RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC201 (Homo sapiens)

Ensembl gene IDs: ENSG00000283247

Ensembl transcript IDs: ENST00000636578.2

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAACAGCATTGGGGGCCAGCCCAAGGAGGGCACCATGTGGACGATaGAGCCAGCCCAAGGCAGGCAGCTCTAGAGCACCCTGCCTTCCT +
Preference number: 1 (lower is better)
Translates to: ATALGASPRRAPCGR*SQPKAGSSRAPCLP
Trigger: AGGAAGGCAGGGTGCTCTAGAGCTGCCTGCCTTGGGCTGGCTTCATCGTCCACATGGTGCCCTCCTTGGGCTGGCCCCCAATGCTGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 90 bp AACCTGAGGCTCAGACAAGCAGAGAGCTGTCTCCAAGGCCAGAGCTaGGCAGTGGAAAACCCAGGGCTCAAGTTACACACCATGCAGAGC +
Preference number: 1 (lower is better)
Translates to: NLRLRQAESCLQGQS*AVENPGLKLHTMQS
Trigger: GCTCTGCATGGTGTGTAACTTGAGCCCTGGGTTTTCCACTGCCCAGCTCTGGCCTTGGAGACAGCTCTCTGCTTGTCTGAGCCTCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 90 bp TATGCTCATGGGGCATTGGCCCAACTCTTTCCTGAGAAGGCTGAGTaGCTACGGCCGCCCTCGCCTAGACATCAGCTCCACAGTCATTTC +
Preference number: 1 (lower is better)
Translates to: YAHGALAQLFPEKAE*LRPPSPRHQLHSHF
Trigger: GAAATGACTGTGGAGCTGATGTCTAGGCGAGGGCGGCCGTAGCCACTCAGCCTTCTCAGGAAAGAGTTGGGCCAATGCCCCATGAGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 90 bp CTTCAGGCCTTCAATCCTGCTGTCTCAAATATGCTCATGGGGCATTaGCCCAACTCTTTCCTGAGAAGGCTGAGTGGCTACGGCCGCCCT +
Preference number: 1 (lower is better)
Translates to: LQAFNPAVSNMLMGH*PNSFLRRLSGYGRP
Trigger: AGGGCGGCCGTAGCCACTCAGCCTTCTCAGGAAAGAGTTGGGCCAATGCCCCATGAGCATATTTGAGACAGCAGGATTGAAGGCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR GCA 90 bp CATGCAGTGTGGGTGGACTGGCCTCTGAGTTCCTCTAAGCTTCCTTaGCTTTATCTGCAAACATCCTGGGATCCCACAGTCTGGTTTCTC +
Preference number: 1 (lower is better)
Translates to: HAVWVDWPLSSSKLP*LYLQTSWDPTVWFL
Trigger: GAGAAACCAGACTGTGGGATCCCAGGATGTTTGCAGATAAAGGCAAGGAAGCTTAGAGGAACTCAGAGGCCAGTCCACCCACACTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 90 bp CCCTCGCCTAGACATCAGCTCCACAGTCATTTCATCAGTCTGGGATaGGGTTTCCTCATGTGTCAGGTAAGGAACCTGAGGCTCAGACAA +
Preference number: 1 (lower is better)
Translates to: PSPRHQLHSHFISLG*GFLMCQVRNLRLRQ
Trigger: TTGTCTGAGCCTCAGGTTCCTTACCTGACACATGAGGAAACCCCATCCCAGACTGATGAAATGACTGTGGAGCTGATGTCTAGGCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR TCA 90 bp CACATAAGGGAAGGGAACATACATCCCTCACCATTGGTGCTCCAATaGGACCACCATAACCATAGGGTTGGAAACCCACCATCCAGTGCA +
Preference number: 1 (lower is better)
Translates to: HIREGNIHPSPLVLQ*DHHNHRVGNPPSSA
Trigger: TGCACTGGATGGTGGGTTTCCAACCCTATGGTTATGGTGGTCTCATTGGAGCACCAATGGTGAGGGATGTATGTTCCCTTCCCTTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR GCA 90 bp GGTTGGAAACCCACCATCCAGTGCAGAGATTTTCTTTCCAGTTCCTaGTTCAGGCCTTCAATCCTGCTGTCTCAAATATGCTCATGGGGC +
Preference number: 1 (lower is better)
Translates to: GWKPTIQCRDFLSSS*FRPSILLSQICSWG
Trigger: GCCCCATGAGCATATTTGAGACAGCAGGATTGAAGGCCTGAAGCAGGAACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTTCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR GCA 90 bp CCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATaGCTTCCAGGTGAGAATCACGGTTTTGGGGCTTTCCTAGAGTGG +
Preference number: 1 (lower is better)
Translates to: PTHSTNTASTLRFPE*LPGENHGFGAFLEW
Trigger: CCACTCTAGGAAAGCCCCAAAACCGTGATTCTCACCTGGAAGGCATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR TCA 90 bp AACAAACACAGCCAGCACTCTCAGATTTCCAGAATGCCTTCCAGGTaGGAATCACGGTTTTGGGGCTTTCCTAGAGTGGCATTTCAGGCT +
Preference number: 1 (lower is better)
Translates to: NKHSQHSQISRMPSR*ESRFWGFPRVAFQA
Trigger: AGCCTGAAATGCCACTCTAGGAAAGCCCCAAAACCGTGATTCTCACCTGGAAGGCATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 90 bp AAGCTTCCTTGCCTTTATCTGCAAACATCCTGGGATCCCACAGTCTaGTTTCTCCTACAGCCTATTGAGGAAGGAGGTAGGTACCCTCTA +
Preference number: 1 (lower is better)
Translates to: KLPCLYLQTSWDPTV*FLLQPIEEGGRYPL
Trigger: TAGAGGGTACCTACCTCCTTCCTCAATAGGCTGTAGGAGAAACCAGACTGTGGGATCCCAGGATGTTTGCAGATAAAGGCAAGGAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 90 bp CCTCTGAGTTCCTCTAAGCTTCCTTGCCTTTATCTGCAAACATCCTaGGATCCCACAGTCTGGTTTCTCCTACAGCCTATTGAGGAAGGA +
Preference number: 1 (lower is better)
Translates to: PLSSSKLPCLYLQTS*DPTVWFLLQPIEEG
Trigger: TCCTTCCTCAATAGGCTGTAGGAGAAACCAGACTGTGGGATCCCAGGATGTTTGCAGATAAAGGCAAGGAAGCTTAGAGGAACTCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR GCA 90 bp AGTGCAGAGATTTTCTTTCCAGTTCCTGCTTCAGGCCTTCAATCCTaGTGTCTCAAATATGCTCATGGGGCATTGGCCCAACTCTTTCCT +
Preference number: 1 (lower is better)
Translates to: SAEIFFPVPASGLQS*CLKYAHGALAQLFP
Trigger: AGGAAAGAGTTGGGCCAATGCCCCATGAGCATATTTGAGACAGCAGGATTGAAGGCCTGAAGCAGGAACTGGAAAGAAAATCTCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR GCA 90 bp TGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCAGTTaGTTCAGGCTATCTGATGTGTATGTGCATGTCACGGGATATGAT +
Preference number: 1 (lower is better)
Translates to: CHQLRLFSLLLWIFS*FRLSDVYVHVTGYD
Trigger: ATCATATCCCGTGACATGCACATACACATCAGATAGCCTGAAGCAACTGAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR TCA 90 bp TTATCCCAAATAATTGCTGCAAGTTACATTATGCTTACCTCTAAGTaGGCATTGTTGGTGTTATTACCAGGGCTATTGTTTAGCTGTTTA +
Preference number: 1 (lower is better)
Translates to: LSQIIAASYIMLTSK*ALLVLLPGLLFSCL
Trigger: TAAACAGCTAAACAATAGCCCTGGTAATAACACCAACAATGCTCACTTAGAGGTAAGCATAATGTAACTTGCAGCAATTATTTGGGATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CAA 90 bp GCTTCAGGCCTTCAATCCTGCTGTCTCAAATATGCTCATGGGGCATaGGCCCAACTCTTTCCTGAGAAGGCTGAGTGGCTACGGCCGCCC +
Preference number: 2 (lower is better)
Translates to: ASGLQSCCLKYAHGA*AQLFPEKAEWLRPP
Trigger: GGGCGGCCGTAGCCACTCAGCCTTCTCAGGAAAGAGTTGGGCCAATGCCCCATGAGCATATTTGAGACAGCAGGATTGAAGGCCTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp TTGGCCCAACTCTTTCCTGAGAAGGCTGAGTGGCTACGGCCGCCCTCGCCTAGAGTTTTTCCCACCCCATaGAGAAGGGCAACAGCATTG +
Preference number: 2 (lower is better)
Translates to: LAQLFPEKAEWLRPPSPRVFPTP*RRATAL
Trigger: CAATGCTGTTGCCCTTCTCCATGGGGTGGGAAAAAC...TCTAGGCGAGGGCGGCCGTAGCCACTCAGCCTTCTCAGGAAAGAGTTGGGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATCCTGAGAAGGCTGAGTaGCTACGGCCGCCCTCGCCT +
Preference number: 2 (lower is better)
Translates to: PLALHTQQTQPALSDFQNPEKAE*LRPPSP
Trigger: AGGCGAGGGCGGCCGTAGCCACTCAGCCTTCTCAGG...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp AGTCTCAGATTTCATCTAGGGGTTGCCCTTCTCACTGACTCCAGATGCCAGCCCCTAGGGGTGGGACTATaGGCACTCCCCTCCTCTCAA +
Preference number: 2 (lower is better)
Translates to: SLRFHLGVALLTDSRCQPLGVGL*ALPSSQ
Trigger: TTGAGAGGAGGGGAGTGCCCATAGTCCCACCCCTAG...GGGCTGGCATCTGGAGTCAGTGAGAAGGGCAACCCCTAGATGAAATCTGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR GCA 90 bp CCCTCCTCTCAAAACCTGGTTCCTCTCCACATAAGGGAAGGGAACATACATCCCAGCTCTAGAGCACCCTaGCTTCCTGTCCTGGCACCA +
Preference number: 2 (lower is better)
Translates to: PSSQNLVPLHIREGNIHPSSRAP*LPVLAP
Trigger: TGGTGCCAGGACAGGAAGGCAGGGTGCTCTAGAGCT...GGGATGTATGTTCCCTTCCCTTATGTGGAGAGGAACCAGGTTTTGAGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp TGTCCACACAAACAGGTCTTGCTGAGATGCCTGTACTTGGGAGAATTGATGCTGGAAGGGCAACAGCATTaGGGGCCAGCCCAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: CPHKQVLLRCLYLGELMLEGQQH*GPAQGG
Trigger: CCCTCCTTGGGCTGGCCCCCAATGCTGTTGCCCTTC...CAGCATCAATTCTCCCAAGTACAGGCATCTCAGCAAGACCTGTTTGTGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR TCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGCCGTGTCCCTCAGTCTaGGAATGCCCTGTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAPCPSV*ECPVSL
Trigger: AAGGGAGACAGGGCATTCTCAGACTGAGGGACACGG...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp TGTCCACACAAACAGGTCTTGCTGAGATGCCTGTACTTGGGAGAATTGATGCTGCTCCAAGGCCAGAGCTaGGCAGTGGAAAACCCAGGG +
Preference number: 2 (lower is better)
Translates to: CPHKQVLLRCLYLGELMLLQGQS*AVENPG
Trigger: CCCTGGGTTTTCCACTGCCCAGCTCTGGCCTTGGAG...CAGCATCAATTCTCCCAAGTACAGGCATCTCAGCAAGACCTGTTTGTGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR TCA 90 bp AGTCTCAGATTTCATCTAGGGGTTGCCCTTCTCACTGACTCCAGATGCCAGCCCCCATTGGTGCTCCAATaGGACCACCATAACCATAGG +
