RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC187 (Homo sapiens)

Ensembl gene IDs: ENSG00000260220

Ensembl transcript IDs: ENST00000563590.2, ENST00000565954.1, ENST00000569961.5, ENST00000624277.3, ENST00000638797.2

Found 1171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAGGCTGCCGGGGCTaGCAACCAGGGACATGGAGGTGTGGCTGCCTGTGGGGGTGTGGC +
Preference number: 1 (lower is better)
Translates to: TGGQGHLAWERGCRG*QPGTWRCGCLWGCG
Trigger: GCCACACCCCCACAGGCAGCCACACCTCCATGTCCCTGGTTGGCAGCCCCGGCAGCCTCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp CAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTaGTGGGTCCCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAA +
Preference number: 1 (lower is better)
Translates to: QPTPARGPQAQGFSS*WVPWAPGSGHCSLE
Trigger: TTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGGGACCCAGCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR CCA 90 bp CCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCTaGGTCCCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACC +
Preference number: 1 (lower is better)
Translates to: PTPARGPQAQGFSSC*VPWAPGSGHCSLET
Trigger: GGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGGGACCCAGCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR GCA 90 bp CCCCCTTCAAGGGCACCCTACCACCTGCCAGCGACGCGAGGCACCTaGTGGGCTCCCAGGGAAAGTCACGCTGGTTCCAGCTGTGACTGC +
Preference number: 1 (lower is better)
Translates to: PPSRAPYHLPATRGT*WAPRESHAGSSCDC
Trigger: GCAGTCACAGCTGGAACCAGCGTGACTTTCCCTGGGAGCCCAGCAGGTGCCTCGCGTCGCTGGCAGGTGGTAGGGTGCCCTTGAAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp GCAGGTGAGGCAGTGTCCAGGAGCTCATCCAGACCCACTAAGAGCTaGCCCGCTACCCACCCCGGCTCTCTGCATGCCCAGAGCTCTGCG +
Preference number: 1 (lower is better)
Translates to: AGEAVSRSSSRPTKS*PATHPGSLHAQSSA
Trigger: CGCAGAGCTCTGGGCATGCAGAGAGCCGGGGTGGGTAGCGGGGCAGCTCTTAGTGGGTCTGGATGAGCTCCTGGACACTGCCTCACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp ACCTGCTGGGCTCCCAGGGAAAGTCACGCTGGTTCCAGCTGTGACTaGAGCCGCCACCGCATTGCGCCGCACGTCAGCACCAACCACGTG +
Preference number: 1 (lower is better)
Translates to: TCWAPRESHAGSSCD*SRHRIAPHVSTNHV
Trigger: CACGTGGTTGGTGCTGACGTGCGGCGCAATGCGGTGGCGGCTGCAGTCACAGCTGGAACCAGCGTGACTTTCCCTGGGAGCCCAGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp CGTCCACGTGTCCCTCCTCTGGAAAACCTTGGAGAAGAGGGCACCTaGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCA +
Preference number: 1 (lower is better)
Translates to: RPRVPPLENLGEEGT*LHSLVSREHGTGDP
Trigger: TGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAAGGTTTTCCAGAGGAGGGACACGTGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR CCA 90 bp GCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCTGGGTCCCTTaGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAA +
Preference number: 1 (lower is better)
Translates to: ARGPQAQGFSSCWVP*APGSGHCSLETPDE
Trigger: TTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGGGACCCAGCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR CCA 90 bp CTGCCTCCGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTaGTCGTCAACGCTTCCACCCGGACCAGCCACCCCTGGGCAGAGC +
Preference number: 1 (lower is better)
Translates to: LPPASSPAAELHLPN*SSTLPPGPATPGQS
Trigger: GCTCTGCCCAGGGGTGGCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp CCCTCACACGACGAGTGCCCTGGCCAGCTGACAGGTTCAGGCCACTaGCTGCCTCCGGCCTCATCCCCTGCTGCAGAACTGCATCTACCC +
Preference number: 1 (lower is better)
Translates to: PSHDECPGQLTGSGH*LPPASSPAAELHLP
Trigger: GGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCGGAGGCAGCCAGTGGCCTGAACCTGTCAGCTGGCCAGGGCACTCGTCGTGTGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp CCTCAACGTCCTCACCAGCATGCTCAAGGGACCCAGACTTTCCACTaGCGGCCAAGGGCACTTGGCCTGGGAGAGAGGCTGCCGGGGCTG +
Preference number: 1 (lower is better)
Translates to: PQRPHQHAQGTQTFH*RPRALGLGERLPGL
Trigger: CAGCCCCGGCAGCCTCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAGCATGCTGGTGAGGACGTTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp ACTGCAGCCGCCACCGCATTGCGCCGCACGTCAGCACCAACCACGTaGCAGCGAGCCTGGGAGCCATCAGATTCGCTGCAAATCTGCGGG +
Preference number: 1 (lower is better)
Translates to: TAAATALRRTSAPTT*QRAWEPSDSLQICG
Trigger: CCCGCAGATTTGCAGCGAATCTGATGGCTCCCAGGCTCGCTGCCACGTGGTTGGTGCTGACGTGCGGCGCAATGCGGTGGCGGCTGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 90 bp TGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTaGGACATCCATGCCCAGTCCACCCAGCTGCACGTCATGTGCCGG +
Preference number: 1 (lower is better)
Translates to: WALEPWLPLVCAAQV*DIHAQSTQLHVMCR
Trigger: CCGGCACATGACGTGCAGCTGGGTGGACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAAGGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 90 bp AAAGCCCCCGGCCGTGCGGGCTGCGCAGAAATGACCTTGGGCCCTTaGGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACAT +
Preference number: 1 (lower is better)
Translates to: KAPGRAGCAEMTLGP*AVASSGLCSSGVRH
Trigger: ATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCACGGCCGGGGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp GTTCAGGCCACTGGCTGCCTCCGGCCTCATCCCCTGCTGCAGAACTaGATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCCA +
Preference number: 1 (lower is better)
Translates to: VQATGCLRPHPLLQN*IYPTGRQRFHPDQP
Trigger: TGGCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCGGAGGCAGCCAGTGGCCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp GCTGACAGGTTCAGGCCACTGGCTGCCTCCGGCCTCATCCCCTGCTaGAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGG +
Preference number: 1 (lower is better)
Translates to: ADRFRPLAASGLIPC*RTASTQLVVNASTR
Trigger: CCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCGGAGGCAGCCAGTGGCCTGAACCTGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp TTTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTaGAGTCCGGGCCTGGCTTCAGGTGACCGTCCCGCGGAGCCGGCG +
Preference number: 1 (lower is better)
Translates to: FSWTPLRGFDAKKQV*SPGLASGDRPAEPA
Trigger: CGCCGGCTCCGCGGGACGGTCACCTGAAGCCAGGCCCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp CGCAGGACCCTCCTGGTGAGCCACGTGGAGACCAAGTCCACTGCCTaGTCTCTCTCCACACCTGGGAGATGGGTACAGCGGCCTGAGTCT +
Preference number: 1 (lower is better)
Translates to: RRTLLVSHVETKSTA*SLSTPGRWVQRPES
Trigger: AGACTCAGGCCGCTGTACCCATCTCCCAGGTGTGGAGAGAGACCAGGCAGTGGACTTGGTCTCCACGTGGCTCACCAGGAGGGTCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp ACCGCATTGCGCCGCACGTCAGCACCAACCACGTGGCAGCGAGCCTaGGAGCCATCAGATTCGCTGCAAATCTGCGGGGCTTCAGTGGTG +
Preference number: 1 (lower is better)
Translates to: TALRRTSAPTTWQRA*EPSDSLQICGASVV
Trigger: CACCACTGAAGCCCCGCAGATTTGCAGCGAATCTGATGGCTCCCAGGCTCGCTGCCACGTGGTTGGTGCTGACGTGCGGCGCAATGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp CCAGCTGACAGGTTCAGGCCACTGGCTGCCTCCGGCCTCATCCCCTaGTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACC +
Preference number: 1 (lower is better)
Translates to: PADRFRPLAASGLIP*CRTASTQLVVNAST
Trigger: GGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCGGAGGCAGCCAGTGGCCTGAACCTGTCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATaGCCAGTCCACCCAGCTGCACGTCATGTGCCGGCAGTTTGGGTG +
Preference number: 1 (lower is better)
Translates to: AVASSGLCSSGVRHP*PVHPAARHVPAVWV
Trigger: CACCCAAACTGCCGGCACATGACGTGCAGCTGGGTGGACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp AAAGGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTaGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: KGFLYPVGPSSSARQ*KVFSVDAPATRPAS
Trigger: GCTGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR CCA 90 bp TCACTTCCACGTCACCAGCTGCCAACAGCCCTGACAGACCTTCCCTaGCCACAGAGGCCACTCTGGATGGAGCTGGGGGCTGCACTGATG +
Preference number: 1 (lower is better)
Translates to: SLPRHQLPTALTDLP*PQRPLWMELGAALM
Trigger: CATCAGTGCAGCCCCCAGCTCCATCCAGAGTGGCCTCTGTGGCCAGGGAAGGTCTGTCAGGGCTGTTGGCAGCTGGTGACGTGGAAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp GTGGAGACCAAGTCCACTGCCTGGTCTCTCTCCACACCTGGGAGATaGGTACAGCGGCCTGAGTCTGTCTCCAGGAGCGGCTTTCTGCCC +
Preference number: 1 (lower is better)
Translates to: VETKSTAWSLSTPGR*VQRPESVSRSGFLP
