RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC22 (Homo sapiens)

Ensembl gene IDs: ENSG00000101997

Ensembl transcript IDs: ENST00000376227.4, ENST00000490300.1, ENST00000496651.5

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp ATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCAGTGGGCAGGGGTCTaGGTCCAAGGCCGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: IQGPQPTVPSPINCSRAPQWAGV*VQGRSR
Trigger: CCTGCTGCGGCCTTGGACCCAGACCCCTGCCCACTG...GGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376227.4
3UTR-3UTR TCA 90 bp CCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCCCCAAATCCCTGCCTaGGGCTGGGGAGAGACCTCT +
Preference number: 2 (lower is better)
Translates to: PSSPHAGLSPHIRVAVSGPQIPA*GWGETS
Trigger: AGAGGTCTCTCCCCAGCCTCAGGCAGGGATTTGGGG...CCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376227.4
3UTR-3UTR CCA 90 bp CCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGGCTAGGGCATGTGCTTaGCCACTGCCTCCAGCACCC +
Preference number: 2 (lower is better)
Translates to: PSSPHAGLSPHIRVAVSGARACA*PLPPAP
Trigger: GGGTGCTGGAGGCAGTGGCCAAGCACATGCCCTAGC...CCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
3UTR-3UTR CCA 90 bp ATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCAAGGGTTGCGGTCAGTaGGCAGGGGTCTGGGTCCAA +
Preference number: 2 (lower is better)
Translates to: IQGPQPTVPSPINCSRAPKGCGQ*AGVWVQ
Trigger: TTGGACCCAGACCCCTGCCCACTGACCGCAACCCTT...GGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
3UTR-3UTR GCA 90 bp TTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCATGTGCTTGGCCACTaGCTCCAGCACCCCAAATCC +
Preference number: 2 (lower is better)
Translates to: LFGIQGPQPTVPSPINCSHVLGH*LQHPKS
Trigger: GGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACATG...GCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
3UTR-3UTR CCA 90 bp TTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCGCAGCAGGAGGAACTaGACAGCGGAGGAAGTAGCT +
Preference number: 2 (lower is better)
Translates to: FIWDPRPPTHSTVPNKLQRSRRN*TAEEVA
Trigger: AGCTACTTCCTCCGCTGTCCAGTTCCTCCTGCTGCG...CTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
3UTR GCA 72 bp ATGTGCTTGGCCACTGCCTCCAGCACCCCAAATCCCTaGCTGAGGCTGGGGAGAGACCTCTGCCGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: MCLATASSTPNP*LRLGRDLCRRL
Trigger: GAGCCGCCGGCAGAGGTCTCTCCCCAGCCTCAGGCAGGGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CATGTGCTTGGCCACTGCCTCCAGCACCCCAAATCCCTGCCTGAGGCTGGGGAGCCAGTCCTCATCCCCTaGCCGGTCCCGGCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: HVLGHCLQHPKSLPEAGEPVLIP*PVPARL
Trigger: CAGACGGGCCGGGACCGGCCAGGGGATGAGGACTGG...CTCCCCAGCCTCAGGCAGGGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CATGTGCTTGGCCACTGCCTCCAGCACCCCAAATCCCTGCCTGAGGCTGGGGAGCCGCCTCCTCCATGGTaGAGCCGTGTCGGAGTCGGG +
Preference number: 4 (lower is better)
Translates to: HVLGHCLQHPKSLPEAGEPPPPW*SRVGVG
Trigger: CCCGACTCCGACACGGCTCCACCATGGAGGAGGCGG...CTCCCCAGCCTCAGGCAGGGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CATGTGCTTGGCCACTGCCTCCAGCACCCCAAATCCCTGCCTGAGGCTGGGGAGCAGGCCGCCGGGAGGTaGCTGGCACATCTGACACCT +
Preference number: 4 (lower is better)
Translates to: HVLGHCLQHPKSLPEAGEQAAGR*LAHLTP
Trigger: AGGTGTCAGATGTGCCAGCCACCTCCCGGCGGCCTG...CTCCCCAGCCTCAGGCAGGGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACCCTGAGCTGCCCACGTaGCCTGTTCAGGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: QPTVPSPINCSRAPHMLDPELPT*PVQAAG
Trigger: CCCGGCGGCCTGAACAGGTCACGTGGGCAGCTCAGG...GTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCGGTCCCGGCCCGTCTaGTGGCAGAGCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSSPHAGLSPHIRVAVSGRSRPV*WQSCRA
Trigger: TGCCCTGCAGCTCTGCCAGCAGACGGGCCGGGACCG...CCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CATGTGCTTGGCCACTGCCTCCAGCACCCCAAATCCCTGCCTGAGGCTGGGGAGAGCAGGGGACTCGCCTaGAACTCCCGTGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: HVLGHCLQHPKSLPEAGESRGLA*NSRGSP
Trigger: AGGTGAGCCACGGGAGTTCCAGGCGAGTCCCCTGCT...CTCCCCAGCCTCAGGCAGGGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGGGTCCCGGGCTTGTATaGGGGCCCCAAGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGGPGLV*GPQAGP
Trigger: GGGGCCTGCTTGGGGCCCCCATACAAGCCCGGGACC...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp ATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCTGGAGGGCCGAGCCCTaGAGGTGCTGCAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: IQGPQPTVPSPINCSRAPWRAEP*RCCSLG
Trigger: TCCCAAGCTGCAGCACCTCCAGGGCTCGGCCCTCCA...GGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp AGGAGGAACTGGACAGCGGAGGAAGTAGCTAGGGCATGTGCTTGGCCACTGCCTGCCCGTGTGTCCTCCTaGGGTGGGAGGCGGGATGTC +
Preference number: 4 (lower is better)
Translates to: RRNWTAEEVARACAWPLPARVSS*GGRRDV
Trigger: GACATCCCGCCTCCCACCCCAGGAGGACACACGGGC...AGGCAGTGGCCAAGCACATGCCCTAGCTACTTCCTCCGCTGTCCAGTTCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGAGCCCACCGCAGGGTTaGTCACACGCAGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGSPPQG*SHAGSG
Trigger: TCCGCTGCCTGCGTGTGATCAACCCTGCGGTGGGCT...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACTGCAGCCGCTGCCGCTaGGCCCGTGTGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHCSRCR*ARVSSW
Trigger: CCAGGAGGACACACGGGCTCAGCGGCAGCGGCTGCA...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACGGTGGCTGGCACATCTaGCACCTGAGTGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QPTVPSPINCSRAPHMLDGGWHI*HLSGLG
Trigger: GCCCAGGCCACTCAGGTGTCAGATGTGCCAGCCACC...GTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CATGTGCTTGGCCACTGCCTCCAGCACCCCAAATCCCTGCCTGAGGCTGGGGAGCCTCGATGGTCTGGATaGGCTGGCTGCAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: HVLGHCLQHPKSLPEAGEPRWSG*AGCSSR
Trigger: ACGAGAACTGCAGCCAGCTCATCCAGACCATCGAGG...CTCCCCAGCCTCAGGCAGGGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp ATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCCCCAAATCCCTGCCTaGGGCTGGGGAGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: IQGPQPTVPSPINCSRAPPQIPA*GWGETS
Trigger: AGAGGTCTCTCCCCAGCCTCAGGCAGGGATTTGGGG...GGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGAT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp GCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGCACATCTGGAGGAACTaGCGTGCCGGCCTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: AAELPTCWTITPYKGCGQHIWRN*RAGLAQ
Trigger: CTGCGCCAGGCCGGCACGGCAGTTCCTCCAGATGTG...CTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGGGAGGTGCTGCAGCTTaGGAGTGCGAAGGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGGGAAA*ECEGGA
Trigger: CGCCCCACCTTCGCACTCCCAAGCTGCAGCACCTCC...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp AGGAGGAACTGGACAGCGGAGGAAGTAGCTAGGGCATGTGCTTGGCCACTGCCTGGCGCAGCGAATGGATaGGGATTCGGTCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RRNWTAEEVARACAWPLPGAANG*GFGPPP
Trigger: AGGAGGCGGACCGAATCCTCATCCATTCGCTGCGCC...AGGCAGTGGCCAAGCACATGCCCTAGCTACTTCCTCCGCTGTCCAGTTCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGCGGTGCTTCTCCCACTaGCCCGCCAAGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGRCFSH*PAKWMT