Preference number: 2 (lower is better)
Translates to: SLRFHLGVALLTDSRCQPPLVLQ*DHHNHR
Trigger: CCTATGGTTATGGTGGTCTCATTGGAGCACCAATGG...GGGCTGGCATCTGGAGTCAGTGAGAAGGGCAACCCCTAGATGAAATCTGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGAAGGAGGGCACCATGTaGACGATGAAGCCAGCCCAA +
Preference number: 2 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAKEGTM*TMKPAQ
Trigger: TTGGGCTGGCTTCATCGTCCACATGGTGCCCTCCTT...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGCCAGAGCTGGGCAGTaGAAAACCCAGGGCTCAAGT +
Preference number: 2 (lower is better)
Translates to: PLALHTQQTQPALSDFQNARAGQ*KTQGSS
Trigger: ACTTGAGCCCTGGGTTTTCCACTGCCCAGCTCTGGC...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp AGTCTCAGATTTCATCTAGGGGTTGCCCTTCTCACTGACTCCAGATGCCAGCCCATGCTCATGGGGCATTaGCCCAACTCTTTCCTGAGA +
Preference number: 2 (lower is better)
Translates to: SLRFHLGVALLTDSRCQPMLMGH*PNSFLR
Trigger: TCTCAGGAAAGAGTTGGGCCAATGCCCCATGAGCAT...GGGCTGGCATCTGGAGTCAGTGAGAAGGGCAACCCCTAGATGAAATCTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR TCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGGCATGTCACGGGATATaGTGGCTTAGCTTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAACHGI*WLSLGS
Trigger: TGAGCCCAAGCTAAGCCATCATATCCCGTGACATGC...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp TGTCCACACAAACAGGTCTTGCTGAGATGCCTGTACTTGGGAGAATTGATGCTGAGGTGTGGTGACTCCTaGAGACTTCTCAGCCATGCA +
Preference number: 2 (lower is better)
Translates to: CPHKQVLLRCLYLGELMLRCGDS*RLLSHA
Trigger: TGCATGGCTGAGAAGTCTCCAGGAGTCACCACACCT...CAGCATCAATTCTCCCAAGTACAGGCATCTCAGCAAGACCTGTTTGTGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CAA 90 bp ATCCCTCACCATTGGTGCTCCAATGAGACCACCATAACCATAGGGTaGGAAACCCACCATCCAGTGCAGAGATTTTCTTTCCAGTTCCTG +
Preference number: 2 (lower is better)
Translates to: IPHHWCSNETTITIG*ETHHPVQRFSFQFL
Trigger: CAGGAACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTTCCAACCCTATGGTTATGGTGGTCTCATTGGAGCACCAATGGTGAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR TCA 90 bp AATGAGACCACCATAACCATAGGGTTGGAAACCCACCATCCAGTGCAGAGATTTACCTGCCACCTCTGCTaGCCCTCATCAATGTCAATG +
Preference number: 2 (lower is better)
Translates to: NETTITIGLETHHPVQRFTCHLC*PSSMSM
Trigger: CATTGACATTGATGAGGGTCAGCAGAGGTGGCAGGT...AAATCTCTGCACTGGATGGTGGGTTTCCAACCCTATGGTTATGGTGGTCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR GCA 90 bp CAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGCCTTCCAGGTGAGAATCCTGCTGTCTCAAATATaGTCATGGGGCATTGGCCCA +
Preference number: 2 (lower is better)
Translates to: QQTQPALSDFQNAFQVRILLSQI*SWGIGP
Trigger: TGGGCCAATGCCCCATGAGCATATTTGAGACAGCAG...GATTCTCACCTGGAAGGCATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR GCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGATCCCTCACCATTGGTaGTCCAATGAGACCACCATA +
Preference number: 2 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAIPHHW*SNETTI
Trigger: TATGGTGGTCTCATTGGAGCACCAATGGTGAGGGAT...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR TCA 90 bp GAATTTGGAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCAGAATGCCTTCCAGGTaGGAATCACGGTTTTGGGGC +
Preference number: 2 (lower is better)
Translates to: EFGKLCSSQTETQFHRHVRMPSR*ESRFWG
Trigger: GCCCCAAAACCGTGATTCTCACCTGGAAGGCATTCT...GACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTCCAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR GCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGTTCCTTGCCTTTATCTaGAAACATCCTGGGATCCCA +
Preference number: 2 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAFLAFI*KHPGIP
Trigger: TGGGATCCCAGGATGTTTGCAGATAAAGGCAAGGAA...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR TCA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCGCACCATGTGGACGATaGAGCCAGCCCAAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFAPCGR*SQPKAG
Trigger: GCCTGCCTTGGGCTGGCTTCATCGTCCACATGGTGC...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR GCA 90 bp CCCTCCTCTCAAAACCTGGTTCCTCTCCACATAAGGGAAGGGAACATACATCCCTCAAGTTACACACCATaGAGAGCCTTGTCTTCTTTA +
Preference number: 2 (lower is better)
Translates to: PSSQNLVPLHIREGNIHPSSYTP*RALSSL
Trigger: TAAAGAAGACAAGGCTCTGCATGGTGTGTAACTTGA...GGGATGTATGTTCCCTTCCCTTATGTGGAGAGGAACCAGGTTTTGAGAGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGTCATTTCATCAGTCTaGGATGGGGTTTCCTCATGT +
Preference number: 2 (lower is better)
Translates to: PLALHTQQTQPALSDFQNVISSV*DGVSSC
Trigger: ACATGAGGAAACCCCATCCCAGACTGATGAAATGAC...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTTACATCCCTCACCATTaGTGCTCCAATGAGACCACC +
Preference number: 2 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLYIPHH*CSNETT
Trigger: GGTGGTCTCATTGGAGCACCAATGGTGAGGGATGTA...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp CAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGCCTTCCAGGTGAGAATCTATCTGCAAACATCCTaGGATCCCACAGTCTGGTTT +
Preference number: 2 (lower is better)
Translates to: QQTQPALSDFQNAFQVRIYLQTS*DPTVWF
Trigger: AAACCAGACTGTGGGATCCCAGGATGTTTGCAGATA...GATTCTCACCTGGAAGGCATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR GCA 90 bp TGTCCACACAAACAGGTCTTGCTGAGATGCCTGTACTTGGGAGAATTGATGCTGAAACCCACCATCCAGTaGAGAGATTTTCTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: CPHKQVLLRCLYLGELMLKPTIQ*RDFLSS
Trigger: ACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTT...CAGCATCAATTCTCCCAAGTACAGGCATCTCAGCAAGACCTGTTTGTGTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTTGGGATCCCACAGTCTaGTTTCTCCTACAGCCTATT +
Preference number: 2 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLWDPTV*FLLQPI
Trigger: AATAGGCTGTAGGAGAAACCAGACTGTGGGATCCCA...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTGTAGGTATCTTCCCATaGATGGAACATGTGATGTGC +
Preference number: 2 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLVGIFP*MEHVMC
Trigger: GCACATCACATGTTCCATCCATGGGAAGATACCTAC...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR GCA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTCTCAGATTTCCAGAATaGCTTCCAGGTGAGAATCAC +
Preference number: 2 (lower is better)
Translates to: AGSLSLKRESANGGGIIILRFPE*LPGENH
Trigger: GTGATTCTCACCTGGAAGGCATTCTGGAAATCTGAG...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CCA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCGGCATGTCTAGGCGCTaGGGCAGCAAGACTTGTTCT +
Preference number: 2 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFGMSRR*GSKTCS
Trigger: AGAACAAGTCTTGCTGCCCCAGCGCCTAGACATGCC...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR TCA 90 bp GAATTTGGAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCGTGAAAACATTCTTCTaGGTGCTGATAATTCCCAAT +
Preference number: 2 (lower is better)
Translates to: EFGKLCSSQTETQFHRHVVKTFF*VLIIPN
Trigger: ATTGGGAATTATCAGCACTCAGAAGAATGTTTTCAC...GACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTCCAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR GCA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTTATCTGATGTGTATGTaGATGTCACGGGATATGATG +
Preference number: 2 (lower is better)
Translates to: AGSLSLKRESANGGGIIIYLMCM*MSRDMM
Trigger: CATCATATCCCGTGACATGCACATACACATCAGATA...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR TCA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCTCTTTTAAGCCAGTCTaGGCCTATGTTTTAAGCCAG +
Preference number: 2 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFSFKPV*AYVLSQ
Trigger: CTGGCTTAAAACATAGGCTCAGACTGGCTTAAAAGA...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR GCA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCATTTTCCACCCACCCTaGAGATCTAAACTTTTCACC +
Preference number: 2 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFIFHPP*RSKLFT
Trigger: GGTGAAAAGTTTAGATCTGCAGGGTGGGTGGAAAAT...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR TCA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCGATGTGCACCATTTGTaGAATCCAAGAGATTGCATT +
Preference number: 2 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFDVHHL*NPRDCI
