RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC196 (Homo sapiens)

Ensembl gene IDs: ENSG00000196553

Ensembl transcript IDs: ENST00000359454.10, ENST00000389594.7, ENST00000411796.6, ENST00000432289.5, ENST00000450299.6, ENST00000636229.1, ENST00000641281.1, ENST00000641536.1, ENST00000641713.1, ENST00000641761.1, ENST00000641812.1

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTaGATGTGGTTGGTGCCACCTACTGGGCTTGGGACCCAGGAAGAT +
Preference number: 1 (lower is better)
Translates to: QHFMVPELPLCGLEA*MWLVPPTGLGTQED
Trigger: ATCTTCCTGGGTCCCAAGCCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR CCA 90 bp CAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTaGATGTGGTTGGTGCCACCTACTGGGCATATAGATCCCTTGAGA +
Preference number: 1 (lower is better)
Translates to: QHFMVPELPLCGLEA*MWLVPPTGHIDPLR
Trigger: TCTCAAGGGATCTATATGCCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641812.1
3UTR CCA 90 bp TTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTaGTTGGTGCCACCTACTGGGCTTGGGACCCAGGAAGATTTAAAA +
Preference number: 1 (lower is better)
Translates to: FMVPELPLCGLEAWM*LVPPTGLGTQEDLK
Trigger: TTTTAAATCTTCCTGGGTCCCAAGCCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR CAA 90 bp CTCTCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTaGAAGCCTGGATGTGGTTGGTGCCACCTACTGGGCTTGGGACCC +
Preference number: 2 (lower is better)
Translates to: LSHSISWFLNYHSVD*KPGCGWCHLLGLGP
Trigger: GGGTCCCAAGCCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR-3UTR GCA 90 bp AAATCTGTCCAAAGCAAATGGAGCGAAAGCCTGCTAATTCTTCAGTGCTTCATCCCTGGATGTGGTTGGTaGCACCTACTGGGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: KSVQSKWSESLLILQCFIPGCGW*HLLGLG
Trigger: TCCCAAGCCCAGTAGGTGGCACCAACCACATCCAGG...GATGAAGCACTGAAGAATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR-3UTR CCA 90 bp ATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGGTTGGTGCCACCTACTaGGCTTGGGACCCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: IKLTSFSSLLFCVDLCSQVGATY*AWDPGR
Trigger: TCTTCCTGGGTCCCAAGCCCAGTAGGTGGCACCAAC...CTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR-3UTR CCA 90 bp ATAGTTGTAATGCCCATAGTACATCCAACGTTCAGGTTTTTCTCAGAAGAGCTCCTTGAAGCCTGGATGTaGTTGGTGCCACCTACTGGG +
Preference number: 2 (lower is better)
Translates to: IVVMPIVHPTFRFFSEELLEAWM*LVPPTG
Trigger: CCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAG...GAGCTCTTCTGAGAAAAACCTGAACGTTGGATGTACTATGGGCATTACAACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641812.1
3UTR-3UTR CCA 90 bp AGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCATGTGGACTTGAAGCCTaGATGTGGTTGGTGCCACCT +
Preference number: 2 (lower is better)
Translates to: RVIEDRSLPQHFMVPELPCGLEA*MWLVPP
Trigger: AGGTGGCACCAACCACATCCAGGCTTCAAGTCCACA...TGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641812.1
3UTR-3UTR CCA 90 bp ATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGTGTGGACTTGAAGCCTaGATGTGGTTGGTGCCACCT +
Preference number: 2 (lower is better)
Translates to: IKLTSFSSLLFCVDLCSQCGLEA*MWLVPP
Trigger: AGGTGGCACCAACCACATCCAGGCTTCAAGTCCACA...CTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641812.1
3UTR-3UTR CCA 90 bp ATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGGTTGGTGCCACCTACTaGGCATATAGATCCCTTGAG +
Preference number: 2 (lower is better)
Translates to: IKLTSFSSLLFCVDLCSQVGATY*AYRSLE
Trigger: CTCAAGGGATCTATATGCCCAGTAGGTGGCACCAAC...CTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641812.1
3UTR-3UTR CCA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATGCCACCTACTGGGCTTaGGACCCAGGAAGATTTAAA +
Preference number: 2 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDATYWA*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGCCCAGTAGGTGGC...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR-3UTR CCA 90 bp TCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGAATAATTTCAGGTCATTaGCCTTCTGGTAGTTCTTCA +
Preference number: 2 (lower is better)
Translates to: SHSISWFLNYHSVDLKPGIISGH*PSGSSS
Trigger: TGAAGAACTACCAGAAGGCCAATGACCTGAAATTAT...TCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR-3UTR CCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCGCTCAAGGAAATGCTTaGGACCCAGGAAGATTTAAA +
Preference number: 2 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESAQGNA*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGCATTTCCTTGAGC...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359454.10
3UTR CAA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTaGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTC +
Preference number: 2 (lower is better)
Translates to: ESPSCIIKLTSFSSL*FCVDLCSQNSHMVF
Trigger: GAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR-3UTR TCA 90 bp ATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGATAGATCCCTTGAGATaGCCTTCAGCTAATTTTGAA +
Preference number: 2 (lower is better)
Translates to: ISWFLNYHSVDLKPGCGWIDPLR*PSANFE
Trigger: TTCAAAATTAGCTGAAGGTCATCTCAAGGGATCTAT...CCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641812.1
3UTR-3UTR GCA 90 bp TCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATCAGCTCAATCACTTTaGCATGAAAATCATTCTGAA +
Preference number: 2 (lower is better)
Translates to: SHSISWFLNYHSVDLKPGSAQSL*HENHSE
Trigger: TTCAGAATGATTTTCATGGCAAAGTGATTGAGCTGA...TCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR-3UTR CCA 90 bp AAATCTGTCCAAAGCAAATGGAGCGAAAGCCTGCTAATTCTTCAGTGCTTCATCTCTGTCCAAAGCAAATaGAGCGAAAGCCTGCTAATT +
Preference number: 2 (lower is better)
Translates to: KSVQSKWSESLLILQCFISVQSK*SESLLI
Trigger: AATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGA...GATGAAGCACTGAAGAATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR CAA 90 bp AAAGAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTG +
Preference number: 2 (lower is better)
Translates to: KESPSCIIKLTSFSS*LFCVDLCSQNSHMV
Trigger: CACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR-3UTR TCA 90 bp AAATCTGTCCAAAGCAAATGGAGCGAAAGCCTGCTAATTCTTCAGTGCTTCATCCCTGTATTATCAAGCTaGCTTCCTTTAGTTCCTTGT +
Preference number: 2 (lower is better)
Translates to: KSVQSKWSESLLILQCFIPVLSS*LPLVPC
Trigger: ACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGG...GATGAAGCACTGAAGAATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR-3UTR CCA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCCCAGAATTCTCACATaGTGTTCATTTCTGCCAGTA +
Preference number: 2 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDPRILT*CSFLPV
Trigger: TACTGGCAGAAATGAACACCATGTGAGAATTCTGGG...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR-3UTR CCA 90 bp TCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTACCCAGAATTCTCACATaGTGTTCATTTCTGCCAGTA +
Preference number: 2 (lower is better)
Translates to: SPSCIIKLTSFSSLLFCVPRILT*CSFLPV
Trigger: TACTGGCAGAAATGAACACCATGTGAGAATTCTGGG...TACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR-3UTR CCA 90 bp TCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAATGCCCATAGTACCTTaGGACCCAGGAAGATTTAAA +
Preference number: 2 (lower is better)
Translates to: SPSCIIKLTSFSSLLFCVMPIVP*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGGTACTATGGGCAT...TACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389594.7
3UTR-3UTR CCA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCCCACAGCATTTCATaGTTCCTGAATTACCACTCT +
Preference number: 2 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNSHSIS*FLNYHS
Trigger: AGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGA...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR-3UTR GCA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGGCTCAAAATTCTGCTaGAAATACAGTGATAATTTC +
Preference number: 2 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCGSKFC*KYSDNF
Trigger: GAAATTATCACTGTATTTGCAGCAGAATTTTGAGCC...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
3UTR-3UTR GCA 90 bp TCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGAAGAGCTCAAGGAAATaGTTTGTCAGATGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SFSSLLFCVDLCSQNSHMKSSRK*FVRCLS
Trigger: AGACAGACATCTGACAAAGCATTTCCTTGAGCTCTT...CATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
3UTR-3UTR CCA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATATAATTTCAGGTCATTaGCCTTCTGGTAGTTCTTCA +
Preference number: 2 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDIISGH*PSGSSS
Trigger: TGAAGAACTACCAGAAGGCCAATGACCTGAAATTAT...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
3UTR-3UTR GCA 90 bp GCTCAAAATTCTGCTGCAAATACAGTGATAATTTCAGGTCATTGGCCTTCTGGTTCAGCTCAATCACTTTaGCATGAAAATCATTCTGAA +
Preference number: 2 (lower is better)
Translates to: AQNSAANTVIISGHWPSGSAQSL*HENHSE
Trigger: TTCAGAATGATTTTCATGGCAAAGTGATTGAGCTGA...ACCAGAAGGCCAATGACCTGAAATTATCACTGTATTTGCAGCAGAATTTTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
3UTR-3UTR GCA 90 bp TCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGTCAGCTCAATCACTTTaGCATGAAAATCATTCTGAA +
Preference number: 2 (lower is better)
Translates to: SFSSLLFCVDLCSQNSHMSAQSL*HENHSE
Trigger: TTCAGAATGATTTTCATGGCAAAGTGATTGAGCTGA...CATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
3UTR-3UTR GCA 90 bp CTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCGGCTCAAAATTCTGCTaGAAATACAGTGATAATTTC +
Preference number: 2 (lower is better)
Translates to: LVVLCRSLFPEFSHGVHFGSKFC*KYSDNF
Trigger: GAAATTATCACTGTATTTGCAGCAGAATTTTGAGCC...GAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
3UTR CCA 72 bp CCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTaGTTGGTGCCACCTACTGGGCTTGGGACCCAGGAA +
Preference number: 3 (lower is better)
Translates to: PELPLCGLEAWM*LVPPTGLGTQE
