTTTCTCCAGATGATGGATGCTGTTCTCTCTGTTCACCACCCACAGTTTTTCAAGTTGCTTATTCTCTaGAGATTCACACACCTCTCC +
Preference number: 3 (lower is better)
Translates to: VFLQMMDAVLSVHHPQFFKLLIL*RFTHLS
Trigger: GGAGAGGTGTGTGAATCTCAAGAGAATAAGCAACTT...GAAAAACTGTGGGTGGTGAACAGAGAGAACAGCATCCATCATCTGGAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000664418.1
3UTR-3UTR CAA 90 bp CAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGATATGCTTGGGCTTaGACAAAAATTCCTAGCATG +
Preference number: 3 (lower is better)
Translates to: QKLHSVRTVVTLKEEEGCRYAWA*TKIPSM
Trigger: CATGCTAGGAATTTTTGTCAAAGCCCAAGCATATCT...ACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CAA 90 bp CATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGAGATAGAACAAGTTGTGCACTTTaGGTAGATATGCTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: HSVRTVVTLKEEEGCRDRTSCAL*VDMLGL
Trigger: AAGCCCAAGCATATCTACCAAAAGTGCACAACTTGT...TCTATCTCTACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR TCA 72 bp CCTCTAGCTGCTGCTTCTCTGAAATACAAGTGTCTGTaGGACAGACTTTATGAGCATGTTCTAATTTCCGCT +
Preference number: 3 (lower is better)
Translates to: PLAAASLKYKCL*DRLYEHVLISA
Trigger: AGCGGAAATTAGAACATGCTCATAAAGTCTGTCTCACAGACACTTGTATTTCAGAGAAGCAGCAGCTAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
ENST00000670783.1
3UTR TCA 72 bp ACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGTaGAGACCTCAGTGCTGTATATTTCTTTCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: THPHAGVLHCCW*RPQCCIFLSVS
Trigger: AGAAACAGAAAGAAATATACAGCACTGAGGTCTTCACCAGCAACAATGCAGAACTCCAGCATGAGGATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR TCA 72 bp AGAAGCCACATTTATGTATCCAGCCTCAGAATTCTGTaGACACACAAGATTCTCAGGAGACTTTTCAGGGGA +
Preference number: 3 (lower is better)
Translates to: RSHIYVSSLRIL*THKILRRLFRG
Trigger: TCCCCTGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACATAAATGTGGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR TCA 72 bp AGTTCCAACTTTAAGTCATTCCTTTGCTCCCATATCTaGTCACAGGTTGTTACAAGGAGTCAGGCCACATCT +
Preference number: 3 (lower is better)
Translates to: SSNFKSFLCSHI*SQVVTRSQATS
Trigger: AGATGTGGCCTGACTCCTTGTAACAACCTGTGATCAGATATGGGAGCAAAGGAATGACTTAAAGTTGGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 72 bp TTACCTACGGAAGACTTAGCTATGATGCTGGCCAGGTaGCAACACTTCATAGGTTTGAAGTGTTGTCTTACA +
Preference number: 3 (lower is better)
Translates to: LPTEDLAMMLAR*QHFIGLKCCLT
Trigger: TGTAAGACAACACTTCAAACCTATGAAGTGTTGTCACCTGGCCAGCATCATAGCTAAGTCTTCCGTAGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CAA 90 bp TGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTCAGTTTTGTGATGTTTaGTCTTTTTCCAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: CIESGAGANSGEVVVLPLQFCDV*SFSRSS
Trigger: TGAAGACCTGGAAAAAGACAAAACATCACAAAACTG...AAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000664418.1
3UTR-3UTR CAA 90 bp GAGAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTTTCATCAGTGAGCCTTaGAATCTCTTCATGAGCCAC +
Preference number: 3 (lower is better)
Translates to: EKQTIEGILHIVKRRNCIFISEP*NLFMSH
Trigger: GTGGCTCATGAAGAGATTCAAAGGCTCACTGATGAA...AATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667947.1
3UTR-3UTR CAA 90 bp TATAGTCAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGACAAGTTGTGCACTTTaGGTAGATATGCTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: YSQTQKLHSVRTVVTLKETSCAL*VDMLGL
Trigger: AAGCCCAAGCATATCTACCAAAAGTGCACAACTTGT...CTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR GCA 72 bp AATCGCAAATATTCTTCACGTAGAGCTTCCTTCTCTTaGTGTAGCTTAGATAGCTTCTCTGACAATTCCTGG +
Preference number: 3 (lower is better)
Translates to: NRKYSSRRASFS*CSLDSFSDNSW
Trigger: CCAGGAATTGTCAGAGAAGCTATCTAAGCTACAGCAAGAGAAGGAAGCTCTACGTGAAGAATATTTGCGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR GCA 72 bp TGGATGCTCCTTATAATTCGCTCTAAGAAGCCAATCTaGTGTGTGAGACGAAGACTATTTTCCTGTAATTGC +
Preference number: 3 (lower is better)
Translates to: WMLLIIRSKKPI*CVRRRLFSCNC
Trigger: GCAATTACAGGAAAATAGTCTTCGTCTCACACAGCAGATTGGCTTCTTAGAGCGAATTATAAGGAGCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR GCA 72 bp GTACATCCAGTTGGTGTCCACAAAGAATTGGAGAATTaGTTAGTATGGGGAAAAACTCACATAACTGGTGTC +
Preference number: 3 (lower is better)
Translates to: VHPVGVHKELEN*LVWGKTHITGV
Trigger: GACACCAGTTATGTGAGTTTTTCCCCATACTAAGCAATTCTCCAATTCTTTGTGGACACCAACTGGATGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR CCA 72 bp ACAGGAAACTCCTTAAGATTCTCTCCTCTGCGAATATaGATGCTCCTTATAATTCGCTCTAAGAAGCCAATC +
Preference number: 3 (lower is better)
Translates to: TGNSLRFSPLRI*MLLIIRSKKPI
Trigger: GATTGGCTTCTTAGAGCGAATTATAAGGAGCATCCATATTCGCAGAGGAGAGAATCTTAAGGAGTTTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR CCA 72 bp TATCTTCCTATGTTACTGATAATTCAGGCTCTAACATaGAAGCCTCAATCTGCTGACTACAGCACTCAGTTC +
Preference number: 3 (lower is better)
Translates to: YLPMLLIIQALT*KPQSADYSTQF
Trigger: GAACTGAGTGCTGTAGTCAGCAGATTGAGGCTTCCATGTTAGAGCCTGAATTATCAGTAACATAGGAAGATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509712.6
3UTR CCA 72 bp TGTAGTTTAGAAGTTAAGCCACAAGGTAAAAGCATTTaGATGGATGCTGAGTATCCCAAGTGGACTGTGCTA +
Preference number: 3 (lower is better)
Translates to: CSLEVKPQGKSI*MDAEYPKWTVL
Trigger: TAGCACAGTCCACTTGGGATACTCAGCATCCATCCAAATGCTTTTACCTTGTGGCTTAACTTCTAAACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CAA 90 bp ACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACTTGCCATTGCTTCTTTTTCTGACAATTCCTGGTaGCTTTTGACATGCTCATCA +
Preference number: 3 (lower is better)
Translates to: TRFSGDFSGDFELAIASFSDNSW*LLTCSS
Trigger: TGATGAGCATGTCAAAAGCAACCAGGAATTGTCAGA...AAAAGAAGCAATGGCAAGTTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR CAA 90 bp ATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCACAGTCTCTTGAAGACTaGCAAATGACTCTACCAAAC +
Preference number: 3 (lower is better)
Translates to: MYPASEFCEHTRFSGDFSQSLED*QMTLPN
Trigger: GTTTGGTAGAGTCATTTGCAAGTCTTCAAGAGACTG...TGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
3UTR-3UTR CAA 90 bp CCTTCCACTTATGAGCCTGTAAAAATCAAAATAAGTCATTTACTCCCAAGATACCCAAAATACTCTCCCTaGACTCCATGTCCCACATCC +
Preference number: 3 (lower is better)
Translates to: PSTYEPVKIKISHLLPRYPKYSP*TPCPTS
Trigger: GGATGTGGGACATGGAGTCAAGGGAGAGTATTTTGG...GTATCTTGGGAGTAAATGACTTATTTTGATTTTTACAGGCTCATAAGTGGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR-3UTR CAA 90 bp CATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTCAGTCAGGACAAGATATGCTTGGGCTTaGACAAAAATTCCTAGCATG +
Preference number: 3 (lower is better)
Translates to: HRRHTAYSQTQKLHSVRTRYAWA*TKIPSM
Trigger: CATGCTAGGAATTTTTGTCAAAGCCCAAGCATATCT...TGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CAA 90 bp GAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTCAACAAGTTGTGCACTTTaGGTAGATATGCTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: EANHRRHTAYSQTQKLHSTSCAL*VDMLGL
Trigger: AAGCCCAAGCATATCTACCAAAAGTGCACAACTTGT...TGAATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
3UTR-3UTR CAA 90 bp CATTTTGGAACAGGAAACTCCTTAAGATTCTCTCCTCTGCGAATATGGATGCTCCAGTTTTGTGATGTTTaGTCTTTTTCCAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: HFGTGNSLRFSPLRIWMLQFCDV*SFSRSS
Trigger: TGAAGACCTGGAAAAAGACAAAACATCACAAAACTG...GAGCATCCATATTCGCAGAGGAGAGAATCTTAAGGAGTTTCCTGTTCCAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477155.6
3UTR-3UTR CAA 90 bp GAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATAATTCATTATCGTGAGGAACTTCTGGATTTATaGAAAGCTAGCAGCAGTCCT +
Preference number: 3 (lower is better)
Translates to: EVPHTFKHLDLAIIHYREELLDL*KASSSP
Trigger: AGGACTGCTGCTAGCTTTCAATAAATCCAGAAGTTC...CTCACGATAATGAATTATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR TCA 72 bp ACTCTTAAATTCAAACTTCCACAGATCCTTGGTACATaGACACAATGCAGGAGTTCTTTGCTAGGGTGTAAC +
Preference number: 3 (lower is better)
Translates to: TLKFKLPQILGT*TQCRSSLLGCN
Trigger: GTTACACCCTAGCAAAGAACTCCTGCATTGTGTTCATGTACCAAGGATCTGTGGAAGTTTGAATTTAAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR GCA 72 bp GCCACATGGCCAGGCTGCAAATTTGCTGAATTTTTATaGTCTGCTTCCCTTTTGAATATAAGTTCCAACTTT +
Preference number: 3 (lower is better)
Translates to: ATWPGCKFAEFL*SASLLNISSNF
Trigger: AAAGTTGGAACTTATATTCAAAAGGGAAGCAGAGCATAAAAATTCAGCAAATTTGCAGCCTGGCCATGTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR CCA 72 bp GTTGGTGTCCACAAAGAATTGGAGAATTGCTTAGTATaGGGAAAAACTCACATAACTGGTGTCAGAAGTTGT +
Preference number: 3 (lower is better)
Translates to: VGVHKELENCLV*GKTHITGVRSC
Trigger: ACAACTTCTGACACCAGTTATGTGAGTTTTTCCCCATACTAAGCAATTCTCCAATTCTTTGTGGACACCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514642.1
3UTR-3UTR CAA 90 bp GTGAAGTATTCAGAGTGGTACGAGTATAGAAAGAAGAAACAGGTTTGTTTGTCTGAACTTCTGGATTTATaGAAAGCTAGCAGCAGTCCT +
Preference number: 3 (lower is better)
Translates to: VKYSEWYEYRKKKQVCLSELLDL*KASSSP
Trigger: AGGACTGCTGCTAGCTTTCAATAAATCCAGAAGTTC...AGACAAACAAACCTGTTTCTTCTTTCTATACTCGTACCACTCTGAATACTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CAA 90 bp GATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATTCAGAGTGGATTTCAGCAAGAGATTaGGAGAGGAGAATCATCCAA +
Preference number: 3 (lower is better)
Translates to: DLERRIIQTISEVKYSEWISARD*ERRIIQ
Trigger: TTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAAT...CCACTCTGAATACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
3UTR-3UTR CAA 90 bp GATTACATTTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAATACCCAGTTCCAAACTaGCTTCCACATTTTCAGGTA +
Preference number: 3 (lower is better)
Translates to: DYISARDLERRIIQTISEYPVPN*LPHFQV
Trigger: TACCTGAAAATGTGGAAGCAAGTTTGGAACTGGGTA...TTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAATGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
3UTR TCA 72 bp AGCAAGAAAAGTGAAACAATGGCTCATATAATCATATaGCTCATTGGTTCTACCGTATATCCTATCATGCAG +
Preference number: 3 (lower is better)
Translates to: SKKSETMAHIII*LIGSTVYPIMQ
Trigger: CTGCATGATAGGATATACGGTAGAACCAATGAGTCATATGATTATATGAGCCATTGTTTCACTTTTCTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR TCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCCTGCCTCAGCCTTCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLPASAF*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGG...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR CCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR CCA 90 bp GAGGGCTCTGCCCCTGTGGCAGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACGACTCTACTCTCCCCTaGTCCCTTCCAACTGTTTTG +
Preference number: 4 (lower is better)
Translates to: EGSAPVAGFCLGTQAISHDSTLP*SLPTVL
Trigger: CAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTC...GTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCTGCCACAGGGGCAGAGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCAGGCTGGAGTGCACTaGTGCAGTCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLQAGVH*CSLGSL
Trigger: CAGTGAGCCGAGACTGCACCAGTGCACTCCAGCCTG...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR GCA 90 bp GTAGGTGAAATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: VGEMGADMSHGDSGSKREFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...CTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCATTTCACCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000655164.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR GCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCTGGGAGGCAGAGGTTaGAGTGAGCGGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLLGGRG*SERRSC
Trigger: GCATGATCTCCGCTCACTGCAACCTCTGCCTCCCAG...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR CCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTAGCCTTCTGAGTAGCTaGGACTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLSLLSS*DYRHPP
Trigger: TGGCGGGTGCCTGTAGTCCCAGCTACTCAGAAGGCT...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR CCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCAGGCTGGAGTGCAGTaGTGCTATCGCAGGTTCACG +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLQAGVQ*CYRRFT
Trigger: CGTGAACCTGCGATAGCACCACTGCACTCCAGCCTG...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR GCA 90 bp GAGGGCTCTGCCCCTGTGGCAGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACGCCATTAATGAGGGATaGACTCCAATGACCCAAACA +
Preference number: 4 (lower is better)
Translates to: EGSAPVAGFCLGTQAISHAINEG*TPMTQT
Trigger: TGTTTGGGTCATTGGAGTGCATCCCTCATTAATGGC...GTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCTGCCACAGGGGCAGAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp AGCCACAGCTGGAGCTGTAGTAGCTGGGATTCAGGGAGCAGTGTCCTGAGGCTGCTCACTGGTTGGAGCTaGGTGTCTGAGGCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SHSWSCSSWDSGSSVLRLLTGWS*VSEAFP
Trigger: TGGGAAAGCCTCAGACACCCAGCTCCAACCAGTGAG...CAGCCTCAGGACACTGCTCCCTGAATCCCAGCTACTACAGCTCCAGCTGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp CAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTGAGCAGCCCCTGTGGCTaGTCTCACTGGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QDSSCKFSTLTLQEVASLSSPCG*SHWLEL
Trigger: CAGCTCCAACCAGTGAGATCAGCCACAGGGGCTGCT...CAGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp TCTCTGCAGTGTCAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLQCQDQMPTASLSLSLLFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...CAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000658812.1
CDS-3UTR GCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR GCA 90 bp ATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGCGGAGAGGTTGCTCCTGGTCCTCCTaGCTTCTTCTGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: MGADMSHGDSGSKRERRGCSWSS*LLLSPP
Trigger: TGGAGGGCTCAGAAGAAGGCAGGAGGACCAGGAGCA...ACCTCTCCGCTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp AAATTCCGCCTCCCAGGTTCAAGCCATCTTCCCCACCTCAGCCTCCTGAATAGCAGGCAGCAGCCCCTGTaGCTGATCTCACTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: KFRLPGSSHLPHLSLLNSRQQPL*LISLVG
Trigger: TCCAACCAGTGAGATCAGCCACAGGGGCTGCTGCCT...GCTATTCAGGAGGCTGAGGTGGGGAAGATGGCTTGAACCTGGGAGGCGGAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp TCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTCTGCTCAGCTTCTGGTaGGGGCCTCAGGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SGQFLQILHFDAAGGGFSLLSFW*GPQEAH
Trigger: GTGAGCTTCCTGAGGCCCTCACCAGAAGCTGAGCAG...AGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp ATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGCGGAGAGGTACAAACACAGCTCACTaGAGCCTTGACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MGADMSHGDSGSKRERRGTNTAH*SLDLLG
Trigger: GCCCAGGAGGTCAAGGCTTCAGTGAGCTGTGTTTGT...ACCTCTCCGCTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR TCA 90 bp TATGTGGAGGTCCTGGGAGGGTGGTGTGATCAGAGGTCATGGAAGTTCCACATCCTGGTCTCGAATTCCTaGCCTCAAGTGATCCGCCCG +
Preference number: 4 (lower is better)
Translates to: YVEVLGGWCDQRSWKFHILVSNS*PQVIRP
Trigger: CGGGCGGATCACTTGAGGTCAGGAATTCGAGACCAG...GATGTGGAACTTCCATGACCTCTGATCACACCACCCTCCCAGGACCTCCACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR GCA 90 bp GGAGCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAGCTGCTAGCTGCAGGTaGCTACGGAGACCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: GARESGEVPHTFKHLDLAAASCR*LRRPGR
Trigger: ACGCCCAGGTCTCCGTAGGCACCTGCAGCTAGCAGC...TGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655164.1
CDS-3UTR GCA 90 bp CAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: QKLHSVRTVVTLKEEEGCFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...ACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR GCA 90 bp AGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SCIESGAGANSGEVVVLPFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...GGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR GCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp CAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGCTCCCTGTGGCAGGGTTCTaGCTGGGCACCCAGGCTATC +
Preference number: 4 (lower is better)
Translates to: QSFLTLLSPGPFQLFCKLPVAGF*LGTQAI
Trigger: GATAGCCTGGGTGCCCAGGCAGAACCCTGCCACAGG...GAGCTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTCCTGTGGCAGGGTTCTaGCTGGGCACCCAGGCTATC +
Preference number: 4 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGPVAGF*LGTQAI
Trigger: GATAGCCTGGGTGCCCAGGCAGAACCCTGCCACAGG...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666893.1
CDS-3UTR CCA 90 bp GCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGACGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ADYTGSMVSASGQLLVRDDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...GTCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp AGGCTTATGGCTTGCATCCTCTGGACAGGCAGCCTGAGCTGTATCTGGGGTCCTTGGAGCTGTAGTAGCTaGGATTCAGGGAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RLMACILWTGSLSCIWGPWSCSS*DSGSSV
Trigger: GACACTGCTCCCTGAATCCCAGCTACTACAGCTCCA...AGGACCCCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCATAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp GCAGAGCAGTGGTACCCAGTGCTTGGCCCCCTAAACCATTCTTTCCTCCTACGTCTCACTGGTTGGAGCTaGGTGTCTGAGGCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: AEQWYPVLGPLNHSFLLRLTGWS*VSEAFP
Trigger: TGGGAAAGCCTCAGACACCCAGCTCCAACCAGTGAG...ACGTAGGAGGAAAGAATGGTTTAGGGGGCCAAGCACTGGGTACCACTGCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp CAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTGGTAGCTCTTCTCCTGTaGCTTTGCAGGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QDSSCKFSTLTLQEVASLVALLL*LCRQQP
Trigger: GGGCTGCTGCCTGCAAAGCCACAGGAGAAGAGCTAC...CAGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp TGGTCAGCTTCTGGTGAGGGACTCAGGAAGCTAACAATCATGGTGGTAGGTGAAGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: WSASGEGLRKLTIMVVGEADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...TTCACCTACCACCATGATTGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000663866.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR TCA 90 bp CTTTGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCACAGGTAGCAGCAGTCCTTTCTaGCTCTACTCTCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LCGSCQASFTLAFYVPTGSSSPF*LYSPLV
Trigger: GACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTGCT...ACCTGTGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp CAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTGCTGGTCAGCTTCTGGTaGGGGACTCAGGAAGCTAAC +
Preference number: 4 (lower is better)
Translates to: QDSSCKFSTLTLQEVASLLVSFW*GTQEAN