Trigger: AATGCAATCTCTTGGATTTCACAAATGGTGCACATC...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR GCA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCCTGCAAGTTACATTATaGTTACCTCTAAGTGAGCAT +
Preference number: 2 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFLQVTL*LPLSEH
Trigger: ATGCTCACTTAGAGGTAAGCATAATGTAACTTGCAG...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR TCA 72 bp TTGGGGGCCAGCCCAAGGAGGGCACCATGTGGACGATaGAGCCAGCCCAAGGCAGGCAGCTCTAGAGCACCC +
Preference number: 3 (lower is better)
Translates to: LGASPRRAPCGR*SQPKAGSSRAP
Trigger: GGGTGCTCTAGAGCTGCCTGCCTTGGGCTGGCTTCATCGTCCACATGGTGCCCTCCTTGGGCTGGCCCCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 72 bp GGGGCATTGGCCCAACTCTTTCCTGAGAAGGCTGAGTaGCTACGGCCGCCCTCGCCTAGACATCAGCTCCAC +
Preference number: 3 (lower is better)
Translates to: GALAQLFPEKAE*LRPPSPRHQLH
Trigger: GTGGAGCTGATGTCTAGGCGAGGGCGGCCGTAGCCACTCAGCCTTCTCAGGAAAGAGTTGGGCCAATGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CAA 90 bp CCCTCGCCTAGACATCAGCTCCACAGTCATTTCATCAGTCTGGGATGGGGTTTCAGAAGGGCAACAGCATaGGGGGCCAGCCCAAGGAGG +
Preference number: 3 (lower is better)
Translates to: PSPRHQLHSHFISLGWGFRRATA*GASPRR
Trigger: CCTCCTTGGGCTGGCCCCCAATGCTGTTGCCCTTCT...GAAACCCCATCCCAGACTGATGAAATGACTGTGGAGCTGATGTCTAGGCGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 72 bp CTCAGACAAGCAGAGAGCTGTCTCCAAGGCCAGAGCTaGGCAGTGGAAAACCCAGGGCTCAAGTTACACACC +
Preference number: 3 (lower is better)
Translates to: LRQAESCLQGQS*AVENPGLKLHT
Trigger: GGTGTGTAACTTGAGCCCTGGGTTTTCCACTGCCCAGCTCTGGCCTTGGAGACAGCTCTCTGCTTGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 72 bp AAGCAGAGAGCTGTCTCCAAGGCCAGAGCTGGGCAGTaGAAAACCCAGGGCTCAAGTTACACACCATGCAGA +
Preference number: 3 (lower is better)
Translates to: KQRAVSKARAGQ*KTQGSSYTPCR
Trigger: TCTGCATGGTGTGTAACTTGAGCCCTGGGTTTTCCACTGCCCAGCTCTGGCCTTGGAGACAGCTCTCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR GCA 72 bp GGGCAGTGGAAAACCCAGGGCTCAAGTTACACACCATaGAGAGCCTTGTCTTCTTTAACCTGCCACCTCTGC +
Preference number: 3 (lower is better)
Translates to: GQWKTQGSSYTP*RALSSLTCHLC
Trigger: GCAGAGGTGGCAGGTTAAAGAAGACAAGGCTCTGCATGGTGTGTAACTTGAGCCCTGGGTTTTCCACTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 72 bp CCAGGTGAGAATCACGGTTTTGGGGCTTTCCTAGAGTaGCATTTCAGGCTCACTAGGATACCTACCCTGCCC +
Preference number: 3 (lower is better)
Translates to: PGENHGFGAFLE*HFRLTRIPTLP
Trigger: GGGCAGGGTAGGTATCCTAGTGAGCCTGAAATGCCACTCTAGGAAAGCCCCAAAACCGTGATTCTCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CAA 90 bp AGTCTCAGATTTCATCTAGGGGTTGCCCTTCTCACTGACTCCAGATGCCAGCCCACCATAACCATAGGGTaGGAAACCCACCATCCAGTG +
Preference number: 3 (lower is better)
Translates to: SLRFHLGVALLTDSRCQPTITIG*ETHHPV
Trigger: CACTGGATGGTGGGTTTCCAACCCTATGGTTATGGT...GGGCTGGCATCTGGAGTCAGTGAGAAGGGCAACCCCTAGATGAAATCTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR TCA 72 bp GACTTCTCAGCCATGCAGTGTGGGTGGACTGGCCTCTaGGTTCCTCTAAGCTTCCTTGCCTTTATCTGCAAA +
Preference number: 3 (lower is better)
Translates to: DFSAMQCGWTGL*VPLSFLAFICK
Trigger: TTTGCAGATAAAGGCAAGGAAGCTTAGAGGAACTCAGAGGCCAGTCCACCCACACTGCATGGCTGAGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR TCA 72 bp AGCCAGCACTCTCAGATTTCCAGAATGCCTTCCAGGTaGGAATCACGGTTTTGGGGCTTTCCTAGAGTGGCA +
Preference number: 3 (lower is better)
Translates to: SQHSQISRMPSR*ESRFWGFPRVA
Trigger: TGCCACTCTAGGAAAGCCCCAAAACCGTGATTCTCACCTGGAAGGCATTCTGGAAATCTGAGAGTGCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR TCA 72 bp AAGCGGGCAGCACTCATTTCTCCGTGTCCCTCAGTCTaGGAATGCCCTGTCTCCCTTTCTAAGTTTCTCATC +
Preference number: 3 (lower is better)
Translates to: KRAALISPCPSV*ECPVSLSKFLI
Trigger: GATGAGAAACTTAGAAAGGGAGACAGGGCATTCTCAGACTGAGGGACACGGAGAAATGAGTGCTGCCCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CAA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGACACCATGCAGAGCCTaGTCTTCTTTAACCTGCCAC +
Preference number: 3 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAATPCRA*SSLTCH
Trigger: GTGGCAGGTTAAAGAAGACAAGGCTCTGCATGGTGT...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR TCA 72 bp GAAGGGAACATACATCCCTCACCATTGGTGCTCCAATaGGACCACCATAACCATAGGGTTGGAAACCCACCA +
Preference number: 3 (lower is better)
Translates to: EGNIHPSPLVLQ*DHHNHRVGNPP
Trigger: TGGTGGGTTTCCAACCCTATGGTTATGGTGGTCTCATTGGAGCACCAATGGTGAGGGATGTATGTTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 72 bp TGCCTTTATCTGCAAACATCCTGGGATCCCACAGTCTaGTTTCTCCTACAGCCTATTGAGGAAGGAGGTAGG +
Preference number: 3 (lower is better)
Translates to: CLYLQTSWDPTV*FLLQPIEEGGR
Trigger: CCTACCTCCTTCCTCAATAGGCTGTAGGAGAAACCAGACTGTGGGATCCCAGGATGTTTGCAGATAAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CCA 72 bp AAACAGAGACTCAGTTCCATAGGCATGTCTAGGCGCTaGGGCAGCAAGACTTGTTCTGTCTTTAGCTGCTTC +
Preference number: 3 (lower is better)
Translates to: KQRLSSIGMSRR*GSKTCSVFSCF
Trigger: GAAGCAGCTAAAGACAGAACAAGTCTTGCTGCCCCAGCGCCTAGACATGCCTATGGAACTGAGTCTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR GCA 72 bp TCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATaGCTTCCAGGTGAGAATCACGGTTTTGGGGCTTTC +
Preference number: 3 (lower is better)
Translates to: STNTASTLRFPE*LPGENHGFGAF
Trigger: GAAAGCCCCAAAACCGTGATTCTCACCTGGAAGGCATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CAA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTTATGCTCATGGGGCATaGGCCCAACTCTTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: AGSLSLKRESANGGGIIIYAHGA*AQLFPE
Trigger: CTCAGGAAAGAGTTGGGCCAATGCCCCATGAGCATA...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR GCA 72 bp ATTTTCTTTCCAGTTCCTGCTTCAGGCCTTCAATCCTaGTGTCTCAAATATGCTCATGGGGCATTGGCCCAA +
Preference number: 3 (lower is better)
Translates to: IFFPVPASGLQS*CLKYAHGALAQ
Trigger: TTGGGCCAATGCCCCATGAGCATATTTGAGACAGCAGGATTGAAGGCCTGAAGCAGGAACTGGAAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CAA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTATTACCTTCGTATTATaGATCACCTGGGTGGGACCC +
Preference number: 3 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLITFVL*ITWVGP
Trigger: GGGTCCCACCCAGGTGATCAATAATACGAAGGTAAT...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR GCA 72 bp ACCATAACATGTCCACACAAACAGGTCTTGCTGAGATaGCTGTACTTGGGAGAATTGATGCTGACTTTGGGT +
Preference number: 3 (lower is better)
Translates to: TITCPHKQVLLR*LYLGELMLTLG
Trigger: ACCCAAAGTCAGCATCAATTCTCCCAAGTACAGGCATCTCAGCAAGACCTGTTTGTGTGGACATGTTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CAA 90 bp GAATTTGGAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCCCAAGAGATTGCATTTaGAACACTTTAACTAGAGTG +
Preference number: 3 (lower is better)
Translates to: EFGKLCSSQTETQFHRHVPRDCI*NTLTRV
Trigger: CACTCTAGTTAAAGTGTTCAAAATGCAATCTCTTGG...GACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTCCAAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR-3UTR CAA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCCTGAGATGCCTGTACTaGGGAGAATTGATGCTGACT +
Preference number: 3 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFLRCLY*GELMLT
Trigger: AGTCAGCATCAATTCTCCCAAGTACAGGCATCTCAG...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR TCA 72 bp ATAATTGCTGCAAGTTACATTATGCTTACCTCTAAGTaGGCATTGTTGGTGTTATTACCAGGGCTATTGTTT +
Preference number: 3 (lower is better)
Translates to: IIAASYIMLTSK*ALLVLLPGLLF
Trigger: AAACAATAGCCCTGGTAATAACACCAACAATGCTCACTTAGAGGTAAGCATAATGTAACTTGCAGCAATTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp TTGGCCCAACTCTTTCCTGAGAAGGCTGAGTGGCTACGGCCGCCCTCGCCTAGATGGAGGGCTGACCCCTaGTGGGTGGGATGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LAQLFPEKAEWLRPPSPRWRADP*WVGCKV
Trigger: GACCTTGCATCCCACCCAGCAGGGGTCAGCCCTCCA...TCTAGGCGAGGGCGGCCGTAGCCACTCAGCCTTCTCAGGAAAGAGTTGGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp TTGGCCCAACTCTTTCCTGAGAAGGCTGAGTGGCTACGGCCGCCCTCGCCTAGAGCCAGAGCTGGGCAGTaGAAAACCCAGGGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: LAQLFPEKAEWLRPPSPRARAGQ*KTQGSS