Trigger: TTCCTGGGTCCCAAGCCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR CCA 72 bp ATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTaGATGTGGTTGGTGCCACCTACTGGGCTTGGGACC +
Preference number: 3 (lower is better)
Translates to: MVPELPLCGLEA*MWLVPPTGLGT
Trigger: GGTCCCAAGCCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR CCA 72 bp CCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTaGTTGGTGCCACCTACTGGGCATATAGATCCCTTG +
Preference number: 3 (lower is better)
Translates to: PELPLCGLEAWM*LVPPTGHIDPL
Trigger: CAAGGGATCTATATGCCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641812.1
3UTR CCA 72 bp ATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTaGATGTGGTTGGTGCCACCTACTGGGCATATAGAT +
Preference number: 3 (lower is better)
Translates to: MVPELPLCGLEA*MWLVPPTGHID
Trigger: ATCTATATGCCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641812.1
3UTR-3UTR CAA 90 bp GTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCGAAGCCTGGATGTGGTaGGTGCCACCTACTGGGCTT +
Preference number: 3 (lower is better)
Translates to: VVLCRSLFPEFSHGVHFCEAWMW*VPPTGL
Trigger: AAGCCCAGTAGGTGGCACCAACCACATCCAGGCTTC...GCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
3UTR-3UTR CAA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTTACCACTCTGTGGACTaGAAGCCTGGATGTGGTTGG +
Preference number: 3 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCYHSVD*KPGCGW
Trigger: CCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTA...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR CCA 72 bp TGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATaGAGCGAAAGCCTGCTAATTCTTCAGTGCTTCATC +
Preference number: 3 (lower is better)
Translates to: WLCLVFKSVQSK*SESLLILQCFI
Trigger: GATGAAGCACTGAAGAATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR-3UTR CAA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGCTCAAGGAAATGCTTaGTCAGATGTCTGTCTCCTT +
Preference number: 3 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCAQGNA*SDVCLL
Trigger: AAGGAGACAGACATCTGACAAAGCATTTCCTTGAGC...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
3UTR GCA 72 bp GAAATGCTTTGTCAGATGTCTGTCTCCTTGGCCTTCTaGTTTGAAGTAGCAGAGTCTATTCCAGCAAGATTA +
Preference number: 3 (lower is better)
Translates to: EMLCQMSVSLAF*FEVAESIPARL
Trigger: TAATCTTGCTGGAATAGACTCTGCTACTTCAAAGCAGAAGGCCAAGGAGACAGACATCTGACAAAGCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
3UTR-3UTR CAA 90 bp CTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCAGATGTCTGTCTCCTaGGCCTTCTGCTTTGAAGTA +
Preference number: 3 (lower is better)
Translates to: LTSFSSLLFCVDLCSQNSQMSVS*AFCFEV
Trigger: TACTTCAAAGCAGAAGGCCAAGGAGACAGACATCTG...AGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
3UTR-3UTR CAA 90 bp AAATCTGTCCAAAGCAAATGGAGCGAAAGCCTGCTAATTCTTCAGTGCTTCATCACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTT +
Preference number: 3 (lower is better)
Translates to: KSVQSKWSESLLILQCFITSFSS*LFCVDL
Trigger: AAGATCTACACAGAACAACAAGGAACTAAAGGAAGT...GATGAAGCACTGAAGAATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR-3UTR CAA 90 bp TCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGACCTTCAGCTAATTTaGAATGAAGTAAAACAGGGA +
Preference number: 3 (lower is better)
Translates to: SFSSLLFCVDLCSQNSHMDLQLI*NEVKQG
Trigger: TCCCTGTTTTACTTCATTCAAAATTAGCTGAAGGTC...CATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641812.1
3UTR CAA 72 bp GAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTaGGTGCCACCTACTGGGCTTGGGACCCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: ELPLCGLEAWMW*VPPTGLGTQED
Trigger: ATCTTCCTGGGTCCCAAGCCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
CDS-3UTR CCA 90 bp TGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACCATTTCCACCCAGATTaGTCGGGGGAGAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: WFLNYHSVDLKPGCGWCHHFHPD*SGERGK
Trigger: TTTCCCTCTCTCCCCCGACCAATCTGGGTGGAAATG...GTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp GTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACCTAAGCCTGGATGTGGTTaGTGCCACCTACTGGGCATA +
Preference number: 4 (lower is better)
Translates to: VPELPLCGLEAWMWLVPPKPGCG*CHLLGI
Trigger: TATGCCCAGTAGGTGGCACCAACCACATCCAGGCTT...AGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641812.1
CDS-3UTR CCA 90 bp GTCCTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAAGTTGGTGCCACCTACTaGGCTTGGGACCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VLRVIEDRSLPQHFMVPEVGATY*AWDPGR
Trigger: TCTTCCTGGGTCCCAAGCCCAGTAGGTGGCACCAAC...TTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641713.1
3UTR CAA 72 bp GAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTaGGTGCCACCTACTGGGCATATAGATCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: ELPLCGLEAWMW*VPPTGHIDPLR
Trigger: TCTCAAGGGATCTATATGCCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641812.1
CDS-3UTR GCA 90 bp CTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCTGGATGTGGTTGGTaGCACCTACTGGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LRVIEDRSLPQHFMVPELPGCGW*HLLGLG
Trigger: TCCCAAGCCCAGTAGGTGGCACCAACCACATCCAGG...TAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641713.1
CDS-3UTR CCA 90 bp GTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACCTTGTTGCTTTTCCTGGTaGAAGAAAGAGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VPELPLCGLEAWMWLVPPCCFSW*KKEPLP
Trigger: AGGAAGAGGCTCTTTCTTCCACCAGGAAAAGCAACA...AGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641536.1
CDS-3UTR CCA 90 bp CATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGTGTGGACTTGAAGCCTaGATGTGGTTGGTGCCACCT +
Preference number: 4 (lower is better)
Translates to: HFMVPELPLCGLEAWMWLCGLEA*MWLVPP
Trigger: AGGTGGCACCAACCACATCCAGGCTTCAAGTCCACA...CAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGAGTTGGTGCCACCTACTaGGCATATAGATCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SHSISWFLNYHSVDLKPGVGATY*AYRSLE
Trigger: CTCAAGGGATCTATATGCCCAGTAGGTGGCACCAAC...TCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641812.1
CDS-3UTR TCA 90 bp GTCCTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAAGGGCAGGTAAGATCCTaGAGAGTTTGCACCACTTGT +
Preference number: 4 (lower is better)
Translates to: VLRVIEDRSLPQHFMVPEGQVRS*RVCTTC
Trigger: ACAAGTGGTGCAAACTCTTCAGGATCTTACCTGCCC...TTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp GTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACCTTATCTTCTAGAGGTTTaGGCATCTCTAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VPELPLCGLEAWMWLVPPYLLEV*ASLAVP
Trigger: AGGAACTGCTAGAGATGCTCAAACCTCTAGAAGATA...AGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACTGTGGTGCTTTTTGTTaGTCACTAAGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: WFLNYHSVDLKPGCGWCHCGAFC*SLSSSA
Trigger: GGCAGAAGAACTTAGTGATCAACAAAAAGCACCACA...GTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTCCTGGATGTGGTTGGTaGCACCTACTGGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FCVDLCSQNSHMVFISASPGCGW*HLLGLG
Trigger: TCCCAAGCCCAGTAGGTGGCACCAACCACATCCAGG...ACTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641713.1
CDS-3UTR CCA 90 bp TGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACTCTGTCCAAAGCAAATaGAGCGAAAGCCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: WFLNYHSVDLKPGCGWCHSVQSK*SESLLI
Trigger: AATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGA...GTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCGTGATGAGGGGGATTTaGGAGCCTTTCCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESVMRGI*EPFHPA
Trigger: TGCAGGATGGAAAGGCTCCCAAATCCCCCTCATCAC...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389594.7
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp GTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCACTCGTGATGAGGGGGATTTaGGAGCCTTTCCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: VIEDRSLPQHFMVPELPLVMRGI*EPFHPA
Trigger: TGCAGGATGGAAAGGCTCCCAAATCCCCCTCATCAC...GAGTGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp AGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCACTTGAAGCCTGGATGTaGTTGGTGCCACCTACTGGG +
Preference number: 4 (lower is better)
Translates to: RVIEDRSLPQHFMVPELPLEAWM*LVPPTG
Trigger: CCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAG...TGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCTTGTGCTGCTGTTCTTaGAACTCCTGCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESLCCCS*NSCCSG
Trigger: TCCACTGCAGCAGGAGTTTCAAGAACAGCAGCACAA...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp GTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACCTCACCACTTGTCATCTTaGAGGGTAACTTCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: VPELPLCGLEAWMWLVPPHHLSS*RVTSKN
Trigger: ATTCTTAGAAGTTACCCTTCAAGATGACAAGTGGTG...AGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCGGGCAGGTAAGATCCTaGAGAGTTTGCACCACTTGT +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESGQVRS*RVCTTC
Trigger: ACAAGTGGTGCAAACTCTTCAGGATCTTACCTGCCC...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTGATGAGGGGGATTTaGGAGCCTTTCCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCVMRGI*EPFHPA
Trigger: TGCAGGATGGAAAGGCTCCCAAATCCCCCTCATCAC...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389594.7
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTTTGTGCTGCTGTTCTTaGAACTCCTGCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCLCCCS*NSCCSG
Trigger: TCCACTGCAGCAGGAGTTTCAAGAACAGCAGCACAA...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp ATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACACCACTTGTCATCTTaGAGGGTAACTTCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: MVPELPLCGLEAWMWLVPHHLSS*RVTSKN
