Pregenerated sensors for CCDC192 (Homo sapiens)
Ensembl gene IDs: ENSG00000230561Ensembl transcript IDs: ENST00000506670.1, ENST00000513708.1, ENST00000514853.5
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGCTCCGGTCCACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGTTTCATCTCACTGGC | + |
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Preference number: 5 (lower is better) Translates to: QLRSTAPSVSDAEDG*FLHFHLRYRFHLTG Trigger: GCCAGTGAGATGAAACCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTGGACCGGAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS GCA 90 bp | TGCTGCTTCTCTCTGAGGTGTCAGACTCTGGGACCACAGATTTCTTaGTATAGCATTGTCCCATCTCAAGCCAGACCCACTGGGATCCCC | + |
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Preference number: 5 (lower is better) Translates to: CCFSLRCQTLGPQIS*YSIVPSQARPTGIP Trigger: GGGGATCCCAGTGGGTCTGGCTTGAGATGGGACAATGCTATAGCAAGAAATCTGTGGTCCCAGAGTCTGACACCTCAGAGAGAAGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514853.5 |
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| CDS CCA 90 bp | GCCTTTTCTTCTGCTTCTTTCAGGCAAATCTCCAAGGACTCAAGTTaGGCCAAGGTAAACGCCATCTGTCCAGTATCCAGGGACGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: AFSSASFRQISKDSS*AKVNAICPVSRDAF Trigger: GAAAGCGTCCCTGGATACTGGACAGATGGCGTTTACCTTGGCCCAACTTGAGTCCTTGGAGATTTGCCTGAAAGAAGCAGAAGAAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514853.5 |
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| CDS TCA 90 bp | AGGAGCTCCTTCCCAAGCATTCTTCGCAGCCAAGGTGTAGTTATGTaGCTTAGACTCCACCAAGTCAGACACACCAGCATGAAACTTCAA | + |
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Preference number: 5 (lower is better) Translates to: RSSFPSILRSQGVVM*LRLHQVRHTSMKLQ Trigger: TTGAAGTTTCATGCTGGTGTGTCTGACTTGGTGGAGTCTAAGTCACATAACTACACCTTGGCTGCGAAGAATGCTTGGGAAGGAGCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS TCA 90 bp | TTGGGAATCTACAAATTCTCATCAGAGACCACAGGTGGGATGTCATaGGTAGAGAAAACTGGGGCTTCTGGTAAACATCCTGGAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LGIYKFSSETTGGMS*VEKTGASGKHPGGS Trigger: GGACCCTCCAGGATGTTTACCAGAAGCCCCAGTTTTCTCTACTCATGACATCCCACCTGTGGTCTCTGATGAGAATTTGTAGATTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000513708.1 ENST00000514853.5 |
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| CDS GCA 90 bp | ATCTGTAAAATGAGAACACCATTGTACCTCATTCAACTTGACCTCTaGACTGGCCATTTGGCAAGCTGTTTTGACTGCCCAGTGTCGTTC | + |
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Preference number: 5 (lower is better) Translates to: ICKMRTPLYLIQLDL*TGHLASCFDCPVSF Trigger: GAACGACACTGGGCAGTCAAAACAGCTTGCCAAATGGCCAGTGCAGAGGTCAAGTTGAATGAGGTACAATGGTGTTCTCATTTTACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS CCA 72 bp | GCTTCTGGTAAACATCCTGGAGGGTCCTTGACCTCTTaGGGAGGATGGGGACTCCGCTCAGCTTCCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ASGKHPGGSLTS*GGWGLRSASSC Trigger: GCAGCTGGAAGCTGAGCGGAGTCCCCATCCTCCCCAAGAGGTCAAGGACCCTCCAGGATGTTTACCAGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513708.1 ENST00000514853.5 |