Trigger: ACTTGAGCCCTGGGTTTTCCACTGCCCAGCTCTGGC...TCTAGGCGAGGGCGGCCGTAGCCACTCAGCCTTCTCAGGAAAGAGTTGGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CCCTCGCCTAGACATCAGCTCCACAGTCATTTCATCAGTCTGGGATGGGGTTTCCGGAGGGACTCTTGCTaGTGCTGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PSPRHQLHSHFISLGWGFRRDSC*CCCCCR
Trigger: GCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCG...GAAACCCCATCCCAGACTGATGAAATGACTGTGGAGCTGATGTCTAGGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CCCTCGCCTAGACATCAGCTCCACAGTCATTTCATCAGTCTGGGATGGGGTTTCACCTCCCGATGGCCTTaGGCTCCAACCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSPRHQLHSHFISLGWGFTSRWP*APTQGC
Trigger: GCAGCCCTGGGTTGGAGCCCAAGGCCATCGGGAGGT...GAAACCCCATCCCAGACTGATGAAATGACTGTGGAGCTGATGTCTAGGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CCCTCCTCTCAAAACCTGGTTCCTCTCCACATAAGGGAAGGGAACATACATCCCGGGCTGGCTTCCAAGTaGGCAGTTGCAGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: PSSQNLVPLHIREGNIHPGLASK*AVAAPT
Trigger: GGTGGGCGCTGCAACTGCCCACTTGGAAGCCAGCCC...GGGATGTATGTTCCCTTCCCTTATGTGGAGAGGAACCAGGTTTTGAGAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CCCTCCTCTCAAAACCTGGTTCCTCTCCACATAAGGGAAGGGAACATACATCCCCCTGAGAAGGCTGAGTaGCTACGGCCGCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PSSQNLVPLHIREGNIHPPEKAE*LRPPSP
Trigger: AGGCGAGGGCGGCCGTAGCCACTCAGCCTTCTCAGG...GGGATGTATGTTCCCTTCCCTTATGTGGAGAGGAACCAGGTTTTGAGAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CCCTCCTCTCAAAACCTGGTTCCTCTCCACATAAGGGAAGGGAACATACATCCCTTCCAAGTGGGCAGTTaGAGCGCCCACCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PSSQNLVPLHIREGNIHPFQVGS*SAHPVA
Trigger: GGCCACAGGGTGGGCGCTGCAACTGCCCACTTGGAA...GGGATGTATGTTCCCTTCCCTTATGTGGAGAGGAACCAGGTTTTGAGAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp GAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCTAGGCGCTGCTGCTGCTGCCGCTaGCGCTGCCGCTGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: ESFVAAKQRLSSIGMSRRCCCCR*RCRWVK
Trigger: CTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCA...GCGCCTAGACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGGCATTGGGGACCCACTaGGATAGGAGGCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAALGTH*DRRHLP
Trigger: CGGGAGGTGCCTCCTATCTCAGTGGGTCCCCAATGC...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CCCTCCTCTCAAAACCTGGTTCCTCTCCACATAAGGGAAGGGAACATACATCCCGGTTGCCCTTCTCACTaGCTCCAGATGCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: PSSQNLVPLHIREGNIHPGCPSH*LQMPAH
Trigger: GTGGGCTGGCATCTGGAGTCAGTGAGAAGGGCAACC...GGGATGTATGTTCCCTTCCCTTATGTGGAGAGGAACCAGGTTTTGAGAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGGAGGCACCTCCCGATaGCCTTGGGCTCCAACCCAG +
Preference number: 4 (lower is better)
Translates to: PLALHTQQTQPALSDFQNGGTSR*PWAPTQ
Trigger: CTGGGTTGGAGCCCAAGGCCATCGGGAGGTGCCTCC...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTCAGTGGCTGGAGGGCTaGCCCCTGCTGGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLQWLEG*PLLGGM
Trigger: CATCCCACCCAGCAGGGGTCAGCCCTCCAGCCACTG...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CTAGACATCAGCTCCACAGTCATTTCATCAGTCTGGGATGGGGTTTCCTCATGTTCGCTCCATCGCAGCTaGCCGCTTCTTCGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: LDISSTVISSVWDGVSSCSLHRS*PLLRVS
Trigger: CGAGACCCGAAGAAGCGGGCAGCTGCGATGGAGCGA...ACATGAGGAAACCCCATCCCAGACTGATGAAATGACTGTGGAGCTGATGTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp TTGGCCCAACTCTTTCCTGAGAAGGCTGAGTGGCTACGGCCGCCCTCGCCTAGACTCAGATTTCCAGAATaGCTTCCAGGTGAGAATCAC +
Preference number: 4 (lower is better)
Translates to: LAQLFPEKAEWLRPPSPRLRFPE*LPGENH
Trigger: GTGATTCTCACCTGGAAGGCATTCTGGAAATCTGAG...TCTAGGCGAGGGCGGCCGTAGCCACTCAGCCTTCTCAGGAAAGAGTTGGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCTAGGCGCCTCCAAGGCCAGAGCTaGGCAGTGGAAAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: ESFVAAKQRLSSIGMSRRLQGQS*AVENPG
Trigger: CCCTGGGTTTTCCACTGCCCAGCTCTGGCCTTGGAG...GCGCCTAGACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp ATAGGGTTGGAAACCCACCATCCAGTGCAGAGATTTTCTTTCCAGTTCCTGCTTGCACCATGTGGACGATaGAGCCAGCCCAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IGLETHHPVQRFSFQFLLAPCGR*SQPKAG
Trigger: GCCTGCCTTGGGCTGGCTTCATCGTCCACATGGTGC...AAGCAGGAACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTTCCAACCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGGCTCCATCCTGCTTTaGCTCTGGGGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PLALHTQQTQPALSDFQNGSILL*LWGWLP
Trigger: TGGAAGCCAGCCCCAGAGGCAAAGCAGGATGGAGCC...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCTAGGCGCTTTCCTAACAGTGGCTaGAGGGCTGACCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESFVAAKQRLSSIGMSRRFPNSG*RADPCW
Trigger: CCAGCAGGGGTCAGCCCTCCAGCCACTGTTAGGAAA...GCGCCTAGACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp AATGAGACCACCATAACCATAGGGTTGGAAACCCACCATCCAGTGCAGAGATTTCGCTGCCGCTGCCGCTaGGTTAAGGAGGCTGATGTG +
Preference number: 4 (lower is better)
Translates to: NETTITIGLETHHPVQRFRCRCR*VKEADV
Trigger: CACATCAGCCTCCTTAACCCAGCGGCAGCGGCAGCG...AAATCTCTGCACTGGATGGTGGGTTTCCAACCCTATGGTTATGGTGGTCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCTAGGCGCCTAGGGGTGGGACTATaGGCACTCCCCTCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: ESFVAAKQRLSSIGMSRRLGVGL*ALPSSQ
Trigger: TTGAGAGGAGGGGAGTGCCCATAGTCCCACCCCTAG...GCGCCTAGACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGCTCAGCCATGCAGTGTaGGTGGACTGGCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAALSHAV*VDWPLS
Trigger: ACTCAGAGGCCAGTCCACCCACACTGCATGGCTGAG...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATTCAAGGTGGGGCTCCTaGTTGCTAGAGAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLALHTQQTQPALSDFQNSRWGS*LLERGS
Trigger: AGAGCCCCTCTCTAGCAATCAGGAGCCCCACCTTGA...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CCCTCCTCTCAAAACCTGGTTCCTCTCCACATAAGGGAAGGGAACATACATCCCTGGGATGCAAGGTCCTaGGAGAAGTGTGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: PSSQNLVPLHIREGNIHPWDARS*EKCAGI
Trigger: AATGCCTGCACACTTCTCTCAGGACCTTGCATCCCA...GGGATGTATGTTCCCTTCCCTTATGTGGAGAGGAACCAGGTTTTGAGAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp AATGCCTCCCAGAAACACATTTACAGTCTAAGCAACAGGATCTTCTCAAACCTGCCCCAGGCTCCATCCTaGTTTGCCTCTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NASQKHIYSLSNRIFSNLPQAPS*FASGAG
Trigger: GCCAGCCCCAGAGGCAAAGCAGGATGGAGCCTGGGG...CAGGTTTGAGAAGATCCTGTTGCTTAGACTGTAAATGTGTTTCTGGGAGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATCTGCCTCCTCAGGGGTaGTGTGTTTCAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PLALHTQQTQPALSDFQNLPPQG*CVSGAF
Trigger: GAAAGCCCCTGAAACACAGCACCCCTGAGGAGGCAG...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGGGCATGTCTAGGCGCTaGGGCAGCAAGACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAGMSRR*GSKTCS
Trigger: AGAACAAGTCTTGCTGCCCCAGCGCCTAGACATGCC...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp GAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCTAGGCGCAGAATGCCTTCCAGGTaGGAATCACGGTTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: ESFVAAKQRLSSIGMSRRRMPSR*ESRFWG
Trigger: GCCCCAAAACCGTGATTCTCACCTGGAAGGCATTCT...GCGCCTAGACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGCCTTCCAGGTGAGAATCCAATCCAGGGTTTTGTaGCCAGCTCTTTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: QQTQPALSDFQNAFQVRIQSRVL*PALCPE
Trigger: CTCCGGGCAAAGAGCTGGGCACAAAACCCTGGATTG...GATTCTCACCTGGAAGGCATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp AGTCTCAGATTTCATCTAGGGGTTGCCCTTCTCACTGACTCCAGATGCCAGCCCCAGGTCTTGCTGAGATaGCTGTACTTGGGAGAATTG +
Preference number: 4 (lower is better)
Translates to: SLRFHLGVALLTDSRCQPQVLLR*LYLGEL
Trigger: CAATTCTCCCAAGTACAGGCATCTCAGCAAGACCTG...GGGCTGGCATCTGGAGTCAGTGAGAAGGGCAACCCCTAGATGAAATCTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTAGGGCTGACCCCTGCTaGGTGGGATGCAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AGSLSLKRESANGGGIIIRADPC*VGCKVL