Trigger: ATTCTTAGAAGTTACCCTTCAAGATGACAAGTGGTG...TGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp ATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGCTGTTTCATCTCCTCTaGTTCCTTAAGGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ISWFLNYHSVDLKPGCGWLFHLL*FLKELH
Trigger: ATGGAGCTCCTTAAGGAAGCAGAGGAGATGAAACAG...CCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp CCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGCCCAGAATTCTCACATaGTGTTCATTTCTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: PQHFMVPELPLCGLEAWMPRILT*CSFLPV
Trigger: TACTGGCAGAAATGAACACCATGTGAGAATTCTGGG...CATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp GCTGCAAATACAGTGATAATTTCAGGTCATTGGCCTTCTGGTAGTTCTTCAAGGGCCACCTACTGGGCTTaGGACCCAGGAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: AANTVIISGHWPSGSSSRATYWA*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGCCCAGTAGGTGGC...CCTTGAAGAACTACCAGAAGGCCAATGACCTGAAATTATCACTGTATTTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641536.1
CDS-3UTR CCA 90 bp ATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCGTTGGTGCCACCTACTaGGCTTGGGACCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: IIKLTSFSSLLFCVDLCSVGATY*AWDPGR
Trigger: TCTTCCTGGGTCCCAAGCCCAGTAGGTGGCACCAAC...GGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641713.1
CDS-3UTR CCA 90 bp ACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACCTTGAAGCCTGGATGTaGTTGGTGCCACCTACTGGG +
Preference number: 4 (lower is better)
Translates to: TSFSSLLFCVDLCSQNSHLEAWM*LVPPTG
Trigger: CCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAG...GTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATCTTGAAGCCTGGATGTaGTTGGTGCCACCTACTGGG +
Preference number: 4 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNLEAWM*LVPPTG
Trigger: CCCAGTAGGTGGCACCAACCACATCCAGGCTTCAAG...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTTGTGGACTTGAAGCCTaGATGTGGTTGGTGCCACCT +
Preference number: 4 (lower is better)
Translates to: FCVDLCSQNSHMVFISASCGLEA*MWLVPP
Trigger: AGGTGGCACCAACCACATCCAGGCTTCAAGTCCACA...ACTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCCATTTCCACCCAGATTaGTCGGGGGAGAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LFCVDLCSQNSHMVFISAHFHPD*SGERGK
Trigger: TTTCCCTCTCTCCCCCGACCAATCTGGGTGGAAATG...GGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTCATTTCCACCCAGATTaGTCGGGGGAGAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FCVDLCSQNSHMVFISASHFHPD*SGERGK
Trigger: TTTCCCTCTCTCCCCCGACCAATCTGGGTGGAAATG...ACTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp GCTCAAAATTCTGCTGCAAATACAGTGATAATTTCAGGTCATTGGCCTTCTGGTGGGCAGGTAAGATCCTaGAGAGTTTGCACCACTTGT +
Preference number: 4 (lower is better)
Translates to: AQNSAANTVIISGHWPSGGQVRS*RVCTTC
Trigger: ACAAGTGGTGCAAACTCTTCAGGATCTTACCTGCCC...ACCAGAAGGCCAATGACCTGAAATTATCACTGTATTTGCAGCAGAATTTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
CDS-3UTR TCA 90 bp ATGCTTTGTCAGATGTCTGTCTCCTTGGCCTTCTGCTTTGAAGTAGCAGAGTCTTATCTTCTAGAGGTTTaGGCATCTCTAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: MLCQMSVSLAFCFEVAESYLLEV*ASLAVP
Trigger: AGGAACTGCTAGAGATGCTCAAACCTCTAGAAGATA...AGACTCTGCTACTTCAAAGCAGAAGGCCAAGGAGACAGACATCTGACAAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
CDS-3UTR GCA 90 bp TCTGCTGCAAATACAGTGATAATTTCAGGTCATTGGCCTTCTGGTAGTTCTTCACTCACACCCCTTCCCTaGCATGATCTGTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: SAANTVIISGHWPSGSSSLTPLP*HDLSHD
Trigger: ATCATGAGACAGATCATGGCAGGGAAGGGGTGTGAG...TGAAGAACTACCAGAAGGCCAATGACCTGAAATTATCACTGTATTTGCAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
CDS-3UTR GCA 90 bp AAAGAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCCTCACACCCCTTCCCTaGCATGATCTGTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: KESPSCIIKLTSFSSLLFLTPLP*HDLSHD
Trigger: ATCATGAGACAGATCATGGCAGGGAAGGGGTGTGAG...GAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTCTCACACCCCTTCCCTaGCATGATCTGTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: FCVDLCSQNSHMVFISASLTPLP*HDLSHD
Trigger: ATCATGAGACAGATCATGGCAGGGAAGGGGTGTGAG...ACTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCCTGTTTCATCTCCTCTaGTTCCTTAAGGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESLFHLL*FLKELH
Trigger: ATGGAGCTCCTTAAGGAAGCAGAGGAGATGAAACAG...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp CTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTGTGATGAGGGGGATTTaGGAGCCTTTCCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: LTSFSSLLFCVDLCSQNSVMRGI*EPFHPA
Trigger: TGCAGGATGGAAAGGCTCCCAAATCCCCCTCATCAC...AGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389594.7
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCTGTTGCTTTTCCTGGTaGAAGAAAGAGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESCCFSW*KKEPLP
Trigger: AGGAAGAGGCTCTTTCTTCCACCAGGAAAAGCAACA...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389594.7
ENST00000641536.1
CDS-3UTR CCA 90 bp AAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACATGCTGTCCAATTCTTaGGACCCAGGAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: KTDLSHSISWFLNYHSVDMLSNS*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGAATTGGACAGCAT...GTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641812.1
CDS-3UTR TCA 90 bp CTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTTTGTGCTGCTGTTCTTaGAACTCCTGCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LTSFSSLLFCVDLCSQNSLCCCS*NSCCSG
Trigger: TCCACTGCAGCAGGAGTTTCAAGAACAGCAGCACAA...AGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTTGTGCTGCTGTTCTTaGAACTCCTGCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LVVLCRSLFPEFSHGVHFLCCCS*NSCCSG
Trigger: TCCACTGCAGCAGGAGTTTCAAGAACAGCAGCACAA...GAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATGGGCAGGTAAGATCCTaGAGAGTTTGCACCACTTGT +
Preference number: 4 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNGQVRS*RVCTTC
Trigger: ACAAGTGGTGCAAACTCTTCAGGATCTTACCTGCCC...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCTATCTTCTAGAGGTTTaGGCATCTCTAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESYLLEV*ASLAVP
Trigger: AGGAACTGCTAGAGATGCTCAAACCTCTAGAAGATA...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp GATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGATCTGTCTCATGATCTaGAGACTCCTTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: DLSHSISWFLNYHSVDLKICLMI*RLLCFS
Trigger: GGAAAAACAAAGGAGTCTTCAGATCATGAGACAGAT...CTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCTGTGGTGCTTTTTGTTaGTCACTAAGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESCGAFC*SLSSSA
Trigger: GGCAGAAGAACTTAGTGATCAACAAAAAGCACCACA...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCCACTTTCTCTGCAAATaGTTTCTCCAGTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESHFLCK*FLQFTL
Trigger: GAGAGTGAACTGGAGAAATCATTTGCAGAGAAAGTG...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389594.7
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATCTCACACCCCTTCCCTaGCATGATCTGTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNLTPLP*HDLSHD
Trigger: ATCATGAGACAGATCATGGCAGGGAAGGGGTGTGAG...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGCTCACACCCCTTCCCTaGCATGATCTGTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: FSSLLFCVDLCSQNSHMVLTPLP*HDLSHD
Trigger: ATCATGAGACAGATCATGGCAGGGAAGGGGTGTGAG...CACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp ATGCTTTGTCAGATGTCTGTCTCCTTGGCCTTCTGCTTTGAAGTAGCAGAGTCTAAGAGCTCAAGGAAATaGTTTGTCAGATGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: MLCQMSVSLAFCFEVAESKSSRK*FVRCLS
Trigger: AGACAGACATCTGACAAAGCATTTCCTTGAGCTCTT...AGACTCTGCTACTTCAAAGCAGAAGGCCAAGGAGACAGACATCTGACAAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
CDS-3UTR CCA 90 bp CTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACTCTGTTGCTTTTCCTaGTGGAAGAAAGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LRVIEDRSLPQHFMVPELLCCFS*WKKEPL
Trigger: AAGAGGCTCTTTCTTCCACCAGGAAAAGCAACAGAG...TAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641536.1
CDS-3UTR CCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCCCCAGAATTCTCACATaGTGTTCATTTCTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESPRILT*CSFLPV
Trigger: TACTGGCAGAAATGAACACCATGTGAGAATTCTGGG...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCTCTGTCCAAAGCAAATaGAGCGAAAGCCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESSVQSK*SESLLI
Trigger: AATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGA...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TTTTGTCCTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTCTGTCCAAAGCAAATaGAGCGAAAGCCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: FCPESNRRPISPTAFHGSSVQSK*SESLLI
Trigger: AATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGA...GGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAGGACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCATGCCCATAGTACCTTaGGACCCAGGAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESMPIVP*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGGTACTATGGGCAT...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389594.7
ENST00000636229.1
CDS-3UTR CCA 90 bp ACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACGCCACCTACTGGGCTTaGGACCCAGGAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: TSFSSLLFCVDLCSQNSHATYWA*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGCCCAGTAGGTGGC...GTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641713.1
CDS-3UTR CCA 90 bp TCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTGGACTTGAAGCCTaGATGTGGTTGGTGCCACCT +
Preference number: 4 (lower is better)
Translates to: SCIIKLTSFSSLLFCVDLCGLEA*MWLVPP