Trigger: GGTCATCCACTTGGCGGGTCAGTGGGAGAAGCACCG...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp ATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCAAGGTCTGCACATCTaGAGGAACTGCCGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: IQGPQPTVPSPINCSRAPQGLHI*RNCRAG
Trigger: GCCGGCACGGCAGTTCCTCCAGATGTGCAGACCTTG...GGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp GCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGCAGAGCTGCAGGGCATaGTGTTCGAGGAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: AELPTCWTITPYKGCGQWQSCRA*CSRSEA
Trigger: GGCCTCGCTCCTCGAACACCATGCCCTGCAGCTCTG...CCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp GCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGAGGCGGGATGTCCGGTaGACCCAGTCCTCATCCCCT +
Preference number: 4 (lower is better)
Translates to: AAELPTCWTITPYKGCGQRRDVR*TQSSSP
Trigger: AGGGGATGAGGACTGGGTCCACCGGACATCCCGCCT...CTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp ATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCGTACTCAGCGAGGAGTaGGACCCGGTGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: IQGPQPTVPSPINCSRAPVLSEE*DPVLLP
Trigger: TGGGAGAAGCACCGGGTCCCACTCCTCGCTGAGTAC...GGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp GCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGGCTAGGGCATGTGCTTaGCCACTGCCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: AAELPTCWTITPYKGCGQARACA*PLPPAP
Trigger: GGGTGCTGGAGGCAGTGGCCAAGCACATGCCCTAGC...CTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAACCAGCTCAGTGGTaGAGGCGCGCAAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSSPHAGLSPHIRVAVSGQPAQW*RRARSA
Trigger: TGCAGACCTTGCGCGCCTTCACCACTGAGCTGGTTG...CCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp ATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCTGCCTGCACAAAGCTaGCGCCCAGGGTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: IQGPQPTVPSPINCSRAPLPAQS*RPGSSC
Trigger: ACATGAAGACCCTGGGCGTCAGCTTTGTGCAGGCAG...GGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp GCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGCACGCTCTGCTGTACTaGGCTTGCTGTGCCGGCACT +
Preference number: 4 (lower is better)
Translates to: AAELPTCWTITPYKGCGQHALLY*ACCAGT
Trigger: AGTGCCGGCACAGCAAGCTCAGTACAGCAGAGCGTG...CTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCTCGAACCTCCCGCATaGTGGTGCCTGTGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PSSPHAGLSPHIRVAVSGLEPPA*WCLCPR
Trigger: TCGAGGACACAGGCACCATCATGCGGGAGGTTCGAG...CCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp ATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCAGAAACCCTGCTCCGTaGTCGCGGTCCACAGAGTGT +
Preference number: 4 (lower is better)
Translates to: IQGPQPTVPSPINCSRAPRNPAP*SRSTEC
Trigger: ACACTCTGTGGACCGCGAGCACGGAGCAGGGTTTCT...GGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp AGGAGGAACTGGACAGCGGAGGAAGTAGCTAGGGCATGTGCTTGGCCACTGCCTGATAGCCCAGGTCCATaGAGGCCTGAGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: RRNWTAEEVARACAWPLPDSPGP*RPEPGS
Trigger: TGAGCCTGGCTCAGGCCTGCATGGACCTGGGCTATC...AGGCAGTGGCCAAGCACATGCCCTAGCTACTTCCTCCGCTGTCCAGTTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp ATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCACCTGCAGGCTGGTCTaGATCCTCAGAGGCATCGGT +
Preference number: 4 (lower is better)
Translates to: IQGPQPTVPSPINCSRAPTCRLV*ILRGIG
Trigger: ACCGATGCCTCTGAGGATGCAGACCAGCCTGCAGGT...GGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTTCAGGCGCAGGGCCTaGTCACGCTCTGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: QPTVPSPINCSRAPHMLDFRRRA*SRSAVL
Trigger: CAGTACAGCAGAGCGTGAGCAGGCCCTGCGCCTGAA...GTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGCTGGGGAGAGACCTCTaGCGGCGGCTCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PNKLQPSSPHAGLSPHIRLGRDL*RRLLRP
Trigger: AGGCCTGAGGAGCCGCCGGCAGAGGTCTCTCCCCAG...CCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp ATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCATGTGCTTGGCCACTaGCTCCAGCACCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: IQGPQPTVPSPINCSRAPHVLGH*LQHPKS
Trigger: GGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACATG...GGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACGGTCCGCCTCCTCCATaGTGGAGCCGTGTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHGPPPP*WSRVGV
Trigger: GACTCCGACACGGCTCCACCATGGAGGAGGCGGACC...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACACTGCCGTGCCGGCCTaGCGCAGCGAATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHTAVPA*RSEWMR
Trigger: CCTCATCCATTCGCTGCGCCAGGCCGGCACGGCAGT...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCCTGAGCCAGGCTCATaGCCAGGCGGAACCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LFGIQGPQPTVPSPINCSPEPGS*PGGTGQ
Trigger: CTGCCCGGTTCCGCCTGGCCATGAGCCTGGCTCAGG...GCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp AGGAGGAACTGGACAGCGGAGGAAGTAGCTAGGGCATGTGCTTGGCCACTGCCTGCAGCTTGGCAAGGTTaGCAGTCCCATCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RRNWTAEEVARACAWPLPAAWQG*QSHRAA
Trigger: TGCTGCCCGATGGGACTGCCAACCTTGCCAAGCTGC...AGGCAGTGGCCAAGCACATGCCCTAGCTACTTCCTCCGCTGTCCAGTTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp AGGAGGAACTGGACAGCGGAGGAAGTAGCTAGGGCATGTGCTTGGCCACTGCCTGCCGGGACACATCTCTaGGCAGAGTCTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RRNWTAEEVARACAWPLPAGTHL*AESPAL
Trigger: CAGAGCTGGAGACTCTGCCCAGAGATGTGTCCCGGC...AGGCAGTGGCCAAGCACATGCCCTAGCTACTTCCTCCGCTGTCCAGTTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGGAAAGTGTAGTTCTGTaGGCGAGCACGGCGCATGCC +
Preference number: 4 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGESVVL*ASTAHA
Trigger: GGCATGCGCCGTGCTCGCTCACAGAACTACACTTTC...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCGGCACATCTGACACCTaGGTGGCCTGGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCGTSDT*VAWAWG
Trigger: GCCCCAGGCCCAGGCCACTCAGGTGTCAGATGTGCC...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp AGGAGGAACTGGACAGCGGAGGAAGTAGCTAGGGCATGTGCTTGGCCACTGCCTCTCCTGTTCCTGAGCTaGCCACGTGACCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RRNWTAEEVARACAWPLPLLFLS*PRDLFR
Trigger: CCTGAACAGGTCACGTGGGCAGCTCAGGAACAGGAG...AGGCAGTGGCCAAGCACATGCCCTAGCTACTTCCTCCGCTGTCCAGTTCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCACTCAGACTCTGCCTaGACAAAGCTGACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSSPHAGLSPHIRVAVSGHSDSA*TKLTPR
Trigger: CCTGGGCGTCAGCTTTGTGCAGGCAGAGTCTGAGTG...CCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCAAGACCTCCTCCTTCCTaGGGGCCTCTTCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: HSTVPNKLQPSSPHAGLSRPPPS*GPLQQP
Trigger: CGGCTGCTGAAGAGGCCCGCAGGAAGGAGGAGGTCT...TGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCCACGATCTCCAGGATaGGCTGGGTGTAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHPRSPG*AGCRPA