Trigger: GGGCAGAAAGCCGCTCCTGGAGACAGACTCAGGCCGCTGTACCCATCTCCCAGGTGTGGAGAGAGACCAGGCAGTGGACTTGGTCTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp GGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTaGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCCACCC +
Preference number: 1 (lower is better)
Translates to: GLRRNDLGPLSRGFL*SVQLRCETSMPSPP
Trigger: GGGTGGACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 90 bp CCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTaGGCCACGTGGAGACCAAGTCCACTGCCTGGTCTCTCTCCACAC +
Preference number: 1 (lower is better)
Translates to: PVWRELLRSHAGPSW*ATWRPSPLPGLSPH
Trigger: GTGTGGAGAGAGACCAGGCAGTGGACTTGGTCTCCACGTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 90 bp ATAGGCGCTGCTCCGCCCCGTCCTCGTTCCTGCTCTTGGCGACTCTaGCTGTTCTTGCCTCTGGGCTGCAACGCCTTTTCTTGGACGCCT +
Preference number: 1 (lower is better)
Translates to: IGAAPPRPRSCSWRL*LFLPLGCNAFSWTP
Trigger: AGGCGTCCAAGAAAAGGCGTTGCAGCCCAGAGGCAAGAACAGTCAGAGTCGCCAAGAGCAGGAACGAGGACGGGGCGGAGCAGCGCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp CTCCGCCCCGTCCTCGTTCCTGCTCTTGGCGACTCTGACTGTTCTTaGCTCTGGGCTGCAACGCCTTTTCTTGGACGCCTCTTCGTGGCT +
Preference number: 1 (lower is better)
Translates to: LRPVLVPALGDSDCS*LWAATPFLGRLFVA
Trigger: AGCCACGAAGAGGCGTCCAAGAAAAGGCGTTGCAGCCCAGAGGCAAGAACAGTCAGAGTCGCCAAGAGCAGGAACGAGGACGGGGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp TGCCCAGTCCACCCAGCTGCACGTCATGTGCCGGCAGTTTGGGTGTaGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTC +
Preference number: 1 (lower is better)
Translates to: CPVHPAARHVPAVWV*EEPPKSKQADAPDF
Trigger: GAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGACGTGCAGCTGGGTGGACTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp CATCCATGCCCAGTCCACCCAGCTGCACGTCATGTGCCGGCAGTTTaGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCT +
Preference number: 1 (lower is better)
Translates to: HPCPVHPAARHVPAV*VWEEPPKSKQADAP
Trigger: AGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGACGTGCAGCTGGGTGGACTGGGCATGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp TCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCCACCCAGCTaGACGTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAA +
Preference number: 1 (lower is better)
Translates to: SVQLRCETSMPSPPS*TSCAGSLGVGGASK
Trigger: TTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGACGTGCAGCTGGGTGGACTGGGCATGGATGTCTCACACCTGAGCTGCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp AGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGTaGGCTGGGCACAGCGGCACGGGGCATGGCTGTCATGAAATAAGC +
Preference number: 1 (lower is better)
Translates to: SRIRADGTVRKRPRR*AGHSGTGHGCHEIS
Trigger: GCTTATTTCATGACAGCCATGCCCCGTGCCGCTGTGCCCAGCCCACCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR CCA 90 bp AGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTGTGACCTaGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCAC +
Preference number: 1 (lower is better)
Translates to: SYGVEGLGSSVCPVT*HLRALPRQLCDASH
Trigger: GTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCACAGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 90 bp TTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTaGCTTCTAAGCAGGGCTCAGGGGTGTGAGTCAGCACCAGTCAGG +
Preference number: 1 (lower is better)
Translates to: LGVGGASKVKAGRCP*LLSRAQGCESAPVR
Trigger: CCTGACTGGTGCTGACTCACACCCCTGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp ACCACGTGGCAGCGAGCCTGGGAGCCATCAGATTCGCTGCAAATCTaGGGGGCTTCAGTGGTGGAGATTTATCGTCATGCCAGATGCGTG +
Preference number: 1 (lower is better)
Translates to: TTWQRAWEPSDSLQI*GASVVEIYRHARCV
Trigger: CACGCATCTGGCATGACGATAAATCTCCACCACTGAAGCCCCGCAGATTTGCAGCGAATCTGATGGCTCCCAGGCTCGCTGCCACGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp CTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAAAACCTTaGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCA +
Preference number: 1 (lower is better)
Translates to: LLSGFTSTCPSSGKP*RRGHLASLPGQPGA
Trigger: TGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAAGGTTTTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR CCA 90 bp CCCGTCCTCGTTCCTGCTCTTGGCGACTCTGACTGTTCTTGCCTCTaGGCTGCAACGCCTTTTCTTGGACGCCTCTTCGTGGCTTTGATG +
Preference number: 1 (lower is better)
Translates to: PVLVPALGDSDCSCL*AATPFLGRLFVALM
Trigger: CATCAAAGCCACGAAGAGGCGTCCAAGAAAAGGCGTTGCAGCCCAGAGGCAAGAACAGTCAGAGTCGCCAAGAGCAGGAACGAGGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp CTGAGGCCCTGGACAGGAGAAGCCACATCCTGGAAGGATCAGTGCTaGGACACAGATGTCCCTAAGGCCAACACGCTGCTCATCAACTCC +
Preference number: 1 (lower is better)
Translates to: LRPWTGEATSWKDQC*DTDVPKANTLLINS
Trigger: GGAGTTGATGAGCAGCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGGCTTCTCCTGTCCAGGGCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp CACTGGATCCAAACATCTGCATTCTCAGGTGGGCTGGGCAGGAGCTaGTGCAAAATCAGATGCATGGCCCGAGCTGGGCTTCCTGTGCAC +
Preference number: 1 (lower is better)
Translates to: HWIQTSAFSGGLGRS*CKIRCMARAGLPVH
Trigger: GTGCACAGGAAGCCCAGCTCGGGCCATGCATCTGATTTTGCACCAGCTCCTGCCCAGCCCACCTGAGAATGCAGATGTTTGGATCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp TGGATCCAAACATCTGCATTCTCAGGTGGGCTGGGCAGGAGCTGGTaGAAAATCAGATGCATGGCCCGAGCTGGGCTTCCTGTGCACATG +
Preference number: 1 (lower is better)
Translates to: WIQTSAFSGGLGRSW*KIRCMARAGLPVHM
Trigger: CATGTGCACAGGAAGCCCAGCTCGGGCCATGCATCTGATTTTGCACCAGCTCCTGCCCAGCCCACCTGAGAATGCAGATGTTTGGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp AACACATTCCCCACTGGATCCAAACATCTGCATTCTCAGGTGGGCTaGGCAGGAGCTGGTGCAAAATCAGATGCATGGCCCGAGCTGGGC +
Preference number: 1 (lower is better)
Translates to: NTFPTGSKHLHSQVG*AGAGAKSDAWPELG
Trigger: GCCCAGCTCGGGCCATGCATCTGATTTTGCACCAGCTCCTGCCCAGCCCACCTGAGAATGCAGATGTTTGGATCCAGTGGGGAATGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp GCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCTCAGGTaGGCTGGGCAGGAGCTGGTGCAAAATCAGATGCATGGCCCGAGC +
Preference number: 1 (lower is better)
Translates to: AGTHSPLDPNICILR*AGQELVQNQMHGPS
Trigger: GCTCGGGCCATGCATCTGATTTTGCACCAGCTCCTGCCCAGCCCACCTGAGAATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp AGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGACTGCATaGATAAAGTCTGGAGTATGCTCCTCTCTGAAGTGGAGGAGGCCT +
Preference number: 1 (lower is better)
Translates to: RALPRQLCDASHQTA*IKSGVCSSLKWRRP
Trigger: AGGCCTCCTCCACTTCAGAGAGGAGCATACTCCAGACTTTATGCATGCAGTCTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp TCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTaGAAAACCTTGGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCA +
Preference number: 1 (lower is better)
Translates to: SLQPFVWFHVHVSLL*KTLEKRAPGFTPWS
Trigger: TGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAAGGTTTTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR CCA 90 bp CACCAGACTGCATGCATAAAGTCTGGAGTATGCTCCTCTCTGAAGTaGAGGAGGCCTGAGGCCCTGGACAGGAGAAGCCACATCCTGGAA +
Preference number: 1 (lower is better)
Translates to: HQTACIKSGVCSSLK*RRPEALDRRSHILE
Trigger: TTCCAGGATGTGGCTTCTCCTGTCCAGGGCCTCAGGCCTCCTCCACTTCAGAGAGGAGCATACTCCAGACTTTATGCATGCAGTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 90 bp CCCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATaGAAACACTCAGTAGCAGAAGAAAAAGTCGAATCCGAGCTGATG +
Preference number: 1 (lower is better)
Translates to: PLGTRQWALLVGNPG*KHSVAEEKVESELM
Trigger: CATCAGCTCGGATTCGACTTTTTCTTCTGCTACTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR GCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTaGATGTGTATGCCACACACAGCTCACAATGACATTGTGGACGCC +
Preference number: 1 (lower is better)
Translates to: STLGKSRPLGSYSHV*MCMPHTAHNDIVDA
Trigger: GGCGTCCACAATGTCATTGTGAGCTGTGTGTGGCATACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp TCCTCTGGAAGCAAAGAAAAGTCCATGGCACCAGGAGAAATCAGCTaGCCTGGCCTTCCAGGCACAGCAAGTCCTGAGCATGCTCCAGAA +
Preference number: 1 (lower is better)
Translates to: SSGSKEKSMAPGEIS*PGLPGTASPEHAPE
Trigger: TTCTGGAGCATGCTCAGGACTTGCTGTGCCTGGAAGGCCAGGGCAGCTGATTTCTCCTGGTGCCATGGACTTTTCTTTGCTTCCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 90 bp GTTTGTTCTGAAATTGGGAGCATGGAGCAGGAACACATTCCCCACTaGATCCAAACATCTGCATTCTCAGGTGGGCTGGGCAGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: VCSEIGSMEQEHIPH*IQTSAFSGGLGRSW