Trigger: CAGGACCTTGCATCCCACCCAGCAGGGGTCAGCCCT...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GAATTTGGAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCTTAAGGAGGCTGATGTaGGCGGCTCCTCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EFGKLCSSQTETQFHRHVLRRLM*AAPPQE
Trigger: CTCCTGGGGAGGAGCCGCCCACATCAGCCTCCTTAA...GACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTCCAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATCCTGCCTTCCTGTCCTaGCACCAAGCACTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: PLALHTQQTQPALSDFQNPAFLS*HQALSH
Trigger: ATGACTGAGTGCTTGGTGCCAGGACAGGAAGGCAGG...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp AATGCCTCCCAGAAACACATTTACAGTCTAAGCAACAGGATCTTCTCAAACCTGGAAGGGCAACAGCATTaGGGGCCAGCCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NASQKHIYSLSNRIFSNLEGQQH*GPAQGG
Trigger: CCCTCCTTGGGCTGGCCCCCAATGCTGTTGCCCTTC...CAGGTTTGAGAAGATCCTGTTGCTTAGACTGTAAATGTGTTTCTGGGAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCTAGGCGCAGGTGTGGTGACTCCTaGAGACTTCTCAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: ESFVAAKQRLSSIGMSRRRCGDS*RLLSHA
Trigger: TGCATGGCTGAGAAGTCTCCAGGAGTCACCACACCT...GCGCCTAGACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp AATGCCTCCCAGAAACACATTTACAGTCTAAGCAACAGGATCTTCTCAAACCTGCTCCTCCCCAGGAGCTaGGAGATCCAAGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: NASQKHIYSLSNRIFSNLLLPRS*EIQAGL
Trigger: GAGTCCAGCTTGGATCTCTCAGCTCCTGGGGAGGAG...CAGGTTTGAGAAGATCCTGTTGCTTAGACTGTAAATGTGTTTCTGGGAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGCCATTGGTGCTCCAATaGGACCACCATAACCATAGG +
Preference number: 4 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAPLVLQ*DHHNHR
Trigger: CCTATGGTTATGGTGGTCTCATTGGAGCACCAATGG...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTCCGTGTCCCTCAGTCTaGGAATGCCCTGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLPCPSV*ECPVSL
Trigger: AAGGGAGACAGGGCATTCTCAGACTGAGGGACACGG...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp ATAGGGTTGGAAACCCACCATCCAGTGCAGAGATTTTCTTTCCAGTTCCTGCTTGTCCTGAGAGAAGTGTaGAGGCATTGGGGACCCACT +
Preference number: 4 (lower is better)
Translates to: IGLETHHPVQRFSFQFLLVLREV*RHWGPT
Trigger: AGTGGGTCCCCAATGCCTGCACACTTCTCTCAGGAC...AAGCAGGAACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTTCCAACCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp GAATTTGGAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCTTGTGCCCAGCTCTTTaGCCGGAGGGACTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EFGKLCSSQTETQFHRHVLCPAL*PEGLLL
Trigger: CAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAA...GACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTCCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp TGTCCACACAAACAGGTCTTGCTGAGATGCCTGTACTTGGGAGAATTGATGCTGTCGATGGTGAGCTCATaGTGGGTGGCTTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: CPHKQVLLRCLYLGELMLSMVSS*WVASSM
Trigger: CATTGAGGAAGCCACCCAGCATGAGCTCACCATCGA...CAGCATCAATTCTCCCAAGTACAGGCATCTCAGCAAGACCTGTTTGTGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp AGTCTCAGATTTCATCTAGGGGTTGCCCTTCTCACTGACTCCAGATGCCAGCCCTTCCTTGCCTTTATCTaGAAACATCCTGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: SLRFHLGVALLTDSRCQPFLAFI*KHPGIP
Trigger: TGGGATCCCAGGATGTTTGCAGATAAAGGCAAGGAA...GGGCTGGCATCTGGAGTCAGTGAGAAGGGCAACCCCTAGATGAAATCTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTGAGACTTCTCAGCCATaGAGTGTGGGTGGACTGGCC +
Preference number: 4 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLETSQP*SVGGLA
Trigger: GGCCAGTCCACCCACACTGCATGGCTGAGAAGTCTC...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGCCTTCCAGGTGAGAATCGAAGTGTGCAGGCATTaGGGACCCACTGAGATAGGA +
Preference number: 4 (lower is better)
Translates to: QQTQPALSDFQNAFQVRIEVCRH*GPTEIG
Trigger: TCCTATCTCAGTGGGTCCCCAATGCCTGCACACTTC...GATTCTCACCTGGAAGGCATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGATGGTGAGCTCATGCTaGGTGGCTTCCTCAATGTTC +
Preference number: 4 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAMVSSC*VASSMF
Trigger: GAACATTGAGGAAGCCACCCAGCATGAGCTCACCAT...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGATGCTCATGGGGCATTaGCCCAACTCTTTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAMLMGH*PNSFLR
Trigger: TCTCAGGAAAGAGTTGGGCCAATGCCCCATGAGCAT...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTGGGTGGACTGGCCTCTaGGTTCCTCTAAGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLGWTGL*VPLSFL
Trigger: AAGGAAGCTTAGAGGAACTCAGAGGCCAGTCCACCC...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp TGTCCACACAAACAGGTCTTGCTGAGATGCCTGTACTTGGGAGAATTGATGCTGACAAACAGGTCTTGCTaGGATGCCTGTACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: CPHKQVLLRCLYLGELMLTNRSC*DACTWE
Trigger: CTCCCAAGTACAGGCATCTCAGCAAGACCTGTTTGT...CAGCATCAATTCTCCCAAGTACAGGCATCTCAGCAAGACCTGTTTGTGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp AGTCTCAGATTTCATCTAGGGGTTGCCCTTCTCACTGACTCCAGATGCCAGCCCCATGGATGGAACATGTaGTGTGCACCATTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SLRFHLGVALLTDSRCQPHGWNM*CAPFVK
Trigger: TTTCACAAATGGTGCACATCACATGTTCCATCCATG...GGGCTGGCATCTGGAGTCAGTGAGAAGGGCAACCCCTAGATGAAATCTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp ATAGGGTTGGAAACCCACCATCCAGTGCAGAGATTTTCTTTCCAGTTCCTGCTTGCATGTCACGGGATATaGTGGCTTAGCTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: IGLETHHPVQRFSFQFLLACHGI*WLSLGS
Trigger: TGAGCCCAAGCTAAGCCATCATATCCCGTGACATGC...AAGCAGGAACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTTCCAACCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CCCTCGCCTAGACATCAGCTCCACAGTCATTTCATCAGTCTGGGATGGGGTTTCGTACATTCTCAAGGGTaGGGAGAATTACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: PSPRHQLHSHFISLGWGFVHSQG*GELQRT
Trigger: GGTTCTTTGTAATTCTCCTCACCCTTGAGAATGTAC...GAAACCCCATCCCAGACTGATGAAATGACTGTGGAGCTGATGTCTAGGCGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTAGCTCTAGAGCACCCTaGCTTCCTGTCCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: AGSLSLKRESANGGGIIISSRAP*LPVLAP
Trigger: TGGTGCCAGGACAGGAAGGCAGGGTGCTCTAGAGCT...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CCCTCCTCTCAAAACCTGGTTCCTCTCCACATAAGGGAAGGGAACATACATCCCATGCCTGAATCACTTTaGATCAAACACAGACCACGG +
Preference number: 4 (lower is better)
Translates to: PSSQNLVPLHIREGNIHPMPESL*IKHRPR
Trigger: CCGTGGTCTGTGTTTGATGCAAAGTGATTCAGGCAT...GGGATGTATGTTCCCTTCCCTTATGTGGAGAGGAACCAGGTTTTGAGAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp AGTCTCAGATTTCATCTAGGGGTTGCCCTTCTCACTGACTCCAGATGCCAGCCCTTGTGGATCTTCAGTTaGTTCAGGCTATCTGATGTG +
Preference number: 4 (lower is better)
Translates to: SLRFHLGVALLTDSRCQPLWIFS*FRLSDV
Trigger: CACATCAGATAGCCTGAAGCAACTGAAGATCCACAA...GGGCTGGCATCTGGAGTCAGTGAGAAGGGCAACCCCTAGATGAAATCTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTCTGAGAGATCCAAGCTaGACTCCTTGGAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLLRDPS*TPWRPR
Trigger: TCTGGGCCTCCAAGGAGTCCAGCTTGGATCTCTCAG...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGCCTTCCAGGTGAGAATCTTACCTTCGTATTATTaGTCACCTGGGTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: QQTQPALSDFQNAFQVRILPSYY*SPGWDP
Trigger: AGGGTCCCACCCAGGTGATCAATAATACGAAGGTAA...GATTCTCACCTGGAAGGCATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp ATAGGGTTGGAAACCCACCATCCAGTGCAGAGATTTTCTTTCCAGTTCCTGCTTCTGCTGTCTCAAATATaGTCATGGGGCATTGGCCCA +
Preference number: 4 (lower is better)
Translates to: IGLETHHPVQRFSFQFLLLLSQI*SWGIGP
Trigger: TGGGCCAATGCCCCATGAGCATATTTGAGACAGCAG...AAGCAGGAACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTTCCAACCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CCCTCGCCTAGACATCAGCTCCACAGTCATTTCATCAGTCTGGGATGGGGTTTCTATCTGATGTGTATGTaGATGTCACGGGATATGATG +
Preference number: 4 (lower is better)
Translates to: PSPRHQLHSHFISLGWGFYLMCM*MSRDMM
Trigger: CATCATATCCCGTGACATGCACATACACATCAGATA...GAAACCCCATCCCAGACTGATGAAATGACTGTGGAGCTGATGTCTAGGCGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGTCTCAAATATGCTCATaGGGCATTGGCCCAACTCTT +