Trigger: GGCTGGCCTACACCCAGCGCATCCTGGAGATCGTGG...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCAGCCTGGCGCAGCGAATaGATGAGGATTCGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: HSTVPNKLQPSSPHAGLSAWRSE*MRIRSA
Trigger: GGCGGACCGAATCCTCATCCATTCGCTGCGCCAGGC...TGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGCAAGGCAGTGCCAGCTaGTCCCGAATTTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGQGSAS*SRIWLP
Trigger: TGGGAGCCAAATTCGGGACCAGCTGGCACTGCCTTG...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCAGCATGGAAAGGCTTCTaGAGGGCCGAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HSTVPNKLQPSSPHAGLSAWKGF*RAEPWR
Trigger: CCTCCAGGGCTCGGCCCTCCAGAAGCCTTTCCATGC...TGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp AGGAGGAACTGGACAGCGGAGGAAGTAGCTAGGGCATGTGCTTGGCCACTGCCTGCACGACCAGCCTGCTaGCATGGAAAGGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RRNWTAEEVARACAWPLPARPAC*HGKASG
Trigger: TCCAGAAGCCTTTCCATGCCAGCAGGCTGGTCGTGC...AGGCAGTGGCCAAGCACATGCCCTAGCTACTTCCTCCGCTGTCCAGTTCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACCGCAGCAGGAGGAACTaGACAGCGGAGGAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: QPTVPSPINCSRAPHMLDRSRRN*TAEEVA
Trigger: AGCTACTTCCTCCGCTGTCCAGTTCCTCCTGCTGCG...GTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCCAGTGGGCAGGGGTCTaGGTCCAAGGCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCQWAGV*VQGRSR
Trigger: CCTGCTGCGGCCTTGGACCCAGACCCCTGCCCACTG...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CATGTGCTTGGCCACTGCCTCCAGCACCCCAAATCCCTGCCTGAGGCTGGGGAGGAGCTCCCCACATGCTaGACTATCACCCCATATAAG +
Preference number: 4 (lower is better)
Translates to: HVLGHCLQHPKSLPEAGEELPTC*TITPYK
Trigger: CTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTC...CTCCCCAGCCTCAGGCAGGGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCGGAGGAGAATAGCTaGGTCACCTGCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: HSTVPNKLQPSSPHAGLSPEENS*VTCRLV
Trigger: GACCAGCCTGCAGGTGACTCAGCTATTCTCCTCCGG...TGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCAACCCTTCCAACAGGCTaGGGCACCTGGGTAGGGACT +
Preference number: 4 (lower is better)
Translates to: HSTVPNKLQPSSPHAGLSTLPTG*GTWVGT
Trigger: AGTCCCTACCCAGGTGCCTCAGCCTGTTGGAAGGGT...TGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGTCTTCTCCAGGTTGCTaGGGGTCTTCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSSPHAGLSPHIRVAVSGSSPGC*GSSCPA
Trigger: AGCTGGGCAAGAAGACCCTCAGCAACCTGGAGAAGA...CCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCGGGACCCAAGGCAGTaGCAGCTGGTCCCGAATTTG +
Preference number: 4 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHRDPRQ*QLVPNL
Trigger: CAAATTCGGGACCAGCTGGCACTGCCTTGGGTCCCG...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp GCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGAGATGCTCAGTCAGTTaGTTTTGCAGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AELPTCWTITPYKGCGQWRCSVS*FCSRCR
Trigger: GCGGCAGCGGCTGCAAAAGCAACTGACTGAGCATCT...CCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp GCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTCTGCTTCCGGATGTTaGCCACGATCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: AAELPTCWTITPYKGCGQSASGC*PRSPGC
Trigger: GCATCCTGGAGATCGTGGGCAACATCCGGAAGCAGA...CTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp GCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGGCCGAGCTCCCCACATaGTGGACTATCACCCCATAT +
Preference number: 4 (lower is better)
Translates to: AAELPTCWTITPYKGCGQAELPT*WTITPY
Trigger: ATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGC...CTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp GCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCCTGGGGCTCCAGATaGAAGGTGAACTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: AELPTCWTITPYKGCGQWAWGSR*KVNFSE
Trigger: CTCAGAGAAGTTCACCTTCCATCTGGAGCCCCAGGC...CCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGCCACAAGCTGCAGCTTaGCAAGGTTGGCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGPQAAA*QGWQSH
Trigger: ATGGGACTGCCAACCTTGCCAAGCTGCAGCTTGTGG...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp AGGAGGAACTGGACAGCGGAGGAAGTAGCTAGGGCATGTGCTTGGCCACTGCCTGTGTCCTCGATGGTCTaGATGAGCTGGCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RRNWTAEEVARACAWPLPVSSMV*MSWLQF
Trigger: GAACTGCAGCCAGCTCATCCAGACCATCGAGGACAC...AGGCAGTGGCCAAGCACATGCCCTAGCTACTTCCTCCGCTGTCCAGTTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp TTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCGACCCGCCAAGTGGATaGCCCGCTGGGCACTATTCT +
Preference number: 4 (lower is better)
Translates to: LFGIQGPQPTVPSPINCSDPPSG*PAGHYS
Trigger: AGAATAGTGCCCAGCGGGTCATCCACTTGGCGGGTC...GCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CATGTGCTTGGCCACTGCCTCCAGCACCCCAAATCCCTGCCTGAGGCTGGGGAGGAGTTGATTTCCTTCTaGAGCTCCTTCGTATCAGAC +
Preference number: 4 (lower is better)
Translates to: HVLGHCLQHPKSLPEAGEELISF*SSFVSD
Trigger: GTCTGATACGAAGGAGCTTCAGAAGGAAATCAACTC...CTCCCCAGCCTCAGGCAGGGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp GCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGCCTCAACCTCCTCAATaGTGCGGTTCACTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: AELPTCWTITPYKGCGQWPQPPQ*CGSLLP
Trigger: TGGAAGGAGTGAACCGCAGCATTGAGGAGGTTGAGG...CCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACGCCCGGACACTCTGGTaGAGTTCTTGGATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHARTLW*SSWISA
Trigger: GGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGC...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp GCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGTGATCTCTTCCTTCTaGTTCCGGATGTTGCCCACG +
Preference number: 4 (lower is better)
Translates to: AELPTCWTITPYKGCGQWVISSF*FRMLPT
Trigger: CGTGGGCAACATCCGGAAGCAGAAGGAAGAGATCAC...CCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCGGGTCCGAGAAAGTaGGGAGCAGCTGTAGAAACC +
Preference number: 4 (lower is better)
Translates to: HSTVPNKLQPSSPHAGLSPGPRK*GAAVET
Trigger: GGTTTCTACAGCTGCTCCCCACTTTCTCGGACCCGG...TGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCTTGGGAGTGCGAAGGTaGGGCGGGACCCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCLGVRR*GGTQGS
Trigger: ACTGCCTTGGGTCCCGCCCCACCTTCGCACTCCCAA...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp GCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGAAGTGGATGACCCGCTaGGCACTATTCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: AELPTCWTITPYKGCGQWKWMTR*ALFSTT
Trigger: TGTGGTGGAGAATAGTGCCCAGCGGGTCATCCACTT...CCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGAAGGCGCGCAAGGTCTaGACATCTGGAGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: PNKLQPSSPHAGLSPHIRKARKV*TSGGTA
Trigger: GGCAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTT...CCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp AGGAGGAACTGGACAGCGGAGGAAGTAGCTAGGGCATGTGCTTGGCCACTGCCTCAGCTTTGGCGCAGATaGTCAGTCAGTTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: RRNWTAEEVARACAWPLPQLWRR*SVSCFC
