Pregenerated sensors for CCDC28A (Homo sapiens)
Ensembl gene IDs: ENSG00000024862Ensembl transcript IDs: ENST00000617445.5
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTaGAATAAGTTTGGTGAGCTCAGGAAAGAGAAATCCCTCCGCCCT | + |
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Preference number: 1 (lower is better) Translates to: GLPQDACASTACDQH*NKFGELRKEKSLRP Trigger: AGGGCGGAGGGATTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR GCA 90 bp | AAACTGAAGCTGGGCTTGCCACAAGACGCCTGTGCATCAACAGCTTaGGATCAACACTGGAATAAGTTTGGTGAGCTCAGGAAAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: KLKLGLPQDACASTA*DQHWNKFGELRKEK Trigger: TTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCCAGCTTCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR CAA 90 bp | AAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGAATAAGTTaGGTGAGCTCAGGAAAGAGAAATCCCTCCGCCCTGTCAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: KTPVHQQLAINTGIS*VSSGKRNPSALSRT Trigger: TGTTCTTGACAGGGCGGAGGGATTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGAATAAGCCTTGTTGTGGAAGATaGTTCTGCTACTGGATTTGG | + |
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Preference number: 2 (lower is better) Translates to: GLPQDACASTACDQHWNKPCCGR*FCYWIW Trigger: CCAAATCCAGTAGCAGAATCATCTTCCACAACAAGG...CTTATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR-3UTR CCA 90 bp | TCAACAGCTTGCGATCAACACTGGAATAAGTTTGGTGAGCTCAGGAAAGAGAAAGCTACTGGATTTGGCTaGAAAAGTAAAGACTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: STACDQHWNKFGELRKEKATGFG*KSKDCC Trigger: GCAGCAGTCTTTACTTTTCCAGCCAAATCCAGTAGC...TTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR CAA 90 bp | AATTACTTTAATTCCTTGTTGTGGAAGATGATTCTGCTACTGGATTaGGCTGGAAAAGTAAAGACTGCTGCTTCTCTTCAAATCACAAGA | + |
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Preference number: 2 (lower is better) Translates to: NYFNSLLWKMILLLD*AGKVKTAASLQITR Trigger: TCTTGTGATTTGAAGAGAAGCAGCAGTCTTTACTTTTCCAGCCAAATCCAGTAGCAGAATCATCTTCCACAACAAGGAATTAAAGTAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR-3UTR GCA 90 bp | TTATTTAATTTCTTATCACTGGCCATTGGAAAACACACCAGCATGTGTACTGATAAAAGTAAAGACTGCTaGTTCTCTTCAAATCACAAG | + |
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Preference number: 2 (lower is better) Translates to: LFNFLSLAIGKHTSMCTDKSKDC*FSSNHK Trigger: CTTGTGATTTGAAGAGAAGCAGCAGTCTTTACTTTT...ATCAGTACACATGCTGGTGTGTTTTCCAATGGCCAGTGATAAGAAATTAAATAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR GCA 72 bp | CTGGGCTTGCCACAAGACGCCTGTGCATCAACAGCTTaGGATCAACACTGGAATAAGTTTGGTGAGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: LGLPQDACASTA*DQHWNKFGELR Trigger: CCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR CCA 72 bp | CAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTaGAATAAGTTTGGTGAGCTCAGGAAAGAGAAATCC | + |
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Preference number: 3 (lower is better) Translates to: QDACASTACDQH*NKFGELRKEKS Trigger: GGATTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR GCA 72 bp | ATAAGGCAACAATATGAAGCACAGCAGCACAATCTCTaGGTCACATTTCCTGATGAAGCCTTCAACAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: IRQQYEAQQHNL*VTFPDEAFNKA Trigger: GGCCTTGTTGAAGGCTTCATCAGGAAATGTGACGCAGAGATTGTGCTGCTGTGCTTCATATTGTTGCCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR-3UTR CAA 90 bp | ATGAAGCCTTCAACAAGGCCTAGGCCTCCAGTTATGGTGAATTACAGCGAGTCAATTCTGCTACTGGATTaGGCTGGAAAAGTAAAGACT | + |