Trigger: GTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAG...CAGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTCTGGTCAGCTTCTGGTaGGGGACTCAGGAAGCTAAC +
Preference number: 4 (lower is better)
Translates to: ELQDSSCKFSTLTLQEVALVSFW*GTQEAN
Trigger: GTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAG...AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GAAAGCGTGGTGCCAGCATCTGCTCAGCTTCTGGTGAGGGCCTCAGGAAGCTCAAGACATGTCATATGGTaGGAGGAGCAAGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: ESVVPASAQLLVRASGSSRHVIW*EEQENG
Trigger: CCCATTCTCTTGCTCCTCTCACCATATGACATGTCT...TGAGCTTCCTGAGGCCCTCACCAGAAGCTGAGCAGATGCTGGCACCACGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTCGCTCAGCTGCTAGCTaGAGGTGCCTACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGRSAAS*RCLRRP
Trigger: AGGTCTCCGTAGGCACCTGCAGCTAGCAGCTGAGCG...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000658812.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR GCA 90 bp AGCAGATGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGATTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SRWIKGQTTDETFVGASGFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...TCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR GCA 90 bp CATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGAGATAGATTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: HSVRTVVTLKEEEGCRDRFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...TCTATCTCTACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR GCA 90 bp AGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGTGCTCCTGGTCCTCCTaGCTTCTTCTGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RVLPGHPGYLSHHLKSLWCSWSS*LLLSPP
Trigger: TGGAGGGCTCAGAAGAAGGCAGGAGGACCAGGAGCA...CCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp AAATTCCGCCTCCCAGGTTCAAGCCATCTTCCCCACCTCAGCCTCCTGAATAGCCTGGGATTCTTTCTCTaGCACATGGCCAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KFRLPGSSHLPHLSLLNSLGFFL*HMARLQ
Trigger: TTGCAGCCTGGCCATGTGGCAGAGAAAGAATCCCAG...GCTATTCAGGAGGCTGAGGTGGGGAAGATGGCTTGAACCTGGGAGGCGGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTTTTTGGGCAGTGATCTaGTCCTGTATTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLFWAVI*SCIAFS
Trigger: GGAGAAGGCAATACAGGACCAGATCACTGCCCAAAA...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR CCA 90 bp CTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LCWRERSQLASMPPFWNRDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...CCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665812.1
CDS-3UTR TCA 90 bp CCCAGGTACAGGATGCAAGCTGCCTGTGGATCTACCATTCTGGAGTCTGGAGGGTCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRYRMQAACGSTILESGGSLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...CCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCATCCTGTACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000667947.1
CDS-3UTR TCA 90 bp AGCCACAGCTGGAGCTGTAGTAGCTGGGATTCAGGGAGCAGTGTCCTGAGGCTGGAGGTGGCTTCTCTGTaGTTTCTGAACTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: SHSWSCSSWDSGSSVLRLEVASL*FLNFWI
Trigger: AATCCAGAAGTTCAGAAATCACAGAGAAGCCACCTC...CAGCCTCAGGACACTGCTCCCTGAATCCCAGCTACTACAGCTCCAGCTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp AGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGCTGGTCAGCTTCTGGTaGGGGACTCAGGAAGCTAAC +
Preference number: 4 (lower is better)
Translates to: RVLPGHPGYLSHHLKSLWLVSFW*GTQEAN
Trigger: GTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAG...CCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp ATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGCGGAGAGGTAGCCTCCTGAATAGCTaGGACTACAGGTGTATGCCA +
Preference number: 4 (lower is better)
Translates to: MGADMSHGDSGSKRERRGSLLNS*DYRCMP
Trigger: TGGCATACACCTGTAGTCTCAGCTATTCAGGAGGCT...ACCTCTCCGCTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTGTTGCTGATCTTTTCTaGAGAAGCAGTCCCACTACA +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLVADLF*RSSPTT
Trigger: TGTAGTGGGACTGCTTCTTCAGAAAAGATCAGCAAC...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR GCA 90 bp TGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGCTAGCTGCAGGTaGCTACGGAGACCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: CIESGAGANSGEVVVLPLAASCR*LRRPGR
Trigger: ACGCCCAGGTCTCCGTAGGCACCTGCAGCTAGCAGC...AAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000665812.1
ENST00000669138.1
CDS-3UTR GCA 90 bp CATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTCAGTCAGGACATTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: HRRHTAYSQTQKLHSVRTFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...TGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR GCA 90 bp GATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: DIHLGSVVTLLNVMVHLLFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...CAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: YPFGICGNSSQCHGPPFVFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...GACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp AGGCTTATGGCTTGCATCCTCTGGACAGGCAGCCTGAGCTGTATCTGGGGTCCTAATCTTTGTGGGAGCTaGCAAGCCTCCTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: RLMACILWTGSLSCIWGPNLCGS*QASFTL
Trigger: AAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATT...AGGACCCCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCATAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp CCCAGGTACAGGATGCAAGCTGCCTGTGGATCTACCATTCTGGAGTCTGGAGGGACATCCCTTTCCACATaGCTTGCCCTATGCATCTCT +
Preference number: 4 (lower is better)
Translates to: PRYRMQAACGSTILESGGTSLST*LALCIS
Trigger: AGAGATGCATAGGGCAAGGCATGTGGAAAGGGATGT...CCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCATCCTGTACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR CCA 90 bp ATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGCGGAGAGGTAGTTTCGGACCATACTaGGGAGAAGCAGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: MGADMSHGDSGSKRERRGSFGPY*GEAEKA
Trigger: GGCCTTTTCTGCTTCTCCCCAGTATGGTCCGAAACT...ACCTCTCCGCTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000655164.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp AAGGAACACAGGGGACTTCTGAGAGGCTGGGAATTTCTTGTGGTGAGTGGTATAAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: KEHRGLLRGWEFLVVSGINACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...TATACCACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR CCA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR CCA 90 bp TATGTGGAGGTCCTGGGAGGGTGGTGTGATCAGAGGTCATGGAAGTTCCACATCCAGCCTCTCAAGCGCTaGGATTACAGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: YVEVLGGWCDQRSWKFHIQPLKR*DYSCEP
Trigger: TGGCTCACAACTGTAATCCCAGCGCTTGAGAGGCTG...GATGTGGAACTTCCATGACCTCTGATCACACCACCCTCCCAGGACCTCCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR CCA 90 bp GCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGACTGGAGCTGTAGTAGCTaGGATTCAGGGAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ADYTGSMVSASGQLLVRDWSCSS*DSGSSV
Trigger: GACACTGCTCCCTGAATCCCAGCTACTACAGCTCCA...GTCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp TGGTCAGCTTCTGGTGAGGGACTCAGGAAGCTAACAATCATGGTGGTAGGTGAAAGGCAGCAGCCCCTGTaGCTGATCTCACTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: WSASGEGLRKLTIMVVGERQQPL*LISLVG
Trigger: TCCAACCAGTGAGATCAGCCACAGGGGCTGCTGCCT...TTCACCTACCACCATGATTGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTATCTCGATTCTGTTGTaGGCCCTCCTCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGISILL*ALLLLP
Trigger: GGGCAGAAGGAGGAGGGCTCACAACAGAATCGAGAT...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000509712.6
CDS-3UTR TCA 90 bp GCAGAGCAGTGGTACCCAGTGCTTGGCCCCCTAAACCATTCTTTCCTCCTACGTCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: AEQWYPVLGPLNHSFLLRPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...ACGTAGGAGGAAAGAATGGTTTAGGGGGCCAAGCACTGGGTACCACTGCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTATTCTGGATTGTTGCTaGGAACAGGTCATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLILDCC*EQVISS
Trigger: ACTGGAAATGACCTGTTCTCAGCAACAATCCAGAAT...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR TCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCTTTTCAGGGGACTTTaGACTTGCCATTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLLFRGL*TCHCFF
Trigger: AAAGAAGCAATGGCAAGTTCAAAGTCCCCTGAAAAG...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR TCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTTTGAAGACTCTTGGGTaGTATCCATTTGGGATCTGT +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLLKTLG*YPFGIC
Trigger: ACAGATCCCAAATGGATATCACCCAAGAGTCTTCAA...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR TCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR TCA 90 bp CAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGCTCAGCAGCAGTCCTTTCTaGCTCTACTCTCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QSFLTLLSPGPFQLFCKLSSSPF*LYSPLV
Trigger: GACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTGCT...GAGCTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CTACCATTCTGGAGTCTGGAGGGCAGTGGCCCACTTCTTATAGCTCCACTAGGCAGGGCAGACAACAGATaGGACATTTGTAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPFWSLEGSGPLLIAPLGRADNR*DICRSF
Trigger: GAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCT...GCCTAGTGGAGCTATAAGAAGTGGGCCACTGCCCTCCAGACTCCAGAATGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp TGGTCAGCTTCTGGTGAGGGACTCAGGAAGCTAACAATCATGGTGGTAGGTGAACTGGTCAGCTTCTGGTaGGGGACTCAGGAAGCTAAC +
Preference number: 4 (lower is better)
Translates to: WSASGEGLRKLTIMVVGELVSFW*GTQEAN
Trigger: GTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAG...TTCACCTACCACCATGATTGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CACTTTGACGCTGCAGGAGGTGGCTTCTCTGTGATTTCTGAACTTCTGGATTTACTGCTCAGCTTCTGGTaGGGGCCTCAGGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HFDAAGGGFSVISELLDLLLSFW*GPQEAH
Trigger: GTGAGCTTCCTGAGGCCCTCACCAGAAGCTGAGCAG...TAAATCCAGAAGTTCAGAAATCACAGAGAAGCCACCTCCTGCAGCGTCAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp AGGCTTATGGCTTGCATCCTCTGGACAGGCAGCCTGAGCTGTATCTGGGGTCCTATGAGCTTGGAAGCCTaGAAACTGCATTTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RLMACILWTGSLSCIWGPMSLEA*KLHFPD
Trigger: GTCTGGAAAATGCAGTTTTCAGGCTTCCAAGCTCAT...AGGACCCCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCATAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR GCA 90 bp AGCCACAGCTGGAGCTGTAGTAGCTGGGATTCAGGGAGCAGTGTCCTGAGGCTGTTTAAGTCCAAGTTCTaGCCTCGTTCATATCGAAGC +
Preference number: 4 (lower is better)
Translates to: SHSWSCSSWDSGSSVLRLFKSKF*PRSYRS
Trigger: GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAA...CAGCCTCAGGACACTGCTCCCTGAATCCCAGCTACTACAGCTCCAGCTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp CATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGAGATAGAGCTGCTAGCTGCAGGTaGCTACGGAGACCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: HSVRTVVTLKEEEGCRDRAASCR*LRRPGR
Trigger: ACGCCCAGGTCTCCGTAGGCACCTGCAGCTAGCAGC...TCTATCTCTACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000654683.1
ENST00000667947.1
CDS-3UTR GCA 90 bp CAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAACGCTCAGCTGCTAGCTaGAGGTGCCTACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: QTQKLHSVRTVVTLKEEERSAAS*RCLRRP
Trigger: AGGTCTCCGTAGGCACCTGCAGCTAGCAGCTGAGCG...TTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000654683.1
ENST00000667947.1
CDS-3UTR GCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCGCTCAGCTGCTAGCTaGAGGTGCCTACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRRSAAS*RCLRRP
Trigger: AGGTCTCCGTAGGCACCTGCAGCTAGCAGCTGAGCG...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp CCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGCGCTCAGCTGCTAGCTaGAGGTGCCTACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: PFGICGNSSQCHGPPFVQRSAAS*RCLRRP
Trigger: AGGTCTCCGTAGGCACCTGCAGCTAGCAGCTGAGCG...CTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAATTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SEFCEHTRFSGDFSGDFEFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...TTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665812.1
CDS-3UTR GCA 90 bp GGAGCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAACAGTTGTGAGCCACTaGTCCTGGTCCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GARESGEVPHTFKHLDLATVVSH*SWSSCL
Trigger: AAGGCAGGAGGACCAGGAGCAGTGGCTCACAACTGT...TGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp AGCCACAGCTGGAGCTGTAGTAGCTGGGATTCAGGGAGCAGTGTCCTGAGGCTGGCCACATGGCCAGGCTaGAAATTTGCTGAATTTTTA +
Preference number: 4 (lower is better)
Translates to: SHSWSCSSWDSGSSVLRLATWPG*KFAEFL
Trigger: TAAAAATTCAGCAAATTTGCAGCCTGGCCATGTGGC...CAGCCTCAGGACACTGCTCCCTGAATCCCAGCTACTACAGCTCCAGCTGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp AGGAAGCTCACAATCATGATGGTAGGTGAAGTGGGAGCAGACATGTCATATGGTCTTCTCCTGTGGCTTTaGAGGCAGCAGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RKLTIMMVGEVGADMSYGLLLWL*RQQPLW
Trigger: CCACAGGGGCTGCTGCCTGCAAAGCCACAGGAGAAG...ACCATATGACATGTCTGCTCCCACTTCACCTACCATCATGATTGTGAGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp AGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGTTGTCCAGGCTGGAGTaGAATGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RVLPGHPGYLSHHLKSLWLSRLE*NGVISA
Trigger: AGCTGAGATCACGCCATTGCACTCCAGCCTGGACAA...CCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp ATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGCGGAGAGGTCCTTTCCACATGCCTTaGCCTATGCATCTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: MGADMSHGDSGSKRERRGPFHMP*PMHLFH
Trigger: ATGGAAGAGATGCATAGGGCAAGGCATGTGGAAAGG...ACCTCTCCGCTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR CCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp AGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: SCIESGAGANSGEVVVLPNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...GGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR CCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000667947.1
CDS-3UTR CCA 90 bp GGTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGGACAGCCTCTCAAGCGCTaGGATTACAGTTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSAWAPRLSLTSSEIFVGQPLKR*DYSCEP
Trigger: TGGCTCACAACTGTAATCCCAGCGCTTGAGAGGCTG...TCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp TTCAAGATGAGATTTGGAGGGGATAAAGAACCAAACCGTATCATTCCACCCATGCTGATGGCAGAGGGGTaGGGAGACTCTGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FKMRFGGDKEPNRIIPPMLMAEG*GDSGAA
Trigger: GGCTGCCCCAGAGTCTCCCCACCCCTCTGCCATCAG...CATGGGTGGAATGATACGGTTTGGTTCTTTATCCCCTCCAAATCTCATCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR TCA 90 bp CAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTGCGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QDSSCKFSTLTLQEVASLRCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...CAGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp TGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: WRERSQLASMPPFWNRKLACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...GAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
CDS-3UTR TCA 90 bp CTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: LWPQELTHPHAGVLHCCWPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...CCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
CDS-3UTR TCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTCTTGTAGTTCATCAGTaGGCCTTTGAATCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLLVVHQ*AFESLH
Trigger: ATGAAGAGATTCAAAGGCTCACTGATGAACTACAAG...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR TCA 90 bp CGCTCTAAGAAGCCAATCTGCTGTGTGAGACGAAGACTATTTTCCTGTAATTGCGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: RSKKPICCVRRRLFSCNCADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...GCAATTACAGGAAAATAGTCTTCGTCTCACACAGCAGATTGGCTTCTTAGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665812.1
CDS-3UTR TCA 90 bp TTTCAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: FQLSCIESGAGANSGEVVADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...AACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR TCA 90 bp CAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTGAATCATGGTGGTAGGTaGAATGGGAGCAGACATGTC +
Preference number: 4 (lower is better)
Translates to: QDSSCKFSTLTLQEVASLNHGGR*NGSRHV
Trigger: GACATGTCTGCTCCCATTTCACCTACCACCATGATT...CAGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp TATGTGGAGGTCCTGGGAGGGTGGTGTGATCAGAGGTCATGGAAGTTCCACATCCTGGTCTCAAACTCCTaGGCTCAAGTTCAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: YVEVLGGWCDQRSWKFHILVSNS*AQVQGQ
Trigger: TTGACCTTGAACTTGAGCTCAGGAGTTTGAGACCAG...GATGTGGAACTTCCATGACCTCTGATCACACCACCCTCCCAGGACCTCCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR TCA 90 bp GAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTATGATGCTGGCCAGGTaGCAACACTTCATAGGTTTG +
Preference number: 4 (lower is better)
Translates to: ELQDSSCKFSTLTLQEVAMMLAR*QHFIGL
Trigger: CAAACCTATGAAGTGTTGTCACCTGGCCAGCATCAT...AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR TCA 90 bp ATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGCGGAGAGGTAGCACTCCAACTTCATaGCCTCTGATGTTGAGGATA +
Preference number: 4 (lower is better)
Translates to: MGADMSHGDSGSKRERRGSTPTS*PLMLRI
Trigger: TATCCTCAACATCAGAGGTCATGAAGTTGGAGTGCT...ACCTCTCCGCTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000663866.1
ENST00000671281.1
CDS-3UTR GCA 90 bp TATAGTCAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGCTGCTAGCTGCAGGTaGCTACGGAGACCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: YSQTQKLHSVRTVVTLKEAASCR*LRRPGR
Trigger: ACGCCCAGGTCTCCGTAGGCACCTGCAGCTAGCAGC...CTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000654683.1
ENST00000667947.1
CDS-3UTR GCA 90 bp ATGCTCCTTATAATTCGCTCTAAGAAGCCAATCTGCTGTGTGAGACGAAGACTAGCTGCTAGCTGCAGGTaGCTACGGAGACCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: MLLIIRSKKPICCVRRRLAASCR*LRRPGR
Trigger: ACGCCCAGGTCTCCGTAGGCACCTGCAGCTAGCAGC...TAGTCTTCGTCTCACACAGCAGATTGGCTTCTTAGAGCGAATTATAAGGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665812.1
CDS-3UTR GCA 90 bp TATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCGCTGCTAGCTGCAGGTaGCTACGGAGACCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: YPFGICGNSSQCHGPPFVAASCR*LRRPGR
Trigger: ACGCCCAGGTCTCCGTAGGCACCTGCAGCTAGCAGC...GACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000657597.1