Trigger: GCAAAAGCAACTGACTGAGCATCTGCGCCAAAGCTG...AGGCAGTGGCCAAGCACATGCCCTAGCTACTTCCTCCGCTGTCCAGTTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTACTGAGCTTGCTGTaGCGGCACTCAGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: PNKLQPSSPHAGLSPHIRVLSLL*RHSDSA
Trigger: GGCAGAGTCTGAGTGCCGGCACAGCAAGCTCAGTAC...CCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGAGCTCTCTGCAATCCTaGAGCTTTCGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PNKLQPSSPHAGLSPHIRSSLQS*SFRRWR
Trigger: CCGCCACCTCCGAAAGCTGCAGGATTGCAGAGAGCT...CCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp AGGAGGAACTGGACAGCGGAGGAAGTAGCTAGGGCATGTGCTTGGCCACTGCCTCAGTTCTTGGATCTCTaGCAGCCGTCGAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: RRNWTAEEVARACAWPLPQFLDL*QPSRRF
Trigger: GAATCTTCTCGACGGCTGGCAGAGATCCAAGAACTG...AGGCAGTGGCCAAGCACATGCCCTAGCTACTTCCTCCGCTGTCCAGTTCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGACCCCATATAAGGGTTaGGGTCAGTGGGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PNKLQPSSPHAGLSPHIRTPYKG*GQWAGV
Trigger: GACCCCTGCCCACTGACCGCAACCCTTATATGGGGT...CCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TCATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGGGAACCGGGCAGACATaGCAAGAGGCAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SFIWDPRPPTHSTVPNKLGTGQT*QEAAEG
Trigger: GCCCTCTGCTGCCTCTTGCCATGTCTGCCCGGTTCC...CAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACTCTGGAACTCAATTCTaGCACGACCAGCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHSGTQF*HDQPAG
Trigger: GCCAGCAGGCTGGTCGTGCCAGAATTGAGTTCCAGA...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCCCGTGGCTCACCTCTaGAACTCAATTCTGGCACGA +
Preference number: 4 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHPVAHL*NSILAR
Trigger: TCGTGCCAGAATTGAGTTCCAGAGGTGAGCCACGGG...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCTGCAGCTTTCGGAGGTaGCGGTACTCAGCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LFGIQGPQPTVPSPINCSCSFRR*RYSARS
Trigger: ACTCCTCGCTGAGTACCGCCACCTCCGAAAGCTGCA...GCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAAGGGTTGCGGTCAGTaGGCAGGGGTCTGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCKGCGQ*AGVWVQ
Trigger: TTGGACCCAGACCCCTGCCCACTGACCGCAACCCTT...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCGAAGGTGAACTTCTCTaGGTGCGTGAAGCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCEGELL*VREAGA
Trigger: GGCTCCCGCTTCACGCACTCAGAGAAGTTCACCTTC...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp TCATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGTCGAGCTCCTGTTCCTaGGCTGCCCACGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: SFIWDPRPPTHSTVPNKLSSSCS*AAHVTC
Trigger: ACAGGTCACGTGGGCAGCTCAGGAACAGGAGCTCGA...CAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGCAGACAAGATCTTGGTaGTCTCTTCCTTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGQTRSW*SLPSAS
Trigger: GGAAGCAGAAGGAAGAGATCACCAAGATCTTGTCTG...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp TCATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGGTCTGCTGGCAGAGCTaGAGGGCATGGTGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: SFIWDPRPPTHSTVPNKLVCWQS*RAWCSR
Trigger: CCTCGAACACCATGCCCTGCAGCTCTGCCAGCAGAC...CAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCTTCACTCCTTCCAGCTaGTCCCGAAGGGACTCGAGC +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCFTPSS*SRRDSS
Trigger: GCTCGAGTCCCTTCGGGAGCAGCTGGAAGGAGTGAA...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp TTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGGGCCTGCTCACGCTCTaGTGTACTGAGCTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: FIWDPRPPTHSTVPNKLQGLLTL*CTELAV
Trigger: CACAGCAAGCTCAGTACAGCAGAGCGTGAGCAGGCC...CTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCCCGTCCCCAATAAACTaGAGCCGAGCTCCCCACATG +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCPSPIN*SRAPHM
Trigger: CATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGG...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACGGAGGTCAGGCTCACTaGGGTAGAGGAAGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHGGQAH*GRGSSD
Trigger: ATCAGAACTTCCTCTACCCCAGTGAGCCTGACCTCC...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TCATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCCTCAGAGGCATCGGTaGGCAGACGCTCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SFIWDPRPPTHSTVPNKLPQRHR*ADAQPR
Trigger: TCTTGGCTGAGCGTCTGCCCACCGATGCCTCTGAGG...CAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TCATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGAGCTGGTCCCGAATTTaGCTCCCAATGGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SFIWDPRPPTHSTVPNKLSWSRI*LPMARR
Trigger: CCTCCGGGCCATTGGGAGCCAAATTCGGGACCAGCT...CAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCAGGCCCCAGCTTTaGCGCAGATGCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCSRPQL*RRCSVS
Trigger: ACTGACTGAGCATCTGCGCCAAAGCTGGGGCCTGCT...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGGCCGCCCGGACACTCTaGTGCAGTTCTTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: FIWDPRPPTHSTVPNKLQAARTL*CSSWIS
Trigger: AGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGC...CTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCGTGTCACGGGTCGTGTaGGGAGAGTTGGAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: LFGIQGPQPTVPSPINCSVSRVV*GELESV
Trigger: TACACTTTCCAACTCTCCCCACACGACCCGTGACAC...GCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCCTCTGGTGCAGTTCTTaGATCTCTGCCAGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCLWCSS*ISASRR
Trigger: TCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAG...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp TTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCATGGTCTGGATGAGCTaGCTGCAGTTCTCGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LFGIQGPQPTVPSPINCSMVWMS*LQFSCR
Trigger: TCTGCACGAGAACTGCAGCCAGCTCATCCAGACCAT...GCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCTTCTCCACCACAAGCTaGAGCTTGGCAAGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCFSTTS*SLARLA
Trigger: TGCCAACCTTGCCAAGCTGCAGCTTGTGGTGGAGAA...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp CCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGAAGATTCCAGCTCTCTaGAATCCTGCAGCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: PNKLQPSSPHAGLSPHIRKIPAL*NPAAFG
Trigger: TCCGAAAGCTGCAGGATTGCAGAGAGCTGGAATCTT...CCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR GCA 90 bp TTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCTGGCTGCAGTTCTCGTaGAGAGCAGCTAGATACTTA +
Preference number: 4 (lower is better)
Translates to: LFGIQGPQPTVPSPINCSWLQFS*RAARYL
Trigger: TAAGTATCTAGCTGCTCTGCACGAGAACTGCAGCCA...GCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CCA 90 bp CACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCAAACTACTCATTTATTTaGGATCCAAGGCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: HSTVPNKLQPSSPHAGLSNYSFI*DPRPPT