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Preference number: 3 (lower is better) Translates to: MKPSTRPRPPVMVNYSESILLLD*AGKVKT Trigger: AGTCTTTACTTTTCCAGCCAAATCCAGTAGCAGAAT...TGACTCGCTGTAATTCACCATAACTGGAGGCCTAGGCCTTGTTGAAGGCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR CCA 72 bp | CTTGTTGTGGAAGATGATTCTGCTACTGGATTTGGCTaGAAAAGTAAAGACTGCTGCTTCTCTTCAAATCAC | + |
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Preference number: 3 (lower is better) Translates to: LVVEDDSATGFG*KSKDCCFSSNH Trigger: GTGATTTGAAGAGAAGCAGCAGTCTTTACTTTTCCAGCCAAATCCAGTAGCAGAATCATCTTCCACAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | CACTGGAATAAGTTTGGTGAGCTCAGGAAAGAGAAATCCCTCCGCCCTGTCAAGTGGATCGGAGTTGACTaGGCGCCTTTGCCCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HWNKFGELRKEKSLRPVKWIGVD*APLPSP Trigger: TGGAGAGGGCAAAGGCGCTCAGTCAACTCCGATCCA...CTTGACAGGGCGGAGGGATTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGAATATTGACTGAGCGCCTTTaGCCTCTCCACCCTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: WACHKTPVHQQLAINTGILTERL*PLHPEV Trigger: AACCTCAGGGTGGAGAGGGCAAAGGCGCTCAGTCAA...TATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR GCA 90 bp | CACTGGAATAAGTTTGGTGAGCTCAGGAAAGAGAAATCCCTCCGCCCTGTCAAGGCCACAAGACGCCTGTaGATCAACAGCTTGCGATCA | + |
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Preference number: 4 (lower is better) Translates to: HWNKFGELRKEKSLRPVKATRRL*INSLRS Trigger: TGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGC...CTTGACAGGGCGGAGGGATTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CCA 90 bp | AAGCTGGGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGCTCCACCCTGAGGTTTaGTCTTTTCTTTCATCACTC | + |
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Preference number: 4 (lower is better) Translates to: KLGLPQDACASTACDQHWLHPEV*SFLSSL Trigger: GAGTGATGAAAGAAAAGACCAAACCTCAGGGTGGAG...CCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | TCAACAGCTTGCGATCAACACTGGAATAAGTTTGGTGAGCTCAGGAAAGAGAAAGTGCTGGATCGGAGTTaGCTGAGCGCCTTTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: STACDQHWNKFGELRKEKVLDRS*LSAFAL Trigger: GAGGGCAAAGGCGCTCAGTCAACTCCGATCCAGCAC...TTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR CAA 72 bp | GTGCATCAACAGCTTGCGATCAACACTGGAATAAGTTaGGTGAGCTCAGGAAAGAGAAATCCCTCCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VHQQLAINTGIS*VSSGKRNPSAL Trigger: CAGGGCGGAGGGATTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGATGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | CACTGGAATAAGTTTGGTGAGCTCAGGAAAGAGAAATCCCTCCGCCCTGTCAAGCAGCTTCTTAAGACCTaGAGAAGAAGGGTATTGGGG | + |
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Preference number: 4 (lower is better) Translates to: HWNKFGELRKEKSLRPVKQLLKT*RRRVLG Trigger: CCCCAATACCCTTCTTCTTCAGGTCTTAAGAAGCTG...CTTGACAGGGCGGAGGGATTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGAATACAGCAGCACAATCTCTaGGTCACATTTCCTGATGAA | + |
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Preference number: 4 (lower is better) Translates to: WACHKTPVHQQLAINTGIQQHNL*VTFPDE Trigger: TTCATCAGGAAATGTGACGCAGAGATTGTGCTGCTG...TATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CCA 90 bp | TGGGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGAATAGAAGCCTATCCAGATTaGAGTCACTGGCTGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: WACHKTPVHQQLAINTGIEAYPD*SHWLFF Trigger: GAAAAACAGCCAGTGACTCCAATCTGGATAGGCTTC...TATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CCA 90 bp | TGGGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGAATAGCTACTGGATTTGGCTaGAAAAGTAAAGACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WACHKTPVHQQLAINTGIATGFG*KSKDCC Trigger: GCAGCAGTCTTTACTTTTCCAGCCAAATCCAGTAGC...TATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CCA 90 bp | GGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGAATAAGCTTATCACTGGCCATTaGAAAACACACCAGCATGTG | + |