ENST00000660938.1
ENST00000665812.1
ENST00000667205.1
CDS-3UTR GCA 90 bp CTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTCTCTCCTCTCGCTCAGCTGCTAGCTaGAGGTGCCTACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: LASMPPFWNRKLLKILSSRSAAS*RCLRRP
Trigger: AGGTCTCCGTAGGCACCTGCAGCTAGCAGCTGAGCG...AGAGGAGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665812.1
CDS-3UTR GCA 90 bp TCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTATAGCTTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SWSTFCPGFKLPLLFSIAFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...AGCTATACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp CAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTATTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: QCHGPPFVQALNYHFCSVFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...TACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TGCATTGTTGCTGGTGAAGACCTCAGTGCTGTATATTTCTTTCTGTTTCTTTGTTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: CIVAGEDLSAVYFFLFLCFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...ACAAAGAAACAGAAAGAAATATACAGCACTGAGGTCTTCACCAGCAACAATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665812.1
CDS-3UTR GCA 90 bp GAAGTAAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAATTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: EVSYYVALSPSSALVHIEFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...TTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTTACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR GCA 90 bp CAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: QKLHSVRTVVTLKEEEGCSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...ACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR GCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp CAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTAAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: QLSCIESGAGANSGEVVVSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...TACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR GCA 90 bp CAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTCACGTAGGGGAAAGCTaGCCCTCCGTGGACTTCGTA +
Preference number: 4 (lower is better)
Translates to: QKLHSVRTVVTLKEEEGCHVGES*PSVDFV
Trigger: TACGAAGTCCACGGAGGGGCAGCTTTCCCCTACGTG...ACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000667947.1
CDS-3UTR GCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTCACGTAGGGGAAAGCTaGCCCTCCGTGGACTTCGTA +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLHVGES*PSVDFV
Trigger: TACGAAGTCCACGGAGGGGCAGCTTTCCCCTACGTG...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTCACGTAGGGGAAAGCTaGCCCTCCGTGGACTTCGTA +
Preference number: 4 (lower is better)
Translates to: CIESGAGANSGEVVVLPLHVGES*PSVDFV
Trigger: TACGAAGTCCACGGAGGGGCAGCTTTCCCCTACGTG...AAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR GCA 90 bp AGCCACAGCTGGAGCTGTAGTAGCTGGGATTCAGGGAGCAGTGTCCTGAGGCTGCAGATGAGAGGAACTTaGACACAATTTGGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SHSWSCSSWDSGSSVLRLQMRGT*TQFGKH
Trigger: ATGCTTTCCAAATTGTGTGCAAGTTCCTCTCATCTG...CAGCCTCAGGACACTGCTCCCTGAATCCCAGCTACTACAGCTCCAGCTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR CCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTTCTATGCCACCATTTTaGAACAGGAAACTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLSMPPF*NRKLLK
Trigger: CTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGA...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR CCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTCAGGCTGGAGTGCAGTaGTGCTATCGCAGGTTCACG +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLQAGVQ*CYRRFT
Trigger: CGTGAACCTGCGATAGCACCACTGCACTCCAGCCTG...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR CCA 90 bp TGTAAAGTACCCTGCTCTGGATGGAAGATATCGTCCATTTGTTGCTGTGGATCAAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: CKVPCSGWKISSICCCGSNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...TGATCCACAGCAACAAATGGACGATATCTTCCATCCAGAGCAGGGTACTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
CDS-3UTR CCA 90 bp CCTCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: PQNSVNTQDSQETFQGTLNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...CAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
CDS-3UTR CCA 90 bp GCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTGTATTTTAAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: AGANSGEVVVLPLAGCILNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...TAAAATACAACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR CCA 90 bp GAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ETFVGASGQFLQILHFDADFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...AGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp TCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTGACTCTACTCTCCCCTaGTCCCTTCCAACTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SGQFLQILHFDAAGGGFSDSTLP*SLPTVL
Trigger: CAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTC...AGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR CCA 90 bp GATGAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACTGGCAGGGTTCTGCCTaGGCACCCAGGCTATCTCTC +
Preference number: 4 (lower is better)
Translates to: DETFVGASGQFLQILHFDWQGSA*APRLSL
Trigger: GAGAGATAGCCTGGGTGCCCAGGCAGAACCCTGCCA...GTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp CACTTCTCTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGCATGACTCTCAGGCATaGCTGACAGTCCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: HFSVASGTDSSSCWSSALHDSQA*LTVHLR
Trigger: TCTGAGATGGACTGTCAGCCATGCCTGAGAGTCATG...CAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGAGAAGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
3UTR CAA 72 bp GGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTaGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: GHPGYLSHHLKS*WELPSLLHSCI
Trigger: AATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTCTCTATCTCGATTCTGTTGTaGGCCCTCCTCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASLPLCHHFGTGNSLRFSISILL*ALLLLP
Trigger: GGGCAGAAGGAGGAGGGCTCACAACAGAATCGAGAT...AGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477155.6
CDS-3UTR TCA 90 bp CCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGGCACCACTGTCATCTaGACTATCCCCAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PFGICGNSSQCHGPPFVQGTTVI*TIPRAL
Trigger: CAGAGCTCTGGGGATAGTTCAGATGACAGTGGTGCC...CTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR TCA 90 bp CAGCATCAAGCCATTTATGAGGGACCCACCCCCATGACAAAACCACCTCCTGTTCGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QHQAIYEGPTPMTKPPPVRCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...AACAGGAGGTGGTTTTGTCATGGGGGTGGGTCCCTCATAAATGGCTTGATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGCGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LCWRERSQLASMPPFWNRRCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...CCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp CAGCAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: QQSFLTLLSPGPFQLFCKACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...CTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GTAGGTGAAATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGTCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: VGEMGADMSHGDSGSKRESLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...CTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCATTTCACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp ATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGCGGAGAGGTATTCTGGATTGTTGCTaGGAACAGGTCATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: MGADMSHGDSGSKRERRGILDCC*EQVISS
Trigger: ACTGGAAATGACCTGTTCTCAGCAACAATCCAGAAT...ACCTCTCCGCTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGTGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRCGLRN*LILMLE
Trigger: CTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACA...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp CAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTATGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QLSCIESGAGANSGEVVVCGLRN*LILMLE
Trigger: CTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACA...TACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTAATGGGAAAGAATGTTaGATTAACCCTACATGTGCT +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLNGKEC*INPTCA
Trigger: AGCACATGTAGGGTTAATTCAACATTCTTTCCCATT...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR TCA 90 bp CAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QKLHSVRTVVTLKEEEGCFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...ACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR TCA 90 bp CAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTATTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QLSCIESGAGANSGEVVVFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...TACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR TCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp CCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PFGICGNSSQCHGPPFVQFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...CTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp CCCAGGTACAGGATGCAAGCTGCCTGTGGATCTACCATTCTGGAGTCTGGAGGGTTGTGCAAATTCTTGTaGAAGCTTCAAGACCTCACT +
Preference number: 4 (lower is better)
Translates to: PRYRMQAACGSTILESGGLCKFL*KLQDLT
Trigger: AGTGAGGTCTTGAAGCTTTCACAAGAATTTGCACAA...CCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCATCCTGTACCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666893.1
CDS-3UTR TCA 90 bp TATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: YPFGICGNSSQCHGPPFVADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...GACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR TCA 90 bp GATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: DIHLGSVVTLLNVMVHLLADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...CAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR TCA 90 bp TTATTTCCTACCTTAAGTCAGGATTCTGTGGGGTTTAGAGTTGAAGGAGTGGCAGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LFPTLSQDSVGFRVEGVAADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...TGCCACTCCTTCAACTCTAAACCCCACAGAATCCTGACTTAAGGTAGGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665176.1
CDS-3UTR TCA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTGAAGCCTCAATCTGCTaGCTACAGCACTCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGEASIC*LQHSVH
Trigger: GTGAACTGAGTGCTGTAGTCAGCAGATTGAGGCTTC...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509712.6
CDS-3UTR TCA 90 bp GAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTAGCAGCAGTCCTTTCTaGCTCTACTCTCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ETFVGASGQFLQILHFDASSSPF*LYSPLV
Trigger: GACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTGCT...AGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp AGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGAATCATGGTGGTAGGTaGAATGGGAGCAGACATGTC +
Preference number: 4 (lower is better)
Translates to: RVLPGHPGYLSHHLKSLWNHGGR*NGSRHV
Trigger: GACATGTCTGCTCCCATTTCACCTACCACCATGATT...CCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp CTTTGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCACAGGTCTTTGCTCCCATATCTaGTCACAGGTTGTTACAAGG +
Preference number: 4 (lower is better)
Translates to: LCGSCQASFTLAFYVPTGLCSHI*SQVVTR
Trigger: CCTTGTAACAACCTGTGATCAGATATGGGAGCAAAG...ACCTGTGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GAAAGCGTGGTGCCAGCATCTGCTCAGCTTCTGGTGAGGGCCTCAGGAAGCTCAGATTACATTTCAAGATaGGATTTGGAGGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: ESVVPASAQLLVRASGSSDYISR*DLEGIK
Trigger: CTTTATCCCCTCCAAATCTCATCTTGAAATGTAATC...TGAGCTTCCTGAGGCCCTCACCAGAAGCTGAGCAGATGCTGGCACCACGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATACCCACCTCAGCCTCCTaGATAGCTGAGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: ARESGEVPHTFKHLDLAIPTSAS*IAETTG
Trigger: ACCTGTAGTCTCAGCTATTCAGGAGGCTGAGGTGGG...TATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp AGCAGATGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGAGCACTCCAACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SRWIKGQTTDETFVGASGALQPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTTGGAGTGC...TCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCATCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655164.1
CDS-3UTR TCA 90 bp ATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCGCACTCCAACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: IHLGSVVTLLNVMVHLLSALQPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTTGGAGTGC...GGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667205.1
CDS-3UTR GCA 90 bp CTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGCATTTTCAGCTGAGTTaGATAGAATCTGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LWPQELTHPHAGVLHCCWHFQLS*IESGAG
Trigger: ACCGGCTCCAGATTCTATGCAACTCAGCTGAAAATG...CCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR GCA 90 bp CTTTGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCACAGGTCATTTTCAGCTGAGTTaGATAGAATCTGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LCGSCQASFTLAFYVPTGHFQLS*IESGAG
Trigger: ACCGGCTCCAGATTCTATGCAACTCAGCTGAAAATG...ACCTGTGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp AGCTTCAATAATCGCAAATATTCTTCACGTAGAGCTTCCTTCTCTTGCTGTAGCGCTGCTAGCTGCAGGTaGCTACGGAGACCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: SFNNRKYSSRRASFSCCSAASCR*LRRPGR
Trigger: ACGCCCAGGTCTCCGTAGGCACCTGCAGCTAGCAGC...GCTACAGCAAGAGAAGGAAGCTCTACGTGAAGAATATTTGCGATTATTGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665812.1
CDS-3UTR GCA 90 bp CCTTTTCCTGAAAAACTAAGAAATGCCATATGTGAGGACATCATGTACATAGAGTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PFPEKLRNAICEDIMYIEFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...CTCTATGTACATGATGTCCTCACATATGGCATTTCTTAGTTTTTCAGGAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665176.1
CDS-3UTR GCA 90 bp TCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATTTTTCCTGCGGAGGGTaGCGCGAGCGTCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SARDLERRIIQTISEVKYFSCGG*RERPGV
Trigger: GACCCCGGGACGCTCGCGGCACCCTCCGCAGGAAAA...ATACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR GCA 90 bp CATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGAGATAGAAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: HSVRTVVTLKEEEGCRDRSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...TCTATCTCTACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR GCA 90 bp ATCATGTACATAGAGTTTGTTGGTAGCAGTTCGGGGTTACAGGGATACAGGCATAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: IMYIEFVGSSSGLQGYRHSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...ATGCCTGTATCCCTGTAACCCCGAACTGCTACCAACAAACTCTATGTACATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665176.1
CDS-3UTR GCA 90 bp CCTCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: PQNSVNTQDSQETFQGTLSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...CAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
CDS-3UTR GCA 90 bp CAGCAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGCGGGATTCAAGGTTCTaGATGACGAACATCGGCCAA +
Preference number: 4 (lower is better)
Translates to: QQSFLTLLSPGPFQLFCKRDSRF*MTNIGQ
Trigger: TTGGCCGATGTTCGTCATGCAGAACCTTGAATCCCG...CTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR GCA 90 bp CAGCATCAAGCCATTTATGAGGGACCCACCCCCATGACAAAACCACCTCCTGTTGAGAGAGCGGAGAGGTaGCACACACTTTTAAACATC +
Preference number: 4 (lower is better)
Translates to: QHQAIYEGPTPMTKPPPVERAER*HTLLNI
Trigger: GATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTC...AACAGGAGGTGGTTTTGTCATGGGGGTGGGTCCCTCATAAATGGCTTGATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR GCA 90 bp GCCTTCTCTGCAGTGTCAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTGAGAGAGCGGAGAGGTaGCACACACTTTTAAACATC +
Preference number: 4 (lower is better)
Translates to: AFSAVSRPDANCFSLSLSERAER*HTLLNI
Trigger: GATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTC...AGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658812.1
CDS-3UTR GCA 90 bp TTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACGCTGGAGTGCACTGGTaGAGTCTCGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LGDIHLGSVVTLLNVMVHAGVHW*SLGSLQ
Trigger: TTGCAGTGAGCCGAGACTGCACCAGTGCACTCCAGC...GTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR GCA 90 bp TATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCTCACCCAGGCTGGAGTaGACTGGTGCAGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: YPFGICGNSSQCHGPPFVSPRLE*TGAVSA
Trigger: AGCCGAGACTGCACCAGTGCACTCCAGCCTGGGTGA...GACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR GCA 90 bp CCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGTAGAGACAGGGCTTTaGCATGTTGGCCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PFGICGNSSQCHGPPFVQVETGL*HVGLAG
Trigger: ACCAGCCAGGCCAACATGGCAAAGCCCTGTCTCTAC...CTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR CCA 90 bp CACTTCTCTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGGAGTTGCATAGAATCTaGAGCCGGTGCAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: HFSVASGTDSSSCWSSALELHRI*SRCKFW
Trigger: CCAGAATTTGCACCGGCTCCAGATTCTATGCAACTC...CAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGAGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR CCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGGAAAAGAGGGGAGAATaGGTGCTTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMEKRGE*VLSSLG
Trigger: CCCCAAGGAGGAAAGCACCCATTCTCCCCTCTTTTC...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR CCA 90 bp CAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGCTCAGTTTCGGACCATACTaGGGAGAAGCAGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: QSFLTLLSPGPFQLFCKLSFGPY*GEAEKA
Trigger: GGCCTTTTCTGCTTCTCCCCAGTATGGTCCGAAACT...GAGCTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp TATAGTCAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: YSQTQKLHSVRTVVTLKENACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...CTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR CCA 90 bp CATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGAGATAGAGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: HSVRTVVTLKEEEGCRDRDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...TCTATCTCTACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000667947.1