Trigger: AGGTGGCACCAACCACATCCAGGCTTCAAGTCCACA...AAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp ATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCTTGTGCTGCTGTTCTTaGAACTCCTGCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: IIKLTSFSSLLFCVDLCSLCCCS*NSCCSG
Trigger: TCCACTGCAGCAGGAGTTTCAAGAACAGCAGCACAA...GGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCCACCACTTGTCATCTTaGAGGGTAACTTCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESHHLSS*RVTSKN
Trigger: ATTCTTAGAAGTTACCCTTCAAGATGACAAGTGGTG...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGGGCAGGTAAGATCCTaGAGAGTTTGCACCACTTGT +
Preference number: 4 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISGQVRS*RVCTTC
Trigger: ACAAGTGGTGCAAACTCTTCAGGATCTTACCTGCCC...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCATCTGTCTCATGATCTaGAGACTCCTTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESICLMI*RLLCFS
Trigger: GGAAAAACAAAGGAGTCTTCAGATCATGAGACAGAT...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTTGTGGTGCTTTTTGTTaGTCACTAAGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCCGAFC*SLSSSA
Trigger: GGCAGAAGAACTTAGTGATCAACAAAAAGCACCACA...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCCCTGTATTATCAAGCTaGCTTCCTTTAGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESPVLSS*LPLVPC
Trigger: ACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGG...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACACTTTCTCTGCAAATaGTTTCTCCAGTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: LRVIEDRSLPQHFMVPELHFLCK*FLQFTL
Trigger: GAGAGTGAACTGGAGAAATCATTTGCAGAGAAAGTG...TAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTGTTTCATCTCCTCTaGTTCCTTAAGGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDLFHLL*FLKELH
Trigger: ATGGAGCTCCTTAAGGAAGCAGAGGAGATGAAACAG...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCATCACTAAGTTCTTCTaGCTCGAATGTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESITKFF*LECLVP
Trigger: TGGAACAAGACATTCGAGGCAGAAGAACTTAGTGAT...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TTTTGTCCTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCATCACTAAGTTCTTCTaGCTCGAATGTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FCPESNRRPISPTAFHGSITKFF*LECLVP
Trigger: TGGAACAAGACATTCGAGGCAGAAGAACTTAGTGAT...GGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAGGACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGAGGCTCAAAATTCTGCTaGAAATACAGTGATAATTTC +
Preference number: 4 (lower is better)
Translates to: SHSISWFLNYHSVDLKPGGSKFC*KYSDNF
Trigger: GAAATTATCACTGTATTTGCAGCAGAATTTTGAGCC...TCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp ATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAAGAGCTCAAGGAAATaGTTGGGACCCAGGAAGATT +
Preference number: 4 (lower is better)
Translates to: IKLTSFSSLLFCVDLCSQKSSRK*LGPRKI
Trigger: AATCTTCCTGGGTCCCAAGCATTTCCTTGAGCTCTT...CTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359454.10
CDS-3UTR CCA 90 bp GCTCAAAATTCTGCTGCAAATACAGTGATAATTTCAGGTCATTGGCCTTCTGGTCTCTGTTGCTTTTCCTaGTGGAAGAAAGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: AQNSAANTVIISGHWPSGLCCFS*WKKEPL
Trigger: AAGAGGCTCTTTCTTCCACCAGGAAAAGCAACAGAG...ACCAGAAGGCCAATGACCTGAAATTATCACTGTATTTGCAGCAGAATTTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
CDS-3UTR CCA 90 bp GTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTCTGTCCAAAGCAAATaGAGCGAAAGCCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: VLCRSLFPEFSHGVHFCQSVQSK*SESLLI
Trigger: AATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGA...CTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp AGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCATCCCACAGCATTTCATaGTTCCTGAATTACCACTCT +
Preference number: 4 (lower is better)
Translates to: RVIEDRSLPQHFMVPELPSHSIS*FLNYHS
Trigger: AGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGA...TGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp ATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGTATCTTCTAGAGGTTTaGGCATCTCTAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: IKLTSFSSLLFCVDLCSQYLLEV*ASLAVP
Trigger: AGGAACTGCTAGAGATGCTCAAACCTCTAGAAGATA...CTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp GTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGATCTGTCTCATGATCTaGAGACTCCTTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: VLCRSLFPEFSHGVHFCQICLMI*RLLCFS
Trigger: GGAAAAACAAAGGAGTCTTCAGATCATGAGACAGAT...CTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp AGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCAATCTGTCTCATGATCTaGAGACTCCTTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RVIEDRSLPQHFMVPELPICLMI*RLLCFS
Trigger: GGAAAAACAAAGGAGTCTTCAGATCATGAGACAGAT...TGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCTGTGGTGCTTTTTGTTaGTCACTAAGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LFCVDLCSQNSHMVFISACGAFC*SLSSSA
Trigger: GGCAGAAGAACTTAGTGATCAACAAAAAGCACCACA...GGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp ATAGTTGTAATGCCCATAGTACATCCAACGTTCAGGTTTTTCTCAGAAGAGCTCTGTGGTGCTTTTTGTTaGTCACTAAGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: IVVMPIVHPTFRFFSEELCGAFC*SLSSSA
Trigger: GGCAGAAGAACTTAGTGATCAACAAAAAGCACCACA...GAGCTCTTCTGAGAAAAACCTGAACGTTGGATGTACTATGGGCATTACAACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359454.10
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTCCTGTATTATCAAGCTaGCTTCCTTTAGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCPVLSS*LPLVPC
Trigger: ACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGG...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCCACTTTCTCTGCAAATaGTTTCTCCAGTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: LFCVDLCSQNSHMVFISAHFLCK*FLQFTL
Trigger: GAGAGTGAACTGGAGAAATCATTTGCAGAGAAAGTG...GGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389594.7
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp GTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCATCTGTCTCATGATCTaGAGACTTATTTCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: VVLCRSLFPEFSHGVHFCICLMI*RLISEG
Trigger: GCCCTCAGAAATAAGTCTTCAGATCATGAGACAGAT...GCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450299.6
CDS-3UTR GCA 90 bp TCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTCTGTTTCATCTCCTCTaGTTCCTTAAGGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLLFCVDLCSQNSHMVFILFHLL*FLKELH
Trigger: ATGGAGCTCCTTAAGGAAGCAGAGGAGATGAAACAG...AATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATCTGTTTCATCTCCTCTaGTTCCTTAAGGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNLFHLL*FLKELH
Trigger: ATGGAGCTCCTTAAGGAAGCAGAGGAGATGAAACAG...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGCTGTTTCATCTCCTCTaGTTCCTTAAGGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SFSSLLFCVDLCSQNSHMLFHLL*FLKELH
Trigger: ATGGAGCTCCTTAAGGAAGCAGAGGAGATGAAACAG...CATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp ACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACCTGTTTCATCTCCTCTaGTTCCTTAAGGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TSFSSLLFCVDLCSQNSHLFHLL*FLKELH
Trigger: ATGGAGCTCCTTAAGGAAGCAGAGGAGATGAAACAG...GTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp AAATCTGTCCAAAGCAAATGGAGCGAAAGCCTGCTAATTCTTCAGTGCTTCATCATCACTAAGTTCTTCTaGCTCGAATGTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: KSVQSKWSESLLILQCFIITKFF*LECLVP
Trigger: TGGAACAAGACATTCGAGGCAGAAGAACTTAGTGAT...GATGAAGCACTGAAGAATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp AGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCAATCACTAAGTTCTTCTaGCTCGAATGTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RVIEDRSLPQHFMVPELPITKFF*LECLVP
Trigger: TGGAACAAGACATTCGAGGCAGAAGAACTTAGTGAT...TGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp GTCCTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAAGGCTCAAAATTCTGCTaGAAATACAGTGATAATTTC +
Preference number: 4 (lower is better)
Translates to: VLRVIEDRSLPQHFMVPEGSKFC*KYSDNF
Trigger: GAAATTATCACTGTATTTGCAGCAGAATTTTGAGCC...TTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp CTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCAAGAGCTCAAGGAAATaGTTGGGACCCAGGAAGATT +
Preference number: 4 (lower is better)
Translates to: LVVLCRSLFPEFSHGVHFKSSRK*LGPRKI
Trigger: AATCTTCCTGGGTCCCAAGCATTTCCTTGAGCTCTT...GAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359454.10
ENST00000450299.6
CDS-3UTR GCA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGTCTCCTTGGCCTTCTaGTTTGAAGTAGCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISVSLAF*FEVAES
Trigger: AGACTCTGCTACTTCAAAGCAGAAGGCCAAGGAGAC...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
CDS-3UTR GCA 90 bp TTTTGTCCTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCAAGAGCTCAAGGAAATaGTTTTGTCCTGAGAGTAAT +
Preference number: 4 (lower is better)
Translates to: FCPESNRRPISPTAFHGSKSSRK*FCPESN
Trigger: ATTACTCTCAGGACAAAAGCATTTCCTTGAGCTCTT...GGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAGGACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp CTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCTCTGTTGCTTTTCCTaGTGGAAGAAAGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LTSFSSLLFCVDLCSQNSLCCFS*WKKEPL
Trigger: AAGAGGCTCTTTCTTCCACCAGGAAAAGCAACAGAG...AGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
CDS-3UTR CCA 90 bp TTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCGCTCAAGGAAATGCTTaGGACCCAGGAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: LFCVDLCSQNSHMVFISAAQGNA*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGCATTTCCTTGAGC...GGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359454.10
ENST00000450299.6