Trigger: CCAGCTCCTGCCCAGCCCACCTGAGAATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATTTCAGAACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp GGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCTaGTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAAAAG +
Preference number: 1 (lower is better)
Translates to: GRISAGTQMSLRPTR*SSTPHSRRDPQIQK
Trigger: CTTTTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp TTCGCTGCAAATCTGCGGGGCTTCAGTGGTGGAGATTTATCGTCATaGCAGATGCGTGTGTGTGAGATACATAATTCCTCTCACACGGCC +
Preference number: 1 (lower is better)
Translates to: FAANLRGFSGGDLSS*QMRVCEIHNSSHTA
Trigger: GGCCGTGTGAGAGGAATTATGTATCTCACACACACGCATCTGGCATGACGATAAATCTCCACCACTGAAGCCCCGCAGATTTGCAGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp ATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATaGGTTTACACCTCTGCTGAAGCGGCTTTTTCTCCGGTGCTCAGA +
Preference number: 1 (lower is better)
Translates to: MPKPSALYMSCWEIK*VYTSAEAAFSPVLR
Trigger: TCTGAGCACCGGAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 90 bp GAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTaGATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATT +
Preference number: 1 (lower is better)
Translates to: EGEEPWITILPGQYI*MPKPSALYMSCWEI
Trigger: AATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTaGCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATA +
Preference number: 1 (lower is better)
Translates to: IQQETLKGRNLGLPS*PVNISECQSPPLCI
Trigger: TATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 90 bp GGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATaGCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAAT +
Preference number: 1 (lower is better)
Translates to: GRNLGLPSCPVNISE*QSPPLCICPVGRLN
Trigger: ATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCGGCTGGGCCCGCATATaGGCTCCCCGCAGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: GPSSSARQWKVFSVDAPAGWARI*APRRGA
Trigger: AGCCCCTCTGCGGGGAGCTCATATGCGGGCCCAGCC...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR-3UTR TCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTCACTGCAGGTGTGGTaGGCACAGAGCACGCAGAGG +
Preference number: 2 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGSLQVW*AQSTQR
Trigger: CCTCTGCGTGCTCTGTGCTCACCACACCTGCAGTGA...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR-3UTR GCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCCCAGGCAGTGGGCACTaGTCGTTGGAAACCCCGGAT +
Preference number: 2 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGPGSGH*SLETPD
Trigger: ATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGG...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR-3UTR CCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATACCTGGCTTCACTCCCTaGTCAGCCGGGAGCACGGGA +
Preference number: 2 (lower is better)
Translates to: LLQSQGAPDRVQRGWARIPGFTP*SAGSTG
Trigger: TCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGG...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR CAA 90 bp GGGAAAGTCACGCTGGTTCCAGCTGTGACTGCAGCCGCCACCGCATaGCGCCGCACGTCAGCACCAACCACGTGGCAGCGAGCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: GKVTLVPAVTAAATA*RRTSAPTTWQRAWE
Trigger: CTCCCAGGCTCGCTGCCACGTGGTTGGTGCTGACGTGCGGCGCAATGCGGTGGCGGCTGCAGTCACAGCTGGAACCAGCGTGACTTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTGGGCACCAGGCAGTaGGCACTGCTCGTTGGAAAC +
Preference number: 2 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGLGTRQ*ALLVGN
Trigger: GTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAA...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR-3UTR GCA 90 bp GCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGGGCCACGCCTCTCTaGAGCCTTTTGTCTGGTTTC +
Preference number: 2 (lower is better)
Translates to: AGRHRICPSDRRRLLQSQGATPL*SLLSGF
Trigger: GAAACCAGACAAAAGGCTGCAGAGAGGCGTGGCCCC...CTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR-3UTR CCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACGTGAGCCCTCGGGCCTaGGTGGGTCCTCTACCTGGC +
Preference number: 2 (lower is better)
Translates to: ACVERAAKESRRTLLVSHVSPRA*VGPLPG
Trigger: GCCAGGTAGAGGACCCACCCAGGCCCGAGGGCTCAC...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAAGTGCCCTGGCCAGCTaGCAGGTTCAGGCCACTGGC +
Preference number: 2 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERSALAS*QVQATG
Trigger: GCCAGTGGCCTGAACCTGTCAGCTGGCCAGGGCACT...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGGCCCTCCAGGGGCACTaGCTGACCCCTCACACGACG +
Preference number: 2 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQALQGH*LTPHTT
Trigger: CGTCGTGTGAGGGGTCAGGCAGTGCCCCTGGAGGGC...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCAGAGGCTGCCGGGGCTaGCAACCAGGGACATGGAGG +
Preference number: 2 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSRGCRG*QPGTWR
Trigger: CCTCCATGTCCCTGGTTGGCAGCCCCGGCAGCCTCT...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTACACTCCCTAGGGGCTaGACCTGGGGGCCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPTLPRG*TWGPVW
Trigger: CCACACAGGCCCCCAGGTGCAGCCCCTAGGGAGTGT...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTCCTGGCATAGGCGCTaGTCCGCCCCGTCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPSWHRR*SAPSSF
Trigger: GAACGAGGACGGGGCGGAGCAGCGCCTATGCCAGGA...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCGGAGAAGAGGGCACCTaGCTTCACTCCCTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: GPSSSARQWKVFSVDAPAGEEGT*LHSLVS
Trigger: GCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCC...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR-3UTR CCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAGGTCTTGGCCCCTGGTaGGGGTCTTGGCCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERGLGPW*GSWPSR
Trigger: CCTGCTTGGCCAAGACCCCCACCAGGGGCCAAGACC...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CAA 90 bp AAAAGCCCCCGGCCGTGCGGGCTGCGCAGAAATGACCTTGGGCCCTaGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACA +
Preference number: 2 (lower is better)
Translates to: KSPRPCGLRRNDLGP*SRGFLWSVQLRCET
Trigger: TGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCACGGCCGGGGGCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAAGTCGAATCCGAGCTaGTGGGACTGTAAGGAAGCG +
Preference number: 2 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSKSNPS*WDCKEA
Trigger: CGCTTCCTTACAGTCCCATCAGCTCGGATTCGACTT...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR-3UTR TCA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCGTTGGAAACCCCGGATaGAAACACTCAGTAGCAGAA +
Preference number: 2 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSVGNPG*KHSVAE
Trigger: TTCTGCTACTGAGTGTTTTCATCCGGGGTTTCCAAC...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR-3UTR GCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGGTTCAGGCCACTGGCTaGCTCCGGCCTCATCCCCTG +
Preference number: 2 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQVQATG*LRPHPL
Trigger: CAGGGGATGAGGCCGGAGGCAGCCAGTGGCCTGAAC...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTCTGACAGACCTTCCCTaGCCACAGAGGCCACTCTGG +
Preference number: 2 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPLTDLP*PQRPLW
Trigger: CCAGAGTGGCCTCTGTGGCCAGGGAAGGTCTGTCAG...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CAA 90 bp ACATCCATGCCCAGTCCACCCAGCTGCACGTCATGTGCCGGCAGTTaGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: TSMPSPPSCTSCAGS*GVGGASKVKAGRCP
Trigger: GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGACGTGCAGCTGGGTGGACTGGGCATGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCAGGGCTCTCCCCGACTaGCCAAGACCTCCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVRALPD*PRPPQR
Trigger: CCTTTGAGGAGGTCTTGGGCAGTCGGGGAGAGCCCT...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCACCAGGAGCGGCTTTCTaGCCAGTGAGCCCTCGGGCC +
Preference number: 2 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSPGAAF*PVSPRA