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Preference number: 4 (lower is better) Translates to: GLPQDACASTACDQHWNKLITGH*KTHQHV Trigger: CACATGCTGGTGTGTTTTCCAATGGCCAGTGATAAG...CTTATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | GGAAAGAGAAATCCCTCCGCCCTGTCAAGAACATCAGCACAATGCATTTCAAGTCCTCTCTCCATCTCCTaGACATCTGAGACATCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GKRNPSALSRTSAQCISSPLSIS*TSETSV Trigger: CACTGATGTCTCAGATGTTCAGGAGATGGAGAGAGG...ACTTGAAATGCATTGTGCTGATGTTCTTGACAGGGCGGAGGGATTTCTCTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CCA 90 bp | GGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGAATAAGGCTAGCAGAAGTATTTaGAACATCTTGTGCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: GLPQDACASTACDQHWNKASRSI*NILCIC Trigger: GCAGATGCACAAGATGTTCCAAATACTTCTGCTAGC...CTTATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR GCA 90 bp | ATAAGTTTGGTGAGCTCAGGAAAGAGAAATCCCTCCGCCCTGTCAAGAACATCACGAGCTAATTTCTCCTaGATTCCCCGAACATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: ISLVSSGKRNPSALSRTSRANFS*IPRTCS Trigger: GGAACATGTTCGGGGAATGCAGGAGAAATTAGCTCG...TGATGTTCTTGACAGGGCGGAGGGATTTCTCTTTCCTGAGCTCACCAAACTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | GAAAGAGAAATCCCTCCGCCCTGTCAAGAACATCAGCACAATGCATTTCAAGTACATCTCCTGAACATCTaGGACATCAGTGAGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: EREIPPPCQEHQHNAFQVHLLNI*DISEEG Trigger: TCCTTCCTCACTGATGTCTCAGATGTTCAGGAGATG...TACTTGAAATGCATTGTGCTGATGTTCTTGACAGGGCGGAGGGATTTCTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | GAAAGAGAAATCCCTCCGCCCTGTCAAGAACATCAGCACAATGCATTTCAAGTAGGCCTCCAGTTATGGTaGATTACAGCGAGTCACATT | + |
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Preference number: 4 (lower is better) Translates to: EREIPPPCQEHQHNAFQVGLQLW*ITASHI Trigger: AATGTGACTCGCTGTAATTCACCATAACTGGAGGCC...TACTTGAAATGCATTGTGCTGATGTTCTTGACAGGGCGGAGGGATTTCTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGAATAATTTGGAACATCTTGTaGATCTGCCAAATGGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: WACHKTPVHQQLAINTGIIWNIL*ICQMEF Trigger: AAACTCCATTTGGCAGATGCACAAGATGTTCCAAAT...TATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | GAAAGAGAAATCCCTCCGCCCTGTCAAGAACATCAGCACAATGCATTTCAAGTAAATCATTCAAAAGACTaGGCAGCCCTCTCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: EREIPPPCQEHQHNAFQVNHSKD*AALSPS Trigger: AGATGGAGAGAGGGCTGCTCAGTCTTTTGAATGATT...TACTTGAAATGCATTGTGCTGATGTTCTTGACAGGGCGGAGGGATTTCTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | AACAATATGAAGCACAGCAGCACAATCTCTGCGTCACATTTCCTGATGAAGCCTCCTTGTTGTGGAAGATaGTTCTGCTACTGGATTTGG | + |
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Preference number: 4 (lower is better) Translates to: NNMKHSSTISASHFLMKPPCCGR*FCYWIW Trigger: CCAAATCCAGTAGCAGAATCATCTTCCACAACAAGG...AGGCTTCATCAGGAAATGTGACGCAGAGATTGTGCTGCTGTGCTTCATATTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | CATCAACAGCTTGCGATCAACACTGGAATAAGTTTGGTGAGCTCAGGAAAGAGATTGTCTAACATAAACTaGAGCTGGGCTTGCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: HQQLAINTGISLVSSGKRLSNIN*SWACHK Trigger: CTTGTGGCAAGCCCAGCTTCAGTTTATGTTAGACAA...TCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CCA 90 bp | TTATTTAATTTCTTATCACTGGCCATTGGAAAACACACCAGCATGTGTACTGATGAAGAAGAAGGGTATTaGGGCCCCCTTCCGCAACCC | + |