CDS-3UTR CCA 90 bp TCTGCTGCAAATACAGTGATAATTTCAGGTCATTGGCCTTCTGGTAGTTCTTCACCCAGAATTCTCACATaGTGTTCATTTCTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: SAANTVIISGHWPSGSSSPRILT*CSFLPV
Trigger: TACTGGCAGAAATGAACACCATGTGAGAATTCTGGG...TGAAGAACTACCAGAAGGCCAATGACCTGAAATTATCACTGTATTTGCAGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
CDS-3UTR CCA 90 bp GTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCCCAGAATTCTCACATaGTGTTCATTTCTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: VVLCRSLFPEFSHGVHFCPRILT*CSFLPV
Trigger: TACTGGCAGAAATGAACACCATGTGAGAATTCTGGG...GCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTCCCAGAATTCTCACATaGTGTTCATTTCTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: FCVDLCSQNSHMVFISASPRILT*CSFLPV
Trigger: TACTGGCAGAAATGAACACCATGTGAGAATTCTGGG...ACTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp GTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCTCTGTCCAAAGCAAATaGAGCGAAAGCCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: VVLCRSLFPEFSHGVHFCSVQSK*SESLLI
Trigger: AATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGA...GCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTTCTGTCCAAAGCAAATaGAGCGAAAGCCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: FCVDLCSQNSHMVFISASSVQSK*SESLLI
Trigger: AATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGA...ACTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCTCTGTCCAAAGCAAATaGAGCGAAAGCCTGCTAATT +
Preference number: 4 (lower is better)
Translates to: LFCVDLCSQNSHMVFISASVQSK*SESLLI
Trigger: AATTAGCAGGCTTTCGCTCCATTTGCTTTGGACAGA...GGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTCACCACTTGTCATCTTaGAGGGTAACTTCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: FCVDLCSQNSHMVFISASHHLSS*RVTSKN
Trigger: ATTCTTAGAAGTTACCCTTCAAGATGACAAGTGGTG...ACTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp GTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCACCACTTGTCATCTTaGAGGGTAACTTCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: VVLCRSLFPEFSHGVHFCHHLSS*RVTSKN
Trigger: ATTCTTAGAAGTTACCCTTCAAGATGACAAGTGGTG...GCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTTATCTTCTAGAGGTTTaGGCATCTCTAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LTSFSSLLFCVDLCSQNSYLLEV*ASLAVP
Trigger: AGGAACTGCTAGAGATGCTCAAACCTCTAGAAGATA...AGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTATCTTCTAGAGGTTTaGGCATCTCTAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLLFCVDLCSQNSHMVFIYLLEV*ASLAVP
Trigger: AGGAACTGCTAGAGATGCTCAAACCTCTAGAAGATA...AATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp ATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGATCTGTCTCATGATCTaGAGACTCCTTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: IKLTSFSSLLFCVDLCSQICLMI*RLLCFS
Trigger: GGAAAAACAAAGGAGTCTTCAGATCATGAGACAGAT...CTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTGTGGTGCTTTTTGTTaGTCACTAAGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNCGAFC*SLSSSA
Trigger: GGCAGAAGAACTTAGTGATCAACAAAAAGCACCACA...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCCACTTTCTCTGCAAATaGTTTCTCCAGTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: LVVLCRSLFPEFSHGVHFHFLCK*FLQFTL
Trigger: GAGAGTGAACTGGAGAAATCATTTGCAGAGAAAGTG...GAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389594.7
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTCTGTTTCATCTCCTCTaGTTCCTTAAGGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISLFHLL*FLKELH
Trigger: ATGGAGCTCCTTAAGGAAGCAGAGGAGATGAAACAG...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCATCACTAAGTTCTTCTaGCTCGAATGTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LFCVDLCSQNSHMVFISAITKFF*LECLVP
Trigger: TGGAACAAGACATTCGAGGCAGAAGAACTTAGTGAT...GGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCTCAGCTCAATCACTTTaGCATGAAAATCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESSAQSL*HENHSE
Trigger: TTCAGAATGATTTTCATGGCAAAGTGATTGAGCTGA...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCGGCTCAAAATTCTGCTaGAAATACAGTGATAATTTC +
Preference number: 4 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESGSKFC*KYSDNF
Trigger: GAAATTATCACTGTATTTGCAGCAGAATTTTGAGCC...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTAATACTGCTTCTTGTTaGATTCCAGGATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCNTASC*IPGFFP
Trigger: TGGAAAGAATCCTGGAATGCAACAAGAAGCAGTATT...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641812.1
CDS-3UTR CCA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATGCTCAAGGAAATGCTTaGGACCCAGGAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNAQGNA*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGCATTTCCTTGAGC...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359454.10
CDS-3UTR CCA 90 bp TCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTCCCAGAATTCTCACATaGTGTTCATTTCTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: SLLFCVDLCSQNSHMVFIPRILT*CSFLPV
Trigger: TACTGGCAGAAATGAACACCATGTGAGAATTCTGGG...AATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATCCCAGAATTCTCACATaGTGTTCATTTCTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNPRILT*CSFLPV
Trigger: TACTGGCAGAAATGAACACCATGTGAGAATTCTGGG...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTATGCCCATAGTACCTTaGGACCCAGGAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: SLLFCVDLCSQNSHMVFIMPIVP*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGGTACTATGGGCAT...AATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389594.7
CDS-3UTR CCA 90 bp TCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCCCACAGCATTTCATaGTTCCTGAATTACCACTCT +
Preference number: 4 (lower is better)
Translates to: SLLFCVDLCSQNSHMVFISHSIS*FLNYHS
Trigger: AGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGA...AATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR CAA 72 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCT +
Preference number: 4 (lower is better)
Translates to: PSCIIKLTSFSS*LFCVDLCSQNS
Trigger: AGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACCACTTGTCATCTTaGAGGGTAACTTCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LTSFSSLLFCVDLCSQNSHHLSS*RVTSKN
Trigger: ATTCTTAGAAGTTACCCTTCAAGATGACAAGTGGTG...AGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCCACCACTTGTCATCTTaGAGGGTAACTTCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LVVLCRSLFPEFSHGVHFHHLSS*RVTSKN
Trigger: ATTCTTAGAAGTTACCCTTCAAGATGACAAGTGGTG...GAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTATCTTCTAGAGGTTTaGGCATCTCTAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SCIIKLTSFSSLLFCVDLYLLEV*ASLAVP
Trigger: AGGAACTGCTAGAGATGCTCAAACCTCTAGAAGATA...AAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGATCTGTCTCATGATCTaGAGACTCCTTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: FSSLLFCVDLCSQNSHMVICLMI*RLLCFS
Trigger: GGAAAAACAAAGGAGTCTTCAGATCATGAGACAGAT...CACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGATCTGTCTCATGATCTaGAGACTCCTTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SFSSLLFCVDLCSQNSHMICLMI*RLLCFS
Trigger: GGAAAAACAAAGGAGTCTTCAGATCATGAGACAGAT...CATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTGGTGCTTTTTGTTaGTCACTAAGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SCIIKLTSFSSLLFCVDLCGAFC*SLSSSA
Trigger: GGCAGAAGAACTTAGTGATCAACAAAAAGCACCACA...AAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp CTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCCTGTATTATCAAGCTaGCTTCCTTTAGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LTSFSSLLFCVDLCSQNSPVLSS*LPLVPC
Trigger: ACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGG...AGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp ACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACCCTGTATTATCAAGCTaGCTTCCTTTAGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TSFSSLLFCVDLCSQNSHPVLSS*LPLVPC
Trigger: ACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGG...GTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp ATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGATAGATCCCTTGAGATaGCCTTCAGCTAATTTTGAA +
Preference number: 4 (lower is better)
Translates to: IKLTSFSSLLFCVDLCSQIDPLR*PSANFE
Trigger: TTCAAAATTAGCTGAAGGTCATCTCAAGGGATCTAT...CTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641812.1
CDS-3UTR GCA 90 bp TCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTATCACTAAGTTCTTCTaGCTCGAATGTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SLLFCVDLCSQNSHMVFIITKFF*LECLVP
Trigger: TGGAACAAGACATTCGAGGCAGAAGAACTTAGTGAT...AATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp GTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTCAGCTCAATCACTTTaGCATGAAAATCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLCRSLFPEFSHGVHFCQSAQSL*HENHSE
Trigger: TTCAGAATGATTTTCATGGCAAAGTGATTGAGCTGA...CTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp AGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCAGGCTCAAAATTCTGCTaGAAATACAGTGATAATTTC +
Preference number: 4 (lower is better)
Translates to: RVIEDRSLPQHFMVPELPGSKFC*KYSDNF
Trigger: GAAATTATCACTGTATTTGCAGCAGAATTTTGAGCC...TGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp ATAGTTGTAATGCCCATAGTACATCCAACGTTCAGGTTTTTCTCAGAAGAGCTCAAGAGCTCAAGGAAATaGTTTTGTCCTGAGAGTAAT +
Preference number: 4 (lower is better)
Translates to: IVVMPIVHPTFRFFSEELKSSRK*FCPESN
Trigger: ATTACTCTCAGGACAAAAGCATTTCCTTGAGCTCTT...GAGCTCTTCTGAGAAAAACCTGAACGTTGGATGTACTATGGGCATTACAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
3UTR CAA 72 bp TCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTaGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCAC +
Preference number: 4 (lower is better)