Trigger: GGCCCGAGGGCTCACTGGGCAGAAAGCCGCTCCTGG...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGCAGCTGCACGTCATGTaGCGGCAGTTTGGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQQLHVM*RQFGCG
Trigger: CCCACACCCAAACTGCCGGCACATGACGTGCAGCTG...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCCTGCAGCCTTTTGTCTaGTTTCACGTCCACGTGTCC +
Preference number: 2 (lower is better)
Translates to: GPSSSARQWKVFSVDAPALQPFV*FHVHVS
Trigger: GGACACGTGGACGTGAAACCAGACAAAAGGCTGCAG...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR-3UTR CCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGACAGGTTCAGGCCACTaGCTGCCTCCGGCCTCATCC +
Preference number: 2 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQTGSGH*LPPASS
Trigger: GGATGAGGCCGGAGGCAGCCAGTGGCCTGAACCTGT...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTCCCTGGTGGGGGTCTTaGCCAAGCAGGCTCGGCTGC +
Preference number: 2 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCPWWGS*PSRLGC
Trigger: GCAGCCGAGCCTGCTTGGCCAAGACCCCCACCAGGG...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTTCCACACCTGGGAGATaGGTACAGCGGCCTGAGTCT +
Preference number: 2 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPSTPGR*VQRPES
Trigger: AGACTCAGGCCGCTGTACCCATCTCCCAGGTGTGGA...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CAA 90 bp TGCCTCTGGGCTGCAACGCCTTTTCTTGGACGCCTCTTCGTGGCTTaGATGCGAAGAAGCAGGTGTGCAGTCCGGGCCTGGCTTCAGGTG +
Preference number: 2 (lower is better)
Translates to: CLWAATPFLGRLFVA*MRRSRCAVRAWLQV
Trigger: CACCTGAAGCCAGGCCCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAAAGGCGTTGCAGCCCAGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCGCCTCTTCGTGGCTTTaGTGCGAAGAAGCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPASSWL*CEEAGV
Trigger: CACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGC...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCCGAGGGCCCATCACTaGAGGTGTGGTGAGCACAGA +
Preference number: 2 (lower is better)
Translates to: PWAPGSGHCSLETPDENTPRAHH*RCGEHR
Trigger: TCTGTGCTCACCACACCTGCAGTGATGGGCCCTCGG...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR-3UTR CCA 90 bp AGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACACGTGTCCCTCCTCTaGAAAACCTTGGAGAAGAGG +
Preference number: 2 (lower is better)
Translates to: SSSARQWKVFSVDAPATRHVSLL*KTLEKR
Trigger: CCTCTTCTCCAAGGTTTTCCAGAGGAGGGACACGTG...TCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR-3UTR CCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCGCGGCCAAGGGCACTTaGCCTGGGAGAGAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVAAKGT*PGREAA
Trigger: GGCAGCCTCTCTCCCAGGCCAAGTGCCCTTGGCCGC...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCAGAAATCAGCTGCCCTaGCCTTCCAGGCACAGCAAG +
Preference number: 2 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSRNQLP*PSRHSK
Trigger: CTTGCTGTGCCTGGAAGGCCAGGGCAGCTGATTTCT...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCACCCTCACACGACGAGTaGCCTGGCCAGCTGACAGGT +
Preference number: 2 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSPSHDE*PGQLTG
Trigger: ACCTGTCAGCTGGCCAGGGCACTCGTCGTGTGAGGG...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAGCATGCCCAGAGCTCTaGGCTCCTTCCCAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSACPEL*APSQGS
Trigger: AGAGCCCTGGGAAGGAGCGCAGAGCTCTGGGCATGC...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGCCAAGCAGGCTCGGCTaGCCAGGGACCCTGCCGCAG +
Preference number: 2 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLPSRLG*PGTLPQ
Trigger: CTGCGGCAGGGTCCCTGGGCAGCCGAGCCTGCTTGG...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCGCGAAGAAGCAGGTGTaGAGTCCGGGCCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRAKKQV*SPGLAS
Trigger: TGAAGCCAGGCCCGGACTGCACACCTGCTTCTTCGC...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGCTGCATCTACCCAACTaGTCGTCAACGCTTCCACCC +
Preference number: 2 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQLHLPN*SSTLPP
Trigger: GGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAG...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGCTGCCTGTGGGGGTGTaGCTGCCTTCCTGTTCTTAC +
Preference number: 2 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQLPVGV*LPSCSY
Trigger: GTAAGAACAGGAAGGCAGCCACACCCCCACAGGCAG...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGACCCTGCCGCAGGTaGGGCAGTGTCCAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLGPCRR*GSVQEL
Trigger: GAGCTCCTGGACACTGCCTCACCTGCGGCAGGGTCC...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGTACCCAGCATTTCTTTaGGGTCTTGGCCCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQYPAFL*GLGPWW
Trigger: CCACCAGGGGCCAAGACCCCAAAGAAATGCTGGGTA...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGGCGACGCGAGGCACCTaGTGGGCTCCCAGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: PVNISECQSPPLCICPVGATRGT*WAPRES
Trigger: ACTTTCCCTGGGAGCCCAGCAGGTGCCTCGCGTCGC...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp CTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCCATGAAATAAGCACGTaGGTCTCATCCACCGAGGGC +
Preference number: 2 (lower is better)
Translates to: LGHQAVGTARWKPRMKTLHEIST*VSSTEG
Trigger: GCCCTCGGTGGATGAGACCCACGTGCTTATTTCATG...GAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR-3UTR CCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAACCAAGTCCACTGCCTaGTCTCTCTCCACACCTGGG +
Preference number: 2 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSTKSTA*SLSTPG
Trigger: CCCAGGTGTGGAGAGAGACCAGGCAGTGGACTTGGT...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GTGACCTGGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGTCTCTCTTCCTCTCTTaGCCTTCGCTGATCCCCATG +
Preference number: 2 (lower is better)
Translates to: VTWHLRALPRQLCDASHQSLFLS*PSLIPM
Trigger: CATGGGGATCAGCGAAGGCCAAGAGAGGAAGAGAGA...CTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCTCCAGGGGCACTGCCTaGCCCCTCACACGACGAGTG +
Preference number: 2 (lower is better)
Translates to: GGTLDYHLARSIYLNAKASRGTA*PLTRRV
Trigger: CACTCGTCGTGTGAGGGGTCAGGCAGTGCCCCTGGA...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGATGGGTACAGCGGCCTaGGTCTGTCTCCAGGAGCGG +
Preference number: 2 (lower is better)
Translates to: PVNISECQSPPLCICPVGMGTAA*VCLQER
Trigger: CCGCTCCTGGAGACAGACTCAGGCCGCTGTACCCAT...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCGCAGGACCCTCCTGGTaGGCCACGTGGAGACCAAGT +
Preference number: 2 (lower is better)
Translates to: GDLEGEEPWITILPGQYIAGPSW*ATWRPS
Trigger: ACTTGGTCTCCACGTGGCTCACCAGGAGGGTCCTGC...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCTCCGGCCTCATCCCCTaGTGCAGAACTGCATCTACC +
Preference number: 2 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVSGLIP*CRTAST
Trigger: GGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCGGA...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCTGCAACGCCTTTTCTTaGACGCCTCTTCGTGGCTTT +
Preference number: 2 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPCNAFS*TPLRGF
Trigger: AAAGCCACGAAGAGGCGTCCAAGAAAAGGCGTTGCA...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCCGGGCTGCGCAGAAATaGCCTTGGGCCCTTGAGCCG +
Preference number: 2 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLRAAQK*PWALEP
Trigger: CGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCG...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp CCTCTAAAACCTTTAATAACGAGGCGTGGATGCTCTCCACGTGGAAAAGGATTTGGGCGCCACAGAATCTaGCCCTCCGACCGACGGCGT +
Preference number: 2 (lower is better)
Translates to: PLKPLITRRGCSPRGKGFGRHRI*PSDRRR
Trigger: ACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCC...AAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR-3UTR GCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCCCCCGGCTCTCTGCATaGCCAGAGCTCTGCGCTCCT +
Preference number: 2 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLPRLSA*PELCAP
Trigger: AGGAGCGCAGAGCTCTGGGCATGCAGAGAGCCGGGG...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCAGACCCACTAAGAGCTaGCCCGCTACCCACCCCGGC +
Preference number: 2 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSRPTKS*PATHPG
Trigger: GCCGGGGTGGGTAGCGGGGCAGCTCTTAGTGGGTCT...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCACACGACGAGTGCCCTaGCCAGCTGACAGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: GDLEGEEPWITILPGQYITRRVP*PADRFR