CDS-3UTR CCA 90 bp ATCATGTACATAGAGTTTGTTGGTAGCAGTTCGGGGTTACAGGGATACAGGCATGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: IMYIEFVGSSSGLQGYRHDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...ATGCCTGTATCCCTGTAACCCCGAACTGCTACCAACAAACTCTATGTACATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665176.1
CDS-3UTR CCA 90 bp TGCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGATGCATCTCTTCCATCTaGCTGTTCCTGAGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: CRLYRKHGIGIWSASGEGCISSI*LFLSCV
Trigger: GACACAACTCAGGAACAGCCAGATGGAAGAGATGCA...TCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR CCA 90 bp CCCAGGTACAGGATGCAAGCTGCCTGTGGATCTACCATTCTGGAGTCTGGAGGGCAGGACCACCATTTGTaGACTTACCAAATTCCTTAT +
Preference number: 4 (lower is better)
Translates to: PRYRMQAACGSTILESGGQDHHL*TYQIPY
Trigger: ATAAGGAATTTGGTAAGTCCACAAATGGTGGTCCTG...CCCTCCAGACTCCAGAATGGTAGATCCACAGGCAGCTTGCATCCTGTACCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR CCA 90 bp CTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGTGAAGACCTCAGTGCTGTACATGACTCTCAGGCATaGCTGACAGTCCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: LILMLEFCIVAGEDLSAVHDSQA*LTVHLR
Trigger: TCTGAGATGGACTGTCAGCCATGCCTGAGAGTCATG...TACAGCACTGAGGTCTTCACCAGCAACAATGCAGAACTCCAGCATGAGGATGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
CDS-3UTR CCA 90 bp TTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGCCTCCCCAGTAGCTaGGACTACAGGCGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: FSMSWSTFCPGFKLPLLFSLPSS*DYRRAH
Trigger: GTGCGCGCGCCTGTAGTCCCAGCTACTGGGGAGGCT...GAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR TCA 90 bp TCTCTGCAGTGTCAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: SLQCQDQMPTASLSLSLLACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...CAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
CDS-3UTR TCA 90 bp CAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGCTCTCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: QSFLTLLSPGPFQLFCKLSLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...GAGCTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGCTCCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: QSFLTLLSPGPFQLFCKLPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...GAGCTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp TGGTCAGCTTCTGGTGAGGGACTCAGGAAGCTAACAATCATGGTGGTAGGTGAACCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: WSASGEGLRKLTIMVVGEPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...TTCACCTACCACCATGATTGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp AGGCTTATGGCTTGCATCCTCTGGACAGGCAGCCTGAGCTGTATCTGGGGTCCTAACTCATCTACGTTCTaGTATAGAAGTTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RLMACILWTGSLSCIWGPNSSTF*YRSFLF
Trigger: GAAGAGGAAACTTCTATATCAGAACGTAGATGAGTT...AGGACCCCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCATAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp CTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGATTCTGGATTGTTGCTaGGAACAGGTCATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LWPQELTHPHAGVLHCCWILDCC*EQVISS
Trigger: ACTGGAAATGACCTGTTCTCAGCAACAATCCAGAAT...CCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp ATTCATGTAGAGAAAATGACCCCAGAAAGCTATGCCTTCTCAAGCCAGCAATCCTGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: IHVEKMTPESYAFSSQQSCGLRN*LILMLE
Trigger: CTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACA...GGATTGCTGGCTTGAGAAGGCATAGCTTTCTGGGGTCATTTTCTCTACATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000665176.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCCTGCCTCAGCCTTCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: CGNSSQCHGPPFVQALNYPASAF*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGG...GTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR TCA 90 bp ATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGCGGAGAGGTCTTGTAGTTCATCAGTaGGCCTTTGAATCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: MGADMSHGDSGSKRERRGLVVHQ*AFESLH
Trigger: ATGAAGAGATTCAAAGGCTCACTGATGAACTACAAG...ACCTCTCCGCTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000655164.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GATGAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: DETFVGASGQFLQILHFDFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...GTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR TCA 90 bp TTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LGDIHLGSVVTLLNVMVHFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...GTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp GTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCATTTTCAGCTGTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: VALSPSSALVHIEAHFQLFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...CAGCTGAAAATGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR TCA 90 bp GAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTCAGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: EANHRRHTAYSQTQKLHSADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...TGAATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000667947.1
CDS-3UTR TCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGCACCTCACCTTTAAGTaGGAAAAGGAACGCCGACCT +
Preference number: 4 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMHLTFK*EKERRP
Trigger: AGGTCGGCGTTCCTTTTCTCACTTAAAGGTGAGGTG...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000667947.1
CDS-3UTR TCA 90 bp TCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTAGTCAGGCCACATCTTaGATGCTTTGCTGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: SGQFLQILHFDAAGGGFSSQATS*MLCCLE
Trigger: TTCTAAGCAGCAAAGCATTCAAGATGTGGCCTGACT...AGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GAAATCTTTGTGGGAGCTGCCAAGCCTCCTTCACTCTTGCATTCTATGTGCCCACAAAATACTCTCCCTTaGCTCCATGTCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: EIFVGAAKPPSLLHSMCPQNTLP*LHVPHP
Trigger: TGGATGTGGGACATGGAGTCAAGGGAGAGTATTTTG...TGGGCACATAGAATGCAAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GTAGGTGAAATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGAGCACTCCAACTTCATaGCCTCTGATGTTGAGGATA +
Preference number: 4 (lower is better)
Translates to: VGEMGADMSHGDSGSKRESTPTS*PLMLRI
Trigger: TATCCTCAACATCAGAGGTCATGAAGTTGGAGTGCT...CTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCATTTCACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000663866.1
ENST00000671281.1
CDS-3UTR TCA 90 bp ATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCGCACTTCAGCCTGGGTaGCAGAGTAAGAGACTCCGT +
Preference number: 4 (lower is better)
Translates to: IHLGSVVTLLNVMVHLLSALQPG*QSKRLR
Trigger: ACGGAGTCTCTTACTCTGTCACCCAGGCTGAAGTGC...GGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR GCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTAACTTCTGTTGGGCATaGTTTAGTTCAATCTTTATC +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLNFCWA*FSSIFI
Trigger: GATAAAGATTGAACTAAAGCATGCCCAACAGAAGTT...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342022.8
ENST00000657597.1
CDS-3UTR GCA 90 bp AGGCTTATGGCTTGCATCCTCTGGACAGGCAGCCTGAGCTGTATCTGGGGTCCTATCTTTTCCTCTAGCTaGTGCTTCTCTGAAATACAA +
Preference number: 4 (lower is better)
Translates to: RLMACILWTGSLSCIWGPIFSSS*CFSEIQ
Trigger: TTGTATTTCAGAGAAGCAGCAGCTAGAGGAAAAGAT...AGGACCCCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCATAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp GAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTGTAAGGTTCTCACTTaGCTGTGTAACTCATCTACG +
Preference number: 4 (lower is better)
Translates to: ELQDSSCKFSTLTLQEVACKVLT*LCNSST
Trigger: CGTAGATGAGTTACACAGGCAAGTGAGAACCTTACA...AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR GCA 90 bp TCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTGCTGCTAGCTGCAGGTaGCTACGGAGACCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: SMSWSTFCPGFKLPLLFSAASCR*LRRPGR
Trigger: ACGCCCAGGTCTCCGTAGGCACCTGCAGCTAGCAGC...ACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000657597.1
ENST00000660938.1
ENST00000665812.1
ENST00000667205.1
CDS-3UTR GCA 90 bp TGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCGCTCAGCTGCTAGCTaGAGGTGCCTACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: CGNSSQCHGPPFVQALNYRSAAS*RCLRRP
Trigger: AGGTCTCCGTAGGCACCTGCAGCTAGCAGCTGAGCG...GTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: YPFGICGNSSQCHGPPFVSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...GACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TTATTTCCTACCTTAAGTCAGGATTCTGTGGGGTTTAGAGTTGAAGGAGTGGCAAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: LFPTLSQDSVGFRVEGVASRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...TGCCACTCCTTCAACTCTAAACCCCACAGAATCCTGACTTAAGGTAGGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665176.1
CDS-3UTR GCA 90 bp TTAATTGGCTTACAGATATGCAGACTATACAGGAAGCATGGTATCGGCATCTGGCACGTAGGGGAAAGCTaGCCCTCCGTGGACTTCGTA +
Preference number: 4 (lower is better)
Translates to: LIGLQICRLYRKHGIGIWHVGES*PSVDFV
Trigger: TACGAAGTCCACGGAGGGGCAGCTTTCCCCTACGTG...CCAGATGCCGATACCATGCTTCCTGTATAGTCTGCATATCTGTAAGCCAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671281.1
CDS-3UTR GCA 90 bp CAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGCTCGAGAGAGCGGAGAGGTaGCACACACTTTTAAACATC +
Preference number: 4 (lower is better)
Translates to: QSFLTLLSPGPFQLFCKLERAER*HTLLNI
Trigger: GATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTC...GAGCTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR GCA 90 bp GCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGACATTTCCCCTCAGCATTaGCCTATTAGAACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ADYTGSMVSASGQLLVRDISPQH*PIRTSL
Trigger: CAGAGAAGTTCTAATAGGGCAATGCTGAGGGGAAAT...GTCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp AGGGTTCTGCCTGGGCACCCAGGCTATCTCTCACATCATCTGAAATCTTTGTGGGCCATTAATGAGGGATaGACTCCAATGACCCAAACA +
Preference number: 4 (lower is better)
Translates to: RVLPGHPGYLSHHLKSLWAINEG*TPMTQT
Trigger: TGTTTGGGTCATTGGAGTGCATCCCTCATTAATGGC...CCACAAAGATTTCAGATGATGTGAGAGATAGCCTGGGTGCCCAGGCAGAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp AGGCTTATGGCTTGCATCCTCTGGACAGGCAGCCTGAGCTGTATCTGGGGTCCTGAGACTACAGGTGTATaGCAACACATCCAATTAATT +
Preference number: 4 (lower is better)
Translates to: RLMACILWTGSLSCIWGPETTGV*QHIQLI
Trigger: AATTAATTGGATGTGTTGGCATACACCTGTAGTCTC...AGGACCCCAGATACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCATAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp GCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTCTCTCCTCTGCGCTGAGTTCATGCCATTaGACTCCAACCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ASMPPFWNRKLLKILSSALSSCH*TPTWAT
Trigger: TGTTGCCCAGGTTGGAGTGCAATGGCATGAACTCAG...CGCAGAGGAGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000670783.1
CDS-3UTR GCA 90 bp GCTGGAGTGCAGTGGTGCTATCGCAGGTTCACGCCATTCTCCTGCCTCAGCCTTAAGAAAAGAACTACATaGACAAAGACCTTCAACACA +
Preference number: 4 (lower is better)
Translates to: AGVQWCYRRFTPFSCLSLKKRTT*TKTFNT
Trigger: TGTGTTGAAGGTCTTTGTGCATGTAGTTCTTTTCTT...AAGGCTGAGGCAGGAGAATGGCGTGAACCTGCGATAGCACCACTGCACTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR GCA 90 bp TGCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGATCTCCAGATGATGGATaGAGAGTTCCTCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: CRLYRKHGIGIWSASGEGSPDDG*RVPLSL
Trigger: AAGAGACAGAGGAACTCTGCATCCATCATCTGGAGA...TCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666893.1
CDS-3UTR CCA 90 bp AATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTCTTCTGCCCCTCTCTTaGAAAACTGCCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: NLEPVQILVKLLYFPLLVLLPLS*KTALLY
Trigger: GTAAAGGAGGGCAGTTTTCCAAGAGAGGGGCAGAAG...AACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000509712.6
CDS-3UTR CCA 90 bp CAGCAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGGAGTTGCATAGAATCTaGAGCCGGTGCAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: QQSFLTLLSPGPFQLFCKELHRI*SRCKFW
Trigger: CCAGAATTTGCACCGGCTCCAGATTCTATGCAACTC...CTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR CCA 90 bp GGAGCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAGAGTTGCATAGAATCTaGAGCCGGTGCAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: GARESGEVPHTFKHLDLAELHRI*SRCKFW
Trigger: CCAGAATTTGCACCGGCTCCAGATTCTATGCAACTC...TGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR CCA 90 bp GAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTGACTCATCCTCATGCTaGAGTTCTGCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ESGAGANSGEVVVLPLAGDSSSC*SSALLL
Trigger: CAGCAACAATGCAGAACTCCAGCATGAGGATGAGTC...ACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR CCA 90 bp CCCCAGAAAGCTATGCCTTCTCAAGCCAGCAATCCAGGACTAGTTAGGCAGCCAATTCAGGCTCTAACATaGAAGCCTCAATCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: PQKAMPSQASNPGLVRQPIQALT*KPQSVL
Trigger: GAGAACAGATTGAGGCTTCCATGTTAGAGCCTGAAT...TGGCTGCCTAACTAGTCCTGGATTGCTGGCTTGAGAAGGCATAGCTTTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664192.1
ENST00000670783.1
CDS-3UTR CCA 90 bp AGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCGAAAAGAGGGGAGAATaGGTGCTTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SCIESGAGANSGEVVVLPEKRGE*VLSSLG
Trigger: CCCCAAGGAGGAAAGCACCCATTCTCCCCTCTTTTC...GGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR CCA 90 bp GCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATAGAAAAGAGGGGAGAATaGGTGCTTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ARESGEVPHTFKHLDLAIEKRGE*VLSSLG
Trigger: CCCCAAGGAGGAAAGCACCCATTCTCCCCTCTTTTC...TATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGGAAAAGAGGGGAGAATaGGTGCTTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSREKRGE*VLSSLG
Trigger: CCCCAAGGAGGAAAGCACCCATTCTCCCCTCTTTTC...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp CAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTGAAAAGAGGGGAGAATaGGTGCTTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QKLHSVRTVVTLKEEEGCEKRGE*VLSSLG
Trigger: CCCCAAGGAGGAAAGCACCCATTCTCCCCTCTTTTC...ACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR CCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGAGTTTCGGACCATACTaGGGAGAAGCAGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMSFGPY*GEAEKA
Trigger: GGCCTTTTCTGCTTCTCCCCAGTATGGTCCGAAACT...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR CCA 90 bp ATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGACCACTCACTTTCAAACATTTAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: MPTASLSLSLLTTHFQTFNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...AAATGTTTGAAAGTGAGTGGTCAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000477155.6
ENST00000658812.1
CDS-3UTR CCA 90 bp CAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGCTCAATACTAAATGCTTGTaGCAGCTGGGTCCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QSFLTLLSPGPFQLFCKLNTKCL*QLGPGK
Trigger: TTTCCCCGGACCCAGCTGCCACAAGCATTTAGTATT...GAGCTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp CAGCAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGAATACTAAATGCTTGTaGCAGCTGGGTCCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QQSFLTLLSPGPFQLFCKNTKCL*QLGPGK
Trigger: TTTCCCCGGACCCAGCTGCCACAAGCATTTAGTATT...CTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp TATAGTCAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: YSQTQKLHSVRTVVTLKEDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...CTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000667947.1
CDS-3UTR CCA 90 bp TCTCTGCAGTGTCAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGGACTCTACTCTCCCCTaGTCCCTTCCAACTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SLQCQDQMPTASLSLSLLDSTLP*SLPTVL
Trigger: CAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTC...CAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000658812.1
CDS-3UTR CCA 90 bp AGGAAGCTCACAATCATGATGGTAGGTGAAGTGGGAGCAGACATGTCATATGGTAGCCACCAAGGCTTATaGCTTGCATCCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RKLTIMMVGEVGADMSYGSHQGL*LASSGQ
Trigger: CTGTCCAGAGGATGCAAGCCATAAGCCTTGGTGGCT...ACCATATGACATGTCTGCTCCCACTTCACCTACCATCATGATTGTGAGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp AGCAGATGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGATACCATTCTGGAGTCTaGAGGGCAGTGGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: SRWIKGQTTDETFVGASGYHSGV*RAVAHF
Trigger: GAAGTGGGCCACTGCCCTCCAGACTCCAGAATGGTA...TCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp TCAGCAGGGCAGTCATTAAATCTTAAAGCTCCAAAATACTCTCCCTTGACTCCAAGGCTCCCAAGGCCTTaGGTAGCTCTTCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SAGQSLNLKAPKYSPLTPRLPRP*VALLLW
Trigger: CCACAGGAGAAGAGCTACCCAAGGCCTTGGGAGCCT...TGGAGTCAAGGGAGAGTATTTTGGAGCTTTAAGATTTAATGACTGCCCTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp CACTTTGACGCTGCAGGAGGTGGCTTCTCTGTGATTTCTGAACTTCTGGATTTAAGGTTGCTGAATATGTaGAGGTCCTGGGAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HFDAAGGGFSVISELLDLRLLNM*RSWEGG
Trigger: ACCACCCTCCCAGGACCTCCACATATTCAGCAACCT...TAAATCCAGAAGTTCAGAAATCACAGAGAAGCCACCTCCTGCAGCGTCAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR TCA 90 bp TATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCATCTCGATTCTGTTGTaGGCCCTCCTCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: YPFGICGNSSQCHGPPFVISILL*ALLLLP
Trigger: GGGCAGAAGGAGGAGGGCTCACAACAGAATCGAGAT...GACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR TCA 90 bp GATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGATCTCGATTCTGTTGTaGGCCCTCCTCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: DIHLGSVVTLLNVMVHLLISILL*ALLLLP
Trigger: GGGCAGAAGGAGGAGGGCTCACAACAGAATCGAGAT...CAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR TCA 90 bp CAAACTGCCTCCACAGGTATTAGACCAATTTATACTCCCAACAGCATTGTGAGTGGCACCACTGTCATCTaGACTATCCCCAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QTASTGIRPIYTPNSIVSGTTVI*TIPRAL
Trigger: CAGAGCTCTGGGGATAGTTCAGATGACAGTGGTGCC...ACTCACAATGCTGTTGGGAGTATAAATTGGTCTAATACCTGTGGAGGCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509712.6