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| CDS TCA 72 bp | CCGAATAGGAACAGCTCCGGTCCACAGCTCCCAGCGTaGGCGACGCAGAAGACGGGTGATTTCTGCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: PNRNSSGPQLPA*ATQKTGDFCIS Trigger: GGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTGGACCGGAGCTGTTCCTATTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS TCA 72 bp | GCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTaGGGTACCGGTTTCATCTCACTGGCTCGGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: ATQKTGDFCISI*GTGFISLARRV Trigger: GACCCTCCGAGCCAGTGAGATGAAACCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS TCA 72 bp | TCCACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: STAPSVSDAEDG*FLHFHLRYRFH Trigger: ATGAAACCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS CAA 72 bp | GTCAGACTCTGGGACCACAGATTTCTTGCTATAGCATaGTCCCATCTCAAGCCAGACCCACTGGGATCCCCT | + |
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Preference number: 6 (lower is better) Translates to: VRLWDHRFLAIA*SHLKPDPLGSP Trigger: AGGGGATCCCAGTGGGTCTGGCTTGAGATGGGACAATGCTATAGCAAGAAATCTGTGGTCCCAGAGTCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514853.5 |
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| CDS GCA 72 bp | TCTCTGAGGTGTCAGACTCTGGGACCACAGATTTCTTaGTATAGCATTGTCCCATCTCAAGCCAGACCCACT | + |
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Preference number: 6 (lower is better) Translates to: SLRCQTLGPQIS*YSIVPSQARPT Trigger: AGTGGGTCTGGCTTGAGATGGGACAATGCTATAGCAAGAAATCTGTGGTCCCAGAGTCTGACACCTCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514853.5 |
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| CDS CCA 72 bp | TGTACCTCATTCAACTTGACCTCTGCACTGGCCATTTaGCAAGCTGTTTTGACTGCCCAGTGTCGTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: CTSFNLTSALAI*QAVLTAQCRSL Trigger: CAGAGAACGACACTGGGCAGTCAAAACAGCTTGCCAAATGGCCAGTGCAGAGGTCAAGTTGAATGAGGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS CAA 90 bp | AGCCTTTTCTTCTGCTTCTTTCAGGCAAATCTCCAAGGACTCAAGTaGGGCCAAGGTAAACGCCATCTGTCCAGTATCCAGGGACGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLFFCFFQANLQGLK*GQGKRHLSSIQGRF Trigger: AAAGCGTCCCTGGATACTGGACAGATGGCGTTTACCTTGGCCCAACTTGAGTCCTTGGAGATTTGCCTGAAAGAAGCAGAAGAAAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514853.5 |
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| CDS TCA 72 bp | TGTGACTTAGACTCCACCAAGTCAGACACACCAGCATaGAACTTCAATGTGGAGATGCAGGAGCCAAGATGG | + |
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Preference number: 6 (lower is better) Translates to: CDLDSTKSDTPA*NFNVEMQEPRW Trigger: CCATCTTGGCTCCTGCATCTCCACATTGAAGTTTCATGCTGGTGTGTCTGACTTGGTGGAGTCTAAGTCACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS TCA 72 bp | TTCCCAAGCATTCTTCGCAGCCAAGGTGTAGTTATGTaGCTTAGACTCCACCAAGTCAGACACACCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: FPSILRSQGVVM*LRLHQVRHTSM Trigger: CATGCTGGTGTGTCTGACTTGGTGGAGTCTAAGTCACATAACTACACCTTGGCTGCGAAGAATGCTTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS CAA 72 bp | TTCTGCTTCTTTCAGGCAAATCTCCAAGGACTCAAGTaGGGCCAAGGTAAACGCCATCTGTCCAGTATCCAG | + |
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Preference number: 6 (lower is better) Translates to: FCFFQANLQGLK*GQGKRHLSSIQ Trigger: CTGGATACTGGACAGATGGCGTTTACCTTGGCCCAACTTGAGTCCTTGGAGATTTGCCTGAAAGAAGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514853.5 |