Trigger: CCTGAACCTGTCAGCTGGCCAGGGCACTCGTCGTGT...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGTCTCTCTCCACACCTaGGAGATGGGTACAGCGGCC +
Preference number: 2 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLVSLHT*EMGTAA
Trigger: GGCCGCTGTACCCATCTCCCAGGTGTGGAGAGAGAC...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCAGGGCCGCTGTCCTTaGAAGCCCTGGCCCGGGTTT +
Preference number: 2 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFQGRCP*KPWPGF
Trigger: AAACCCGGGCCAGGGCTTCCAAGGACAGCGGCCCTG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCGCCACGCCAGCTTTGTaGTGCCTCCCACCAGACTGC +
Preference number: 2 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLATPAL*CLPPDC
Trigger: GCAGTCTGGTGGGAGGCATCACAAAGCTGGCGTGGC...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCACTCACAATGACATTGTaGACGCCTGTGCACCTCTGT +
Preference number: 2 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSLTMTL*TPVHLC
Trigger: ACAGAGGTGCACAGGCGTCCACAATGTCATTGTGAG...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAACCGGCAGTTTGGGTGTaGGAGGAGCCTCCAAAGTCA +
Preference number: 2 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQPAVWV*EEPPKS
Trigger: TGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGG...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTTGCTCTTGGCGACTCTaGCTGTTCTTGCCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: NWEHGAGTHSPLDPNICICSWRL*LFLPLG
Trigger: GCCCAGAGGCAAGAACAGTCAGAGTCGCCAAGAGCA...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTGCAGGCAGATGCCCCTaGCTTCTAAGCAGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFAGRCP*LLSRAQ
Trigger: CTGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGC...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGCCCCTGCTGCAGAACTaGATCTACCCAACTGGTCGT +
Preference number: 2 (lower is better)
Translates to: PVNISECQSPPLCICPVGPLLQN*IYPTGR
Trigger: ACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGG...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGGGCCTCATCCCCTGCTaGAGAACTGCATCTACCCAA +
Preference number: 2 (lower is better)
Translates to: PVNISECQSPPLCICPVGGLIPC*RTASTQ
Trigger: TTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCC...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCACCCAGACTTTCCACTaGCGGCCAAGGGCACTTGGC +
Preference number: 2 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSTQTFH*RPRALG
Trigger: GCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGT...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCCATGTGCCGGCAGTTTaGGTGTGGGAGGAGCCTCCA +
Preference number: 2 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLHVPAV*VWEEPP
Trigger: TGGAGGCTCCTCCCACACCCAAACTGCCGGCACATG...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAAACGTCCTCACCAGCATaGTCAAGGGACCCAGACTTT +
Preference number: 2 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQTSSPA*SRDPDF
Trigger: AAAGTCTGGGTCCCTTGAGCATGCTGGTGAGGACGT...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTGGTGTGAGACATCCATaGCCAGTCCACCCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFGVRHP*PVHPAA
Trigger: TGCAGCTGGGTGGACTGGGCATGGATGTCTCACACC...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCCCAGGAGAAATCAGCTaGCCTGGCCTTCCAGGCACA +
Preference number: 2 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSPGEIS*PGLPGT
Trigger: TGTGCCTGGAAGGCCAGGGCAGCTGATTTCTCCTGG...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCGATTCGCTGCAAATCTaGGGGGCTTCAGTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: GGTLDYHLARSIYLNAKADSLQI*GASVVE
Trigger: CTCCACCACTGAAGCCCCGCAGATTTGCAGCGAATC...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCTCCAGAAGAGACCTTaGGCCACTGATCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFLQKRP*ATDPQR
Trigger: CCTCTGGGGATCAGTGGCCCAAGGTCTCTTCTGGAG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR TCA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGAGCTGCCAACAGCCCTaGCAGACCTTCCCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMSCQQP*QTFPGH
Trigger: GTGGCCAGGGAAGGTCTGTCAGGGCTGTTGGCAGCT...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGCATTGTGGACGCCTGTaGACCTCTGTAGTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: PVNISECQSPPLCICPVGHCGRL*TSVVPE
Trigger: TTCTGGAACTACAGAGGTGCACAGGCGTCCACAATG...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTGGGCTGGGCAGGAGCTaGTGCAAAATCAGATGCATG +
Preference number: 2 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFGLGRS*CKIRCM
Trigger: CATGCATCTGATTTTGCACCAGCTCCTGCCCAGCCC...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCGGCATCTTAGGGCTTTaGCACGCCAGCTTTGTGATG +
Preference number: 2 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLGILGL*HASFVM
Trigger: CATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCC...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCGAACACATTCCCCACTaGATCCAAACATCTGCATTC +
Preference number: 2 (lower is better)
Translates to: GDLEGEEPWITILPGQYIEHIPH*IQTSAF
Trigger: GAATGCAGATGTTTGGATCCAGTGGGGAATGTGTTC...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTGGAGATTTATCGTCATaGCAGATGCGTGTGTGTGAG +
Preference number: 2 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFGDLSS*QMRVCE
Trigger: CTCACACACACGCATCTGGCATGACGATAAATCTCC...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR GCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGTTGGGAGATTAAATaGGTTTACACCTCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: GDLEGEEPWITILPGQYICWEIK*VYTSAE
Trigger: TTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACA...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCTGCATGCATAAAGTCTaGAGTATGCTCCTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLCMHKV*SMLLSE
Trigger: TTCAGAGAGGAGCATACTCCAGACTTTATGCATGCA...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp GGCCCCTGGTGGGGGTCTTGGCCAAGCAGGCTCGGCTaGCCAGGGACCCTGCCGCAGGTGAGGCAGTGTCCA +
Preference number: 3 (lower is better)
Translates to: GPWWGSWPSRLG*PGTLPQVRQCP
Trigger: TGGACACTGCCTCACCTGCGGCAGGGTCCCTGGGCAGCCGAGCCTGCTTGGCCAAGACCCCCACCAGGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGCTGCTGGGTCCCTaGGGCACCAGGCAGTGGGCA +
Preference number: 3 (lower is better)
Translates to: PSQEGPTAQPTPARGPQAQLLGP*GTRQWA
Trigger: TGCCCACTGCCTGGTGCCCAAGGGACCCAGCAGCTG...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR GCA 72 bp CCTCCAGGGGCACTGCCTGACCCCTCACACGACGAGTaGCCTGGCCAGCTGACAGGTTCAGGCCACTGGCTG +
Preference number: 3 (lower is better)
Translates to: PPGALPDPSHDE*PGQLTGSGHWL
Trigger: CAGCCAGTGGCCTGAACCTGTCAGCTGGCCAGGGCACTCGTCGTGTGAGGGGTCAGGCAGTGCCCCTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp AGGGCACCCTACCACCTGCCAGCGACGCGAGGCACCTaGTGGGCTCCCAGGGAAAGTCACGCTGGTTCCAGC +
Preference number: 3 (lower is better)
Translates to: RAPYHLPATRGT*WAPRESHAGSS
Trigger: GCTGGAACCAGCGTGACTTTCCCTGGGAGCCCAGCAGGTGCCTCGCGTCGCTGGCAGGTGGTAGGGTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTCCCCTGGTGGGGGTCTaGGCCAAGCAGGCTCGGCTG +
Preference number: 3 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSPLVGV*AKQARL
Trigger: CAGCCGAGCCTGCTTGGCCAAGACCCCCACCAGGGG...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACGGCGGCCAAGGGCACTaGGCCTGGGAGAGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: ACVERAAKESRRTLLVSHGGQGH*AWERGC
Trigger: GCAGCCTCTCTCCCAGGCCAAGTGCCCTTGGCCGCC...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 72 bp TGCCTGACCCCTCACACGACGAGTGCCCTGGCCAGCTaGCAGGTTCAGGCCACTGGCTGCCTCCGGCCTCAT +
Preference number: 3 (lower is better)
Translates to: CLTPHTTSALAS*QVQATGCLRPH
Trigger: ATGAGGCCGGAGGCAGCCAGTGGCCTGAACCTGTCAGCTGGCCAGGGCACTCGTCGTGTGAGGGGTCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 72 bp GAGGAAAAGCCCCCGGCCGTGCGGGCTGCGCAGAAATaGCCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTC +
Preference number: 3 (lower is better)
Translates to: EEKPPAVRAAQK*PWALEPWLPLV
Trigger: GACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCACGGCCGGGGGCTTTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 72 bp CTGGGCTCCCAGGGAAAGTCACGCTGGTTCCAGCTGTaGCTGCAGCCGCCACCGCATTGCGCCGCACGTCAG +