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Preference number: 4 (lower is better) Translates to: LFNFLSLAIGKHTSMCTDEEEGY*GPLPQP Trigger: GGGTTGCGGAAGGGGGCCCCAATACCCTTCTTCTTC...ATCAGTACACATGCTGGTGTGTTTTCCAATGGCCAGTGATAAGAAATTAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR GCA 90 bp | CACAGCAGCACAATCTCTGCGTCACATTTCCTGATGAAGCCTTCAACAAGGCCTAAAAGTAAAGACTGCTaGTTCTCTTCAAATCACAAG | + |
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Preference number: 4 (lower is better) Translates to: HSSTISASHFLMKPSTRPKSKDC*FSSNHK Trigger: CTTGTGATTTGAAGAGAAGCAGCAGTCTTTACTTTT...AGGCCTTGTTGAAGGCTTCATCAGGAAATGTGACGCAGAGATTGTGCTGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CCA 90 bp | AATCCCATAAGGCAACAATATGAAGCACAGCAGCACAATCTCTGCGTCACATTTGCTTGCGATCAACACTaGAATAAGTTTGGTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: NPIRQQYEAQQHNLCVTFACDQH*NKFGEL Trigger: GAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGC...AAATGTGACGCAGAGATTGTGCTGCTGTGCTTCATATTGTTGCCTTATGGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | AGGCAACAATATGAAGCACAGCAGCACAATCTCTGCGTCACATTTCCTGATGAATCATTTCCAAATGCTTaGAGTTTTCCAGAGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RQQYEAQQHNLCVTFPDESFPNA*SFPEWK Trigger: TTTCCACTCTGGAAAACTTCAAGCATTTGGAAATGA...TTCATCAGGAAATGTGACGCAGAGATTGTGCTGCTGTGCTTCATATTGTTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CCA 90 bp | AATCCCATAAGGCAACAATATGAAGCACAGCAGCACAATCTCTGCGTCACATTTTGTGCATCTGCCAAATaGAGTTTTTGTATGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: NPIRQQYEAQQHNLCVTFCASAK*SFCMEE Trigger: TTCTTCCATACAAAAACTCCATTTGGCAGATGCACA...AAATGTGACGCAGAGATTGTGCTGCTGTGCTTCATATTGTTGCCTTATGGGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| 3UTR CAA 72 bp | AATTCCTTGTTGTGGAAGATGATTCTGCTACTGGATTaGGCTGGAAAAGTAAAGACTGCTGCTTCTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: NSLLWKMILLLD*AGKVKTAASLQ Trigger: TTGAAGAGAAGCAGCAGTCTTTACTTTTCCAGCCAAATCCAGTAGCAGAATCATCTTCCACAACAAGGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR GCA 90 bp | TCAACAGCTTGCGATCAACACTGGAATAAGTTTGGTGAGCTCAGGAAAGAGAAAAACATCTTGTGCATCTaGCAAATGGAGTTTTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: STACDQHWNKFGELRKEKNILCI*QMEFLY Trigger: ATACAAAAACTCCATTTGGCAGATGCACAAGATGTT...TTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CCA 90 bp | AATCCCATAAGGCAACAATATGAAGCACAGCAGCACAATCTCTGCGTCACATTTTTAATTTCTTATCACTaGCCATTGGAAAACACACCA | + |
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Preference number: 4 (lower is better) Translates to: NPIRQQYEAQQHNLCVTFLISYH*PLENTP Trigger: TGGTGTGTTTTCCAATGGCCAGTGATAAGAAATTAA...AAATGTGACGCAGAGATTGTGCTGCTGTGCTTCATATTGTTGCCTTATGGGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR TCA 90 bp | TTATTTAATTTCTTATCACTGGCCATTGGAAAACACACCAGCATGTGTACTGATCATAAGGCAACAATATaGAGCACAGCAGCACAATCT | + |
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Preference number: 4 (lower is better) Translates to: LFNFLSLAIGKHTSMCTDHKATI*STAAQS Trigger: AGATTGTGCTGCTGTGCTTCATATTGTTGCCTTATG...ATCAGTACACATGCTGGTGTGTTTTCCAATGGCCAGTGATAAGAAATTAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR GCA 90 bp | TTATTTAATTTCTTATCACTGGCCATTGGAAAACACACCAGCATGTGTACTGATTGTGCATCAACAGCTTaGGATCAACACTGGAATAAG | + |