Trigger: GGTTGGGGGCCTTGGATCCCAAATAAATGAGTAGTT...TGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCTCCCAGATAGGGAGTTaGTTTCCTTCTGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCSQIGS*FPSEAP
Trigger: AGGAGCTTCAGAAGGAAATCAACTCCCTATCTGGGA...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR TCA 90 bp CATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCCCTTCTTGGCATCCTTaGACACAAGCTCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: HLFGIQGPQPTVPSPINCPSWHP*TQAHQS
Trigger: TGACTGATGAGCTTGTGTTCAAGGATGCCAAGAAGG...GCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 90 bp GCCTCCAGCACCCCAAATCCCTGCCTGAGGCTGGGGAGAGACCTCTaGCGGCGGCTCCTCAGGCCTCCCGGACCCGGCCTAGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: ASSTPNPCLRLGRDL*RRLLRPPGPGLGGQ
Trigger: CTGGCCTCCTAGGCCGGGTCCGGGAGGCCTGAGGAGCCGCCGGCAGAGGTCTCTCCCCAGCCTCAGGCAGGGATTTGGGGTGCTGGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 90 bp CAGCTCCACCGCGCGGCTCTTCAGGCGCAGGGCCTGCTCACGCTCTaGTGTACTGAGCTTGCTGTGCCGGCACTCAGACTCTGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: QLHRAALQAQGLLTL*CTELAVPALRLCLH
Trigger: GTGCAGGCAGAGTCTGAGTGCCGGCACAGCAAGCTCAGTACAGCAGAGCGTGAGCAGGCCCTGCGCCTGAAGAGCCGCGCGGTGGAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 90 bp GCTCCAAGGGATAGCCCAGGTCCATGCAGGCCTGAGCCAGGCTCATaGCCAGGCGGAACCGGGCAGACATGGCAAGAGGCAGCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: APRDSPGPCRPEPGS*PGGTGQTWQEAAEG
Trigger: GCCCTCTGCTGCCTCTTGCCATGTCTGCCCGGTTCCGCCTGGCCATGAGCCTGGCTCAGGCCTGCATGGACCTGGGCTATCCCTTGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000490300.1
CDS GCA 90 bp GTGCTGCAGCTTGGGAGTGCGAAGGTGGGGCGGGACCCAAGGCAGTaGCAGCTGGTCCCGAATTTGGCTCCCAATGGCCCGGAGGAGAAT +
Preference number: 5 (lower is better)
Translates to: VLQLGSAKVGRDPRQ*QLVPNLAPNGPEEN
Trigger: ATTCTCCTCCGGGCCATTGGGAGCCAAATTCGGGACCAGCTGGCACTGCCTTGGGTCCCGCCCCACCTTCGCACTCCCAAGCTGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376227.4
ENST00000490300.1
ENST00000496651.5
CDS CCA 90 bp CGAAGGTGGGGCGGGACCCAAGGCAGTGCCAGCTGGTCCCGAATTTaGCTCCCAATGGCCCGGAGGAGAATAGCTGAGTCACCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: RRWGGTQGSASWSRI*LPMARRRIAESPAG
Trigger: GCCTGCAGGTGACTCAGCTATTCTCCTCCGGGCCATTGGGAGCCAAATTCGGGACCAGCTGGCACTGCCTTGGGTCCCGCCCCACCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376227.4
ENST00000490300.1
ENST00000496651.5
CDS TCA 90 bp TCACACGCAGGCAGCGGACCACAGCCTCTACAACCAGCTCAGTGGTaGAGGCGCGCAAGGTCTGCACATCTGGAGGAACTGCCGTGCCGG +
Preference number: 5 (lower is better)
Translates to: SHAGSGPQPLQPAQW*RRARSAHLEELPCR
Trigger: CCGGCACGGCAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTTCACCACTGAGCTGGTTGTAGAGGCTGTGGTCCGCTGCCTGCGTGTGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000496651.5
CDS TCA 90 bp AGGTGGCGGTACTCAGCGAGGAGTGGGACCCGGTGCTTCTCCCACTaGCCCGCCAAGTGGATGACCCGCTGGGCACTATTCTCCACCACA +
Preference number: 5 (lower is better)
Translates to: RWRYSARSGTRCFSH*PAKWMTRWALFSTT
Trigger: TGTGGTGGAGAATAGTGCCCAGCGGGTCATCCACTTGGCGGGTCAGTGGGAGAAGCACCGGGTCCCACTCCTCGCTGAGTACCGCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 90 bp ACCGGGTCCGAGAAAGTGGGGAGCAGCTGTAGAAACCCTGCTCCGTaGTCGCGGTCCACAGAGTGTCACGGGTCGTGTGGGGAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: TGSEKVGSSCRNPAP*SRSTECHGSCGESW
Trigger: CCAACTCTCCCCACACGACCCGTGACACTCTGTGGACCGCGAGCACGGAGCAGGGTTTCTACAGCTGCTCCCCACTTTCTCGGACCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000496651.5
CDS GCA 90 bp GTGGCCTGGGCCTGGGGCTCCAGATGGAAGGTGAACTTCTCTGAGTaGGTGAAGCGGGAGCCCTTAGGAGCACCAGTCTTGGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: VAWAWGSRWKVNFSE*VKREPLGAPVLAPA
Trigger: TGCTGGGGCCAAGACTGGTGCTCCTAAGGGCTCCCGCTTCACGCACTCAGAGAAGTTCACCTTCCATCTGGAGCCCCAGGCCCAGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 90 bp AGCTTGGGAGTGCGAAGGTGGGGCGGGACCCAAGGCAGTGCCAGCTaGTCCCGAATTTGGCTCCCAATGGCCCGGAGGAGAATAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SLGVRRWGGTQGSAS*SRIWLPMARRRIAE
Trigger: CTCAGCTATTCTCCTCCGGGCCATTGGGAGCCAAATTCGGGACCAGCTGGCACTGCCTTGGGTCCCGCCCCACCTTCGCACTCCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376227.4
ENST00000490300.1
ENST00000496651.5
CDS CCA 90 bp CCCGTGGCTCACCTCTGGAACTCAATTCTGGCACGACCAGCCTGCTaGCATGGAAAGGCTTCTGGAGGGCCGAGCCCTGGAGGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: PVAHLWNSILARPAC*HGKASGGPSPGGAA
Trigger: TGCAGCACCTCCAGGGCTCGGCCCTCCAGAAGCCTTTCCATGCCAGCAGGCTGGTCGTGCCAGAATTGAGTTCCAGAGGTGAGCCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376227.4
ENST00000490300.1
ENST00000496651.5
CDS TCA 90 bp CCTGGCGGAGGGCTCGGTAGTCCTCCCGGATCTTCTCCAGGTTGCTaGGGGTCTTCTTGCCCAGCTCTGTCTCGATCTGCTCCTCGAGGT +
Preference number: 5 (lower is better)
Translates to: PGGGLGSPPGSSPGC*GSSCPALSRSAPRG
Trigger: ACCTCGAGGAGCAGATCGAGACAGAGCTGGGCAAGAAGACCCTCAGCAACCTGGAGAAGATCCGGGAGGACTACCGAGCCCTCCGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 90 bp ACCTCCTCCTTCCTGCGGGCCTCTTCAGCAGCCGCCCGGACACTCTaGTGCAGTTCTTGGATCTCTGCCAGCCGTCGAGAAGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: TSSFLRASSAAARTL*CSSWISASRREDSS
Trigger: GCTGGAATCTTCTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGCTGCTGAAGAGGCCCGCAGGAAGGAGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp GCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTTAGGAGCACCAGTCTaGGCCCCAGCACCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AAELPTCWTITPYKGCGQLGAPV*APAPQA
Trigger: GGCCTGGGGTGCTGGGGCCAAGACTGGTGCTCCTAA...CTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 90 bp TCCTCCTTCCTGCGGGCCTCTTCAGCAGCCGCCCGGACACTCTGGTaGAGTTCTTGGATCTCTGCCAGCCGTCGAGAAGATTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SSFLRASSAAARTLW*SSWISASRREDSSS
Trigger: AGAGCTGGAATCTTCTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGCTGCTGAAGAGGCCCGCAGGAAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 90 bp CTGCGGGCCTCTTCAGCAGCCGCCCGGACACTCTGGTGCAGTTCTTaGATCTCTGCCAGCCGTCGAGAAGATTCCAGCTCTCTGCAATCC +
Preference number: 5 (lower is better)
Translates to: LRASSAAARTLWCSS*ISASRREDSSSLQS
Trigger: GGATTGCAGAGAGCTGGAATCTTCTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGCTGCTGAAGAGGCCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACGAGCCCACCGCAGGGTaGATCACACGCAGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHEPTAG*ITRRQR
Trigger: CCGCTGCCTGCGTGTGATCAACCCTGCGGTGGGCTC...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp CAACCCACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTGCAGCTTGGCAAGGTaGGCAGTCCCATCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: QPTVPSPINCSRAPHMLDCSLAR*AVPSGS
Trigger: GCTGCCCGATGGGACTGCCAACCTTGCCAAGCTGCA...GTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGTGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp GCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGCTCAGTCAGTTGCTTTaGCAGCCGCTGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: AELPTCWTITPYKGCGQWLSQLL*QPLPLS