Translates to: SCIIKLTSFSSL*FCVDLCSQNSH
Trigger: GTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTCACCACTTGTCATCTTaGAGGGTAACTTCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISHHLSS*RVTSKN
Trigger: ATTCTTAGAAGTTACCCTTCAAGATGACAAGTGGTG...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp ATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCCTGTATTATCAAGCTaGCTTCCTTTAGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: IIKLTSFSSLLFCVDLCSPVLSS*LPLVPC
Trigger: ACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGG...GGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTCCTGTATTATCAAGCTaGCTTCCTTTAGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISPVLSS*LPLVPC
Trigger: ACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGG...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATTCAGCTCAATCACTTTaGCATGAAAATCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDSAQSL*HENHSE
Trigger: TTCAGAATGATTTTCATGGCAAAGTGATTGAGCTGA...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTATCAGCTCAATCACTTTaGCATGAAAATCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SPSCIIKLTSFSSLLFCVSAQSL*HENHSE
Trigger: TTCAGAATGATTTTCATGGCAAAGTGATTGAGCTGA...TACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATGGCTCAAAATTCTGCTaGAAATACAGTGATAATTTC +
Preference number: 4 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDGSKFC*KYSDNF
Trigger: GAAATTATCACTGTATTTGCAGCAGAATTTTGAGCC...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp ATAGTTGTAATGCCCATAGTACATCCAACGTTCAGGTTTTTCTCAGAAGAGCTCGGCTCAAAATTCTGCTaGAAATACAGTGATAATTTC +
Preference number: 4 (lower is better)
Translates to: IVVMPIVHPTFRFFSEELGSKFC*KYSDNF
Trigger: GAAATTATCACTGTATTTGCAGCAGAATTTTGAGCC...GAGCTCTTCTGAGAAAAACCTGAACGTTGGATGTACTATGGGCATTACAACTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359454.10
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp CTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTAAGAGCTCAAGGAAATaGTTTTGTCCTGAGAGTAAT +
Preference number: 4 (lower is better)
Translates to: LTSFSSLLFCVDLCSQNSKSSRK*FCPESN
Trigger: ATTACTCTCAGGACAAAAGCATTTCCTTGAGCTCTT...AGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATATAATTTCAGGTCATTaGCCTTCTGGTAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNIISGH*PSGSSS
Trigger: TGAAGAACTACCAGAAGGCCAATGACCTGAAATTAT...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTCCCAGAATTCTCACATaGTGTTCATTTCTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: CIIKLTSFSSLLFCVDLCPRILT*CSFLPV
Trigger: TACTGGCAGAAATGAACACCATGTGAGAATTCTGGG...ACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCACAGCATTTCATaGTTCCTGAATTACCACTCT +
Preference number: 4 (lower is better)
Translates to: CIIKLTSFSSLLFCVDLCSHSIS*FLNYHS
Trigger: AGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGA...ACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR TCA 90 bp TGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTCCTGTATTATCAAGCTaGCTTCCTTTAGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: CIIKLTSFSSLLFCVDLCPVLSS*LPLVPC
Trigger: ACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGG...ACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTATCACTAAGTTCTTCTaGCTCGAATGTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CIIKLTSFSSLLFCVDLCITKFF*LECLVP
Trigger: TGGAACAAGACATTCGAGGCAGAAGAACTTAGTGAT...ACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp ACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACTCAGCTCAATCACTTTaGCATGAAAATCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: TSFSSLLFCVDLCSQNSHSAQSL*HENHSE
Trigger: TTCAGAATGATTTTCATGGCAAAGTGATTGAGCTGA...GTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCAGCTCAATCACTTTaGCATGAAAATCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLLFCVDLCSQNSHMVFISAQSL*HENHSE
Trigger: TTCAGAATGATTTTCATGGCAAAGTGATTGAGCTGA...AATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTTCAGCTCAATCACTTTaGCATGAAAATCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISSAQSL*HENHSE
Trigger: TTCAGAATGATTTTCATGGCAAAGTGATTGAGCTGA...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR GCA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGGCTCAAAATTCTGCTaGAAATACAGTGATAATTTC +
Preference number: 4 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISGSKFC*KYSDNF
Trigger: GAAATTATCACTGTATTTGCAGCAGAATTTTGAGCC...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CCA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTACAATTCTAATTCCTTaGGACCCAGGAAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISTILIP*DPGRFK
Trigger: TTTAAATCTTCCTGGGTCCCAAGGAATTAGAATTGT...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
CDS-3UTR CAA 90 bp TGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACGGTGATGAGGGGGATTaGGGAGCCTTTCCATCCTGC +
Preference number: 5 (lower is better)
Translates to: WFLNYHSVDLKPGCGWCHGDEGD*GAFPSC
Trigger: GCAGGATGGAAAGGCTCCCAAATCCCCCTCATCACC...GTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACGAAGCCTGGATGTGGTaGGTGCCACCTACTGGGCTT +
Preference number: 5 (lower is better)
Translates to: WFLNYHSVDLKPGCGWCHEAWMW*VPPTGL
Trigger: AAGCCCAGTAGGTGGCACCAACCACATCCAGGCTTC...GTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641713.1
CDS-3UTR CAA 90 bp TCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGAGAAGCCTGGATGTGGTaGGTGCCACCTACTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SHSISWFLNYHSVDLKPGEAWMW*VPPTGL
Trigger: AAGCCCAGTAGGTGGCACCAACCACATCCAGGCTTC...TCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641713.1
CDS CCA 90 bp AGGCAACAAAACCGTGTGATAATGGAGGCAGAGATTGGAGTGGCGTaGCTGAAAGACAAGGAATGTCAAGGATTGTTGGCCCCCACAAGA +
Preference number: 5 (lower is better)
Translates to: RQQNRVIMEAEIGVA*LKDKECQGLLAPTR
Trigger: TCTTGTGGGGGCCAACAATCCTTGACATTCCTTGTCTTTCAGCCACGCCACTCCAATCTCTGCCTCCATTATCACACGGTTTTGTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS-3UTR CAA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCGGTGATGAGGGGGATTaGGGAGCCTTTCCATCCTGC +
Preference number: 5 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESGDEGD*GAFPSC
Trigger: GCAGGATGGAAAGGCTCCCAAATCCCCCTCATCACC...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389594.7
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp ATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGTGATGAGGGGGATTaGGGAGCCTTTCCATCCTGC +
Preference number: 5 (lower is better)
Translates to: IEDRSLPQHFMVPELPLCGDEGD*GAFPSC
Trigger: GCAGGATGGAAAGGCTCCCAAATCCCCCTCATCACC...ACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS GCA 90 bp TGGGCACAGAAAATACGCCTTATCTCTTCTCACATCCAGGCCTTCTaGCTCTTCCATGCTGCTGACTCTATGATGTTCCCTAAGTTCGAC +
Preference number: 5 (lower is better)
Translates to: WAQKIRLISSHIQAF*LFHAADSMMFPKFD
Trigger: GTCGAACTTAGGGAACATCATAGAGTCAGCAGCATGGAAGAGGCAGAAGGCCTGGATGTGAGAAGAGATAAGGCGTATTTTCTGTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS-3UTR CAA 90 bp CATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGTACCACTCTGTGGACTaGAAGCCTGGATGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: HFMVPELPLCGLEAWMWLYHSVD*KPGCGW
Trigger: CCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTA...CAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp GATCTCTCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGTACCACTCTGTGGACTaGAAGCCTGGATGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: DLSHSISWFLNYHSVDLKYHSVD*KPGCGW
Trigger: CCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTA...CTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGAGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp GTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTGCCACCTTCCTTCCGAAGCATCTaGTTTTTCCTTTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: VPELPLCGLEAWMWLVPPSFRSI*FFLSKF
Trigger: GAACTTGGAAAGGAAAAACAAGATGCTTCGGAAGGA...AGGTGGCACCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641536.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATGGTGATGAGGGGGATTaGGGAGCCTTTCCATCCTGC +
Preference number: 5 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDGDEGD*GAFPSC
Trigger: GCAGGATGGAAAGGCTCCCAAATCCCCCTCATCACC...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389594.7
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS CCA 90 bp TTGCAGGCTTGTGTGAAGATAAATAAGCATTATAGCGCCTGGTCATaGGTGGGCACAGAAAATACGCCTTATCTCTTCTCACATCCAGGC +
Preference number: 5 (lower is better)
Translates to: LQACVKINKHYSAWS*VGTENTPYLFSHPG
Trigger: GCCTGGATGTGAGAAGAGATAAGGCGTATTTTCTGTGCCCACCCATGACCAGGCGCTATAATGCTTATTTATCTTCACACAAGCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS-3UTR CAA 90 bp TCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTGAAGCCTGGATGTGGTaGGTGCCACCTACTGGGCAT +
Preference number: 5 (lower is better)
Translates to: SLLFCVDLCSQNSHMVFIEAWMW*VPPTGH
Trigger: ATGCCCAGTAGGTGGCACCAACCACATCCAGGCTTC...AATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641812.1
CDS-3UTR CAA 90 bp ATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGATGTGGTTGGTCTGCCTCGAATGTCTaGTTCCATAGCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: ISWFLNYHSVDLKPGCGWSASNV*FHSISI
Trigger: AATGGAGATGCTATGGAACAAGACATTCGAGGCAGA...CCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGGTGATGAGGGGGATTaGGGAGCCTTTCCATCCTGC +
Preference number: 5 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISGDEGD*GAFPSC
Trigger: GCAGGATGGAAAGGCTCCCAAATCCCCCTCATCACC...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389594.7
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp ACGTTCAGGTTTTTCTCAGAAGAGCTCAAGGAAATGCTTGGGACCCAGGAAGATTTATCTTCTAGAGGTTaGAGCATCTCTAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: TFRFFSEELKEMLGTQEDLSSRG*SISSSS