CDS-3UTR TCA 90 bp TCTCTGCAGTGTCAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGCGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLQCQDQMPTASLSLSLLRCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...CAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp CCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: PFGICGNSSQCHGPPFVQACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...CTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp AATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: NLEPVQILVKLLYFPLLVPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...AACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
CDS-3UTR TCA 90 bp ATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGCGGAGAGGTAAATACAAGTGTCTGTaGGACAGACTTTATGAGCAT +
Preference number: 4 (lower is better)
Translates to: MGADMSHGDSGSKRERRGKYKCL*DRLYEH
Trigger: ATGCTCATAAAGTCTGTCTCACAGACACTTGTATTT...ACCTCTCCGCTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: DIHLGSVVTLLNVMVHLLCGLRN*LILMLE
Trigger: CTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACA...CAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp GGAACAGGAAACTCCTTAAGATTCTCTCCTCTGCGAATATGGATGCTCCTTATATGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GTGNSLRFSPLRIWMLLICGLRN*LILMLE
Trigger: CTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACA...TATAAGGAGCATCCATATTCGCAGAGGAGAGAATCTTAAGGAGTTTCCTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCTTGAAGACTCTTGGGTaGTATCCATTTGGGATCTGT +
Preference number: 4 (lower is better)
Translates to: WRERSQLASMPPFWNRKLLKTLG*YPFGIC
Trigger: ACAGATCCCAAATGGATATCACCCAAGAGTCTTCAA...GAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
CDS-3UTR TCA 90 bp GCCTTCTCTGCAGTGTCAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTCCTCATCCAGTCTCTaGTTTTGTTCCTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: AFSAVSRPDANCFSLSLSSSSSL*FCSFAF
Trigger: GAAAGCAAAGGAACAAAATCAGAGACTGGATGAGGA...AGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
CDS-3UTR TCA 90 bp CAGCATCAAGCCATTTATGAGGGACCCACCCCCATGACAAAACCACCTCCTGTTAGTTGCTTATTCTCTTaGGATTCACACACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QHQAIYEGPTPMTKPPPVSCLFS*DSHTSP
Trigger: AGGAGAGGTGTGTGAATCTCAAGAGAATAAGCAACT...AACAGGAGGTGGTTTTGTCATGGGGGTGGGTCCCTCATAAATGGCTTGATGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp TATCCATGTAAAGTACCCTGCTCTGGATGGAAGATATCGTCCATTTGTTGCTGTTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: YPCKVPCSGWKISSICCCFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...ACAGCAACAAATGGACGATATCTTCCATCCAGAGCAGGGTACTTTACATGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
CDS-3UTR TCA 90 bp TATAGTCAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: YSQTQKLHSVRTVVTLKEFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...CTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR TCA 90 bp TTATTTCCTACCTTAAGTCAGGATTCTGTGGGGTTTAGAGTTGAAGGAGTGGCATTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LFPTLSQDSVGFRVEGVAFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...TGCCACTCCTTCAACTCTAAACCCCACAGAATCCTGACTTAAGGTAGGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665176.1
CDS-3UTR TCA 90 bp GATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: DIHLGSVVTLLNVMVHLLFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...CAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp GTGCCACACACTTTTAAACATCTAGATCTCGCAATAATTCATTATCGTGAGGACGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: VPHTFKHLDLAIIHYREDADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...GTCCTCACGATAATGAATTATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAACACAGGGGACTTCTaGGAGGCTGGGAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: QKLHSVRTVVTLKEEEGCNTGDF*EAGNFL
Trigger: CAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTT...ACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR TCA 90 bp GCCTTCTCTGCAGTGTCAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTACCATCAAGAAATCTTaGGGCTTTTCCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AFSAVSRPDANCFSLSLSTIKKS*GFSCSL
Trigger: GAGAGAACAGGAAAAGCCTCAAGATTTCTTGATGGT...AGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509712.6
CDS-3UTR TCA 90 bp TGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTCTCCCAACAGCATTGTaGGTGCACCTAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CIESGAGANSGEVVVLPLLPTAL*VHLVSP
Trigger: TGGAGAAACTAGGTGCACTCACAATGCTGTTGGGAG...AAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509712.6
CDS-3UTR TCA 90 bp TTAATTGGCTTACAGATATGCAGACTATACAGGAAGCATGGTATCGGCATCTGGAGCAGCAGTCCTTTCTaGCTCTACTCTCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LIGLQICRLYRKHGIGIWSSSPF*LYSPLV
Trigger: GACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTGCT...CCAGATGCCGATACCATGCTTCCTGTATAGTCTGCATATCTGTAAGCCAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp TTTCAAACAACCAGATCTCATGAAGAGCACACTCACTATTATGAGGACAGCACCGTATCTGGGGTCCTTTaGGCCACAGCTGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: FQTTRSHEEHTHYYEDSTVSGVL*ATAGAV
Trigger: TACAGCTCCAGCTGTGGCTCAAAGGACCCCAGATAC...GGTGCTGTCCTCATAATAGTGAGTGTGCTCTTCATGAGATCTGGTTGTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp TCCACCCATGACCCCTCAAATTGCATGTCTTTCTCACACTACAAGATACAATCACTTTCCCCTGGGCCATaGGCTTGGAAGCCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: STHDPSNCMSFSHYKIQSLSPGP*AWKPEN
Trigger: GTTTTCAGGCTTCCAAGCTCATGGCCCAGGGGAAAG...TGATTGTATCTTGTAGTGTGAGAAAGACATGCAATTTGAGGGGTCATGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR TCA 90 bp CTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTCTCTCCTCTAGGCAGAGGTTGCAGTaGGCTGAGTTCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: LASMPPFWNRKLLKILSSRQRLQ*AEFMPL
Trigger: CAATGGCATGAACTCAGCTCACTGCAACCTCTGCCT...AGAGGAGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCATTTTCAGCTGAGTTGCTAGTTAGGCAGCCATaGCTCTCAGGCATGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FKSKFCPRSYRSSFSAELLVRQP*LSGMAD
Trigger: GTCAGCCATGCCTGAGAGTCATGGCTGCCTAACTAG...CAACTCAGCTGAAAATGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000664192.1
ENST00000670783.1
CDS-3UTR GCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTCTCCAGATGATGGATaGTGGGCACCACTGTCATCT +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLSPDDG*WAPLSS
Trigger: AGATGACAGTGGTGCCCAGCATCCATCATCTGGAGA...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR GCA 90 bp TGGTCAGCTTCTGGTGAGGGACTCAGGAAGCTAACAATCATGGTGGTAGGTGAACATTTTCAGCTGAGTTaGATAGAATCTGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: WSASGEGLRKLTIMVVGEHFQLS*IESGAG
Trigger: ACCGGCTCCAGATTCTATGCAACTCAGCTGAAAATG...TTCACCTACCACCATGATTGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR GCA 90 bp TCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTTTTAAGTCCAAGTTCTaGCCTCGTTCATATCGAAGC +
Preference number: 4 (lower is better)
Translates to: SGQFLQILHFDAAGGGFSFKSKF*PRSYRS
Trigger: GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAA...AGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR GCA 90 bp TGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCTTTAAGTCCAAGTTCTaGCCTCGTTCATATCGAAGC +
Preference number: 4 (lower is better)
Translates to: WRERSQLASMPPFWNRKLFKSKF*PRSYRS
Trigger: GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAA...GAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR GCA 90 bp GCCTTCTCTGCAGTGTCAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTGTAAGGTTCTCACTTaGCTGTGTAACTCATCTACG +
Preference number: 4 (lower is better)
Translates to: AFSAVSRPDANCFSLSLSCKVLT*LCNSST
Trigger: CGTAGATGAGTTACACAGGCAAGTGAGAACCTTACA...AGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGAAGGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
CDS-3UTR GCA 90 bp GTAGGTGAAATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGTGTAAGGTTCTCACTTaGCTGTGTAACTCATCTACG +
Preference number: 4 (lower is better)
Translates to: VGEMGADMSHGDSGSKRECKVLT*LCNSST
Trigger: CGTAGATGAGTTACACAGGCAAGTGAGAACCTTACA...CTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCATTTCACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR GCA 90 bp GCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGTGAAGAGAGCTTCCTTCTCTTaGTGTAGCTTAGATAGCTTC +
Preference number: 4 (lower is better)
Translates to: ASGTDSSSCWSSALLLVKRASFS*CSLDSF
Trigger: GAAGCTATCTAAGCTACAGCAAGAGAAGGAAGCTCT...CTTCACCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR GCA 90 bp CACTTCTCTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTCTAAGAAGCCAATCTaGTGTGTGAGACGAAGACTA +
Preference number: 4 (lower is better)
Translates to: HFSVASGTDSSSCWSSALSKKPI*CVRRRL
Trigger: TAGTCTTCGTCTCACACAGCAGATTGGCTTCTTAGA...CAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGAGAAGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR GCA 90 bp CAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGACCACTCACTTTGCCAGCTTGCCTCTATaGCACCATTTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: QDQMPTASLSLSLLTTHFASLPL*HHFGTG
Trigger: TCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGC...AAAGTGAGTGGTCAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
CDS-3UTR GCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGGCCAGCTTGCCTCTATaGCACCATTTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRASLPL*HHFGTG
Trigger: TCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGC...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp AGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGACCACTCACTTTCAGCCAGCTTGCCTCTATaGCACCATTTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: RPDANCFSLSLSFDHSLSASLPL*HHFGTG
Trigger: TCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGC...TGAAAGTGAGTGGTCAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
CDS-3UTR GCA 90 bp GATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATTCAGAGTGGCGCTCAGCTGCTAGCTaGAGGTGCCTACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: DLERRIIQTISEVKYSEWRSAAS*RCLRRP
Trigger: AGGTCTCCGTAGGCACCTGCAGCTAGCAGCTGAGCG...CCACTCTGAATACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655164.1
ENST00000658812.1
CDS-3UTR GCA 90 bp TCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTCGCTCAGCTGCTAGCTaGAGGTGCCTACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: SMSWSTFCPGFKLPLLFSRSAAS*RCLRRP
Trigger: AGGTCTCCGTAGGCACCTGCAGCTAGCAGCTGAGCG...ACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTCGCTCAGCTGCTAGCTaGAGGTGCCTACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: SSQCHGPPFVQALNYHFCRSAAS*RCLRRP
Trigger: AGGTCTCCGTAGGCACCTGCAGCTAGCAGCTGAGCG...ACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp GAGAAGCCACATTTATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: EKPHLCIQPQNSVNTQDSSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...AGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACATAAATGTGGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
CDS-3UTR GCA 90 bp AGTAAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: SKLLCCFKSKFCPRSYRSSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR GCA 90 bp GAGAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: EKQTIEGILHIVKRRNCISRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...AATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR GCA 90 bp AAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCACACGTAGGGGAAAGCTaGCCCTCCGTGGACTTCGTA +
Preference number: 4 (lower is better)
Translates to: KLLCCFKSKFCPRSYRSSHVGES*PSVDFV
Trigger: TACGAAGTCCACGGAGGGGCAGCTTTCCCCTACGTG...TGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR GCA 90 bp GAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTGTATTTCGGGATTCAAGGTTCTaGATGACGAACATCGGCCAA +
Preference number: 4 (lower is better)
Translates to: EPVQILVKLLYFPLLVVFRDSRF*MTNIGQ
Trigger: TTGGCCGATGTTCGTCATGCAGAACCTTGAATCCCG...AAATACAACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR GCA 90 bp CACTTTGACGCTGCAGGAGGTGGCTTCTCTGTGATTTCTGAACTTCTGGATTTACGGGATTCAAGGTTCTaGATGACGAACATCGGCCAA +
Preference number: 4 (lower is better)
Translates to: HFDAAGGGFSVISELLDLRDSRF*MTNIGQ
Trigger: TTGGCCGATGTTCGTCATGCAGAACCTTGAATCCCG...TAAATCCAGAAGTTCAGAAATCACAGAGAAGCCACCTCCTGCAGCGTCAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR GCA 90 bp AGCAGATGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGACTGGGATTCTTTCTCTaGCACATGGCCAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SRWIKGQTTDETFVGASGLGFFL*HMARLQ
Trigger: TTGCAGCCTGGCCATGTGGCAGAGAAAGAATCCCAG...TCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp TTAATTGGCTTACAGATATGCAGACTATACAGGAAGCATGGTATCGGCATCTGGCCAAGGCTTATGGCTTaGATCCTCTGGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LIGLQICRLYRKHGIGIWPRLMA*ILWTGS
Trigger: GCTGCCTGTCCAGAGGATGCAAGCCATAAGCCTTGG...CCAGATGCCGATACCATGCTTCCTGTATAGTCTGCATATCTGTAAGCCAATTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp TTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCATTTTCAGCTGAGTTGCCAAGGCTTATGGCTTaGATCCTCTGGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FKSKFCPRSYRSSFSAELPRLMA*ILWTGS
Trigger: GCTGCCTGTCCAGAGGATGCAAGCCATAAGCCTTGG...CAACTCAGCTGAAAATGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666893.1
CDS-3UTR GCA 90 bp AATCTTAAAGCTCCAAAATACTCTCCCTTGACTCCATGTCCCACATCCAGGGCAAAGGTCAAGCTCAAATaGCTTGGCCTCCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: NLKAPKYSPLTPCPTSRAKVKLK*LGLPNC
Trigger: GCAGTTTGGGAGGCCAAGGCATTTGAGCTTGACCTT...TGCCCTGGATGTGGGACATGGAGTCAAGGGAGAGTATTTTGGAGCTTTAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTCTGCCCCTCTCTTaGAAAACTGCCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRLLPLS*KTALLY
Trigger: GTAAAGGAGGGCAGTTTTCCAAGAGAGGGGCAGAAG...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR CCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCCAGATGATGGATGCTaGGCACCACTGTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRPDDGC*APLSSE
Trigger: TTCAGATGACAGTGGTGCCCAGCATCCATCATCTGG...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR CCA 90 bp GTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCATTTTCAGCTGGAAAAGAGGGGAGAATaGGTGCTTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VALSPSSALVHIEAHFQLEKRGE*VLSSLG
Trigger: CCCCAAGGAGGAAAGCACCCATTCTCCCCTCTTTTC...CAGCTGAAAATGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR CCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTAGTTTCGGACCATACTaGGGAGAAGCAGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLSFGPY*GEAEKA
Trigger: GGCCTTTTCTGCTTCTCCCCAGTATGGTCCGAAACT...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp GAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTGTATTTAGTTTCGGACCATACTaGGGAGAAGCAGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: EPVQILVKLLYFPLLVVFSFGPY*GEAEKA
Trigger: GGCCTTTTCTGCTTCTCCCCAGTATGGTCCGAAACT...AAATACAACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR CCA 90 bp TCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: SSQCHGPPFVQALNYHFCNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...ACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp TCTAAGAAGCCAATCTGCTGTGTGAGACGAAGACTATTTTCCTGTAATTGCTTAAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: SKKPICCVRRRLFSCNCLNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...TAAGCAATTACAGGAAAATAGTCTTCGTCTCACACAGCAGATTGGCTTCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
CDS-3UTR CCA 90 bp CATGATCGGAAATGGTCATCTGAAACCACAGCTTACCTAATTTACATTGTTCCTAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: HDRKWSSETTAYLIYIVPNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...AGGAACAATGTAAATTAGGTAAGCTGTGGTTTCAGATGACCATTTCCGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667947.1
CDS-3UTR CCA 90 bp TCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTATAGCTAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: SWSTFCPGFKLPLLFSIANACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...AGCTATACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp AATCTCTTCTTGCTTGAAATACCTAGAGTAGATTCTACTTTCCTGACTGAACCCAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: NLFLLEIPRVDSTFLTEPNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...GGGTTCAGTCAGGAAAGTAGAATCTACTCTAGGTATTTCAAGCAAGAAGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp AAGGAACACAGGGGACTTCTGAGAGGCTGGGAATTTCTTGTGGTGAGTGGTATAAATACTAAATGCTTGTaGCAGCTGGGTCCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KEHRGLLRGWEFLVVSGINTKCL*QLGPGK
Trigger: TTTCCCCGGACCCAGCTGCCACAAGCATTTAGTATT...TATACCACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR CCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGAATACTAAATGCTTGTaGCAGCTGGGTCCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMNTKCL*QLGPGK
Trigger: TTTCCCCGGACCCAGCTGCCACAAGCATTTAGTATT...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR CCA 90 bp AATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTAATACTAAATGCTTGTaGCAGCTGGGTCCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: NLEPVQILVKLLYFPLLVNTKCL*QLGPGK
Trigger: TTTCCCCGGACCCAGCTGCCACAAGCATTTAGTATT...AACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR CCA 90 bp CAGCAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGGTAATTCCAGCATTTTaGGAGGACAAGACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QQSFLTLLSPGPFQLFCKVIPAF*EDKTGG
Trigger: TCCTCCTGTCTTGTCCTCCCAAAATGCTGGAATTAC...CTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp AAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCAGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: KLLCCFKSKFCPRSYRSSDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...TGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR CCA 90 bp AAGGAACACAGGGGACTTCTGAGAGGCTGGGAATTTCTTGTGGTGAGTGGTATAGGACTTCTGAGAGGCTaGGAATTTCTTGTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: KEHRGLLRGWEFLVVSGIGLLRG*EFLVVS
Trigger: ACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCC...TATACCACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR CCA 90 bp CAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTAGCTATCACCATCACCTaGCTGCCAAACACCATCAAG +
Preference number: 4 (lower is better)
Translates to: QLSCIESGAGANSGEVVVAITIT*LPNTIK
Trigger: CTTGATGGTGTTTGGCAGCCAGGTGATGGTGATAGC...TACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509712.6