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Preference number: 4 (lower is better) Translates to: LFNFLSLAIGKHTSMCTDCASTA*DQHWNK Trigger: CTTATTCCAGTGTTGATCGCAAGCTGTTGATGCACA...ATCAGTACACATGCTGGTGTGTTTTCCAATGGCCAGTGATAAGAAATTAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | AAGCTGGGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGTTGGTCGCTGTGAAGTaGACTGTGATGCAGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: KLGLPQDACASTACDQHWLVAVK*TVMQDL Trigger: CAAATCCTGCATCACAGTCAACTTCACAGCGACCAA...CCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | AACAATATGAAGCACAGCAGCACAATCTCTGCGTCACATTTCCTGATGAAGCCTAGTGCTGGATCGGAGTaGACTGAGCGCCTTTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: NNMKHSSTISASHFLMKPSAGSE*TERLCP Trigger: AGGGCAAAGGCGCTCAGTCAACTCCGATCCAGCACT...AGGCTTCATCAGGAAATGTGACGCAGAGATTGTGCTGCTGTGCTTCATATTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | GGAAAGAGAAATCCCTCCGCCCTGTCAAGAACATCAGCACAATGCATTTCAAGTAAACTGAAGCTGGGCTaGCCACAAGACGCCTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: GKRNPSALSRTSAQCISSKLKLG*PQDACA Trigger: TGCACAGGCGTCTTGTGGCAAGCCCAGCTTCAGTTT...ACTTGAAATGCATTGTGCTGATGTTCTTGACAGGGCGGAGGGATTTCTCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | TGGGCTTGCCACAAGACGCCTGTGCATCAACAGCTTGCGATCAACACTGGAATAAACACTGGAATAAGTTaGGTGAGCTCAGGAAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: WACHKTPVHQQLAINTGINTGIS*VSSGKR Trigger: TCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTT...TATTCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | CACTGGAATAAGTTTGGTGAGCTCAGGAAAGAGAAATCCCTCCGCCCTGTCAAGACTGTGATGCAGGATTaGAAAACCCTGTGCTTTTAC | + |
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Preference number: 5 (lower is better) Translates to: HWNKFGELRKEKSLRPVKTVMQD*KTLCFY Trigger: GTAAAAGCACAGGGTTTTCAAATCCTGCATCACAGT...CTTGACAGGGCGGAGGGATTTCTCTTTCCTGAGCTCACCAAACTTATTCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | CACAGCAGCACAATCTCTGCGTCACATTTCCTGATGAAGCCTTCAACAAGGCCTATTCTGCTACTGGATTaGGCTGGAAAAGTAAAGACT | + |
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Preference number: 5 (lower is better) Translates to: HSSTISASHFLMKPSTRPILLLD*AGKVKT Trigger: AGTCTTTACTTTTCCAGCCAAATCCAGTAGCAGAAT...AGGCCTTGTTGAAGGCTTCATCAGGAAATGTGACGCAGAGATTGTGCTGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | CATCAACAGCTTGCGATCAACACTGGAATAAGTTTGGTGAGCTCAGGAAAGAGAGTTTTAAGTTCCTTATaGCACCACGGCCAGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: HQQLAINTGISLVSSGKRVLSSL*HHGQLL Trigger: AAGAAGCTGGCCGTGGTGCAATAAGGAACTTAAAAC...TCTCTTTCCTGAGCTCACCAAACTTATTCCAGTGTTGATCGCAAGCTGTTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | GAAAGAGAAATCCCTCCGCCCTGTCAAGAACATCAGCACAATGCATTTCAAGTATCTTATCACTGGCCATaGGAAAACACACCAGCATGT | + |
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Preference number: 5 (lower is better) Translates to: EREIPPPCQEHQHNAFQVSYHWP*ENTPAC Trigger: ACATGCTGGTGTGTTTTCCAATGGCCAGTGATAAGA...TACTTGAAATGCATTGTGCTGATGTTCTTGACAGGGCGGAGGGATTTCTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS CCA 90 bp | TCAATTCTTCTAAATCTGACAGAAGCCTATCCAGATTGGAGTCACTaGCTGTTTTTCTCTTATCCTCAGGAAGTTCCTCTAACTCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: SILLNLTEAYPDWSH*LFFSYPQEVPLTPH Trigger: ATGGGGAGTTAGAGGAACTTCCTGAGGATAAGAGAAAAACAGCCAGTGACTCCAATCTGGATAGGCTTCTGTCAGATTTAGAAGAATTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | GAAAGAGAAATCCCTCCGCCCTGTCAAGAACATCAGCACAATGCATTTCAAGTATCACTCTTTTTAACTTaGGTCGCTGTGAAGTTGACT | + |