Trigger: GGAACTGCTAGAGATGCTCAAACCTCTAGAAGATAA...ATCTTCCTGGGTCCCAAGCATTTCCTTGAGCTCTTCTGAGAAAAACCTGAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359454.10
CDS-3UTR CAA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCTCTGCCTCGAATGTCTaGTTCCATAGCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESSASNV*FHSISI
Trigger: AATGGAGATGCTATGGAACAAGACATTCGAGGCAGA...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp ACGTTCAGGTTTTTCTCAGAAGAGCTCAAGGAAATGCTTGGGACCCAGGAAGATCTGTGGTGCTTTTTGTaGATCACTAAGTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TFRFFSEELKEMLGTQEDLWCFL*ITKFFC
Trigger: GCAGAAGAACTTAGTGATCAACAAAAAGCACCACAG...ATCTTCCTGGGTCCCAAGCATTTCCTTGAGCTCTTCTGAGAAAAACCTGAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359454.10
CDS-3UTR CAA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTCAGATGTCTGTCTCCTaGGCCTTCTGCTTTGAAGTA +
Preference number: 5 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCQMSVS*AFCFEV
Trigger: TACTTCAAAGCAGAAGGCCAAGGAGACAGACATCTG...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
CDS CCA 90 bp AACTTCTTGCAGGCTTGTGTGAAGATAAATAAGCATTATAGCGCCTaGTCATGGGTGGGCACAGAAAATACGCCTTATCTCTTCTCACAT +
Preference number: 5 (lower is better)
Translates to: NFLQACVKINKHYSA*SWVGTENTPYLFSH
Trigger: ATGTGAGAAGAGATAAGGCGTATTTTCTGTGCCCACCCATGACCAGGCGCTATAATGCTTATTTATCTTCACACAAGCCTGCAAGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS-3UTR CAA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCTTATCTTCTAGAGGTTaGAGCATCTCTAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESLSSRG*SISSSS
Trigger: GGAACTGCTAGAGATGCTCAAACCTCTAGAAGATAA...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCTCCTTCCGAAGCATCTaGTTTTTCCTTTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESSFRSI*FFLSKF
Trigger: GAACTTGGAAAGGAAAAACAAGATGCTTCGGAAGGA...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp GTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTCTGCCTCGAATGTCTaGTTCCATAGCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: VLCRSLFPEFSHGVHFCQSASNV*FHSISI
Trigger: AATGGAGATGCTATGGAACAAGACATTCGAGGCAGA...CTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCCTGTGGTGCTTTTTGTaGATCACTAAGTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESLWCFL*ITKFFC
Trigger: GCAGAAGAACTTAGTGATCAACAAAAAGCACCACAG...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp GTCCTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAACTGAAGGATGTTATTTaGTTCCTGATACTTGACCCA +
Preference number: 5 (lower is better)
Translates to: VLRVIEDRSLPQHFMVPELKDVI*FLILDP
Trigger: TGGGTCAAGTATCAGGAACAAAATAACATCCTTCAG...TTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp ATGCTTTGTCAGATGTCTGTCTCCTTGGCCTTCTGCTTTGAAGTAGCAGAGTCTGTTCTGTGTAGATCTTaGTTCCCAGAATTCTCACAT +
Preference number: 5 (lower is better)
Translates to: MLCQMSVSLAFCFEVAESVLCRS*FPEFSH
Trigger: ATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC...AGACTCTGCTACTTCAAAGCAGAAGGCCAAGGAGACAGACATCTGACAAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
CDS-3UTR CAA 90 bp TCCCACAGCATTTCATGGTTCCTGAATTACCACTCTGTGGACTTGAAGCCTGGAACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: SHSISWFLNYHSVDLKPGTSFSS*LFCVDL
Trigger: AAGATCTACACAGAACAACAAGGAACTAAAGGAAGT...TCCAGGCTTCAAGTCCACAGAGTGGTAATTCAGGAACCATGAAATGCTGTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTTACCACTCTGTGGACTaGAAGCCTGGATGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISYHSVD*KPGCGW
Trigger: CCAACCACATCCAGGCTTCAAGTCCACAGAGTGGTA...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS TCA 90 bp CTGAGGGCAGGTAAGATCCTGAAGAGTTTGCACCACTTGTCATCTTaGAGGGTAACTTCTAAGAATAAAGAGGCCTTCCTGAAAATATGT +
Preference number: 5 (lower is better)
Translates to: LRAGKILKSLHHLSS*RVTSKNKEAFLKIC
Trigger: ACATATTTTCAGGAAGGCCTCTTTATTCTTAGAAGTTACCCTTCAAGATGACAAGTGGTGCAAACTCTTCAGGATCTTACCTGCCCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTATCTGCCTCGAATGTCTaGTTCCATAGCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: SPSCIIKLTSFSSLLFCVSASNV*FHSISI
Trigger: AATGGAGATGCTATGGAACAAGACATTCGAGGCAGA...TACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATTCTGCCTCGAATGTCTaGTTCCATAGCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDSASNV*FHSISI
Trigger: AATGGAGATGCTATGGAACAAGACATTCGAGGCAGA...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTCTGTGGTGCTTTTTGTaGATCACTAAGTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCLWCFL*ITKFFC
Trigger: GCAGAAGAACTTAGTGATCAACAAAAAGCACCACAG...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCCTGAAGGATGTTATTTaGTTCCTGATACTTGACCCA +
Preference number: 5 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESLKDVI*FLILDP
Trigger: TGGGTCAAGTATCAGGAACAAAATAACATCCTTCAG...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCGTTCTGTGTAGATCTTaGTTCCCAGAATTCTCACAT +
Preference number: 5 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESVLCRS*FPEFSH
Trigger: ATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS TCA 90 bp TTAAAGACAGCCAAAGAAATTATGACAACATCTGCAGCAGAGCTATaGATGCGGCCTTATTTGGAAATAGGGCCTTTGAGGATGCAATCA +
Preference number: 5 (lower is better)
Translates to: LKTAKEIMTTSAAEL*MRPYLEIGPLRMQS
Trigger: TGATTGCATCCTCAAAGGCCCTATTTCCAAATAAGGCCGCATTCATAGCTCTGCTGCAGATGTTGTCATAATTTCTTTGGCTGTCTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS GCA 90 bp GAGCTCAAGGAAATGCTTTGTCAGATGTCTGTCTCCTTGGCCTTCTaGTTTGAAGTAGCAGAGTCTATTCCAGCAAGATTAATAAGATTA +
Preference number: 5 (lower is better)
Translates to: ELKEMLCQMSVSLAF*FEVAESIPARLIRL
Trigger: TAATCTTATTAATCTTGCTGGAATAGACTCTGCTACTTCAAAGCAGAAGGCCAAGGAGACAGACATCTGACAAAGCATTTCCTTGAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
CDS GCA 90 bp CACCCAAATTCCATTAAAGACAGCCAAAGAAATTATGACAACATCTaGAGCAGAGCTATGAATGCGGCCTTATTTGGAAATAGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: HPNSIKDSQRNYDNI*SRAMNAALFGNRAF
Trigger: AAAGGCCCTATTTCCAAATAAGGCCGCATTCATAGCTCTGCTGCAGATGTTGTCATAATTTCTTTGGCTGTCTTTAATGGAATTTGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS-3UTR CAA 90 bp TTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCTTATCTTCTAGAGGTTaGAGCATCTCTAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LFCVDLCSQNSHMVFISALSSRG*SISSSS
Trigger: GGAACTGCTAGAGATGCTCAAACCTCTAGAAGATAA...GGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp GTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCTCCTTCCGAAGCATCTaGTTTTTCCTTTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: VVLCRSLFPEFSHGVHFCSFRSI*FFLSKF
Trigger: GAACTTGGAAAGGAAAAACAAGATGCTTCGGAAGGA...GCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTATCCTTCCGAAGCATCTaGTTTTTCCTTTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: SPSCIIKLTSFSSLLFCVSFRSI*FFLSKF
Trigger: GAACTTGGAAAGGAAAAACAAGATGCTTCGGAAGGA...TACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATTCCTTCCGAAGCATCTaGTTTTTCCTTTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDSFRSI*FFLSKF
Trigger: GAACTTGGAAAGGAAAAACAAGATGCTTCGGAAGGA...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTGCCTCGAATGTCTaGTTCCATAGCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNSASNV*FHSISI
Trigger: AATGGAGATGCTATGGAACAAGACATTCGAGGCAGA...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTGTGGTGCTTTTTGTaGATCACTAAGTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDLWCFL*ITKFFC
Trigger: GCAGAAGAACTTAGTGATCAACAAAAAGCACCACAG...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp ATAGTTGTAATGCCCATAGTACATCCAACGTTCAGGTTTTTCTCAGAAGAGCTCCTGTGGTGCTTTTTGTaGATCACTAAGTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: IVVMPIVHPTFRFFSEELLWCFL*ITKFFC
Trigger: GCAGAAGAACTTAGTGATCAACAAAAAGCACCACAG...GAGCTCTTCTGAGAAAAACCTGAACGTTGGATGTACTATGGGCATTACAACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359454.10
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTTCTGTGTAGATCTTaGTTCCCAGAATTCTCACAT +
Preference number: 5 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCVLCRS*FPEFSH
Trigger: ATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CACAAATGGCTGTGCCTAGTCTTTAAATCTGTCCAAAGCAAATGGAGCGAAAGCACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: HKWLCLVFKSVQSKWSESTSFSS*LFCVDL
Trigger: AAGATCTACACAGAACAACAAGGAACTAAAGGAAGT...GCTTTCGCTCCATTTGCTTTGGACAGATTTAAAGACTAGGCACAGCCATTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGGCTCAAGGAAATGCTTaGTCAGATGTCTGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: FSSLLFCVDLCSQNSHMVAQGNA*SDVCLL
Trigger: AAGGAGACAGACATCTGACAAAGCATTTCCTTGAGC...CACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411796.6
CDS-3UTR CAA 90 bp TCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGTTATCTTCTAGAGGTTaGAGCATCTCTAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: SFSSLLFCVDLCSQNSHMLSSRG*SISSSS
Trigger: GGAACTGCTAGAGATGCTCAAACCTCTAGAAGATAA...CATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CTTGCATTGGCTCAAAATTCTGCTGCAAATACAGTGATAATTTCAGGTCATTGGTCCTTCCGAAGCATCTaGTTTTTCCTTTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: LALAQNSAANTVIISGHWSFRSI*FFLSKF
Trigger: GAACTTGGAAAGGAAAAACAAGATGCTTCGGAAGGA...CCAATGACCTGAAATTATCACTGTATTTGCAGCAGAATTTTGAGCCAATGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
CDS-3UTR CAA 90 bp TTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTCCTTCCGAAGCATCTaGTTTTTCCTTTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: FSSLLFCVDLCSQNSHMVSFRSI*FFLSKF
Trigger: GAACTTGGAAAGGAAAAACAAGATGCTTCGGAAGGA...CACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGCTGTGGTGCTTTTTGTaGATCACTAAGTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SFSSLLFCVDLCSQNSHMLWCFL*ITKFFC