Trigger: GCTCAGCGGCAGCGGCTGCAAAAGCAACTGACTGAG...CCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp GCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGAAGCAGGCCCCAGCTTaGGCGCAGATGCTCAGTCAG +
Preference number: 5 (lower is better)
Translates to: AELPTCWTITPYKGCGQWKQAPA*AQMLSQ
Trigger: CTGACTGAGCATCTGCGCCAAAGCTGGGGCCTGCTT...CCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 90 bp GAGTCTCCAGCTCTGACATCAGCTGCTTATAGACCTCCTCCTTCCTaGGGGCCTCTTCAGCAGCCGCCCGGACACTCTGGTGCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: ESPALTSAAYRPPPS*GPLQQPPGHSGAVL
Trigger: AAGAACTGCACCAGAGTGTCCGGGCGGCTGCTGAAGAGGCCCGCAGGAAGGAGGAGGTCTATAAGCAGCTGATGTCAGAGCTGGAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 90 bp CGATCTCCAGGATGCGCTGGGTGTAGGCCAGCCGGGACACATCTCTaGGCAGAGTCTCCAGCTCTGACATCAGCTGCTTATAGACCTCCT +
Preference number: 5 (lower is better)
Translates to: RSPGCAGCRPAGTHL*AESPALTSAAYRPP
Trigger: AGGAGGTCTATAAGCAGCTGATGTCAGAGCTGGAGACTCTGCCCAGAGATGTGTCCCGGCTGGCCTACACCCAGCGCATCCTGGAGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGTCTGCTGTACTGAGCTaGCTGTGCCGGCACTCAGAC +
Preference number: 5 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGSAVLS*LCRHSD
Trigger: GTCTGAGTGCCGGCACAGCAAGCTCAGTACAGCAGA...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGACCACAAGCTGCAGCTaGGCAAGGTTGGCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGTTSCS*ARLAVP
Trigger: TGGGACTGCCAACCTTGCCAAGCTGCAGCTTGTGGT...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp CATGTGCTTGGCCACTGCCTCCAGCACCCCAAATCCCTGCCTGAGGCTGGGGAGACAGCATCGTCCTTCTaGGCATCCTTGAACACAAGC +
Preference number: 5 (lower is better)
Translates to: HVLGHCLQHPKSLPEAGETASSF*ASLNTS
Trigger: GCTTGTGTTCAAGGATGCCAAGAAGGACGATGCTGT...CTCCCCAGCCTCAGGCAGGGATTTGGGGTGCTGGAGGCAGTGGCCAAGCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 90 bp CTCTTCAGCAGCCGCCCGGACACTCTGGTGCAGTTCTTGGATCTCTaGCAGCCGTCGAGAAGATTCCAGCTCTCTGCAATCCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LFSSRPDTLVQFLDL*QPSRRFQLSAILQL
Trigger: AAGCTGCAGGATTGCAGAGAGCTGGAATCTTCTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGCTGCTGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 90 bp CAGCTCAGTGGTGAAGGCGCGCAAGGTCTGCACATCTGGAGGAACTaGCCTGAAGAAGGGGACCAGCTTGATCGCAGGAATAGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: QLSGEGAQGLHIWRN*PEEGDQLDRRNSQA
Trigger: TGCCTGACTATTCCTGCGATCAAGCTGGTCCCCTTCTTCAGGGCAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTTCACCACTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490300.1
CDS GCA 90 bp ACCACAGCCTCTACAACCAGCTCAGTGGTGAAGGCGCGCAAGGTCTaGACATCTGGAGGAACTGCCCTGAAGAAGGGGACCAGCTTGATC +
Preference number: 5 (lower is better)
Translates to: TTASTTSSVVKARKV*TSGGTALKKGTSLI
Trigger: GATCAAGCTGGTCCCCTTCTTCAGGGCAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTTCACCACTGAGCTGGTTGTAGAGGCTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490300.1
CDS-3UTR CAA 90 bp TTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGCCAGCTGGTCCCGAATTaGGCTCCCAATGGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: LFGIQGPQPTVPSPINCSQLVPN*APNGPE
Trigger: CTCCGGGCCATTGGGAGCCAAATTCGGGACCAGCTG...GCTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp TCATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGTCCCAGGTCCCGGGCTaGTATGGGGGCCCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: SFIWDPRPPTHSTVPNKLSQVPG*YGGPKQ
Trigger: CTGCTTGGGGCCCCCATACAAGCCCGGGACCTGGGA...CAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp TCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGTGGGCAGGGGTTCTGCTTCCGGATGTaGCCCACGATCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: SPHAGLSPHIRVAVSGQGFCFRM*PTISRM
Trigger: CATCCTGGAGATCGTGGGCAACATCCGGAAGCAGAA...CCCCTGCCCACTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 90 bp CTCTACAACCAGCTCAGTGGTGAAGGCGCGCAAGGTCTGCACATCTaGAGGAACTGCCCTGAAGAAGGGGACCAGCTTGATCGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LYNQLSGEGAQGLHI*RNCPEEGDQLDRRN
Trigger: ATTCCTGCGATCAAGCTGGTCCCCTTCTTCAGGGCAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTTCACCACTGAGCTGGTTGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490300.1
CDS-3UTR CAA 90 bp ACAGTACCGTCCCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCAGATGCTCAGTCAGTaGCTTTTGCAGCCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: TVPSPINCSRAPHMLDYHQMLSQ*LLQPLP
Trigger: CGGCAGCGGCTGCAAAAGCAACTGACTGAGCATCTG...GTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGGGACGGTACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp CCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGACTCTGGTGCAGTTCTaGGATCTCTGCCAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: PNKLQPSSPHAGLSPHIRTLVQF*DLCQPS
Trigger: CGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGT...CCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp GCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTTGCGGTCAGGAACTACTCATTTATTaGGGATCCAAGGCCCCCAAC +
Preference number: 5 (lower is better)
Translates to: AAELPTCWTITPYKGCGQELLIY*GSKAPN
Trigger: GTTGGGGGCCTTGGATCCCAAATAAATGAGTAGTTC...CTGACCGCAACCCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 90 bp TGCAGCCTTTTGGAAACACTAGTACCAGGGTCGGGGCAGGGAGGATaGCTACAGTTCAGACAGATCCTGGATGTTGGTGACTGTGACTTC +
Preference number: 5 (lower is better)
Translates to: CSLLETLVPGSGQGG*LQFRQILDVGDCDF
Trigger: GAAGTCACAGTCACCAACATCCAGGATCTGTCTGAACTGTAGGCATCCTCCCTGCCCCGACCCTGGTACTAGTGTTTCCAAAAGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490300.1
CDS-3UTR CAA 90 bp TTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGCAGTTGCTGAGGGTCTTCTaGCCCAGCTCTGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: FIWDPRPPTHSTVPNKLQLLRVF*PSSVSI
Trigger: GATCGAGACAGAGCTGGGCAAGAAGACCCTCAGCAA...CTGCAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp CCCAATAAACTGCAGCCGAGCTCCCCACATGCTGGACTATCACCCCATATAAGGGTATCAGACAAGATCTaGGTGATCTCTTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PNKLQPSSPHAGLSPHIRVSDKI*VISSFC
Trigger: GCAGAAGGAAGAGATCACCAAGATCTTGTCTGATAC...CCTTATATGGGGTGATAGTCCAGCATGTGGGGAGCTCGGCTGCAGTTTATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS TCA 90 bp GCAAACGTCCGGTCCAGCTTCCCAGATAGGGAGTTGATTTCCTTCTaGAGCTCCTTCGTATCAGACAAGATCTTGGTGATCTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ANVRSSFPDRELISF*SSFVSDKILVISSF
Trigger: GAAGGAAGAGATCACCAAGATCTTGTCTGATACGAAGGAGCTTCAGAAGGAAATCAACTCCCTATCTGGGAAGCTGGACCGGACGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS-3UTR CAA 90 bp TCATTTATTTGGGATCCAAGGCCCCCAACCCACAGTACCGTCCCCAATAAACTGTCCTTCTTGGCATCCTaGAACACAAGCTCATCAGTC +
Preference number: 5 (lower is better)
Translates to: SFIWDPRPPTHSTVPNKLSFLAS*NTSSSV
Trigger: GACTGATGAGCTTGTGTTCAAGGATGCCAAGAAGGA...CAGTTTATTGGGGACGGTACTGTGGGTTGGGGGCCTTGGATCCCAAATAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 72 bp GAGGCGGGATGTCCGGTGGACCCAGTCCTCATCCCCTaGCCGGTCCCGGCCCGTCTGCTGGCAGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: EAGCPVDPVLIP*PVPARLLAELQ
