Pregenerated sensors for CCDC194 (Homo sapiens)
Ensembl gene IDs: ENSG00000269720Ensembl transcript IDs: ENST00000597169.1, ENST00000636079.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCCGAGGCGGCCAGATTCCAGGCTACCAGGGCCCCGCCGGCTGCTaGCGCAGCCAGGAACACGGCCACCCCGCACAGGGCGAGCACCCG | + |
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Preference number: 5 (lower is better) Translates to: SRGGQIPGYQGPAGC*RSQEHGHPAQGEHP Trigger: CGGGTGCTCGCCCTGTGCGGGGTGGCCGTGTTCCTGGCTGCGGCAGCAGCCGGCGGGGCCCTGGTAGCCTGGAATCTGGCCGCCTCGGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636079.1 |
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| CDS GCA 90 bp | AGCAGCCGAGGCGGCCAGATTCCAGGCTACCAGGGCCCCGCCGGCTaGTGCCGCAGCCAGGAACACGGCCACCCCGCACAGGGCGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: SSRGGQIPGYQGPAG*CRSQEHGHPAQGEH Trigger: GTGCTCGCCCTGTGCGGGGTGGCCGTGTTCCTGGCTGCGGCAGCAGCCGGCGGGGCCCTGGTAGCCTGGAATCTGGCCGCCTCGGCTGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636079.1 |
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| CDS GCA 90 bp | AATGCCTTCTCCAACTCGTGCCGGATACTTTCCGCCTGGTCCAGCTaGCTGGCTAGGGCCTCCTCCCGCTCGGCAGCCTCTGCCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: NAFSNSCRILSAWSS*LARASSRSAASASR Trigger: CCGGCTGGCAGAGGCTGCCGAGCGGGAGGAGGCCCTAGCCAGGCAGCTGGACCAGGCGGAAAGTATCCGGCACGAGTTGGAGAAGGCATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636079.1 |
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| CDS GCA 90 bp | CGGCTCTGGCGGCCTTCACAGGCCTTTAATGCCTTCTCCAACTCGTaGCGGATACTTTCCGCCTGGTCCAGCTGCCTGGCTAGGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RLWRPSQAFNAFSNS*RILSAWSSCLARAS Trigger: GGAGGCCCTAGCCAGGCAGCTGGACCAGGCGGAAAGTATCCGGCACGAGTTGGAGAAGGCATTAAAGGCCTGTGAAGGCCGCCAGAGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636079.1 |
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| CDS CCA 90 bp | CAATCTTCAGTGTCGTTAGTTGGGTCTGAAGCCGGCTCTGAGGAGTaGAGGGGAAGTGGGAGGGGGTGTAGGCAGAGGAGAGGAGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: QSSVSLVGSEAGSEE*RGSGRGCRQRRGGV Trigger: CACTCCTCCTCTCCTCTGCCTACACCCCCTCCCACTTCCCCTCCACTCCTCAGAGCCGGCTTCAGACCCAACTAACGACACTGAAGATTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS CCA 90 bp | GGGACAGTGAGAAGCCACCTGCGACCCTGTGTCCTGAGCTTTGTGTaGAATGTCCTTTGGGGCCTTGTAGTTGTAAAATACAGAAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: GTVRSHLRPCVLSFV*NVLWGLVVVKYRSG Trigger: GCCACTTCTGTATTTTACAACTACAAGGCCCCAAAGGACATTCCACACAAAGCTCAGGACACAGGGTCGCAGGTGGCTTCTCACTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS GCA 90 bp | GCTTTCGTGAGTCGTTTACAAGGAGTTTGCATGTTTTGTGGCATTTaGCTTGTTTTTGTGACATTTGCATGGCCTCTGCATGTTGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: AFVSRLQGVCMFCGI*LVFVTFAWPLHVVC Trigger: GCAAACAACATGCAGAGGCCATGCAAATGTCACAAAAACAAGGCAAATGCCACAAAACATGCAAACTCCTTGTAAACGACTCACGAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS CCA 90 bp | GTTTATATCCGTGTTATTTGCATTACGTTTGCAACTGTGCTTGTTTaGATAACTAGGATTCACCTAGGCTCCTCCCACTTCTATCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: VYIRVICITFATVLV*ITRIHLGSSHFYPC Trigger: GCAGGGATAGAAGTGGGAGGAGCCTAGGTGAATCCTAGTTATCCAAACAAGCACAGTTGCAAACGTAATGCAAATAACACGGATATAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS CCA 90 bp | TTGCATTGCTTTCGTGAGTCGTTTACAAGGAGTTTGCATGTTTTGTaGCATTTGCCTTGTTTTTGTGACATTTGCATGGCCTCTGCATGT | + |