CDS-3UTR CCA 90 bp GCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATAGACTCTACTCTCCCCTaGTCCCTTCCAACTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ARESGEVPHTFKHLDLAIDSTLP*SLPTVL
Trigger: CAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTC...TATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR CCA 90 bp CTACCATTCTGGAGTCTGGAGGGCAGTGGCCCACTTCTTATAGCTCCACTAGGCGTGAAGTATTCAGAGTaGTACGAGTATAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LPFWSLEGSGPLLIAPLGVKYSE*YEYRKK
Trigger: CTTCTTTCTATACTCGTACCACTCTGAATACTTCAC...GCCTAGTGGAGCTATAAGAAGTGGGCCACTGCCCTCCAGACTCCAGAATGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp TGGTCAGCTTCTGGTGAGGGACTCAGGAAGCTAACAATCATGGTGGTAGGTGAACTTTTCCCATTGTCTTaGATACTAGCACTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: WSASGEGLRKLTIMVVGELFPLS*ILALGS
Trigger: GGAGCCAAGTGCTAGTATCCAAGACAATGGGAAAAG...TTCACCTACCACCATGATTGTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp TTTCAAACAACCAGATCTCATGAAGAGCACACTCACTATTATGAGGACAGCACCCAAGCTCAAATGCCTTaGCCTCCCAAACTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: FQTTRSHEEHTHYYEDSTQAQMP*PPKLPG
Trigger: TCCCGGCAGTTTGGGAGGCCAAGGCATTTGAGCTTG...GGTGCTGTCCTCATAATAGTGAGTGTGCTCTTCATGAGATCTGGTTGTTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp CATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGAGATAGACAGGCTGGAATGCAATaGTGCAACCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HSVRTVVTLKEEEGCRDRQAGMQ*CNLGSL
Trigger: CAGTGAGCCAAGGTTGCACCATTGCATTCCAGCCTG...TCTATCTCTACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670292.1
CDS-3UTR CCA 90 bp CAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGCATTCCTCACCAGTaGGGAACAGAACTTCGATCA +
Preference number: 4 (lower is better)
Translates to: QTQKLHSVRTVVTLKEEEGIPHQ*GTELRS
Trigger: TGATCGAAGTTCTGTTCCCCACTGGTGAGGAATGCC...TTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670292.1
CDS-3UTR TCA 90 bp TGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACATCTCGATTCTGTTGTaGGCCCTCCTCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: CGNSSQCHGPPFVQALNYISILL*ALLLLP
Trigger: GGGCAGAAGGAGGAGGGCTCACAACAGAATCGAGAT...GTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR TCA 90 bp ATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATGGCACCACTGTCATCTaGACTATCCCCAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ICGNSSQCHGPPFVQALNGTTVI*TIPRAL
Trigger: CAGAGCTCTGGGGATAGTTCAGATGACAGTGGTGCC...ATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR TCA 90 bp TTTCCTACCTTAAGTCAGGATTCTGTGGGGTTTAGAGTTGAAGGAGTGGCAAGGCGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: FPTLSQDSVGFRVEGVARRCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...CCTTGCCACTCCTTCAACTCTAAACCCCACAGAATCCTGACTTAAGGTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000665176.1
ENST00000670783.1
CDS-3UTR TCA 90 bp CCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGCGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PFGICGNSSQCHGPPFVQRCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...CTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp TTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: LGDIHLGSVVTLLNVMVHACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...GTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp AGCAGATGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGAGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: SRWIKGQTTDETFVGASGACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...TCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCATCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CTCTTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: LLGDIHLGSVVTLLNVMVACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...GACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp GCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTGTATTTTAGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: AGANSGEVVVLPLAGCILACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...TAAAATACAACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR TCA 90 bp GATGAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: DETFVGASGQFLQILHFDACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...GTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp ATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: IHLGSVVTLLNVMVHLLSACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...GGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp CCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGTCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: PFGICGNSSQCHGPPFVQSLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...CTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp AGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCTCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SCIESGAGANSGEVVVLPSLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...GGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
CDS-3UTR TCA 90 bp TTTCCTACCTTAAGTCAGGATTCTGTGGGGTTTAGAGTTGAAGGAGTGGCAAGGTCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: FPTLSQDSVGFRVEGVARSLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...CCTTGCCACTCCTTCAACTCTAAACCCCACAGAATCCTGACTTAAGGTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000665176.1
CDS-3UTR TCA 90 bp CAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTATCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: QLSCIESGAGANSGEVVVSLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...TACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
CDS-3UTR TCA 90 bp CACTTTGACGCTGCAGGAGGTGGCTTCTCTGTGATTTCTGAACTTCTGGATTTATCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: HFDAAGGGFSVISELLDLSLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...TAAATCCAGAAGTTCAGAAATCACAGAGAAGCCACCTCCTGCAGCGTCAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp AGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGACCACTCACTTTCACCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RPDANCFSLSLSFDHSLSPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...TGAAAGTGAGTGGTCAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
CDS-3UTR TCA 90 bp CCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGACCACTCACTTTCAAACCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: PDANCFSLSLSFDHSLSNPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...GTTTGAAAGTGAGTGGTCAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
CDS-3UTR TCA 90 bp GAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: ETFVGASGQFLQILHFDAPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...AGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: PFGICGNSSQCHGPPFVQPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...CTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp GAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTGTGATTTAATGCTCTaGGTGTGTTTAAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: ELQDSSCKFSTLTLQEVACDLML*VCLSTS
Trigger: GGAAGTACTTAAACACACTCAGAGCATTAAATCACA...AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGTGTGATTTAATGCTCTaGGTGTGTTTAAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: LWPQELTHPHAGVLHCCWCDLML*VCLSTS
Trigger: GGAAGTACTTAAACACACTCAGAGCATTAAATCACA...CCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
CDS-3UTR TCA 90 bp GGAGCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAACTTTAGATTTCTCCTaGACCAGCTTTTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: GARESGEVPHTFKHLDLATLDFS*TSFSCR
Trigger: CCTACAGGAAAAGCTGGTTCAGGAGAAATCTAAAGT...TGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CAGCAGTCCTTTCTGACTCTACTCTCCCCTGGTCCCTTCCAACTGTTTTGTAAGACTTTAGATTTCTCCTaGACCAGCTTTTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QQSFLTLLSPGPFQLFCKTLDFS*TSFSCR
Trigger: CCTACAGGAAAAGCTGGTTCAGGAGAAATCTAAAGT...CTTACAAAACAGTTGGAAGGGACCAGGGGAGAGTAGAGTCAGAAAGGACTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTGAACTCATCTACGTTCTaGTATAGAAGTTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QDSSCKFSTLTLQEVASLNSSTF*YRSFLF
Trigger: GAAGAGGAAACTTCTATATCAGAACGTAGATGAGTT...CAGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp AATCGCAAATATTCTTCACGTAGAGCTTCCTTCTCTTGCTGTAGCTTAGATAGCTGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NRKYSSRRASFSCCSLDSCGLRN*LILMLE
Trigger: CTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACA...GCTATCTAAGCTACAGCAAGAGAAGGAAGCTCTACGTGAAGAATATTTGCGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp GCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTCTCTCCTCTGCGAGCCTCAGAATTCTGTaGACACACAAGATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ASMPPFWNRKLLKILSSASLRIL*THKILR
Trigger: CCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCT...CGCAGAGGAGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp GGAGCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCATCCTCATCCAGTCTCTaGTTTTGTTCCTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GARESGEVPHTFKHLDLASSSSL*FCSFAF
Trigger: GAAAGCAAAGGAACAAAATCAGAGACTGGATGAGGA...TGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CAAATAATTCATGTAGAGAAAATGACCCCAGAAAGCTATGCCTTCTCAAGCCAGTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QIIHVEKMTPESYAFSSQFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...CTGGCTTGAGAAGGCATAGCTTTCTGGGGTCATTTTCTCTACATGAATTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000665176.1
CDS-3UTR TCA 90 bp GAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCCAGGTCTTCATTATaGTACTGTAATTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: ELQDSSCKFSTLTLQEVASRSSL*YCNSSI
Trigger: AATGCTGGAATTACAGTATCATAATGAAGACCTGGA...AGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR TCA 90 bp CTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGTCCAGGTCTTCATTATaGTACTGTAATTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: LWPQELTHPHAGVLHCCWSRSSL*YCNSSI
Trigger: AATGCTGGAATTACAGTATCATAATGAAGACCTGGA...CCAGCAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp GTGAAGTATTCAGAGTGGTACGAGTATAGAAAGAAGAAACAGGTTTGTTTGTCTGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: VKYSEWYEYRKKKQVCLSADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...AGACAAACAAACCTGTTTCTTCTTTCTATACTCGTACCACTCTGAATACTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCATTTTCAGCTGCACCTCACCTTTAAGTaGGAAAAGGAACGCCGACCT +
Preference number: 4 (lower is better)
Translates to: VALSPSSALVHIEAHFQLHLTFK*EKERRP
Trigger: AGGTCGGCGTTCCTTTTCTCACTTAAAGGTGAGGTG...CAGCTGAAAATGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR TCA 90 bp AAGGAACACAGGGGACTTCTGAGAGGCTGGGAATTTCTTGTGGTGAGTGGTATATCTCATGTTCCACCCTaGGATGAGATCAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: KEHRGLLRGWEFLVVSGISHVPP*DEISTV
Trigger: AACTGTACTGATCTCATCTCAGGGTGGAACATGAGA...TATACCACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR TCA 90 bp CATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTAGAGATAGAAACACAGGGGACTTCTaGGAGGCTGGGAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: HSVRTVVTLKEEEGCRDRNTGDF*EAGNFL
Trigger: CAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTT...TCTATCTCTACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR TCA 90 bp AAGGAACACAGGGGACTTCTGAGAGGCTGGGAATTTCTTGTGGTGAGTGGTATAGACAGTACCAAGTATTaGAAACCAAGGTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: KEHRGLLRGWEFLVVSGIDSTKY*KPRWRN
Trigger: GTTCCTCCACCTTGGTTTTCAATACTTGGTACTGTC...TATACCACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCCCCTGTGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR TCA 90 bp CAGCATCAAGCCATTTATGAGGGACCCACCCCCATGACAAAACCACCTCCTGTTAGGCTGCAAATTTGCTaGATTTTTATGCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QHQAIYEGPTPMTKPPPVRLQIC*IFMLCF
Trigger: GAAGCAGAGCATAAAAATTCAGCAAATTTGCAGCCT...AACAGGAGGTGGTTTTGTCATGGGGGTGGGTCCCTCATAAATGGCTTGATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp TGCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGAAGGCTGCAAATTTGCTaGATTTTTATGCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CRLYRKHGIGIWSASGEGRLQIC*IFMLCF
Trigger: GAAGCAGAGCATAAAAATTCAGCAAATTTGCAGCCT...TCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp AATCTTAAAGCTCCAAAATACTCTCCCTTGACTCCATGTCCCACATCCAGGGCACAAAATACTCTCCCTTaGCTCCATGTCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: NLKAPKYSPLTPCPTSRAQNTLP*LHVPHP
Trigger: TGGATGTGGGACATGGAGTCAAGGGAGAGTATTTTG...TGCCCTGGATGTGGGACATGGAGTCAAGGGAGAGTATTTTGGAGCTTTAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp CAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTGGATTACATTTCAAGATaGGATTTGGAGGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: QDSSCKFSTLTLQEVASLDYISR*DLEGIK
Trigger: CTTTATCCCCTCCAAATCTCATCTTGAAATGTAATC...CAGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp TCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTAACAACCAGATCTCATaGAGAGCACACTCACTATTA +
Preference number: 4 (lower is better)
Translates to: SGQFLQILHFDAAGGGFSNNQIS*RAHSLL
Trigger: TAATAGTGAGTGTGCTCTTCATGAGATCTGGTTGTT...AGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp TCTTGTGGTGAGTGGTATACACTTACAAGTTGTGCACTTTTGGTAGATATGCTTGCACTCCAACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SCGEWYTLTSCALLVDMLALQPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTTGGAGTGC...AAGCATATCTACCAAAAGTGCACAACTTGTAAGTGTATACCACTCACCACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655845.1
CDS-3UTR TCA 90 bp ATATTTCTTTCTGTTTCTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCGGTAGGATAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: IFLSVSLLEGEKPACLYAGRIIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTATCCTACC...GGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAGAAACAGAAAGAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000660938.1
ENST00000670783.1
CDS-3UTR TCA 90 bp GAACACACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACTTGCCATTGCTACTCTCAGGCATGGCTaGCAGTCCATCTCAGATAGA +
Preference number: 4 (lower is better)
Translates to: EHTRFSGDFSGDFELAIATLRHG*QSISDR
Trigger: TCTATCTGAGATGGACTGTCAGCCATGCCTGAGAGT...AGCAATGGCAAGTTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
CDS-3UTR TCA 90 bp CAAATAATTCATGTAGAGAAAATGACCCCAGAAAGCTATGCCTTCTCAAGCCAGCTAGTTAGGCAGCCATaGCTCTCAGGCATGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QIIHVEKMTPESYAFSSQLVRQP*LSGMAD
Trigger: GTCAGCCATGCCTGAGAGTCATGGCTGCCTAACTAG...CTGGCTTGAGAAGGCATAGCTTTCTGGGGTCATTTTCTCTACATGAATTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000665176.1
ENST00000670783.1
CDS-3UTR GCA 90 bp TGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTAGTGTCAAGACCAGATaGCAACTGCTTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: CIESGAGANSGEVVVLPLSVKTR*QLLLSL
Trigger: GAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACT...AAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000666893.1
ENST00000670783.1
CDS-3UTR GCA 90 bp AGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGACCACTCACTTTCAAGTGTCAAGACCAGATaGCAACTGCTTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RPDANCFSLSLSFDHSLSSVKTR*QLLLSL
Trigger: GAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACT...TGAAAGTGAGTGGTCAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
CDS-3UTR GCA 90 bp AGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCAGTGTCAAGACCAGATaGCAACTGCTTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SCIESGAGANSGEVVVLPSVKTR*QLLLSL
Trigger: GAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACT...GGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000666893.1
ENST00000670783.1
CDS-3UTR GCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTCCTCTCTTGGAAAACTaGCCTCCTTTACTGACTCCT +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLPLLEN*PPLLTP
Trigger: AGGAGTCAGTAAAGGAGGGCAGTTTTCCAAGAGAGG...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR GCA 90 bp GCAGAGCAGTGGTACCCAGTGCTTGGCCCCCTAAACCATTCTTTCCTCCTACGTAAGAGCACATCTTTGTaGTGTCTAATAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AEQWYPVLGPLNHSFLLRKSTSL*CLITSV
Trigger: AACAGAAGTTATTAGACAGCACAAAGATGTGCTCTT...ACGTAGGAGGAAAGAATGGTTTAGGGGGCCAAGCACTGGGTACCACTGCTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp GCAGACTATACAGGAAGCATGGTATCGGCATCTGGTCAGCTTCTGGTGAGGGACATCTTTTCCTCTAGCTaGTGCTTCTCTGAAATACAA +
Preference number: 4 (lower is better)
Translates to: ADYTGSMVSASGQLLVRDIFSSS*CFSEIQ
Trigger: TTGTATTTCAGAGAAGCAGCAGCTAGAGGAAAAGAT...GTCCCTCACCAGAAGCTGACCAGATGCCGATACCATGCTTCCTGTATAGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR GCA 90 bp CAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGCAGGAGGTGGCTTCTCTGATCTTTTCCTCTAGCTaGTGCTTCTCTGAAATACAA +
Preference number: 4 (lower is better)
Translates to: QDSSCKFSTLTLQEVASLIFSSS*CFSEIQ
Trigger: TTGTATTTCAGAGAAGCAGCAGCTAGAGGAAAAGAT...CAGAGAAGCCACCTCCTGCAGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR GCA 90 bp CTCTTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCGCCAGCTTGCCTCTATaGCACCATTTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: LLGDIHLGSVVTLLNVMVASLPL*HHFGTG
Trigger: TCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGC...GACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp AACCACAGCTTACCTAATTTACATTGTTCCTTCTCCTTCACTTGTAGTTCATCACGCTCAGCTGCTAGCTaGAGGTGCCTACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: NHSLPNLHCSFSFTCSSSRSAAS*RCLRRP
Trigger: AGGTCTCCGTAGGCACCTGCAGCTAGCAGCTGAGCG...TGATGAACTACAAGTGAAGGAGAAGGAACAATGTAAATTAGGTAAGCTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667947.1
CDS-3UTR GCA 90 bp TCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: SMSWSTFCPGFKLPLLFSSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...ACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAAGTCGGAAATTTTCCTaGGGAGGGTGCCGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: SQCHGPPFVQALNYHFCSSRKFS*GGCRER
Trigger: ACGCTCGCGGCACCCTCCGCAGGAAAATTTCCGACT...TGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCCACGTAGGGGAAAGCTaGCCCTCCGTGGACTTCGTA +
Preference number: 4 (lower is better)
Translates to: FSMSWSTFCPGFKLPLLFHVGES*PSVDFV
Trigger: TACGAAGTCCACGGAGGGGCAGCTTTCCCCTACGTG...GAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCACACGTAGGGGAAAGCTaGCCCTCCGTGGACTTCGTA +