Preference number: 4 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAASQICS*GIGPTL
Trigger: AAGAGTTGGGCCAATGCCCCATGAGCATATTTGAGA...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTGCAGTGTGGGTGGACTaGCCTCTGAGTTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: AGSLSLKRESANGGGIIIAVWVD*PLSSSK
Trigger: CTTAGAGGAACTCAGAGGCCAGTCCACCCACACTGC...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp AATGCCTCCCAGAAACACATTTACAGTCTAAGCAACAGGATCTTCTCAAACCTGAGTCATCTTCGATGGTaGGCTCATGCTGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: NASQKHIYSLSNRIFSNLSHLRW*AHAGWL
Trigger: AAGCCACCCAGCATGAGCTCACCATCGAAGATGACT...CAGGTTTGAGAAGATCCTGTTGCTTAGACTGTAAATGTGTTTCTGGGAGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTACCTGCCACCTCTGCTaGCCCTCATCAATGTCAATG +
Preference number: 4 (lower is better)
Translates to: AGSLSLKRESANGGGIIITCHLC*PSSMSM
Trigger: CATTGACATTGATGAGGGTCAGCAGAGGTGGCAGGT...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGTCTTTTAAGCCAGTCTaGGCCTATGTTTTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAASFKPV*AYVLSQ
Trigger: CTGGCTTAAAACATAGGCTCAGACTGGCTTAAAAGA...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CCCTCGCCTAGACATCAGCTCCACAGTCATTTCATCAGTCTGGGATGGGGTTTCGAAGAACCCAATTATTaGTCAGGAATATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: PSPRHQLHSHFISLGWGFEEPNY*SGIFST
Trigger: GGTGGAAAATATTCCTGATCAATAATTGGGTTCTTC...GAAACCCCATCCCAGACTGATGAAATGACTGTGGAGCTGATGTCTAGGCGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CCCTCGCCTAGACATCAGCTCCACAGTCATTTCATCAGTCTGGGATGGGGTTTCATGCTTACCTCTAAGTaGGCATTGTTGGTGTTATTA +
Preference number: 4 (lower is better)
Translates to: PSPRHQLHSHFISLGWGFMLTSK*ALLVLL
Trigger: TAATAACACCAACAATGCTCACTTAGAGGTAAGCAT...GAAACCCCATCCCAGACTGATGAAATGACTGTGGAGCTGATGTCTAGGCGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp AGTCTCAGATTTCATCTAGGGGTTGCCCTTCTCACTGACTCCAGATGCCAGCCCGGTTCGCATACACAGTaGGAGTTAAGATCTATTTTA +
Preference number: 4 (lower is better)
Translates to: SLRFHLGVALLTDSRCQPGSHTQ*ELRSIL
Trigger: TAAAATAGATCTTAACTCTCACTGTGTATGCGAACC...GGGCTGGCATCTGGAGTCAGTGAGAAGGGCAACCCCTAGATGAAATCTGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGGATTACAAAATACATTaGTCAGTTAGGGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAADYKIH*SVRVGQ
Trigger: CTGCCCCACCCTAACTGATCAATGTATTTTGTAATC...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp ATAGGGTTGGAAACCCACCATCCAGTGCAGAGATTTTCTTTCCAGTTCCTGCTTTTCATCAGTCTGGGATaGGGTTTCCTCATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: IGLETHHPVQRFSFQFLLFISLG*GFLMCQ
Trigger: CTGACACATGAGGAAACCCCATCCCAGACTGATGAA...AAGCAGGAACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTTCCAACCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CAA 72 bp CATTGGTGCTCCAATGAGACCACCATAACCATAGGGTaGGAAACCCACCATCCAGTGCAGAGATTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HWCSNETTITIG*ETHHPVQRFSF
Trigger: GAAAGAAAATCTCTGCACTGGATGGTGGGTTTCCAACCCTATGGTTATGGTGGTCTCATTGGAGCACCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATTCAGGCCTTCAATCCTaGTGTCTCAAATATGCTCAT +
Preference number: 4 (lower is better)
Translates to: PLALHTQQTQPALSDFQNSGLQS*CLKYAH
Trigger: ATGAGCATATTTGAGACAGCAGGATTGAAGGCCTGA...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CTAGACATCAGCTCCACAGTCATTTCATCAGTCTGGGATGGGGTTTCCTCATGTAAACCCACCATCCAGTaGAGAGATTTTCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LDISSTVISSVWDGVSSCKPTIQ*RDFLSS
Trigger: ACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTT...ACATGAGGAAACCCCATCCCAGACTGATGAAATGACTGTGGAGCTGATGTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp TGTCCACACAAACAGGTCTTGCTGAGATGCCTGTACTTGGGAGAATTGATGCTGATTTTCCACCCACCCTaGAGATCTAAACTTTTCACC +
Preference number: 4 (lower is better)
Translates to: CPHKQVLLRCLYLGELMLIFHPP*RSKLFT
Trigger: GGTGAAAAGTTTAGATCTGCAGGGTGGGTGGAAAAT...CAGCATCAATTCTCCCAAGTACAGGCATCTCAGCAAGACCTGTTTGTGTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp AATGCCTCCCAGAAACACATTTACAGTCTAAGCAACAGGATCTTCTCAAACCTGTACATCCCTCACCATTaGTGCTCCAATGAGACCACC +
Preference number: 4 (lower is better)
Translates to: NASQKHIYSLSNRIFSNLYIPHH*CSNETT
Trigger: GGTGGTCTCATTGGAGCACCAATGGTGAGGGATGTA...CAGGTTTGAGAAGATCCTGTTGCTTAGACTGTAAATGTGTTTCTGGGAGGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GAATTTGGAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCTGGGATCCCACAGTCTaGTTTCTCCTACAGCCTATT +
Preference number: 4 (lower is better)
Translates to: EFGKLCSSQTETQFHRHVWDPTV*FLLQPI
Trigger: AATAGGCTGTAGGAGAAACCAGACTGTGGGATCCCA...GACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTCCAAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CAA 72 bp GGCTGTTTATTTCACCTGGGTGCAGGCAGTCTGAGTTaGAAAAGAGAATCAGCAAATGGTGGTGGGATTATC +
Preference number: 4 (lower is better)
Translates to: GCLFHLGAGSLS*KRESANGGGII
Trigger: GATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGCACCCAGGTGAAATAAACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp AATGCCTCCCAGAAACACATTTACAGTCTAAGCAACAGGATCTTCTCAAACCTGATCCCTCACCATTGGTaGTCCAATGAGACCACCATA +
Preference number: 4 (lower is better)
Translates to: NASQKHIYSLSNRIFSNLIPHHW*SNETTI
Trigger: TATGGTGGTCTCATTGGAGCACCAATGGTGAGGGAT...CAGGTTTGAGAAGATCCTGTTGCTTAGACTGTAAATGTGTTTCTGGGAGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp CAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGCCTTCCAGGTGAGAATCATTGATCAGTTAGGGTaGGGCAGAAACAAATCACAA +
Preference number: 4 (lower is better)
Translates to: QQTQPALSDFQNAFQVRIIDQLG*GRNKSQ
Trigger: TTGTGATTTGTTTCTGCCCCACCCTAACTGATCAAT...GATTCTCACCTGGAAGGCATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGGTGCCTATGGATAACTaGATATACTCCAAATATGTA +
Preference number: 4 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAAVPMDN*IYSKYV
Trigger: TACATATTTGGAGTATATGCAGTTATCCATAGGCAC...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATATGGAACATGTGATGTaGACCATTTGTGAAATCCAA +
Preference number: 4 (lower is better)
Translates to: PLALHTQQTQPALSDFQNMEHVM*TICEIQ
Trigger: TTGGATTTCACAAATGGTGCACATCACATGTTCCAT...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCAAGGAGGGCACCATGTaGACGATGAAGCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFKEGTM*TMKPAQ
Trigger: TTGGGCTGGCTTCATCGTCCACATGGTGCCCTCCTT...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTGTAGGTATCTTCCCATaGATGGAACATGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: AGSLSLKRESANGGGIIIVGIFP*MEHVMC
Trigger: GCACATCACATGTTCCATCCATGGGAAGATACCTAC...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp GAATTTGGAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCGATGTGCACCATTTGTaGAATCCAAGAGATTGCATT +
Preference number: 4 (lower is better)
Translates to: EFGKLCSSQTETQFHRHVDVHHL*NPRDCI
Trigger: AATGCAATCTCTTGGATTTCACAAATGGTGCACATC...GACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTCCAAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp ATAGGGTTGGAAACCCACCATCCAGTGCAGAGATTTTCTTTCCAGTTCCTGCTTCTGCAAGTTACATTATaGTTACCTCTAAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: IGLETHHPVQRFSFQFLLLQVTL*LPLSEH
Trigger: ATGCTCACTTAGAGGTAAGCATAATGTAACTTGCAG...AAGCAGGAACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTTCCAACCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTAGTGTAGGACTAGGCTaGAAATGTGTGCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLSVGLG*KCVHSF
Trigger: AAAAGAATGCACACATTTCCAGCCTAGTCCTACACT...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR GCA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTTCAAGTTACACACCATaGAGAGCCTTGTCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: AGSLSLKRESANGGGIIISSYTP*RALSSL
Trigger: TAAAGAAGACAAGGCTCTGCATGGTGTGTAACTTGA...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp AATGCCTCCCAGAAACACATTTACAGTCTAAGCAACAGGATCTTCTCAAACCTGTTTCTGCAAAATACATaGGTTCGCATACACAGTGAG +
Preference number: 4 (lower is better)