Preference number: 3 (lower is better)
Translates to: LGSQGKSRWFQL*LQPPPHCAARQ
Trigger: CTGACGTGCGGCGCAATGCGGTGGCGGCTGCAGTCACAGCTGGAACCAGCGTGACTTTCCCTGGGAGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp GCTCCCAGGGAAAGTCACGCTGGTTCCAGCTGTGACTaGAGCCGCCACCGCATTGCGCCGCACGTCAGCACC +
Preference number: 3 (lower is better)
Translates to: APRESHAGSSCD*SRHRIAPHVST
Trigger: GGTGCTGACGTGCGGCGCAATGCGGTGGCGGCTGCAGTCACAGCTGGAACCAGCGTGACTTTCCCTGGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp GACGAGTGCCCTGGCCAGCTGACAGGTTCAGGCCACTaGCTGCCTCCGGCCTCATCCCCTGCTGCAGAACTG +
Preference number: 3 (lower is better)
Translates to: DECPGQLTGSGH*LPPASSPAAEL
Trigger: CAGTTCTGCAGCAGGGGATGAGGCCGGAGGCAGCCAGTGGCCTGAACCTGTCAGCTGGCCAGGGCACTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp CGTCTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCCCTCTCTGCAGCCTTTaGTCTGGTTTCACGTCCACG +
Preference number: 3 (lower is better)
Translates to: RLLQSQGAPDRVQRGWARPLCSL*SGFTST
Trigger: CGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGG...GCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR TCA 72 bp GGCCGTGCGGGCTGCGCAGAAATGACCTTGGGCCCTTaGGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGT +
Preference number: 3 (lower is better)
Translates to: GRAGCAEMTLGP*AVASSGLCSSG
Trigger: ACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCACGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp AAAACCTTGGAGAAGAGGGCACCTGGCTTCACTCCCTaGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCC +
Preference number: 3 (lower is better)
Translates to: KTLEKRAPGFTP*SAGSTGRGTQA
Trigger: GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAAGGTTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR CCA 72 bp CTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTaGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGA +
Preference number: 3 (lower is better)
Translates to: LYPVGPSSSARQ*KVFSVDAPATR
Trigger: TCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR CCA 72 bp CGCCGCACGTCAGCACCAACCACGTGGCAGCGAGCCTaGGAGCCATCAGATTCGCTGCAAATCTGCGGGGCT +
Preference number: 3 (lower is better)
Translates to: RRTSAPTTWQRA*EPSDSLQICGA
Trigger: AGCCCCGCAGATTTGCAGCGAATCTGATGGCTCCCAGGCTCGCTGCCACGTGGTTGGTGCTGACGTGCGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp GCCACCGCATTGCGCCGCACGTCAGCACCAACCACGTaGCAGCGAGCCTGGGAGCCATCAGATTCGCTGCAA +
Preference number: 3 (lower is better)
Translates to: ATALRRTSAPTT*QRAWEPSDSLQ
Trigger: TTGCAGCGAATCTGATGGCTCCCAGGCTCGCTGCCACGTGGTTGGTGCTGACGTGCGGCGCAATGCGGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 72 bp GTCTCATCCACCGAGGGCCCATCACTGCAGGTGTGGTaGGCACAGAGCACGCAGAGGGTCCCGAAAGCCTCT +
Preference number: 3 (lower is better)
Translates to: VSSTEGPSLQVW*AQSTQRVPKAS
Trigger: AGAGGCTTTCGGGACCCTCTGCGTGCTCTGTGCTCACCACACCTGCAGTGATGGGCCCTCGGTGGATGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR CCA 72 bp GCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTaGTCGTCAACGCTTCCACCCGGACCAGCCACCCCT +
Preference number: 3 (lower is better)
Translates to: ASSPAAELHLPN*SSTLPPGPATP
Trigger: AGGGGTGGCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp CTCCTGGTGAGCCACGTGGAGACCAAGTCCACTGCCTaGTCTCTCTCCACACCTGGGAGATGGGTACAGCGG +
Preference number: 3 (lower is better)
Translates to: LLVSHVETKSTA*SLSTPGRWVQR
Trigger: CCGCTGTACCCATCTCCCAGGTGTGGAGAGAGACCAGGCAGTGGACTTGGTCTCCACGTGGCTCACCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 72 bp AGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTaGGCCACGTGGAGACCAAGTCCACTGCCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: RELLRSHAGPSW*ATWRPSPLPGL
Trigger: GAGACCAGGCAGTGGACTTGGTCTCCACGTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 72 bp GCTCCGCCCCGTCCTCGTTCCTGCTCTTGGCGACTCTaGCTGTTCTTGCCTCTGGGCTGCAACGCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: APPRPRSCSWRL*LFLPLGCNAFS
Trigger: AGAAAAGGCGTTGCAGCCCAGAGGCAAGAACAGTCAGAGTCGCCAAGAGCAGGAACGAGGACGGGGCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp GACATCCATGCCCAGTCCACCCAGCTGCACGTCATGTaGCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGT +
Preference number: 3 (lower is better)
Translates to: DIHAQSTQLHVM*RQFGCGRSLQS
Trigger: ACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGACGTGCAGCTGGGTGGACTGGGCATGGATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp CTCAGGTGTGAGACATCCATGCCCAGTCCACCCAGCTaGACGTCATGTGCCGGCAGTTTGGGTGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LRCETSMPSPPS*TSCAGSLGVGG
Trigger: TCCTCCCACACCCAAACTGCCGGCACATGACGTGCAGCTGGGTGGACTGGGCATGGATGTCTCACACCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp TCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATaGCCAGTCCACCCAGCTGCACGTCATGTGCCGGCA +
Preference number: 3 (lower is better)
Translates to: SSGLCSSGVRHP*PVHPAARHVPA
Trigger: TGCCGGCACATGACGTGCAGCTGGGTGGACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp AGCGGCACGGGGCATGGCTGTCATGAAATAAGCACGTaGGTCTCATCCACCGAGGGCCCATCACTGCAGGTG +
Preference number: 3 (lower is better)
Translates to: SGTGHGCHEIST*VSSTEGPSLQV
Trigger: CACCTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR CCA 72 bp CACCCAGCTGCACGTCATGTGCCGGCAGTTTGGGTGTaGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCC +
Preference number: 3 (lower is better)
Translates to: HPAARHVPAVWV*EEPPKSKQADA
Trigger: GGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGACGTGCAGCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp CCAGTCCACCCAGCTGCACGTCATGTGCCGGCAGTTTaGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCA +
Preference number: 3 (lower is better)
Translates to: PVHPAARHVPAV*VWEEPPKSKQA
Trigger: TGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGACGTGCAGCTGGGTGGACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTTACCCAGCATTTCTTaGGGGTCTTGGCCCCTGGTG +
Preference number: 3 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSLPSIS*GSWPLV
Trigger: CACCAGGGGCCAAGACCCCAAAGAAATGCTGGGTAA...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 72 bp ACAATGATGAAGCGGCAAACGGGGGTCCCCCACTTCTaGGTCCACACTCAGTTCCCATGGCTGCACCAGCCC +
Preference number: 3 (lower is better)
Translates to: TMMKRQTGVPHF*VHTQFPWLHQP
Trigger: GGGCTGGTGCAGCCATGGGAACTGAGTGTGGACTCAGAAGTGGGGGACCCCCGTTTGCCGCTTCATCATTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR TCA 72 bp CTGCAACGCCTTTTCTTGGACGCCTCTTCGTGGCTTTaGTGCGAAGAAGCAGGTGTGCAGTCCGGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: LQRLFLDASSWL*CEEAGVQSGPG
Trigger: GCCAGGCCCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAAAGGCGTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp GGAGGCCTGAGGCCCTGGACAGGAGAAGCCACATCCTaGAAGGATCAGTGCTGGGACACAGATGTCCCTAAG +
Preference number: 3 (lower is better)
Translates to: GGLRPWTGEATS*KDQCWDTDVPK
Trigger: CTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGGCTTCTCCTGTCCAGGGCCTCAGGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCAATGACCTTGGGCCCTaGAGCCGTGGCTTCCTCTGG +
Preference number: 3 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRNDLGP*SRGFLW
Trigger: CCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATT...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 72 bp AATCAGCTGCCCTGGCCTTCCAGGCACAGCAAGTCCTaGGCATGCTCCAGAAGAGACCTTGGGCCACTGATC +
Preference number: 3 (lower is better)
Translates to: NQLPWPSRHSKS*ACSRRDLGPLI
Trigger: GATCAGTGGCCCAAGGTCTCTTCTGGAGCATGCTCAGGACTTGCTGTGCCTGGAAGGCCAGGGCAGCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp GTCCTCGTTCCTGCTCTTGGCGACTCTGACTGTTCTTaGCTCTGGGCTGCAACGCCTTTTCTTGGACGCCTC +
Preference number: 3 (lower is better)
Translates to: VLVPALGDSDCS*LWAATPFLGRL
Trigger: GAGGCGTCCAAGAAAAGGCGTTGCAGCCCAGAGGCAAGAACAGTCAGAGTCGCCAAGAGCAGGAACGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp GCCTCCCACCAGACTGCATGCATAAAGTCTGGAGTATaGTCCTCTCTGAAGTGGAGGAGGCCTGAGGCCCTG +
Preference number: 3 (lower is better)
Translates to: ASHQTACIKSGV*SSLKWRRPEAL