Preference number: 4 (lower is better)
Translates to: SQCHGPPFVQALNYHFCSHVGES*PSVDFV
Trigger: TACGAAGTCCACGGAGGGGCAGCTTTCCCCTACGTG...TGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR GCA 90 bp TTATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCACGTAGGGGAAAGCTaGCCCTCCGTGGACTTCGTA +
Preference number: 4 (lower is better)
Translates to: LCIQPQNSVNTQDSQETFHVGES*PSVDFV
Trigger: TACGAAGTCCACGGAGGGGCAGCTTTCCCCTACGTG...AAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
CDS-3UTR GCA 90 bp CATGATCGGAAATGGTCATCTGAAACCACAGCTTACCTAATTTACATTGTTCCTCACGTAGGGGAAAGCTaGCCCTCCGTGGACTTCGTA +
Preference number: 4 (lower is better)
Translates to: HDRKWSSETTAYLIYIVPHVGES*PSVDFV
Trigger: TACGAAGTCCACGGAGGGGCAGCTTTCCCCTACGTG...AGGAACAATGTAAATTAGGTAAGCTGTGGTTTCAGATGACCATTTCCGATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667947.1
CDS-3UTR GCA 90 bp CAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTACACGTAGGGGAAAGCTaGCCCTCCGTGGACTTCGTA +
Preference number: 4 (lower is better)
Translates to: QCHGPPFVQALNYHFCSVHVGES*PSVDFV
Trigger: TACGAAGTCCACGGAGGGGCAGCTTTCCCCTACGTG...TACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR GCA 90 bp ATTCATGTAGAGAAAATGACCCCAGAAAGCTATGCCTTCTCAAGCCAGCAATCCCGGGATTCAAGGTTCTaGATGACGAACATCGGCCAA +
Preference number: 4 (lower is better)
Translates to: IHVEKMTPESYAFSSQQSRDSRF*MTNIGQ
Trigger: TTGGCCGATGTTCGTCATGCAGAACCTTGAATCCCG...GGATTGCTGGCTTGAGAAGGCATAGCTTTCTGGGGTCATTTTCTCTACATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000665176.1
CDS-3UTR GCA 90 bp ATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCCGGGATTCAAGGTTCTaGATGACGAACATCGGCCAA +
Preference number: 4 (lower is better)
Translates to: IHLGSVVTLLNVMVHLLSRDSRF*MTNIGQ
Trigger: TTGGCCGATGTTCGTCATGCAGAACCTTGAATCCCG...GGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR GCA 90 bp GCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTCTCTCCTCTGCGTCTCCAGATGATGGATaGTGTAATCCCAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: ASMPPFWNRKLLKILSSASPDDG*CNPSTL
Trigger: CAAAGTGCTGGGATTACAGCATCCATCATCTGGAGA...CGCAGAGGAGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665812.1
CDS-3UTR GCA 90 bp GCAAGAGAGAGCGGAGAGGTGCCACACACTTTTAAACATCTAGATCTCGCAATAGAGAGAGCGGAGAGGTaGCACACACTTTTAAACATC +
Preference number: 4 (lower is better)
Translates to: ARESGEVPHTFKHLDLAIERAER*HTLLNI
Trigger: GATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTC...TATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCACCTCTCCGCTCTCTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR GCA 90 bp CAGCATCAAGCCATTTATGAGGGACCCACCCCCATGACAAAACCACCTCCTGTTAAGCTGTTCTTGCACTaGTATAAAGAAATACCCGAG +
Preference number: 4 (lower is better)
Translates to: QHQAIYEGPTPMTKPPPVKLFLH*YKEIPE
Trigger: CTCGGGTATTTCTTTATAGCAGTGCAAGAACAGCTT...AACAGGAGGTGGTTTTGTCATGGGGGTGGGTCCCTCATAAATGGCTTGATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp AATCTTAAAGCTCCAAAATACTCTCCCTTGACTCCATGTCCCACATCCAGGGCAAATCTTTGTGGGAGCTaGCAAGCCTCCTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: NLKAPKYSPLTPCPTSRANLCGS*QASFTL
Trigger: AAGAGTGAAGGAGGCTTGGCAGCTCCCACAAAGATT...TGCCCTGGATGTGGGACATGGAGTCAAGGGAGAGTATTTTGGAGCTTTAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp TCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATCTTCTCCTGTGGCTTTaGAGGCAGCAGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SARDLERRIIQTISEVKYLLLWL*RQQPLW
Trigger: CCACAGGGGCTGCTGCCTGCAAAGCCACAGGAGAAG...ATACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR GCA 90 bp TTCTGTGAACACACAAGATTCTCAGGAGACTTTTCAGGGGACTTTGAACTTGCCGACCCCAGAAAGCTATaGCTTCTCAAGCCAGCAATC +
Preference number: 4 (lower is better)
Translates to: FCEHTRFSGDFSGDFELADPRKL*LLKPAI
Trigger: GATTGCTGGCTTGAGAAGGCATAGCTTTCTGGGGTC...GGCAAGTTCAAAGTCCCCTGAAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
CDS-3UTR GCA 90 bp GAGAAGCAAACCATAGAAGGCATACTGCATATAGTCAAACGCAGAAACTGCATTTCGCCCAGGCTGGAATaGAATGGTGCAACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EKQTIEGILHIVKRRNCISPRLE*NGATLA
Trigger: AGCCAAGGTTGCACCATTGCATTCCAGCCTGGGCGA...AATGCAGTTTCTGCGTTTGACTATATGCAGTATGCCTTCTATGGTTTGCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670292.1
CDS-3UTR CCA 90 bp ATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCCCAGATGATGGATGCTaGGCACCACTGTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: IHLGSVVTLLNVMVHLLSPDDGC*APLSSE
Trigger: TTCAGATGACAGTGGTGCCCAGCATCCATCATCTGG...GGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR CCA 90 bp CAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTAGAGTTGCATAGAATCTaGAGCCGGTGCAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: QLSCIESGAGANSGEVVVELHRI*SRCKFW
Trigger: CCAGAATTTGCACCGGCTCCAGATTCTATGCAACTC...TACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
ENST00000670783.1
CDS-3UTR CCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTGAGTTGCATAGAATCTaGAGCCGGTGCAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLELHRI*SRCKFW
Trigger: CCAGAATTTGCACCGGCTCCAGATTCTATGCAACTC...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR CCA 90 bp TGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGAGTTGCATAGAATCTaGAGCCGGTGCAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: CIESGAGANSGEVVVLPLELHRI*SRCKFW
Trigger: CCAGAATTTGCACCGGCTCCAGATTCTATGCAACTC...AAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
ENST00000670783.1
CDS-3UTR CCA 90 bp GCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTCTCTTTTTGGGCAGTGATCTaGTCCTGTATTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASLPLCHHFGTGNSLRFSFWAVI*SCIAFS
Trigger: GGAGAAGGCAATACAGGACCAGATCACTGCCCAAAA...AGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR CCA 90 bp TTCTCTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGTTTCTGTTTCTTTGTTaGAGGGAGAGAAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FSVASGTDSSSCWSSALLFLFLC*RERSQL
Trigger: AAGCTGGCTTCTCTCCCTCCAACAAAGAAACAGAAA...CAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR CCA 90 bp CCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGACTCATCCTCATGCTaGAGTTCTGCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PFGICGNSSQCHGPPFVQDSSSC*SSALLL
Trigger: CAGCAACAATGCAGAACTCCAGCATGAGGATGAGTC...CTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTCTTCTCAATGTCATaGTCCACCTTTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRLFSMS*STFCPG
Trigger: GCCTGGACAAAAGGTGGACCATGACATTGAGAAGAG...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR CCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTCTCTTCTCAATGTCATaGTCCACCTTTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLLFSMS*STFCPG
Trigger: GCCTGGACAAAAGGTGGACCATGACATTGAGAAGAG...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR CCA 90 bp TATAGTCAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAAAAGAGGGGAGAATaGGTGCTTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: YSQTQKLHSVRTVVTLKEEKRGE*VLSSLG
Trigger: CCCCAAGGAGGAAAGCACCCATTCTCCCCTCTTTTC...CTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTGACTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
CDS-3UTR CCA 90 bp GATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGGAAAAGAGGGGAGAATaGGTGCTTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: DIHLGSVVTLLNVMVHLLEKRGE*VLSSLG
Trigger: CCCCAAGGAGGAAAGCACCCATTCTCCCCTCTTTTC...CAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp TATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCGAAAAGAGGGGAGAATaGGTGCTTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: YPFGICGNSSQCHGPPFVEKRGE*VLSSLG
Trigger: CCCCAAGGAGGAAAGCACCCATTCTCCCCTCTTTTC...GACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp ACAGATGAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGAAAAGAGGGGAGAATaGGTGCTTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TDETFVGASGQFLQILHFEKRGE*VLSSLG
Trigger: CCCCAAGGAGGAAAGCACCCATTCTCCCCTCTTTTC...AAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTCATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp AGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTAGTTTCGGACCATACTaGGGAGAAGCAGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: RSQLASMPPFWNRKLLKISFGPY*GEAEKA
Trigger: GGCCTTTTCTGCTTCTCCCCAGTATGGTCCGAAACT...AATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000665812.1
CDS-3UTR CCA 90 bp TGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGACAGTTCAGTTTCGGACCATACTaGGGAGAAGCAGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: WIKGQTTDETFVGASGQFSFGPY*GEAEKA
Trigger: GGCCTTTTCTGCTTCTCCCCAGTATGGTCCGAAACT...GAACTGTCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp ATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGTTTCGGACCATACTaGGGAGAAGCAGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: IHLGSVVTLLNVMVHLLSSFGPY*GEAEKA
Trigger: GGCCTTTTCTGCTTCTCCCCAGTATGGTCCGAAACT...GGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp GTTTTTCTCCAGATGATGGATGCTGTTCTCTCTGTTCACCACCCACAGTTTTTCAGTTTCGGACCATACTaGGGAGAAGCAGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: VFLQMMDAVLSVHHPQFFSFGPY*GEAEKA
Trigger: GGCCTTTTCTGCTTCTCCCCAGTATGGTCCGAAACT...GAAAAACTGTGGGTGGTGAACAGAGAGAACAGCATCCATCATCTGGAGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000664418.1
CDS-3UTR CCA 90 bp TCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: SARDLERRIIQTISEVKYNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...ATACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp TTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTATTCAGAGTGGTAAATGCTTGTGGCAGCTaGGTCCGGGGAAAACGGGCG +
Preference number: 4 (lower is better)
Translates to: FGEENHPNYIRSEVFRVVNACGS*VRGKRA
Trigger: CGCCCGTTTTCCCCGGACCCAGCTGCCACAAGCATT...TACCACTCTGAATACTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR CCA 90 bp CCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGAATACTAAATGCTTGTaGCAGCTGGGTCCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PFGICGNSSQCHGPPFVQNTKCL*QLGPGK
Trigger: TTTCCCCGGACCCAGCTGCCACAAGCATTTAGTATT...CTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR CCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGGTAATTCCAGCATTTTaGGAGGACAAGACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMVIPAF*EDKTGG
Trigger: TCCTCCTGTCTTGTCCTCCCAAAATGCTGGAATTAC...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR CCA 90 bp TGGATGCTCCTTATAATTCGCTCTAAGAAGCCAATCTGCTGTGTGAGACGAAGACCAGTTCAGTCACTCTaGGCACCACTGTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: WMLLIIRSKKPICCVRRRPVQSL*APLSSE
Trigger: TTCAGATGACAGTGGTGCCCAGAGTGACTGAACTGG...TCTTCGTCTCACACAGCAGATTGGCTTCTTAGAGCGAATTATAAGGAGCATCCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477155.6
CDS-3UTR CCA 90 bp TCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SQCHGPPFVQALNYHFCSDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...TGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR CCA 90 bp TCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SSQCHGPPFVQALNYHFCDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...ACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR CCA 90 bp TCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTATAGCTGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SWSTFCPGFKLPLLFSIADFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...AGCTATACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000668663.1
CDS-3UTR CCA 90 bp GAAGTAAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGACTTCGTAGTGGCCTaGACCTTCGGGCGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: EVSYYVALSPSSALVHIEDFVVA*TFGRCL
Trigger: CAGACAACGCCCGAAGGTCCAGGCCACTACGAAGTC...TTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTTACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000658812.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
CDS-3UTR CCA 90 bp CAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGACTTCTGAGAGGCTaGGAATTTCTTGTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: QTQKLHSVRTVVTLKEEEGLLRG*EFLVVS
Trigger: ACTCACCACAAGAAATTCCCAGCCTCTCAGAAGTCC...TTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR CCA 90 bp AGCAGATGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGATGCTCCATACCCTGCTaGGATTCTTTCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SRWIKGQTTDETFVGASGCSIPC*DSFSAT
Trigger: TGTGGCAGAGAAAGAATCCCAGCAGGGTATGGAGCA...TCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCATCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp AAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCAATGGCTTGCATCCTCTaGACAGGCAGCCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: KLLCCFKSKFCPRSYRSSMACIL*TGSLSC
Trigger: ACAGCTCAGGCTGCCTGTCCAGAGGATGCAAGCCAT...TGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666893.1
CDS-3UTR CCA 90 bp TTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCATTTTCAGCTGAGTTGAGCCACCAAGGCTTATaGCTTGCATCCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: FKSKFCPRSYRSSFSAELSHQGL*LASSGQ
Trigger: CTGTCCAGAGGATGCAAGCCATAAGCCTTGGTGGCT...CAACTCAGCTGAAAATGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666893.1
CDS-3UTR CCA 90 bp ATTTCAGCAAGAGATTTGGAGAGGAGAATCATCCAAACTATATCAGAAGTGAAGTGGCAGGGTTCTGCCTaGGCACCCAGGCTATCTCTC +
Preference number: 4 (lower is better)
Translates to: ISARDLERRIIQTISEVKWQGSA*APRLSL
Trigger: GAGAGATAGCCTGGGTGCCCAGGCAGAACCCTGCCA...CTTCACTTCTGATATAGTTTGGATGATTCTCCTCTCCAAATCTCTTGCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp GTGCCACACACTTTTAAACATCTAGATCTCGCAATAATTCATTATCGTGAGGACGTAGCTCTTCTCCTGTaGCTTTGCAGGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VPHTFKHLDLAIIHYREDVALLL*LCRQQP
Trigger: GGGCTGCTGCCTGCAAAGCCACAGGAGAAGAGCTAC...GTCCTCACGATAATGAATTATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp GTGCCACACACTTTTAAACATCTAGATCTCGCAATAATTCATTATCGTGAGGACAGGCTCCCAAGGCCTTaGGTAGCTCTTCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VPHTFKHLDLAIIHYREDRLPRP*VALLLW
Trigger: CCACAGGAGAAGAGCTACCCAAGGCCTTGGGAGCCT...GTCCTCACGATAATGAATTATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR CCA 90 bp GATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGGGGGTTTCCCTAAGTTaGCCAAGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: DIHLGSVVTLLNVMVHLLGVSLS*PSWSRT
Trigger: AGTTCGAGACCAGCTTGGCCAACTTAGGGAAACCCC...CAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR CCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGTGGAGTACAGTGGAGTaGTCTCAGCTCACTGAAACT +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRWSTVE*SQLTET
Trigger: AGTTTCAGTGAGCTGAGACCACTCCACTGTACTCCA...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657597.1
3UTR CAA 72 bp AACTGGTTGGTCAGAAGCATAAGCAAAAACCTGGACTaGCAATTGGCATCTCGAATGGGGGCAGTATTGTGG +
Preference number: 4 (lower is better)
Translates to: NWLVRSISKNLD*QLASRMGAVLW
Trigger: CCACAATACTGCCCCCATTCGAGATGCCAATTGCAAGTCCAGGTTTTTGCTTATGCTTCTGACCAACCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR TCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTATGGTCTTTGCTTTCTaGTTCCCCTGGAAGATTGTG +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLMVFAF*FPWKIV
Trigger: CACAATCTTCCAGGGGAATCAGAAAGCAAAGACCAT...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR TCA 90 bp TTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCATCTCGATTCTGTTGTaGGCCCTCCTCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: FSMSWSTFCPGFKLPLLFISILL*ALLLLP
Trigger: GGGCAGAAGGAGGAGGGCTCACAACAGAATCGAGAT...GAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340612.6
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR TCA 90 bp TCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTATAGCTATCTCGATTCTGTTGTaGGCCCTCCTCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SWSTFCPGFKLPLLFSIAISILL*ALLLLP
Trigger: GGGCAGAAGGAGGAGGGCTCACAACAGAATCGAGAT...AGCTATACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340612.6
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR TCA 90 bp TTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCGGCACCACTGTCATCTaGACTATCCCCAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FSMSWSTFCPGFKLPLLFGTTVI*TIPRAL
Trigger: CAGAGCTCTGGGGATAGTTCAGATGACAGTGGTGCC...GAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000340612.6
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR TCA 90 bp GGATGGAAAAACCAGAACAGTAGTTCTTCTCATCTACATTTTCCAGTTCAGTCAGGCACCACTGTCATCTaGACTATCCCCAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GWKNQNSSSSHLHFPVQSGTTVI*TIPRAL
Trigger: CAGAGCTCTGGGGATAGTTCAGATGACAGTGGTGCC...TGACTGAACTGGAAAATGTAGATGAGAAGAACTACTGTTCTGGTTTTTCCATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477155.6
CDS-3UTR TCA 90 bp CTCTTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLGDIHLGSVVTLLNVMVRCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...GACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp GCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTGTATTTTACGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: AGANSGEVVVLPLAGCILRCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...TAAAATACAACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000669138.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TGGATGCTCCTTATAATTCGCTCTAAGAAGCCAATCTGCTGTGTGAGACGAAGACGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: WMLLIIRSKKPICCVRRRRCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...TCTTCGTCTCACACAGCAGATTGGCTTCTTAGAGCGAATTATAAGGAGCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TTTCAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTCGGTGCAAATTCTGGTaGAGTTGTTGTACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: FQLSCIESGAGANSGEVVRCKFW*SCCTSP
Trigger: AGGGGAAGTACAACAACTTCACCAGAATTTGCACCG...AACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
ENST00000670783.1
CDS-3UTR TCA 90 bp GATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGGCTTGTACTCTGCCGTaGGTGAAGAGCACATCTTTG +
Preference number: 4 (lower is better)
Translates to: DIHLGSVVTLLNVMVHLLACTLP*VKSTSL
Trigger: CAAAGATGTGCTCTTCACTCACGGCAGAGTACAAGC...CAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp ATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCTCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: IHLGSVVTLLNVMVHLLSSLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...GGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp TTTCAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTTCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: FQLSCIESGAGANSGEVVSLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...AACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