Translates to: NASQKHIYSLSNRIFSNLFLQNT*VRIHSE
Trigger: CTCACTGTGTATGCGAACCCATGTATTTTGCAGAAA...CAGGTTTGAGAAGATCCTGTTGCTTAGACTGTAAATGTGTTTCTGGGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTGTGAAAACATTCTTCTaGGTGCTGATAATTCCCAAT +
Preference number: 4 (lower is better)
Translates to: AGSLSLKRESANGGGIIIVKTFF*VLIIPN
Trigger: ATTGGGAATTATCAGCACTCAGAAGAATGTTTTCAC...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR TCA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCGACTTTGGGTTAAACTaGAGCTACCTGGACATCTCT +
Preference number: 4 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFDFGLN*SYLDIS
Trigger: AGAGATGTCCAGGTAGCTTCAGTTTAACCCAAAGTC...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CCA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCGTCATTTCATCAGTCTaGGATGGGGTTTCCTCATGT +
Preference number: 4 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFVISSV*DGVSSC
Trigger: ACATGAGGAAACCCCATCCCAGACTGATGAAATGAC...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636578.2
3UTR CAA 72 bp GTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTaGTGGATCTTCAGTTGCTTCAGGCTATCTGATGTG +
Preference number: 4 (lower is better)
Translates to: VECHQLRLFSLL*WIFSCFRLSDV
Trigger: CACATCAGATAGCCTGAAGCAACTGAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp GCCCGGAGGGACTCTTGCTGCTGCTGCTGCTGCTGCCGCTGCCGCTaGCGCTGGGTTAAGGAGGCTGATGTGGGCGGCTCCTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ARRDSCCCCCCCRCR*RWVKEADVGGSSPG
Trigger: TCCTGGGGAGGAGCCGCCCACATCAGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp CTCTTTGCCCGGAGGGACTCTTGCTGCTGCTGCTGCTGCTGCCGCTaGCGCTGCCGCTGGGTTAAGGAGGCTGATGTGGGCGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LFARRDSCCCCCCCR*RCRWVKEADVGGSS
Trigger: GGAGGAGCCGCCCACATCAGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS CCA 90 bp AGGGACTCTTGCTGCTGCTGCTGCTGCTGCCGCTGCCGCTGCCGCTaGGTTAAGGAGGCTGATGTGGGCGGCTCCTCCCCAGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RDSCCCCCCCRCRCR*VKEADVGGSSPGAE
Trigger: CTCAGCTCCTGGGGAGGAGCCGCCCACATCAGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp TGTGCCCAGCTCTTTGCCCGGAGGGACTCTTGCTGCTGCTGCTGCTaGTGCCGCTGCCGCTGCCGCTGGGTTAAGGAGGCTGATGTGGGC +
Preference number: 5 (lower is better)
Translates to: CAQLFARRDSCCCCC*CRCRCRWVKEADVG
Trigger: GCCCACATCAGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp CCAGGGTTTTGTGCCCAGCTCTTTGCCCGGAGGGACTCTTGCTGCTaGTGCTGCTGCTGCCGCTGCCGCTGCCGCTGGGTTAAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PGFCAQLFARRDSCC*CCCCRCRCRWVKEA
Trigger: AGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAAACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS CCA 90 bp GTGTGCAGGCATTGGGGACCCACTGAGATAGGAGGCACCTCCCGATaGCCTTGGGCTCCAACCCAGGGCTGCCTCCTCAGGGGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: VCRHWGPTEIGGTSR*PWAPTQGCLLRGAV
Trigger: CACAGCACCCCTGAGGAGGCAGCCCTGGGTTGGAGCCCAAGGCCATCGGGAGGTGCCTCCTATCTCAGTGGGTCCCCAATGCCTGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp GGGTTTTGTGCCCAGCTCTTTGCCCGGAGGGACTCTTGCTGCTGCTaGTGCTGCTGCCGCTGCCGCTGCCGCTGGGTTAAGGAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: GFCAQLFARRDSCCC*CCCRCRCRWVKEAD
Trigger: ATCAGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp GGCAATCCAGGGTTTTGTGCCCAGCTCTTTGCCCGGAGGGACTCTTaGTGCTGCTGCTGCTGCTGCCGCTGCCGCTGCCGCTGGGTTAAG +
Preference number: 5 (lower is better)
Translates to: GNPGFCAQLFARRDS*CCCCCCRCRCRWVK
Trigger: CTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAAACCCTGGATTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp GAGATAGGAGGCACCTCCCGATGGCCTTGGGCTCCAACCCAGGGCTaGCTCCTCAGGGGTGCTGTGTTTCAGGGGCTTTCTCAAGGTGGG +
Preference number: 5 (lower is better)
Translates to: EIGGTSRWPWAPTQG*LLRGAVFQGLSQGG
Trigger: CCCACCTTGAGAAAGCCCCTGAAACACAGCACCCCTGAGGAGGCAGCCCTGGGTTGGAGCCCAAGGCCATCGGGAGGTGCCTCCTATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp TTTTGTGCCCAGCTCTTTGCCCGGAGGGACTCTTGCTGCTGCTGCTaGTGCTGCCGCTGCCGCTGCCGCTGGGTTAAGGAGGCTGATGTG +
Preference number: 5 (lower is better)
Translates to: FCAQLFARRDSCCCC*CCRCRCRWVKEADV
Trigger: CACATCAGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp AATCCAGGGTTTTGTGCCCAGCTCTTTGCCCGGAGGGACTCTTGCTaGTGCTGCTGCTGCTGCCGCTGCCGCTGCCGCTGGGTTAAGGAG +
Preference number: 5 (lower is better)
Translates to: NPGFCAQLFARRDSC*CCCCCRCRCRWVKE
Trigger: CTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAAACCCTGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS CCA 90 bp AGGCATTGGGGACCCACTGAGATAGGAGGCACCTCCCGATGGCCTTaGGCTCCAACCCAGGGCTGCCTCCTCAGGGGTGCTGTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: RHWGPTEIGGTSRWP*APTQGCLLRGAVFQ
Trigger: CTGAAACACAGCACCCCTGAGGAGGCAGCCCTGGGTTGGAGCCCAAGGCCATCGGGAGGTGCCTCCTATCTCAGTGGGTCCCCAATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp AGGGCTGACCCCTGCTGGGTGGGATGCAAGGTCCTGAGAGAAGTGTaGAGGCATTGGGGACCCACTGAGATAGGAGGCACCTCCCGATGG +
Preference number: 5 (lower is better)
Translates to: RADPCWVGCKVLREV*RHWGPTEIGGTSRW
Trigger: CCATCGGGAGGTGCCTCCTATCTCAGTGGGTCCCCAATGCCTGCACACTTCTCTCAGGACCTTGCATCCCACCCAGCAGGGGTCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp TGTGTTCAGGATCCCAGGCAATCCAGGGTTTTGTGCCCAGCTCTTTaGCCGGAGGGACTCTTGCTGCTGCTGCTGCTGCTGCCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: CVQDPRQSRVLCPAL*PEGLLLLLLLLPLP
Trigger: CGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAAACCCTGGATTGCCTGGGATCCTGAACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp CCCTCCTCTCAAAACCTGGTTCCTCTCCACATAAGGGAAGGGAACATACATCCCCACCTCCCGATGGCCTaGGGCTCCAACCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PSSQNLVPLHIREGNIHPHLPMA*GSNPGL
Trigger: CAGCCCTGGGTTGGAGCCCAAGGCCATCGGGAGGTG...GGGATGTATGTTCCCTTCCCTTATGTGGAGAGGAACCAGGTTTTGAGAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp TCCTGGGATCCCACAGTCTGGTTTCTCCTACAGCCTATTGAGGAAGGAGGTAGGAGAAGGGCAACAGCATaGGGGGCCAGCCCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: SWDPTVWFLLQPIEEGGRRRATA*GASPRR
Trigger: CCTCCTTGGGCTGGCCCCCAATGCTGTTGCCCTTCT...CCTACCTCCTTCCTCAATAGGCTGTAGGAGAAACCAGACTGTGGGATCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 90 bp AGTAGAAAGCCTCCTTTTCCTAACAGTGGCTGGAGGGCTGACCCCTaGTGGGTGGGATGCAAGGTCCTGAGAGAAGTGTGCAGGCATTGG +
Preference number: 5 (lower is better)
Translates to: SRKPPFPNSGWRADP*WVGCKVLREVCRHW
Trigger: CCAATGCCTGCACACTTCTCTCAGGACCTTGCATCCCACCCAGCAGGGGTCAGCCCTCCAGCCACTGTTAGGAAAAGGAGGCTTTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp GAAAGCTTTGTAGCAGCCAAACAGAGACTCAGTTCCATAGGCATGTCTAGGCGCCTTCCAAGTGGGCAGTaGCAGCGCCCACCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: ESFVAAKQRLSSIGMSRRLPSGQ*QRPPCG
Trigger: GCCACAGGGTGGGCGCTGCAACTGCCCACTTGGAAG...GCGCCTAGACATGCCTATGGAACTGAGTCTCTGTTTGGCTGCTACAAAGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS TCA 90 bp CCTGCCTTCCTGTCCTGGCACCAAGCACTCAGTCATCTTCGATGGTaGGCTCATGCTGGGTGGCTTCCTCAATGTTCTGAAGCACGTAGA +
Preference number: 5 (lower is better)
Translates to: PAFLSWHQALSHLRW*AHAGWLPQCSEARR
Trigger: TCTACGTGCTTCAGAACATTGAGGAAGCCACCCAGCATGAGCTCACCATCGAAGATGACTGAGTGCTTGGTGCCAGGACAGGAAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp TCCTGGGATCCCACAGTCTGGTTTCTCCTACAGCCTATTGAGGAAGGAGGTAGGGTCTCTTCCTCCCTGTaGTGTTCAGGATCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SWDPTVWFLLQPIEEGGRVSSSL*CSGSQA
Trigger: TGCCTGGGATCCTGAACACAACAGGGAGGAAGAGAC...CCTACCTCCTTCCTCAATAGGCTGTAGGAGAAACCAGACTGTGGGATCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp CCTCTAGCCCTACACACTCAACAAACACAGCCAGCACTCTCAGATTTCCAGAATGCAGGGAGCACAGCGTaGGAGAGTGTAGGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: PLALHTQQTQPALSDFQNAGSTA*ESVGGW
Trigger: CCAACCCCCTACACTCTCCAACGCTGTGCTCCCTGC...ATTCTGGAAATCTGAGAGTGCTGGCTGTGTTTGTTGAGTGTGTAGGGCTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp CTTACAGGTTTTGGGATAGGCGGTAGAGTTAGGAGCAATGTTTTGTGGGCAGCGTCCAAGCTGGACTCCTaGGAGGCCCAGAGAGTAGAA +
Preference number: 5 (lower is better)