Trigger: CAGGGCCTCAGGCCTCCTCCACTTCAGAGAGGAGCATACTCCAGACTTTATGCATGCAGTCTGGTGGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp CCACGTGGCAGCGAGCCTGGGAGCCATCAGATTCGCTaGAAATCTGCGGGGCTTCAGTGGTGGAGATTTATC +
Preference number: 3 (lower is better)
Translates to: PRGSEPGSHQIR*KSAGLQWWRFI
Trigger: GATAAATCTCCACCACTGAAGCCCCGCAGATTTGCAGCGAATCTGATGGCTCCCAGGCTCGCTGCCACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp GGGTCCCTTGGGCACCAGGCAGTGGGCACTGCTCGTTaGAAACCCCGGATGAAAACACTCAGTAGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: GSLGHQAVGTAR*KPRMKTLSSRR
Trigger: TCTTCTGCTACTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
3UTR CCA 72 bp AGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTaGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCC +
Preference number: 3 (lower is better)
Translates to: RNDLGPLSRGFL*SVQLRCETSMP
Trigger: GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp GTAGAGGGCCTTGGCAGCTCCGTGTGTCCTGTGACCTaGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGAT +
Preference number: 3 (lower is better)
Translates to: VEGLGSSVCPVT*HLRALPRQLCD
Trigger: ATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCACAGGACACACGGAGCTGCCAAGGCCCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCCAGCTCACAATGACATaGTGGACGCCTGTGCACCTC +
Preference number: 3 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRQLTMT*WTPVHL
Trigger: GAGGTGCACAGGCGTCCACAATGTCATTGTGAGCTG...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCCTGCAACGCCTTTTCTaGGACGCCTCTTCGTGGCTT +
Preference number: 3 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRLQRLF*DASSWL
Trigger: AAGCCACGAAGAGGCGTCCAAGAAAAGGCGTTGCAG...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp CAGCGAGCCTGGGAGCCATCAGATTCGCTGCAAATCTaGGGGGCTTCAGTGGTGGAGATTTATCGTCATGCC +
Preference number: 3 (lower is better)
Translates to: QRAWEPSDSLQI*GASVVEIYRHA
Trigger: GGCATGACGATAAATCTCCACCACTGAAGCCCCGCAGATTTGCAGCGAATCTGATGGCTCCCAGGCTCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp GTTCCTGCTCTTGGCGACTCTGACTGTTCTTGCCTCTaGGCTGCAACGCCTTTTCTTGGACGCCTCTTCGTG +
Preference number: 3 (lower is better)
Translates to: VPALGDSDCSCL*AATPFLGRLFV
Trigger: CACGAAGAGGCGTCCAAGAAAAGGCGTTGCAGCCCAGAGGCAAGAACAGTCAGAGTCGCCAAGAGCAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCTTCTCTCTTCCTCTCTaGGCCTTCGCTGATCCCCAT +
Preference number: 3 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRFSLPL*AFADPH
Trigger: ATGGGGATCAGCGAAGGCCAAGAGAGGAAGAGAGAA...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGTCATGTGCCGGCAGTTaGGGTGTGGGAGGAGCCTCC +
Preference number: 3 (lower is better)
Translates to: PVNISECQSPPLCICPVGSCAGS*GVGGAS
Trigger: GGAGGCTCCTCCCACACCCAAACTGCCGGCACATGA...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp AGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCTaGTCATCAACTCCGCATTCAAGAAGAGACCCTCAG +
Preference number: 3 (lower is better)
Translates to: SAGTQMSLRPTR*SSTPHSRRDPQ
Trigger: CTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp CCACGCCAGCTTTGTGATGCCTCCCACCAGACTGCATaGATAAAGTCTGGAGTATGCTCCTCTCTGAAGTGG +
Preference number: 3 (lower is better)
Translates to: PRQLCDASHQTA*IKSGVCSSLKW
Trigger: CCACTTCAGAGAGGAGCATACTCCAGACTTTATGCATGCAGTCTGGTGGGAGGCATCACAAAGCTGGCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp CATTCCCCACTGGATCCAAACATCTGCATTCTCAGGTaGGCTGGGCAGGAGCTGGTGCAAAATCAGATGCAT +
Preference number: 3 (lower is better)
Translates to: HSPLDPNICILR*AGQELVQNQMH
Trigger: ATGCATCTGATTTTGCACCAGCTCCTGCCCAGCCCACCTGAGAATGCAGATGTTTGGATCCAGTGGGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp AGCCATCAGATTCGCTGCAAATCTGCGGGGCTTCAGTaGTGGAGATTTATCGTCATGCCAGATGCGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SHQIRCKSAGLQ*WRFIVMPDACV
Trigger: CACACACGCATCTGGCATGACGATAAATCTCCACCACTGAAGCCCCGCAGATTTGCAGCGAATCTGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR-3UTR CAA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCGCCTCTTCGTGGCTTaGATGCGAAGAAGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIRLFVA*MRRSRC
Trigger: ACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCG...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp GGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTaGATGTGTATGCCACACACAGCTCACAATGACATT +
Preference number: 3 (lower is better)
Translates to: GKSRPLGSYSHV*MCMPHTAHNDI
Trigger: AATGTCATTGTGAGCTGTGTGTGGCATACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp CCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATaGGTTTACACCTCTGCTGAAGCGGCTTTTTCTCCG +
Preference number: 3 (lower is better)
Translates to: PSALYMSCWEIK*VYTSAEAAFSP
Trigger: CGGAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CCA 72 bp GCATGTGTATGCCACACACAGCTCACAATGACATTGTaGACGCCTGTGCACCTCTGTAGTTCCAGAAAACAC +
Preference number: 3 (lower is better)
Translates to: ACVCHTQLTMTL*TPVHLCSSRKH
Trigger: GTGTTTTCTGGAACTACAGAGGTGCACAGGCGTCCACAATGTCATTGTGAGCTGTGTGTGGCATACACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR GCA 72 bp CTTGGATTACCATCTTGCCCGGTCAATATATCTGAATaGCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGG +
Preference number: 3 (lower is better)
Translates to: LGLPSCPVNISE*QSPPLCICPVG
Trigger: CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR TCA 72 bp GAACCTTGGATTACCATCTTGCCCGGTCAATATATCTaGATGCCAAAGCCCTCCGCTCTGTATATGTCCTGT +
Preference number: 3 (lower is better)
Translates to: EPWITILPGQYI*MPKPSALYMSC
Trigger: ACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCGGCAGGTGGGCGGCGTaGCCACGACCAGGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSGRWAA*PRPGSA
Trigger: TGCCGACCCTGGTCGTGGGCACGCCGCCCACCTGCC...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CGTCTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCGACGCACAGCTCCCCTaGTGCCACGCCTGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RLLQSQGAPDRVQRGWARDAQLP*CHAWAR
Trigger: CCGGGCCCAGGCGTGGCAGCAGGGGAGCTGTGCGTC...GCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCGACGCACAGCTCCCCTaGTGCCACGCCTGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PSQEGPTAQPTPARGPQADAQLP*CHAWAR
Trigger: CCGGGCCCAGGCGTGGCAGCAGGGGAGCTGTGCGTC...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCACTGGGCTGGCACGGTaGGCAGCCCGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: APGFTPWSAGSTGRGTQATGLAR*AARPWA
Trigger: AGCCCAGGGCCGGGCTGCCCACCGTGCCAGCCCAGT...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGACTGGGCTGGCACGGTaGGCAGCCCGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGGSYSAAHASTRPSSPGTGLAR*AARPWA
Trigger: AGCCCAGGGCCGGGCTGCCCACCGTGCCAGCCCAGT...CCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CGTCTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCGGATGGGCTGGCCACTaGCTGGCTCCGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: RLLQSQGAPDRVQRGWARGWAGH*LAPDAR
Trigger: GCGGGCATCCGGAGCCAGGCAGTGGCCAGCCCATCC...GCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGCAGGTGGGCGGCGTaGCCACGACCAGGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: AGRHRICPSDRRRLLQSQGRWAA*PRPGSA
Trigger: TGCCGACCCTGGTCGTGGGCACGCCGCCCACCTGCC...CTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCTGGGGGCCGGCCCTCTaGACGCCGGAGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPWGPAL*TPELLQ
Trigger: CTGGAGCAGCTCCGGCGTGCAGAGGGCCGGCCCCCA...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGCCTCTGCCCTTGCCCTaGGGGCCGGCCCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: GATESAPPTDGVSSSPREPLPLP*GPALCT
Trigger: CGTGCAGAGGGCCGGCCCCCAGGGCAAGGGCAGAGG...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCGCATGGCCGCGGGGCTaGGGGGAGAGCAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCAWPRG*GESRCK
Trigger: CTTGCACCTGCTCTCCCCTCAGCCCCGCGGCCATGC...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCCGAGAGGCGGCCCGATaGCACCGAGCTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: APGFTPWSAGSTGRGTQAREAAR*HRAVPI
Trigger: GATGGGGACAGCTCGGTGTCATCGGGCCGCCTCTCG...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCACAGCTGGGTCCCTaGCGGTGTCCAGCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSPQLGP*RCPALR