CDS-3UTR TCA 90 bp TTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACTCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: LGDIHLGSVVTLLNVMVHSLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...GTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp ATATTTCTTTCTGTTTCTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCTCCTTGATTTTCTGCTaGCAGTGCTTGTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: IFLSVSLLEGEKPACLYASLIFC*QCLYSA
Trigger: GGCAGAGTACAAGCACTGTCAGCAGAAAATCAAGGA...GGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAGAAACAGAAAGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
CDS-3UTR TCA 90 bp ATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: IHLGSVVTLLNVMVHLLSPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...GGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp ATATTTCTTTCTGTTTCTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: IFLSVSLLEGEKPACLYAPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...GGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAGAAACAGAAAGAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
CDS-3UTR TCA 90 bp GTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCATTTTCAGCTGCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: VALSPSSALVHIEAHFQLPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...CAGCTGAAAATGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000664418.1
ENST00000665812.1
ENST00000666893.1
ENST00000669138.1
CDS-3UTR TCA 90 bp CTCTTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCCAACTCCAGTTCCTTaGTTTTCTGCTGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: LLGDIHLGSVVTLLNVMVPTPVP*FSADSA
Trigger: AGCACTGTCAGCAGAAAATCAAGGAACTGGAGTTGG...GACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp CTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGTGTGATTTAATGCTCTaGGTGTGTTTAAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: LCWRERSQLASMPPFWNRCDLML*VCLSTS
Trigger: GGAAGTACTTAAACACACTCAGAGCATTAAATCACA...CCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
CDS-3UTR TCA 90 bp CACTTCTCTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGAACTCATCTACGTTCTaGTATAGAAGTTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HFSVASGTDSSSCWSSALNSSTF*YRSFLF
Trigger: GAAGAGGAAACTTCTATATCAGAACGTAGATGAGTT...CAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGAGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp CAGCATCAAGCCATTTATGAGGGACCCACCCCCATGACAAAACCACCTCCTGTTAACTCATCTACGTTCTaGTATAGAAGTTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QHQAIYEGPTPMTKPPPVNSSTF*YRSFLF
Trigger: GAAGAGGAAACTTCTATATCAGAACGTAGATGAGTT...AACAGGAGGTGGTTTTGTCATGGGGGTGGGTCCCTCATAAATGGCTTGATGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATTCTCTCCTCTGCGATTCTGGATTGTTGCTaGGAACAGGTCATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: ASMPPFWNRKLLKILSSAILDCC*EQVISS
Trigger: ACTGGAAATGACCTGTTCTCAGCAACAATCCAGAAT...CGCAGAGGAGAGAATCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp GCCTTCTCTGCAGTGTCAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTCGATACTTGACTTTTTaGAGCTTGACTTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: AFSAVSRPDANCFSLSLSRYLTF*SLTFCW
Trigger: CCAACAAAAAGTCAAGCTTCAAAAAGTCAAGTATCG...AGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
CDS-3UTR TCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGTATCATTTTGGGCAGTaGTCTGGTCCTGTATTGCCT +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRYHFGQ*SGPVLP
Trigger: AGGCAATACAGGACCAGATCACTGCCCAAAATGATA...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp AGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGAAACTCCTTAAGATATCATTTTGGGCAGTaGTCTGGTCCTGTATTGCCT +
Preference number: 4 (lower is better)
Translates to: REASLPLCHHFGTGNSLRYHFGQ*SGPVLP
Trigger: AGGCAATACAGGACCAGATCACTGCCCAAAATGATA...TCTTAAGGAGTTTCCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp GAGCCGGTGCAAATTCTGGTGAAGTTGTTGTACTTCCCCTTGCTGGTTGTATTTAGCCAATCTGCTGTGTaGGACGAAGACTATTTTCCT +
Preference number: 4 (lower is better)
Translates to: EPVQILVKLLYFPLLVVFSQSAV*DEDYFP
Trigger: AGGAAAATAGTCTTCGTCTCACACAGCAGATTGGCT...AAATACAACCAGCAAGGGGAAGTACAACAACTTCACCAGAATTTGCACCGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTATAGCTTGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SWSTFCPGFKLPLLFSIACGLRN*LILMLE
Trigger: CTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACA...AGCTATACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000340612.6
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp TCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSQCHGPPFVQALNYHFCCGLRN*LILMLE
Trigger: CTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACA...ACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp TCTAAGAAGCCAATCTGCTGTGTGAGACGAAGACTATTTTCCTGTAATTGCTTATGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SKKPICCVRRRLFSCNCLCGLRN*LILMLE
Trigger: CTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACA...TAAGCAATTACAGGAAAATAGTCTTCGTCTCACACAGCAGATTGGCTTCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTTGTGGCCTCAGGAACTaGCTCATCCTCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SMSWSTFCPGFKLPLLFSCGLRN*LILMLE
Trigger: CTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACA...ACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000340612.6
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp TTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTAGCCTCAGAATTCTGTaGACACACAAGATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGSVVTLLNVMVHLLSRLSLRIL*THKILR
Trigger: CCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCT...AAGCCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp TTTCCTACCTTAAGTCAGGATTCTGTGGGGTTTAGAGTTGAAGGAGTGGCAAGGAGCCTCAGAATTCTGTaGACACACAAGATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: FPTLSQDSVGFRVEGVARSLRIL*THKILR
Trigger: CCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCT...CCTTGCCACTCCTTCAACTCTAAACCCCACAGAATCCTGACTTAAGGTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
CDS-3UTR TCA 90 bp CATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACCTTTTGTCCAGGAGCCTCAGAATTCTGTaGACACACAAGATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: HLGSVVTLLNVMVHLLSRSLRIL*THKILR
Trigger: CCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCT...CCTGGACAAAAGGTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664192.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
ENST00000671538.1
CDS-3UTR TCA 90 bp CTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGTGAAGACCTCAGTGCTGTACTTGTAGTTCATCAGTaGGCCTTTGAATCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LILMLEFCIVAGEDLSAVLVVHQ*AFESLH
Trigger: ATGAAGAGATTCAAAGGCTCACTGATGAACTACAAG...TACAGCACTGAGGTCTTCACCAGCAACAATGCAGAACTCCAGCATGAGGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TTCTCTGTGGCCTCAGGAACTGACTCATCCTCATGCTGGAGTTCTGCATTGTTGCTTGTAGTTCATCAGTaGGCCTTTGAATCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: FSVASGTDSSSCWSSALLLVVHQ*AFESLH
Trigger: ATGAAGAGATTCAAAGGCTCACTGATGAACTACAAG...CAACAATGCAGAACTCCAGCATGAGGATGAGTCAGTTCCTGAGGCCACAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp CTTTGTTGGAGGGAGAGAAGCCAGCTTGCCTCTATGCCACCATTTTGGAACAGGTTGTCAATTTCTAGTTaGGCCTTCTTAAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LCWRERSQLASMPPFWNRLSISS*AFLSAE
Trigger: TTCTGCACTTAAGAAGGCTCAACTAGAAATTGACAA...CCTGTTCCAAAATGGTGGCATAGAGGCAAGCTGGCTTCTCTCCCTCCAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000660938.1
ENST00000664192.1
ENST00000665812.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TCTCTGCAGTGTCAAGACCAGATGCCAACTGCTTCTCTCTCTCTCTCTCTTTTGTCCTCATCCAGTCTCTaGTTTTGTTCCTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SLQCQDQMPTASLSLSLLSSSSL*FCSFAF
Trigger: GAAAGCAAAGGAACAAAATCAGAGACTGGATGAGGA...CAAAAGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACTGCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477155.6
ENST00000509712.6
ENST00000658812.1
ENST00000664192.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TTCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: FSMSWSTFCPGFKLPLLFFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...GAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp AATCTCTTCTTGCTTGAAATACCTAGAGTAGATTCTACTTTCCTGACTGAACCCTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: NLFLLEIPRVDSTFLTEPFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...GGGTTCAGTCAGGAAAGTAGAATCTACTCTAGGTATTTCAAGCAAGAAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR TCA 90 bp TCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGTATAGCTTTTCCTCCTTGGGGCTaGGGCAGGAACCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: SWSTFCPGFKLPLLFSIAFPPWG*GRNLKN
Trigger: GTTCTTGAGGTTCCTGCCTCAGCCCCAAGGAGGAAA...AGCTATACTGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000477155.6
ENST00000657597.1
ENST00000660083.1
ENST00000660938.1
ENST00000664805.1
ENST00000665812.1
ENST00000667205.1
ENST00000668663.1
CDS-3UTR TCA 90 bp AGTAAGCTATTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCGAACTTTTCCCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SKLLCCFKSKFCPRSYRSELFPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGGAAAAGTTC...GCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAATAGCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477155.6
CDS-3UTR TCA 90 bp CTCATCCTCATGCTGGAGTTCTGCATTGTTGCTGGTGAAGACCTCAGTGCTGTATTGTGCAAATTCTTGTaGAAGCTTCAAGACCTCACT +
Preference number: 4 (lower is better)
Translates to: LILMLEFCIVAGEDLSAVLCKFL*KLQDLT
Trigger: AGTGAGGTCTTGAAGCTTTCACAAGAATTTGCACAA...TACAGCACTGAGGTCTTCACCAGCAACAATGCAGAACTCCAGCATGAGGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477155.6
ENST00000664192.1
ENST00000670783.1
CDS-3UTR TCA 90 bp AAGATCTTCAACTTAATTAGCAGTCAGGGAATACCAGTTAAAGCCACACTTAAAGCCGACCTACCTCGCTaGGGATGTTCTAAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: KIFNLISSQGIPVKATLKADLPR*GCSKPA
Trigger: AGCGGGCTTAGAACATCCTCAGCGAGGTAGGTCGGC...TTTAAGTGTGGCTTTAACTGGTATTCCCTGACTGCTAATTAAGTTGAAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000667947.1
CDS-3UTR TCA 90 bp ACAGATGAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTCACCTCACCTTTAAGTaGGAAAAGGAACGCCGACCT +
Preference number: 4 (lower is better)
Translates to: TDETFVGASGQFLQILHFHLTFK*EKERRP
Trigger: AGGTCGGCGTTCCTTTTCTCACTTAAAGGTGAGGTG...AAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTCATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000658812.1
ENST00000663866.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTCGGAAATGGTCATCTaGAACCACAGCTTACCTAAT +
Preference number: 4 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMSEMVI*NHSLPN
Trigger: ATTAGGTAAGCTGTGGTTTCAGATGACCATTTCCGA...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR TCA 90 bp CAAACGCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAATCTCATGTTCCACCCTaGGATGAGATCAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: QTQKLHSVRTVVTLKEEESHVPP*DEISTV
Trigger: AACTGTACTGATCTCATCTCAGGGTGGAACATGAGA...TTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGCGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR TCA 90 bp GCAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGGATATGCTTGGGCTTTaGCAAAAATTCCTAGCATGG +
Preference number: 4 (lower is better)
Translates to: AETAFSQDSSYSEGGGRMDMLGL*QKFLAW
Trigger: CCATGCTAGGAATTTTTGTCAAAGCCCAAGCATATC...CATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR TCA 90 bp CAGAAACTGCATTCAGTCAGGACAGTAGTTACTCTGAAGGAGGAGGAAGGATGTGACAGTACCAAGTATTaGAAACCAAGGTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: QKLHSVRTVVTLKEEEGCDSTKY*KPRWRN
Trigger: GTTCCTCCACCTTGGTTTTCAATACTTGGTACTGTC...ACATCCTTCCTCCTCCTTCAGAGTAACTACTGTCCTGACTGAATGCAGTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000654683.1
ENST00000655447.1
ENST00000655845.1
ENST00000667947.1
ENST00000670292.1
CDS-3UTR TCA 90 bp GAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACGCTGAGGTGGCTTCTCTGTaGTTTCTGAACTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: ETFVGASGQFLQILHFDAEVASL*FLNFWI
Trigger: AATCCAGAAGTTCAGAAATCACAGAGAAGCCACCTC...AGCGTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000658812.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GAGAAAAGAAGTTTAATTGGCTCATGGTTCTGCCGGCTATACAGAAAGCGTGGTAGGGCAGACAACAGATaGGACATTTGTAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: EKRSLIGSWFCRLYRKRGRADNR*DICRSF
Trigger: GAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCT...ACCACGCTTTCTGTATAGCCGGCAGAACCATGAGCCAATTAAACTTCTTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514642.1
CDS-3UTR TCA 90 bp TTTCAGCTGAGTTGCATAGAATCTGGAGCCGGTGCAAATTCTGGTGAAGTTGTTAGGGCAGACAACAGATaGGACATTTGTAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FQLSCIESGAGANSGEVVRADNR*DICRSF
Trigger: GAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCT...AACAACTTCACCAGAATTTGCACCGGCTCCAGATTCTATGCAACTCAGCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GTAGGTGAAATGGGAGCAGACATGTCACACGGTGATAGTGGGAGCAAGAGAGAGAAACTATATCAGAAGTaGAGTATTCAGAGTGGTACG +
Preference number: 4 (lower is better)
Translates to: VGEMGADMSHGDSGSKREKLYQK*SIQSGT
Trigger: CGTACCACTCTGAATACTTCACTTCTGATATAGTTT...CTCTCTCTTGCTCCCACTATCACCGTGTGACATGTCTGCTCCCATTTCACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp GTGCCACACACTTTTAAACATCTAGATCTCGCAATAATTCATTATCGTGAGGACCTGGTCAGCTTCTGGTaGGGGACTCAGGAAGCTAAC +
Preference number: 4 (lower is better)
Translates to: VPHTFKHLDLAIIHYREDLVSFW*GTQEAN
Trigger: GTTAGCTTCCTGAGTCCCTCACCAGAAGCTGACCAG...GTCCTCACGATAATGAATTATTGCGAGATCTAGATGTTTAAAAGTGTGTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000514642.1
ENST00000655164.1
ENST00000663866.1
ENST00000666893.1
ENST00000671281.1
CDS-3UTR TCA 90 bp AATCTTAAAGCTCCAAAATACTCTCCCTTGACTCCATGTCCCACATCCAGGGCACTTTGCTCCCATATCTaGTCACAGGTTGTTACAAGG +
Preference number: 4 (lower is better)
Translates to: NLKAPKYSPLTPCPTSRALCSHI*SQVVTR
Trigger: CCTTGTAACAACCTGTGATCAGATATGGGAGCAAAG...TGCCCTGGATGTGGGACATGGAGTCAAGGGAGAGTATTTTGGAGCTTTAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp AGGAAGCTCACAATCATGATGGTAGGTGAAGTGGGAGCAGACATGTCATATGGTATCTCTCACATCATCTaGAATCTTTGTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RKLTIMMVGEVGADMSYGISHII*NLCGSC
Trigger: GCAGCTCCCACAAAGATTTCAGATGATGTGAGAGAT...ACCATATGACATGTCTGCTCCCACTTCACCTACCATCATGATTGTGAGCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp GATGAGACATTTGTAGGAGCTTCAGGACAGTTCCTGCAAATTCTCCACTTTGACCTGGTCTCAAACTCCTaGGCTCAAGTTCAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: DETFVGASGQFLQILHFDLVSNS*AQVQGQ
Trigger: TTGACCTTGAACTTGAGCTCAGGAGTTTGAGACCAG...GTCAAAGTGGAGAATTTGCAGGAACTGTCCTGAAGCTCCTACAAATGTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp TTCAAGATGAGATTTGGAGGGGATAAAGAACCAAACCGTATCATTCCACCCATGAGCCTCCTGAATAGCTaGGACTACAGGTGTATGCCA +
Preference number: 4 (lower is better)
Translates to: FKMRFGGDKEPNRIIPPMSLLNS*DYRCMP
Trigger: TGGCATACACCTGTAGTCTCAGCTATTCAGGAGGCT...CATGGGTGGAATGATACGGTTTGGTTCTTTATCCCCTCCAAATCTCATCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514642.1
ENST00000666893.1
CDS-3UTR TCA 90 bp TTATGTTGCTTTAAGTCCAAGTTCTGCCCTCGTTCATATCGAAGCTCATTTTCACCCACCTCAGCCTCCTaGATAGCTGAGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: LCCFKSKFCPRSYRSSFSPTSAS*IAETTG
Trigger: ACCTGTAGTCTCAGCTATTCAGGAGGCTGAGGTGGG...TGAAAATGAGCTTCGATATGAACGAGGGCAGAACTTGGACTTAAAGCAACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666893.1
CDS-3UTR TCA 90 bp TTATGTATCCAGCCTCAGAATTCTGTGAACACACAAGATTCTCAGGAGACTTTTCTAGTTAGGCAGCCATaGCTCTCAGGCATGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LCIQPQNSVNTQDSQETFLVRQP*LSGMAD
Trigger: GTCAGCCATGCCTGAGAGTCATGGCTGCCTAACTAG...AAAAGTCTCCTGAGAATCTTGTGTGTTCACAGAATTCTGAGGCTGGATACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000660938.1
ENST00000664192.1
ENST00000670783.1
CDS-3UTR TCA 90 bp TCTCAATGTCATGGTCCACCTTTTGTCCAGGCTTTAAATTACCACTTTTGTTCAGGCAGGAGAATTGGTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SQCHGPPFVQALNYHFCSGRRIG*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAACCAATTCTCCTGCC...TGAACAAAAGTGGTAATTTAAAGCCTGGACAAAAGGTGGACCATGACATTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657597.1
CDS-3UTR GCA 90 bp TTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCACAGACCAGATGCCAACTaGTTCTCTCTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LGDIHLGSVVTLLNVMVHRPDAN*FSLSLS
Trigger: AGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCT...GTGGACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR GCA 90 bp CTCTTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCAGACCAGATGCCAACTaGTTCTCTCTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLGDIHLGSVVTLLNVMVRPDAN*FSLSLS
Trigger: AGAGAGAGAGAGAGAGAAGCAGTTGGCATCTGGTCT...GACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR GCA 90 bp CTCTTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCAGTGTCAAGACCAGATaGCAACTGCTTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LLGDIHLGSVVTLLNVMVSVKTR*QLLLSL
Trigger: GAGAGAGAGAAGCAGTTGGCATCTGGTCTTGACACT...GACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342022.8
ENST00000428554.6
ENST00000477155.6
ENST00000657597.1
ENST00000671538.1
CDS-3UTR GCA 90 bp AGCAGATGGATAAAAGGGCAGACAACAGATGAGACATTTGTAGGAGCTTCAGGATTTCAAGGCCTTCTCTaGAGTGTCAAGACCAGATGC +
Preference number: 4 (lower is better)
Translates to: SRWIKGQTTDETFVGASGFQGLL*SVKTRC
Trigger: GCATCTGGTCTTGACACTGCAGAGAAGGCCTTGAAA...TCCTGAAGCTCCTACAAATGTCTCATCTGTTGTCTGCCCTTTTATCCATCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000658812.1
ENST00000666893.1
CDS-3UTR GCA 90 bp CTCTTGGGTGATATCCATTTGGGATCTGTGGTAACTCTTCTCAATGTCATGGTCCCTCTCTTGGAAAACTaGCCTCCTTTACTGACTCCT +
Preference number: 4 (lower is better)
Translates to: LLGDIHLGSVVTLLNVMVPLLEN*PPLLTP
Trigger: AGGAGTCAGTAAAGGAGGGCAGTTTTCCAAGAGAGG...GACCATGACATTGAGAAGAGTTACCACAGATCCCAAATGGATATCACCCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the