Trigger: CTGCAGCTCTGCCAGCAGACGGGCCGGGACCGGCCAGGGGATGAGGACTGGGTCCACCGGACATCCCGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000496651.5
CDS GCA 72 bp TCCCCTGGCCGGTCCCGGCCCGTCTGCTGGCAGAGCTaGAGGGCATGGTGTTCGAGGAGCGAGGCCACCCTT +
Preference number: 6 (lower is better)
Translates to: SPGRSRPVCWQS*RAWCSRSEATL
Trigger: AAGGGTGGCCTCGCTCCTCGAACACCATGCCCTGCAGCTCTGCCAGCAGACGGGCCGGGACCGGCCAGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000496651.5
CDS GCA 72 bp ACCCCAAATCCCTGCCTGAGGCTGGGGAGAGACCTCTaGCGGCGGCTCCTCAGGCCTCCCGGACCCGGCCTA +
Preference number: 6 (lower is better)
Translates to: TPNPCLRLGRDL*RRLLRPPGPGL
Trigger: TAGGCCGGGTCCGGGAGGCCTGAGGAGCCGCCGGCAGAGGTCTCTCCCCAGCCTCAGGCAGGGATTTGGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 72 bp CGGTCCCGGCCCGTCTGCTGGCAGAGCTGCAGGGCATaGTGTTCGAGGAGCGAGGCCACCCTTCCAACAGGC +
Preference number: 6 (lower is better)
Translates to: RSRPVCWQSCRA*CSRSEATLPTG
Trigger: GCCTGTTGGAAGGGTGGCCTCGCTCCTCGAACACCATGCCCTGCAGCTCTGCCAGCAGACGGGCCGGGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000496651.5
CDS TCA 72 bp GACCTGTTCAGGCCGCCGGGAGGTGGCTGGCACATCTaGCACCTGAGTGGCCTGGGCCTGGGGCTCCAGATG +
Preference number: 6 (lower is better)
Translates to: DLFRPPGGGWHI*HLSGLGLGLQM
Trigger: CATCTGGAGCCCCAGGCCCAGGCCACTCAGGTGTCAGATGTGCCAGCCACCTCCCGGCGGCCTGAACAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS TCA 72 bp GAGGAACTGCCGTGCCGGCCTGGCGCAGCGAATGGATaGGGATTCGGTCCGCCTCCTCCATGGTGGAGCCGT +
Preference number: 6 (lower is better)
Translates to: EELPCRPGAANG*GFGPPPPWWSR
Trigger: ACGGCTCCACCATGGAGGAGGCGGACCGAATCCTCATCCATTCGCTGCGCCAGGCCGGCACGGCAGTTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000496651.5
CDS GCA 72 bp CGCGCGGCTCTTCAGGCGCAGGGCCTGCTCACGCTCTaGTGTACTGAGCTTGCTGTGCCGGCACTCAGACTC +
Preference number: 6 (lower is better)
Translates to: RAALQAQGLLTL*CTELAVPALRL
Trigger: GAGTCTGAGTGCCGGCACAGCAAGCTCAGTACAGCAGAGCGTGAGCAGGCCCTGCGCCTGAAGAGCCGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 72 bp AGTCGGGGGCTGGGTCCAGGACCGGGTCCGAGAAAGTaGGGAGCAGCTGTAGAAACCCTGCTCCGTGCTCGC +
Preference number: 6 (lower is better)
Translates to: SRGLGPGPGPRK*GAAVETLLRAR
Trigger: GCGAGCACGGAGCAGGGTTTCTACAGCTGCTCCCCACTTTCTCGGACCCGGTCCTGGACCCAGCCCCCGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000496651.5
CDS CCA 72 bp GTGCGAAGGTGGGGCGGGACCCAAGGCAGTGCCAGCTaGTCCCGAATTTGGCTCCCAATGGCCCGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: VRRWGGTQGSAS*SRIWLPMARRR
Trigger: TCTCCTCCGGGCCATTGGGAGCCAAATTCGGGACCAGCTGGCACTGCCTTGGGTCCCGCCCCACCTTCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376227.4
ENST00000490300.1
ENST00000496651.5
CDS CAA 90 bp CCCAAGCAGGCCCCAGCTTTGGCGCAGATGCTCAGTCAGTTGCTTTaGCAGCCGCTGCCGCTGAGCCCGTGTGTCCTCCTGGGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: PKQAPALAQMLSQLL*QPLPLSPCVLLGWE
Trigger: CTCCCACCCCAGGAGGACACACGGGCTCAGCGGCAGCGGCTGCAAAAGCAACTGACTGAGCATCTGCGCCAAAGCTGGGGCCTGCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 72 bp TCTGGAGGAACTGCCGTGCCGGCCTGGCGCAGCGAATaGATGAGGATTCGGTCCGCCTCCTCCATGGTGGAG +
Preference number: 6 (lower is better)
Translates to: SGGTAVPAWRSE*MRIRSASSMVE
Trigger: CTCCACCATGGAGGAGGCGGACCGAATCCTCATCCATTCGCTGCGCCAGGCCGGCACGGCAGTTCCTCCAGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000496651.5
CDS CCA 72 bp CAGCTCAGTGGTGAAGGCGCGCAAGGTCTGCACATCTaGAGGAACTGCCGTGCCGGCCTGGCGCAGCGAATG +
Preference number: 6 (lower is better)
Translates to: QLSGEGAQGLHI*RNCRAGLAQRM
Trigger: CATTCGCTGCGCCAGGCCGGCACGGCAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTTCACCACTGAGCTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000496651.5
CDS CCA 72 bp CTGCAGCTTTCGGAGGTGGCGGTACTCAGCGAGGAGTaGGACCCGGTGCTTCTCCCACTGACCCGCCAAGTG +
Preference number: 6 (lower is better)
Translates to: LQLSEVAVLSEE*DPVLLPLTRQV
Trigger: CACTTGGCGGGTCAGTGGGAGAAGCACCGGGTCCCACTCCTCGCTGAGTACCGCCACCTCCGAAAGCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 72 bp CACTATTCTCCACCACAAGCTGCAGCTTGGCAAGGTTaGCAGTCCCATCGGGCAGCAGCTCCACCGCGCGGC +
Preference number: 6 (lower is better)
Translates to: HYSPPQAAAWQG*QSHRAAAPPRG
Trigger: GCCGCGCGGTGGAGCTGCTGCCCGATGGGACTGCCAACCTTGCCAAGCTGCAGCTTGTGGTGGAGAATAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CAA 72 bp GCACTATTCTCCACCACAAGCTGCAGCTTGGCAAGGTaGGCAGTCCCATCGGGCAGCAGCTCCACCGCGCGG +
Preference number: 6 (lower is better)
Translates to: ALFSTTSCSLAR*AVPSGSSSTAR
Trigger: CCGCGCGGTGGAGCTGCTGCCCGATGGGACTGCCAACCTTGCCAAGCTGCAGCTTGTGGTGGAGAATAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS TCA 72 bp TCTTCAGGCGCAGGGCCTGCTCACGCTCTGCTGTACTaGGCTTGCTGTGCCGGCACTCAGACTCTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: SSGAGPAHALLY*ACCAGTQTLPA
Trigger: TGCAGGCAGAGTCTGAGTGCCGGCACAGCAAGCTCAGTACAGCAGAGCGTGAGCAGGCCCTGCGCCTGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS TCA 72 bp TACTCAGCGAGGAGTGGGACCCGGTGCTTCTCCCACTaGCCCGCCAAGTGGATGACCCGCTGGGCACTATTC +
Preference number: 6 (lower is better)
Translates to: YSARSGTRCFSH*PAKWMTRWALF
Trigger: GAATAGTGCCCAGCGGGTCATCCACTTGGCGGGTCAGTGGGAGAAGCACCGGGTCCCACTCCTCGCTGAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 72 bp GAGAAAGTGGGGAGCAGCTGTAGAAACCCTGCTCCGTaGTCGCGGTCCACAGAGTGTCACGGGTCGTGTGGG +
Preference number: 6 (lower is better)
Translates to: EKVGSSCRNPAP*SRSTECHGSCG
Trigger: CCCACACGACCCGTGACACTCTGTGGACCGCGAGCACGGAGCAGGGTTTCTACAGCTGCTCCCCACTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376227.4
ENST00000496651.5
CDS GCA 72 bp CGCCCAGGGTCTTCATGTCGGCCTCAACCTCCTCAATaGTGCGGTTCACTCCTTCCAGCTGCTCCCGAAGGG +
Preference number: 6 (lower is better)
Translates to: RPGSSCRPQPPQ*CGSLLPAAPEG
Trigger: CCCTTCGGGAGCAGCTGGAAGGAGTGAACCGCAGCATTGAGGAGGTTGAGGCCGACATGAAGACCCTGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 72 bp CTGCGGGCCTCTTCAGCAGCCGCCCGGACACTCTGGTaGAGTTCTTGGATCTCTGCCAGCCGTCGAGAAGAT +
Preference number: 6 (lower is better)
Translates to: LRASSAAARTLW*SSWISASRRED
Trigger: ATCTTCTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGCTGCTGAAGAGGCCCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 72 bp CCTTCTGCTTCCGGATGTTGCCCACGATCTCCAGGATaGGCTGGGTGTAGGCCAGCCGGGACACATCTCTGG +
Preference number: 6 (lower is better)
Translates to: PSASGCCPRSPG*AGCRPAGTHLW
Trigger: CCAGAGATGTGTCCCGGCTGGCCTACACCCAGCGCATCCTGGAGATCGTGGGCAACATCCGGAAGCAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CAA 72 bp AAGCAGGCCCCAGCTTTGGCGCAGATGCTCAGTCAGTaGCTTTTGCAGCCGCTGCCGCTGAGCCCGTGTGTC +
Preference number: 6 (lower is better)
Translates to: KQAPALAQMLSQ*LLQPLPLSPCV
Trigger: GACACACGGGCTCAGCGGCAGCGGCTGCAAAAGCAACTGACTGAGCATCTGCGCCAAAGCTGGGGCCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CAA 72 bp AGGCGCAGGGCCTGCTCACGCTCTGCTGTACTGAGCTaGCTGTGCCGGCACTCAGACTCTGCCTGCACAAAG +
Preference number: 6 (lower is better)
Translates to: RRRACSRSAVLS*LCRHSDSACTK