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Preference number: 5 (lower is better) Translates to: LHCFRESFTRSLHVL*HLPCFCDICMASAC Trigger: ACATGCAGAGGCCATGCAAATGTCACAAAAACAAGGCAAATGCCACAAAACATGCAAACTCCTTGTAAACGACTCACGAAAGCAATGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS GCA 72 bp | GGCCAGATTCCAGGCTACCAGGGCCCCGCCGGCTGCTaGCGCAGCCAGGAACACGGCCACCCCGCACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GQIPGYQGPAGC*RSQEHGHPAQG Trigger: GCCCTGTGCGGGGTGGCCGTGTTCCTGGCTGCGGCAGCAGCCGGCGGGGCCCTGGTAGCCTGGAATCTGGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636079.1 |
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| CDS TCA 72 bp | GCCACCAACCCTAAGCCACCAGAAAGTGGAGAGTGCTaGGCTCTGCGGTCAGATTCAAGTTCCACTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ATNPKPPESGEC*ALRSDSSSTFS Trigger: GCTGAAAGTGGAACTTGAATCTGACCGCAGAGCTCAGCACTCTCCACTTTCTGGTGGCTTAGGGTTGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS CCA 72 bp | AGAAGCCACCTGCGACCCTGTGTCCTGAGCTTTGTGTaGAATGTCCTTTGGGGCCTTGTAGTTGTAAAATAC | + |
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Preference number: 6 (lower is better) Translates to: RSHLRPCVLSFV*NVLWGLVVVKY Trigger: GTATTTTACAACTACAAGGCCCCAAAGGACATTCCACACAAAGCTCAGGACACAGGGTCGCAGGTGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS CCA 72 bp | CGACCCTGTGTCCTGAGCTTTGTGTGGAATGTCCTTTaGGGCCTTGTAGTTGTAAAATACAGAAGTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RPCVLSFVWNVL*GLVVVKYRSGF Trigger: GAAGCCACTTCTGTATTTTACAACTACAAGGCCCCAAAGGACATTCCACACAAAGCTCAGGACACAGGGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS CAA 72 bp | GCGACCCTGTGTCCTGAGCTTTGTGTGGAATGTCCTTaGGGGCCTTGTAGTTGTAAAATACAGAAGTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: ATLCPELCVECP*GPCSCKIQKWL Trigger: AAGCCACTTCTGTATTTTACAACTACAAGGCCCCAAAGGACATTCCACACAAAGCTCAGGACACAGGGTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS CAA 90 bp | GGTTTGCATTGCTTTCGTGAGTCGTTTACAAGGAGTTTGCATGTTTaGTGGCATTTGCCTTGTTTTTGTGACATTTGCATGGCCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GLHCFRESFTRSLHV*WHLPCFCDICMASA Trigger: TGCAGAGGCCATGCAAATGTCACAAAAACAAGGCAAATGCCACAAAACATGCAAACTCCTTGTAAACGACTCACGAAAGCAATGCAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS CAA 72 bp | GAGTCGTTTACAAGGAGTTTGCATGTTTTGTGGCATTaGCCTTGTTTTTGTGACATTTGCATGGCCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ESFTRSLHVLWH*PCFCDICMASA Trigger: TGCAGAGGCCATGCAAATGTCACAAAAACAAGGCAAATGCCACAAAACATGCAAACTCCTTGTAAACGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS CAA 90 bp | TGCTTTCGTGAGTCGTTTACAAGGAGTTTGCATGTTTTGTGGCATTaGCCTTGTTTTTGTGACATTTGCATGGCCTCTGCATGTTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: CFRESFTRSLHVLWH*PCFCDICMASACCL Trigger: CAAACAACATGCAGAGGCCATGCAAATGTCACAAAAACAAGGCAAATGCCACAAAACATGCAAACTCCTTGTAAACGACTCACGAAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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| CDS CAA 90 bp | ATTTGCATGGCCTCTGCATGTTGTTTGCATTCTTTTCATAAGTTTTaGCGTTTATATCCGTGTTATTTGCATTACGTTTGCAACTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ICMASACCLHSFHKF*RLYPCYLHYVCNCA Trigger: AGCACAGTTGCAAACGTAATGCAAATAACACGGATATAAACGCAAAAACTTATGAAAAGAATGCAAACAACATGCAGAGGCCATGCAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597169.1 |
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