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| CDS CAA 90 bp | AGAACACCATTGTACCTCATTCAACTTGACCTCTGCACTGGCCATTaGGCAAGCTGTTTTGACTGCCCAGTGTCGTTCTCTGTTTGGATA | + |
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Preference number: 6 (lower is better) Translates to: RTPLYLIQLDLCTGH*ASCFDCPVSFSVWI Trigger: TATCCAAACAGAGAACGACACTGGGCAGTCAAAACAGCTTGCCAAATGGCCAGTGCAGAGGTCAAGTTGAATGAGGTACAATGGTGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS GCA 72 bp | ATGAGAACACCATTGTACCTCATTCAACTTGACCTCTaGACTGGCCATTTGGCAAGCTGTTTTGACTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: MRTPLYLIQLDL*TGHLASCFDCP Trigger: TGGGCAGTCAAAACAGCTTGCCAAATGGCCAGTGCAGAGGTCAAGTTGAATGAGGTACAATGGTGTTCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS TCA 72 bp | TACAAATTCTCATCAGAGACCACAGGTGGGATGTCATaGGTAGAGAAAACTGGGGCTTCTGGTAAACATCCT | + |
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Preference number: 6 (lower is better) Translates to: YKFSSETTGGMS*VEKTGASGKHP Trigger: AGGATGTTTACCAGAAGCCCCAGTTTTCTCTACTCATGACATCCCACCTGTGGTCTCTGATGAGAATTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000513708.1 ENST00000514853.5 |
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| CDS CAA 90 bp | CAGCCTCCAGTTTTTCCTCCAGCCGGGATACTTGTTCAAGCAGTTTaGATTTTGTTCCTTCAGAGACTGAAAGCTGTTCAGATAAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: QPPVFPPAGILVQAV*ILFLQRLKAVQIKL Trigger: AAGCTTTATCTGAACAGCTTTCAGTCTCTGAAGGAACAAAATCAAAACTGCTTGAACAAGTATCCCGGCTGGAGGAAAAACTGGAGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000514853.5 |
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| CDS CAA 90 bp | TCTCTAGGGGCTGGCTTTCCTTCATATAGAGTCTTTATCTTCTCATaGAGTTCCAGAACTGTGATGGCATTAGCTGTTGCCAAATCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SLGAGFPSYRVFIFS*SSRTVMALAVAKSV Trigger: GACTGATTTGGCAACAGCTAATGCCATCACAGTTCTGGAACTCAATGAGAAGATAAAGACTCTATATGAAGGAAAGCCAGCCCCTAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514853.5 |
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| CDS CAA 72 bp | GCTGGCTTTCCTTCATATAGAGTCTTTATCTTCTCATaGAGTTCCAGAACTGTGATGGCATTAGCTGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: AGFPSYRVFIFS*SSRTVMALAVA Trigger: GGCAACAGCTAATGCCATCACAGTTCTGGAACTCAATGAGAAGATAAAGACTCTATATGAAGGAAAGCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514853.5 |
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| CDS CCA 72 bp | GCAAGCTGTTTTGACTGCCCAGTGTCGTTCTCTGTTTaGATAATTTCCCATCTCATAAATCCTATCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: ASCFDCPVSFSV*IISHLINPIFQ Trigger: TTGGAAGATAGGATTTATGAGATGGGAAATTATCCAAACAGAGAACGACACTGGGCAGTCAAAACAGCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506670.1 |
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| CDS CAA 72 bp | TTTGATTTCTTTATGGGTGCCACCAAAAAGTATGCATaGAACAGAGAAATGCTGAGAAGCACTGATCTAATT | + |
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Preference number: 6 (lower is better) Translates to: FDFFMGATKKYA*NREMLRSTDLI Trigger: AATTAGATCAGTGCTTCTCAGCATTTCTCTGTTCAATGCATACTTTTTGGTGGCACCCATAAAGAAATCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000513708.1 |
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