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Preference number: 5 (lower is better) Translates to: EREIPPPCQEHQHNAFQVSLFLT*VAVKLT Trigger: AGTCAACTTCACAGCGACCAAAGTTAAAAAGAGTGA...TACTTGAAATGCATTGTGCTGATGTTCTTGACAGGGCGGAGGGATTTCTCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS CCA 90 bp | TGGAAGAATTCAATTCTTCTAAATCTGACAGAAGCCTATCCAGATTaGAGTCACTGGCTGTTTTTCTCTTATCCTCAGGAAGTTCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: WKNSILLNLTEAYPD*SHWLFFSYPQEVPL Trigger: TAGAGGAACTTCCTGAGGATAAGAGAAAAACAGCCAGTGACTCCAATCTGGATAGGCTTCTGTCAGATTTAGAAGAATTGAATTCTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | TTATTTAATTTCTTATCACTGGCCATTGGAAAACACACCAGCATGTGTACTGATAGTATTTGGAACATCTaGTGCATCTGCCAAATGGAG | + |
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Preference number: 5 (lower is better) Translates to: LFNFLSLAIGKHTSMCTDSIWNI*CICQME Trigger: CTCCATTTGGCAGATGCACAAGATGTTCCAAATACT...ATCAGTACACATGCTGGTGTGTTTTCCAATGGCCAGTGATAAGAAATTAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS-3UTR CAA 90 bp | TACTTTAATTCCTTGTTGTGGAAGATGATTCTGCTACTGGATTTGGCTGGAAAATTCATTTCCAAATGCTaGAAGTTTTCCAGAGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: YFNSLLWKMILLLDLAGKFISKC*KFSRVE Trigger: TTCCACTCTGGAAAACTTCAAGCATTTGGAAATGAA...TTTTCCAGCCAAATCCAGTAGCAGAATCATCTTCCACAACAAGGAATTAAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS CAA 72 bp | ACTTTGGTCGCTGTGAAGTTGACTGTGATGCAGGATTaGAAAACCCTGTGCTTTTACTCACTGGAATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: TLVAVKLTVMQD*KTLCFYSLEWH Trigger: ATGCCATTCCAGTGAGTAAAAGCACAGGGTTTTCAAATCCTGCATCACAGTCAACTTCACAGCGACCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS CAA 90 bp | ATGGAAGAATTCAATTCTTCTAAATCTGACAGAAGCCTATCCAGATaGGAGTCACTGGCTGTTTTTCTCTTATCCTCAGGAAGTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: MEEFNSSKSDRSLSR*ESLAVFLLSSGSSS Trigger: AGAGGAACTTCCTGAGGATAAGAGAAAAACAGCCAGTGACTCCAATCTGGATAGGCTTCTGTCAGATTTAGAAGAATTGAATTCTTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS CCA 72 bp | TCAATTCTTCTAAATCTGACAGAAGCCTATCCAGATTaGAGTCACTGGCTGTTTTTCTCTTATCCTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SILLNLTEAYPD*SHWLFFSYPQE Trigger: TTCCTGAGGATAAGAGAAAAACAGCCAGTGACTCCAATCTGGATAGGCTTCTGTCAGATTTAGAAGAATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS CAA 72 bp | TTCAATTCTTCTAAATCTGACAGAAGCCTATCCAGATaGGAGTCACTGGCTGTTTTTCTCTTATCCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: FNSSKSDRSLSR*ESLAVFLLSSG Trigger: TCCTGAGGATAAGAGAAAAACAGCCAGTGACTCCAATCTGGATAGGCTTCTGTCAGATTTAGAAGAATTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS GCA 72 bp | TTCATTTTAGCTAGCAGAAGTATTTGGAACATCTTGTaGATCTGCCAAATGGAGTTTTTGTATGGAAGAATT | + |
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Preference number: 6 (lower is better) Translates to: FILASRSIWNIL*ICQMEFLYGRI Trigger: AATTCTTCCATACAAAAACTCCATTTGGCAGATGCACAAGATGTTCCAAATACTTCTGCTAGCTAAAATGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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| CDS CCA 72 bp | GCAGAAGTATTTGGAACATCTTGTGCATCTGCCAAATaGAGTTTTTGTATGGAAGAATTCAATTCTTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: AEVFGTSCASAK*SFCMEEFNSSK Trigger: TTTAGAAGAATTGAATTCTTCCATACAAAAACTCCATTTGGCAGATGCACAAGATGTTCCAAATACTTCTGC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617445.5 |
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