Trigger: GCAGAAGAACTTAGTGATCAACAAAAAGCACCACAG...CATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTCTGAAGGATGTTATTTaGTTCCTGATACTTGACCCA +
Preference number: 5 (lower is better)
Translates to: FCVDLCSQNSHMVFISASLKDVI*FLILDP
Trigger: TGGGTCAAGTATCAGGAACAAAATAACATCCTTCAG...ACTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TCTGCTGCAAATACAGTGATAATTTCAGGTCATTGGCCTTCTGGTAGTTCTTCAGTTCTGTGTAGATCTTaGTTCCCAGAATTCTCACAT +
Preference number: 5 (lower is better)
Translates to: SAANTVIISGHWPSGSSSVLCRS*FPEFSH
Trigger: ATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC...TGAAGAACTACCAGAAGGCCAATGACCTGAAATTATCACTGTATTTGCAGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000641536.1
CDS-3UTR CAA 90 bp TTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCAGTGTTCTGTGTAGATCTTaGTTCCCAGAATTCTCACAT +
Preference number: 5 (lower is better)
Translates to: FCVDLCSQNSHMVFISASVLCRS*FPEFSH
Trigger: ATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC...ACTGGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp ATAGTTGTAATGCCCATAGTACATCCAACGTTCAGGTTTTTCTCAGAAGAGCTCGTTCTGTGTAGATCTTaGTTCCCAGAATTCTCACAT +
Preference number: 5 (lower is better)
Translates to: IVVMPIVHPTFRFFSEELVLCRS*FPEFSH
Trigger: ATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC...GAGCTCTTCTGAGAAAAACCTGAACGTTGGATGTACTATGGGCATTACAACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359454.10
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp GAGTCTCCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: ESPSCIIKLTSFSSLLFCTSFSS*LFCVDL
Trigger: AAGATCTACACAGAACAACAAGGAACTAAAGGAAGT...ACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGGAGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CTGAGAGTAATAGAAGACCGATCTCTCCCACAGCATTTCATGGTTCCTGAATTAGACCTTCAGCTAATTTaGAATGAAGTAAAACAGGGA +
Preference number: 5 (lower is better)
Translates to: LRVIEDRSLPQHFMVPELDLQLI*NEVKQG
Trigger: TCCCTGTTTTACTTCATTCAAAATTAGCTGAAGGTC...TAATTCAGGAACCATGAAATGCTGTGGGAGAGATCGGTCTTCTATTACTCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641812.1
CDS-3UTR CAA 90 bp TGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCTGCCTCGAATGTCTaGTTCCATAGCATCTCCATT +
Preference number: 5 (lower is better)
Translates to: CIIKLTSFSSLLFCVDLCSASNV*FHSISI
Trigger: AATGGAGATGCTATGGAACAAGACATTCGAGGCAGA...ACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTCTGTGGTGCTTTTTGTaGATCACTAAGTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISLWCFL*ITKFFC
Trigger: GCAGAAGAACTTAGTGATCAACAAAAAGCACCACAG...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTCTGTGGTGCTTTTTGTaGATCACTAAGTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SCIIKLTSFSSLLFCVDLLWCFL*ITKFFC
Trigger: GCAGAAGAACTTAGTGATCAACAAAAAGCACCACAG...AAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCCTGAAGGATGTTATTTaGTTCCTGATACTTGACCCA +
Preference number: 5 (lower is better)
Translates to: LVVLCRSLFPEFSHGVHFLKDVI*FLILDP
Trigger: TGGGTCAAGTATCAGGAACAAAATAACATCCTTCAG...GAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTCTGAAGGATGTTATTTaGTTCCTGATACTTGACCCA +
Preference number: 5 (lower is better)
Translates to: SLLFCVDLCSQNSHMVFILKDVI*FLILDP
Trigger: TGGGTCAAGTATCAGGAACAAAATAACATCCTTCAG...AATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTGTTCTGTGTAGATCTTaGTTCCCAGAATTCTCACAT +
Preference number: 5 (lower is better)
Translates to: LTSFSSLLFCVDLCSQNSVLCRS*FPEFSH
Trigger: ATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC...AGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp AAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATGTTCTGTGTAGATCTTaGTTCCCAGAATTCTCACAT +
Preference number: 5 (lower is better)
Translates to: KLTSFSSLLFCVDLCSQNVLCRS*FPEFSH
Trigger: ATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC...ATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGCCACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: LFCVDLCSQNSHMVFISATSFSS*LFCVDL
Trigger: AAGATCTACACAGAACAACAAGGAACTAAAGGAAGT...GGCAGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp CCCTCCTGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: PSCIIKLTSFSSLLFCVDTSFSS*LFCVDL
Trigger: AAGATCTACACAGAACAACAAGGAACTAAAGGAAGT...ATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACAGGAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTTATCTTCTAGAGGTTaGAGCATCTCTAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: CIIKLTSFSSLLFCVDLCLSSRG*SISSSS
Trigger: GGAACTGCTAGAGATGCTCAAACCTCTAGAAGATAA...ACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACATGGTGTTCATTTCTGTTCTGTGTAGATCTTaGTTCCCAGAATTCTCACAT +
Preference number: 5 (lower is better)
Translates to: LLFCVDLCSQNSHMVFISVLCRS*FPEFSH
Trigger: ATGTGAGAATTCTGGGAACAAAGATCTACACAGAAC...AGAAATGAACACCATGTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000450299.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp ACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCCAGAATTCTCACACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: TSFSSLLFCVDLCSQNSHTSFSS*LFCVDL
Trigger: AAGATCTACACAGAACAACAAGGAACTAAAGGAAGT...GTGAGAATTCTGGGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTCTGAAGGATGTTATTTaGTTCCTGATACTTGACCCA +
Preference number: 5 (lower is better)
Translates to: CIIKLTSFSSLLFCVDLCLKDVI*FLILDP
Trigger: TGGGTCAAGTATCAGGAACAAAATAACATCCTTCAG...ACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp ATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTTCCACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: IIKLTSFSSLLFCVDLCSTSFSS*LFCVDL
Trigger: AAGATCTACACAGAACAACAAGGAACTAAAGGAAGT...GGAACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS-3UTR CAA 90 bp TGTATTATCAAGCTGACTTCCTTTAGTTCCTTGTTGTTCTGTGTAGATCTTTGTACTTCCTTTAGTTCCTaGTTGTTCTGTGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: CIIKLTSFSSLLFCVDLCTSFSS*LFCVDL
Trigger: AAGATCTACACAGAACAACAAGGAACTAAAGGAAGT...ACAAAGATCTACACAGAACAACAAGGAACTAAAGGAAGTCAGCTTGATAATACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS TCA 72 bp TCCAGGCCTTCTGCCTCTTCCATGCTGCTGACTCTATaGTGTTCCCTAAGTTCGACTTGTGCCTCAAGACTT +
Preference number: 6 (lower is better)
Translates to: SRPSASSMLLTL*CSLSSTCASRL
Trigger: AAGTCTTGAGGCACAAGTCGAACTTAGGGAACATCATAGAGTCAGCAGCATGGAAGAGGCAGAAGGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS GCA 72 bp GAGCTCCATGACCGAGGATTCCTCACACCCCTTCCCTaGCATGATCTGTCTCATGATCTGAAGACTTATTTC +
Preference number: 6 (lower is better)
Translates to: ELHDRGFLTPLP*HDLSHDLKTYF
Trigger: GAAATAAGTCTTCAGATCATGAGACAGATCATGGCAGGGAAGGGGTGTGAGGAATCCTCGGTCATGGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450299.6
CDS GCA 72 bp GTTGTCATCTATTTTAGAACTTCTCACTGGAAGCTCTaGCTCCCTGGTTCACACCATTCTCCTGCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: VVIYFRTSHWKL*LPGSHHSPASA
Trigger: GGCTGAGGCAGGAGAATGGTGTGAACCAGGGAGGCAGAGCTTCCAGTGAGAAGTTCTAAAATAGATGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641281.1
CDS GCA 72 bp GAGCTCAAGGAAATGCAAGTTCTGTTTCATCTCCTCTaGTTCCTTAAGGAGCTCCATGACCGAGGATTCCTC +
Preference number: 6 (lower is better)
Translates to: ELKEMQVLFHLL*FLKELHDRGFL
Trigger: GAGGAATCCTCGGTCATGGAGCTCCTTAAGGAAGCAGAGGAGATGAAACAGAACTTGCATTTCCTTGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432289.5
CDS CAA 90 bp TGCCTCTTCCATGCTGCTGACTCTATGATGTTCCCTAAGTTCGACTaGTGCCTCAAGACTTCCCTTCTCCCGTCAACAAGAAGAATTAGA +
Preference number: 6 (lower is better)
Translates to: CLFHAADSMMFPKFD*CLKTSLLPSTRRIR
Trigger: TCTAATTCTTCTTGTTGACGGGAGAAGGGAAGTCTTGAGGCACAAGTCGAACTTAGGGAACATCATAGAGTCAGCAGCATGGAAGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS TCA 72 bp TGGAAGGAAAGAATGTGCCTTGAGCTGTTGCAGGGGTaGCTCAAGGCAGAGATTTTTGACACCGTTGATCAT +
Preference number: 6 (lower is better)
Translates to: WKERMCLELLQG*LKAEIFDTVDH
Trigger: ATGATCAACGGTGTCAAAAATCTCTGCCTTGAGTCACCCCTGCAACAGCTCAAGGCACATTCTTTCCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS TCA 72 bp GCCAAAGAAATTATGACAACATCTGCAGCAGAGCTATaGATGCGGCCTTATTTGGAAATAGGGCCTTTGAGG +
Preference number: 6 (lower is better)
Translates to: AKEIMTTSAAEL*MRPYLEIGPLR
Trigger: CCTCAAAGGCCCTATTTCCAAATAAGGCCGCATTCATAGCTCTGCTGCAGATGTTGTCATAATTTCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS TCA 72 bp GGTAAGATCCTGAAGAGTTTGCACCACTTGTCATCTTaGAGGGTAACTTCTAAGAATAAAGAGGCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: GKILKSLHHLSS*RVTSKNKEAFL
Trigger: CAGGAAGGCCTCTTTATTCTTAGAAGTTACCCTTCAAGATGACAAGTGGTGCAAACTCTTCAGGATCTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000450299.6
ENST00000636229.1
ENST00000641536.1
ENST00000641713.1
ENST00000641812.1
CDS CCA 72 bp TGTGTGAAGATAAATAAGCATTATAGCGCCTGGTCATaGGTGGGCACAGAAAATACGCCTTATCTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: CVKINKHYSAWS*VGTENTPYLFS
Trigger: TGAGAAGAGATAAGGCGTATTTTCTGTGCCCACCCATGACCAGGCGCTATAATGCTTATTTATCTTCACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS GCA 72 bp TCCATTAAAGACAGCCAAAGAAATTATGACAACATCTaGAGCAGAGCTATGAATGCGGCCTTATTTGGAAAT +
Preference number: 6 (lower is better)
Translates to: SIKDSQRNYDNI*SRAMNAALFGN
Trigger: ATTTCCAAATAAGGCCGCATTCATAGCTCTGCTGCAGATGTTGTCATAATTTCTTTGGCTGTCTTTAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641761.1
CDS TCA 72 bp TTTGAAATAAGAGGTTGTTTTTATCTTCTAGAGGTTTaGGCATCTCTAGCAGTTCCTGCTTCCTTAGCTTTA +
Preference number: 6 (lower is better)
Translates to: FEIRGCFYLLEV*ASLAVPASLAL
Trigger: TAAAGCTAAGGAAGCAGGAACTGCTAGAGATGCTCAAACCTCTAGAAGATAAAAACAACCTCTTATTTCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359454.10
ENST00000389594.7
ENST00000411796.6
ENST00000432289.5
ENST00000636229.1
ENST00000641281.1
ENST00000641536.1
ENST00000641713.1
ENST00000641761.1
ENST00000641812.1