Translates to: LTGFGIGGRVRSNVLWAASKLDS*EAQRVE
Trigger: TTCTACTCTCTGGGCCTCCAAGGAGTCCAGCTTGGA...CGCTGCCCACAAAACATTGCTCCTAACTCTACCGCCTATCCCAAAACCTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp TCCTGGGATCCCACAGTCTGGTTTCTCCTACAGCCTATTGAGGAAGGAGGTAGGCCTGTCCCCAAGAATTaGGAAAGCTTTGTAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SWDPTVWFLLQPIEEGGRPVPKN*ESFVAA
Trigger: GGCTGCTACAAAGCTTTCCAAATTCTTGGGGACAGG...CCTACCTCCTTCCTCAATAGGCTGTAGGAGAAACCAGACTGTGGGATCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp ATAGGGTTGGAAACCCACCATCCAGTGCAGAGATTTTCTTTCCAGTTCCTGCTTTTTGTGCCCAGCTCTTaGCCCGGAGGGACTCTTGCT +
Preference number: 5 (lower is better)
Translates to: IGLETHHPVQRFSFQFLLFVPSS*PGGTLA
Trigger: AGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAA...AAGCAGGAACTGGAAAGAAAATCTCTGCACTGGATGGTGGGTTTCCAACCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp TTGGCCCAACTCTTTCCTGAGAAGGCTGAGTGGCTACGGCCGCCCTCGCCTAGACCAAGAGATTGCATTTaGAACACTTTAACTAGAGTG +
Preference number: 5 (lower is better)
Translates to: LAQLFPEKAEWLRPPSPRPRDCI*NTLTRV
Trigger: CACTCTAGTTAAAGTGTTCAAAATGCAATCTCTTGG...TCTAGGCGAGGGCGGCCGTAGCCACTCAGCCTTCTCAGGAAAGAGTTGGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTCACCTGTCCGCACACTaGAAGGGAGGCAGTGTAGGA +
Preference number: 5 (lower is better)
Translates to: AGSLSLKRESANGGGIIIHLSAH*KGGSVG
Trigger: TCCTACACTGCCTCCCTTCAAGTGTGCGGACAGGTG...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTACCATAACCATAGGGTaGGAAACCCACCATCCAGTG +
Preference number: 5 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLTITIG*ETHHPV
Trigger: CACTGGATGGTGGGTTTCCAACCCTATGGTTATGGT...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp TCCTGGGATCCCACAGTCTGGTTTCTCCTACAGCCTATTGAGGAAGGAGGTAGGGGAAGAACCCAATTATaGATCAGGAATATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: SWDPTVWFLLQPIEEGGRGRTQL*IRNIFH
Trigger: GTGGAAAATATTCCTGATCAATAATTGGGTTCTTCC...CCTACCTCCTTCCTCAATAGGCTGTAGGAGAAACCAGACTGTGGGATCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTGGAGAGTGTAGGGGGTaGGCCCATGTAACTGTTAAA +
Preference number: 5 (lower is better)
Translates to: AGSLSLKRESANGGGIIIGECRG*AHVTVK
Trigger: TTTAACAGTTACATGGGCCAACCCCCTACACTCTCC...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTCCACACAAACAGGTCTaGCTGAGATGCCTGTACTTG +
Preference number: 5 (lower is better)
Translates to: AGSLSLKRESANGGGIIIPHKQV*LRCLYL
Trigger: CAAGTACAGGCATCTCAGCAAGACCTGTTTGTGTGG...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp ACAATGGTAGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCAGGCAATCCAGGGTTTaGTGCCCAGCTCTTTGCCCG +
Preference number: 5 (lower is better)
Translates to: TMVECHQLRLFSLLLWIFRQSRV*CPALCP
Trigger: CGGGCAAAGAGCTGGGCACAAAACCCTGGATTGCCT...GAAGATCCACAAAAGAAGTGAAAATAGCCTTAACTGATGACATTCTACCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp GCAGGCAGTCTGAGTTTGAAAAGAGAATCAGCAAATGGTGGTGGGATTATCATTATTACCTTCGTATTATaGATCACCTGGGTGGGACCC +
Preference number: 5 (lower is better)
Translates to: AGSLSLKRESANGGGIIIITFVL*ITWVGP
Trigger: GGGTCCCACCCAGGTGATCAATAATACGAAGGTAAT...AATGATAATCCCACCACCATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp AATGCCTCCCAGAAACACATTTACAGTCTAAGCAACAGGATCTTCTCAAACCTGCTGAGATGCCTGTACTaGGGAGAATTGATGCTGACT +
Preference number: 5 (lower is better)
Translates to: NASQKHIYSLSNRIFSNLLRCLY*GELMLT
Trigger: AGTCAGCATCAATTCTCCCAAGTACAGGCATCTCAG...CAGGTTTGAGAAGATCCTGTTGCTTAGACTGTAAATGTGTTTCTGGGAGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTGCAGGCAGTCTGAGTTaGAAAAGAGAATCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLAGSLS*KRESAN
Trigger: ATTTGCTGATTCTCTTTTCAAACTCAGACTGCCTGC...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS-3UTR CAA 90 bp GTCTCCCTTTCTAAGTTTCTCATCGTCTCCTGTCCCCAAGAATTTGGAAAGCTTGAATCTCATTCTCTGTaGGAAACCTCCAAAGAAATG +
Preference number: 5 (lower is better)
Translates to: VSLSKFLIVSCPQEFGKLESHSL*ETSKEM
Trigger: CATTTCTTTGGAGGTTTCCAACAGAGAATGAGATTC...AAGCTTTCCAAATTCTTGGGGACAGGAGACGATGAGAAACTTAGAAAGGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS CCA 72 bp TGCTGCTGCTGCTGCTGCTGCCGCTGCCGCTGCCGCTaGGTTAAGGAGGCTGATGTGGGCGGCTCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: CCCCCCCRCRCR*VKEADVGGSSP
Trigger: TGGGGAGGAGCCGCCCACATCAGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 72 bp GACTCTTGCTGCTGCTGCTGCTGCTGCCGCTGCCGCTaGCGCTGGGTTAAGGAGGCTGATGTGGGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: DSCCCCCCCRCR*RWVKEADVGGS
Trigger: GGAGCCGCCCACATCAGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 72 bp CGGAGGGACTCTTGCTGCTGCTGCTGCTGCTGCCGCTaGCGCTGCCGCTGGGTTAAGGAGGCTGATGTGGGC +
Preference number: 6 (lower is better)
Translates to: RRDSCCCCCCCR*RCRWVKEADVG
Trigger: GCCCACATCAGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 72 bp GCCCAGCTCTTTGCCCGGAGGGACTCTTGCTGCTGCTaGTGCTGCTGCCGCTGCCGCTGCCGCTGGGTTAAG +
Preference number: 6 (lower is better)
Translates to: AQLFARRDSCCC*CCCRCRCRWVK
Trigger: CTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 72 bp TGTGCCCAGCTCTTTGCCCGGAGGGACTCTTGCTGCTaGTGCTGCTGCTGCCGCTGCCGCTGCCGCTGGGTT +
Preference number: 6 (lower is better)
Translates to: CAQLFARRDSCC*CCCCRCRCRWV
Trigger: AACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 72 bp GGGTTTTGTGCCCAGCTCTTTGCCCGGAGGGACTCTTaGTGCTGCTGCTGCTGCTGCCGCTGCCGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: GFCAQLFARRDS*CCCCCCRCRCR
Trigger: GCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 72 bp CTCTTTGCCCGGAGGGACTCTTGCTGCTGCTGCTGCTaGTGCCGCTGCCGCTGCCGCTGGGTTAAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: LFARRDSCCCCC*CRCRCRWVKEA
Trigger: AGCCTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 72 bp CAGCTCTTTGCCCGGAGGGACTCTTGCTGCTGCTGCTaGTGCTGCCGCTGCCGCTGCCGCTGGGTTAAGGAG +
Preference number: 6 (lower is better)
Translates to: QLFARRDSCCCC*CCRCRCRWVKE
Trigger: CTCCTTAACCCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 72 bp TTTTGTGCCCAGCTCTTTGCCCGGAGGGACTCTTGCTaGTGCTGCTGCTGCTGCCGCTGCCGCTGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: FCAQLFARRDSC*CCCCCRCRCRW
Trigger: CCAGCGGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS CCA 72 bp GGACCCACTGAGATAGGAGGCACCTCCCGATGGCCTTaGGCTCCAACCCAGGGCTGCCTCCTCAGGGGTGCT +
Preference number: 6 (lower is better)
Translates to: GPTEIGGTSRWP*APTQGCLLRGA
Trigger: AGCACCCCTGAGGAGGCAGCCCTGGGTTGGAGCCCAAGGCCATCGGGAGGTGCCTCCTATCTCAGTGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 72 bp GGCACCTCCCGATGGCCTTGGGCTCCAACCCAGGGCTaGCTCCTCAGGGGTGCTGTGTTTCAGGGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: GTSRWPWAPTQG*LLRGAVFQGLS
Trigger: AGAAAGCCCCTGAAACACAGCACCCCTGAGGAGGCAGCCCTGGGTTGGAGCCCAAGGCCATCGGGAGGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS CCA 72 bp CATTGGGGACCCACTGAGATAGGAGGCACCTCCCGATaGCCTTGGGCTCCAACCCAGGGCTGCCTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: HWGPTEIGGTSR*PWAPTQGCLLR
Trigger: CCTGAGGAGGCAGCCCTGGGTTGGAGCCCAAGGCCATCGGGAGGTGCCTCCTATCTCAGTGGGTCCCCAATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS GCA 72 bp GATCCCAGGCAATCCAGGGTTTTGTGCCCAGCTCTTTaGCCGGAGGGACTCTTGCTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: DPRQSRVLCPAL*PEGLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAAACCCTGGATTGCCTGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS CCA 72 bp CCTTTTCCTAACAGTGGCTGGAGGGCTGACCCCTGCTaGGTGGGATGCAAGGTCCTGAGAGAAGTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: PFPNSGWRADPC*VGCKVLREVCR
Trigger: CCTGCACACTTCTCTCAGGACCTTGCATCCCACCCAGCAGGGGTCAGCCCTCCAGCCACTGTTAGGAAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636578.2
CDS TCA 72 bp CTGTCCTGGCACCAAGCACTCAGTCATCTTCGATGGTaGGCTCATGCTGGGTGGCTTCCTCAATGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: LSWHQALSHLRW*AHAGWLPQCSE
Trigger: TTCAGAACATTGAGGAAGCCACCCAGCATGAGCTCACCATCGAAGATGACTGAGTGCTTGGTGCCAGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636578.2