Trigger: CTTTGTGCAGGCAGAGTCTGAGTGCCGGCACAGCAAGCTCAGTACAGCAGAGCGTGAGCAGGCCCTGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CAA 90 bp CCTGCGGGCCTCTTCAGCAGCCGCCCGGACACTCTGGTGCAGTTCTaGGATCTCTGCCAGCCGTCGAGAAGATTCCAGCTCTCTGCAATC +
Preference number: 6 (lower is better)
Translates to: PAGLFSSRPDTLVQF*DLCQPSRRFQLSAI
Trigger: GATTGCAGAGAGCTGGAATCTTCTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGCTGCTGAAGAGGCCCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS TCA 72 bp GGCAGCGGACCACAGCCTCTACAACCAGCTCAGTGGTaGAGGCGCGCAAGGTCTGCACATCTGGAGGAACTG +
Preference number: 6 (lower is better)
Translates to: GSGPQPLQPAQW*RRARSAHLEEL
Trigger: CAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTTCACCACTGAGCTGGTTGTAGAGGCTGTGGTCCGCTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376227.4
ENST00000490300.1
ENST00000496651.5
CDS TCA 72 bp CTGGGCCTGGGGCTCCAGATGGAAGGTGAACTTCTCTaGGTGCGTGAAGCGGGAGCCCTTAGGAGCACCAGT +
Preference number: 6 (lower is better)
Translates to: LGLGLQMEGELL*VREAGALRSTS
Trigger: ACTGGTGCTCCTAAGGGCTCCCGCTTCACGCACTCAGAGAAGTTCACCTTCCATCTGGAGCCCCAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 72 bp GCTCTGACATCAGCTGCTTATAGACCTCCTCCTTCCTaGGGGCCTCTTCAGCAGCCGCCCGGACACTCTGGT +
Preference number: 6 (lower is better)
Translates to: ALTSAAYRPPPS*GPLQQPPGHSG
Trigger: ACCAGAGTGTCCGGGCGGCTGCTGAAGAGGCCCGCAGGAAGGAGGAGGTCTATAAGCAGCTGATGTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 72 bp CACCTCTGGAACTCAATTCTGGCACGACCAGCCTGCTaGCATGGAAAGGCTTCTGGAGGGCCGAGCCCTGGA +
Preference number: 6 (lower is better)
Translates to: HLWNSILARPAC*HGKASGGPSPG
Trigger: TCCAGGGCTCGGCCCTCCAGAAGCCTTTCCATGCCAGCAGGCTGGTCGTGCCAGAATTGAGTTCCAGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376227.4
ENST00000490300.1
ENST00000496651.5
CDS CCA 72 bp GATTCCAGCTCTCTGCAATCCTGCAGCTTTCGGAGGTaGCGGTACTCAGCGAGGAGTGGGACCCGGTGCTTC +
Preference number: 6 (lower is better)
Translates to: DSSSLQSCSFRR*RYSARSGTRCF
Trigger: GAAGCACCGGGTCCCACTCCTCGCTGAGTACCGCCACCTCCGAAAGCTGCAGGATTGCAGAGAGCTGGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS TCA 72 bp GGGCTCGGTAGTCCTCCCGGATCTTCTCCAGGTTGCTaGGGGTCTTCTTGCCCAGCTCTGTCTCGATCTGCT +
Preference number: 6 (lower is better)
Translates to: GLGSPPGSSPGC*GSSCPALSRSA
Trigger: AGCAGATCGAGACAGAGCTGGGCAAGAAGACCCTCAGCAACCTGGAGAAGATCCGGGAGGACTACCGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 72 bp GCCTGGGGCTCCAGATGGAAGGTGAACTTCTCTGAGTaGGTGAAGCGGGAGCCCTTAGGAGCACCAGTCTTG +
Preference number: 6 (lower is better)
Translates to: AWGSRWKVNFSE*VKREPLGAPVL
Trigger: CAAGACTGGTGCTCCTAAGGGCTCCCGCTTCACGCACTCAGAGAAGTTCACCTTCCATCTGGAGCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 72 bp ACCTCCCGCATGATGGTGCCTGTGTCCTCGATGGTCTaGATGAGCTGGCTGCAGTTCTCGTGCAGAGCAGCT +
Preference number: 6 (lower is better)
Translates to: TSRMMVPVSSMV*MSWLQFSCRAA
Trigger: AGCTGCTCTGCACGAGAACTGCAGCCAGCTCATCCAGACCATCGAGGACACAGGCACCATCATGCGGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CAA 72 bp CTCTTCAGCAGCCGCCCGGACACTCTGGTGCAGTTCTaGGATCTCTGCCAGCCGTCGAGAAGATTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LFSSRPDTLVQF*DLCQPSRRFQL
Trigger: GAGCTGGAATCTTCTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGCTGCTGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 72 bp AGCCGCCCGGACACTCTGGTGCAGTTCTTGGATCTCTaGCAGCCGTCGAGAAGATTCCAGCTCTCTGCAATC +
Preference number: 6 (lower is better)
Translates to: SRPDTLVQFLDL*QPSRRFQLSAI
Trigger: GATTGCAGAGAGCTGGAATCTTCTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS GCA 72 bp GGTGAAGGCGCGCAAGGTCTGCACATCTGGAGGAACTaGCCTGAAGAAGGGGACCAGCTTGATCGCAGGAAT +
Preference number: 6 (lower is better)
Translates to: GEGAQGLHIWRN*PEEGDQLDRRN
Trigger: ATTCCTGCGATCAAGCTGGTCCCCTTCTTCAGGGCAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490300.1
CDS GCA 72 bp TCTACAACCAGCTCAGTGGTGAAGGCGCGCAAGGTCTaGACATCTGGAGGAACTGCCCTGAAGAAGGGGACC +
Preference number: 6 (lower is better)
Translates to: STTSSVVKARKV*TSGGTALKKGT
Trigger: GGTCCCCTTCTTCAGGGCAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTTCACCACTGAGCTGGTTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490300.1
CDS CCA 72 bp TCTTCAGCAGCCGCCCGGACACTCTGGTGCAGTTCTTaGATCTCTGCCAGCCGTCGAGAAGATTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SSAAARTLWCSS*ISASRREDSSS
Trigger: AGAGCTGGAATCTTCTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGCTGCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CCA 72 bp CAGCTCAGTGGTGAAGGCGCGCAAGGTCTGCACATCTaGAGGAACTGCCCTGAAGAAGGGGACCAGCTTGAT +
Preference number: 6 (lower is better)
Translates to: QLSGEGAQGLHI*RNCPEEGDQLD
Trigger: ATCAAGCTGGTCCCCTTCTTCAGGGCAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTTCACCACTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490300.1
CDS CAA 72 bp TCCTCCCGGATCTTCTCCAGGTTGCTGAGGGTCTTCTaGCCCAGCTCTGTCTCGATCTGCTCCTCGAGGTCT +
Preference number: 6 (lower is better)
Translates to: SSRIFSRLLRVF*PSSVSICSSRS
Trigger: AGACCTCGAGGAGCAGATCGAGACAGAGCTGGGCAAGAAGACCCTCAGCAACCTGGAGAAGATCCGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CAA 72 bp ACATCTGGAGGAACTGCCCTGAAGAAGGGGACCAGCTaGATCGCAGGAATAGTCAGGCAACAGGGATCAGGC +
Preference number: 6 (lower is better)
Translates to: TSGGTALKKGTS*IAGIVRQQGSG
Trigger: GCCTGATCCCTGTTGCCTGACTATTCCTGCGATCAAGCTGGTCCCCTTCTTCAGGGCAGTTCCTCCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490300.1
CDS GCA 72 bp TTGGAAACACTAGTACCAGGGTCGGGGCAGGGAGGATaGCTACAGTTCAGACAGATCCTGGATGTTGGTGAC +
Preference number: 6 (lower is better)
Translates to: LETLVPGSGQGG*LQFRQILDVGD
Trigger: GTCACCAACATCCAGGATCTGTCTGAACTGTAGGCATCCTCCCTGCCCCGACCCTGGTACTAGTGTTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490300.1
CDS TCA 72 bp CCGCAAACGTCCGGTCCAGCTTCCCAGATAGGGAGTTaGTTTCCTTCTGAAGCTCCTTCGTATCAGACAAGA +
Preference number: 6 (lower is better)
Translates to: PQTSGPASQIGS*FPSEAPSYQTR
Trigger: TCTTGTCTGATACGAAGGAGCTTCAGAAGGAAATCAACTCCCTATCTGGGAAGCTGGACCGGACGTTTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS TCA 72 bp CGGTCCAGCTTCCCAGATAGGGAGTTGATTTCCTTCTaGAGCTCCTTCGTATCAGACAAGATCTTGGTGATC +
Preference number: 6 (lower is better)
Translates to: RSSFPDRELISF*SSFVSDKILVI
Trigger: GATCACCAAGATCTTGTCTGATACGAAGGAGCTTCAGAAGGAAATCAACTCCCTATCTGGGAAGCTGGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376227.4
CDS CAA 72 bp AGGGAGGATGCCTACAGTTCAGACAGATCCTGGATGTaGGTGACTGTGACTTCCATTTGGAAAACCAGGAAC +
Preference number: 6 (lower is better)
Translates to: REDAYSSDRSWM*VTVTSIWKTRN
Trigger: GTTCCTGGTTTTCCAAATGGAAGTCACAGTCACCAACATCCAGGATCTGTCTGAACTGTAGGCATCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490300.1
CDS CAA 72 bp AGACAGATCCTGGATGTTGGTGACTGTGACTTCCATTaGGAAAACCAGGAACTAGGGAAATCCTCAAGTCCT +
Preference number: 6 (lower is better)
Translates to: RQILDVGDCDFH*ENQELGKSSSP
Trigger: AGGACTTGAGGATTTCCCTAGTTCCTGGTTTTCCAAATGGAAGTCACAGTCACCAACATCCAGGATCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490300.1