Trigger: CCGAAGCGCTGGACACCGTCAGGGACCCAGCTGTGG...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCCAACCTGGCCCGCCCTaGCTGGGGTCGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSQPGPP*LGSLLP
Trigger: AGGCAGCAGCGACCCCAGGCAGGGCGGGCCAGGTTG...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CGTCTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCTGGAGGGGGCTGAGGTaGCCAGGGACGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLLQSQGAPDRVQRGWARWRGLR*PGTHSS
Trigger: GGAGCTGTGCGTCCCTGGGCACCTCAGCCCCCTCCA...GCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CGTCTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCGCTCTTGCCCTCCCTTaGGGGCCTGGGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLLQSQGAPDRVQRGWARALALP*GPGPAP
Trigger: TGGAGCTGGCCCAGGCCCGCAAGGGAGGGCAAGAGC...GCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCCGATGCCTCTGCCCTTaGCCTGGGGGCCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPRCLCP*PGGRPS
Trigger: AGAGGGCCGGCCCCCAGGGCAAGGGCAGAGGCATCG...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCACCACGGGGACCGCCCTaGCGAGGACGGCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RVLQRSPRQHEALKPRASPRGPP*RGRPPS
Trigger: AGAGGGAGGCCGTCCTCGGCAGGGCGGTCCCCGTGG...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCGAGCCCCAGATAGGGTaGAGCGTGGCTGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGEPQIG*SVAGPA
Trigger: TGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTC...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCTGTCCCCCAGGCAGGTaGGCGGCGTGCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSCPPGR*AACPRP
Trigger: TGGTCGTGGGCACGCCGCCCACCTGCCTGGGGGACA...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCGTCGGCTGCTCTCCCTaGGGCCCCATGGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PSQEGPTAQPTPARGPQAVGCSP*GPMGEG
Trigger: CCCTTCTCCCATGGGGCCCCAGGGAGAGCAGCCGAC...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CGTCTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCGGGCTCCCAGGCCTCTaGGAGGAGGGGCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RLLQSQGAPDRVQRGWARGLPGL*EEGPCL
Trigger: AAGACAGGGCCCCTCCTCCCAGAGGCCTGGGAGCCC...GCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCGGGCTCCCAGGCCTCTaGGAGGAGGGGCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PSQEGPTAQPTPARGPQAGLPGL*EEGPCL
Trigger: AAGACAGGGCCCCTCCTCCCAGAGGCCTGGGAGCCC...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCACCTCTGCCCTTGCCCTaGGGGCCGGCCCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: RVLQRSPRQHEALKPRASPLPLP*GPALCT
Trigger: CGTGCAGAGGGCCGGCCCCCAGGGCAAGGGCAGAGG...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGCAGGGCAGGCTGGGGTaGCAAGCGTGGGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: AGRHRICPSDRRRLLQSQQGRLG*QAWGWR
Trigger: TCGCCACCCCCACGCTTGCCACCCCAGCCTGCCCTG...CTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCCTGCAGCCCCACCTATaGCCCTGCCCGGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCLQPHL*PCPGWA
Trigger: AGCCCATCCCGGGCAGGGTCATAGGTGGGGCTGCAG...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp CCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCCTGCAGCTTGGCGGTaGGGCTATCGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGGSYSAAHASTRPSSPGPAAWR*GYRPAA
Trigger: AGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGG...CCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCCCACAGCTGGGTCCCTaGCGGTGTCCAGCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPPQLGP*RCPALR
Trigger: CCGAAGCGCTGGACACCGTCAGGGACCCAGCTGTGG...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGGATGGGCTGGCCACTaGCTGGCTCCGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: RVLQRSPRQHEALKPRASGWAGH*LAPDAR
Trigger: GCGGGCATCCGGAGCCAGGCAGTGGCCAGCCCATCC...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGCCCAACCTGGCCCGCCCTaGCTGGGGTCGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGSGRCSRWMPRPPDQPAQPGPP*LGSLLP
Trigger: AGGCAGCAGCGACCCCAGGCAGGGCGGGCCAGGTTG...GGCTGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCAGCCTTCCAGTCGGCTaGTCTCCCTGGGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: PSQEGPTAQPTPARGPQASLPVG*SPWGPM
Trigger: CATGGGGCCCCAGGGAGAGCAGCCGACTGGAAGGCT...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGACCACGTGGGGAGCTaGCCAGGGTGGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AGRHRICPSDRRRLLQSQDHVGS*PGWVWL
Trigger: CAGCCAGACCCACCCTGGGCAGCTCCCCACGTGGTC...CTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCACCACATGGGCAGGCTaGACGCCTTCCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: APGFTPWSAGSTGRGTQATTWAG*TPSPRV
Trigger: GACCCTGGGGGAAGGCGTGCAGCCTGCCCATGTGGT...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGGATGGCCCGAGCTCTTaGCCTCCCTTGCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GATESAPPTDGVSSSPREDGPSS*PPLRAW
Trigger: CCAGGCCCGCAAGGGAGGGCAAGAGCTCGGGCCATC...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCACAGCACTCCAGGGCTaGTGGGGGAAGGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSTALQG*WGKGLR
Trigger: GCGGAGCCCCTTCCCCCAGCAGCCCTGGAGTGCTGT...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGACGGGGGAGCCGATaGCTCTGCCCTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPRRGSR*LCPCPG
Trigger: CCCAGGGCAAGGGCAGAGGCATCGGCTCCCCCGTCT...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCACCACGGGGACCGCCCTaGCGAGGACGGCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VLGSGRCSRWMPRPPDQPPRGPP*RGRPPS
Trigger: AGAGGGAGGCCGTCCTCGGCAGGGCGGTCCCCGTGG...TGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCGGCCTGTGGACCACATaGGCAGGCTGCACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: APGFTPWSAGSTGRGTQAGLWTT*AGCTPS
Trigger: GGAAGGCGTGCAGCCTGCCCATGTGGTCCACAGGCC...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGGGCCTGTGGACCACATaGGCAGGCTGCACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PGGSYSAAHASTRPSSPGGLWTT*AGCTPS
Trigger: GGAAGGCGTGCAGCCTGCCCATGTGGTCCACAGGCC...CCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCCCTGCTGCCACGCCTaGGCCCGGATCTTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PSQEGPTAQPTPARGPQAPCCHA*ARILSL
Trigger: GAGAGACAAGATCCGGGCCCAGGCGTGGCAGCAGGG...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGGAGAGCTCGCGCCCCTaGCCGTGGGATGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GATESAPPTDGVSSSPREESSRP*PWDALA
Trigger: AGCCAAGGCATCCCACGGCCAGGGGCGCGAGCTCTC...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCTCACGATGCCAGGGGTaGTCCGGGAGACCACGGGGA +
Preference number: 4 (lower is better)
Translates to: APGFTPWSAGSTGRGTQASRCQG*SGRPRG
Trigger: TCCCCGTGGTCTCCCGGACCACCCCTGGCATCGTGA...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTCACGATGCCAGGGGTaGTCCGGGAGACCACGGGGA +
Preference number: 4 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGSRCQG*SGRPRG
Trigger: TCCCCGTGGTCTCCCGGACCACCCCTGGCATCGTGA...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCGGCTTGCTCTCGCAGTaGGCCCTCGGGCTCACACTC +
Preference number: 4 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSGLLSQ*ALGLTL
Trigger: GAGTGTGAGCCCGAGGGCCCACTGCGAGAGCAAGCC...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGCGGCTTCGAGGCCTaGAGCCCCACCTATGACCCT +
Preference number: 4 (lower is better)
Translates to: AGRHRICPSDRRRLLQSQGGFEA*SPTYDP
Trigger: AGGGTCATAGGTGGGGCTGCAGGCCTCGAAGCCGCC...CTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCGCCTGGGGTCGCTGCTaGCTTCACATGGCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPAWGRC*LHMAAS
Trigger: CGAAGCCGCCATGTGAAGGCAGCAGCGACCCCAGGC...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCCCTGCCTGGGGTCGCTaGTGCCTTCACATGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSPAWGR*CLHMAA
Trigger: AGCCGCCATGTGAAGGCAGCAGCGACCCCAGGCAGG...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCCACGTCATCCTCAGCTaGAGGTGCGCAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: APGFTPWSAGSTGRGTQAHVILS*RCAEPG
Trigger: CCCAGGCTCTGCGCACCTGCAGCTGAGGATGACGTG...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGGACCACGTGGGGAGCTaGCCAGGGTGGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLDHVGS*PGWVWL
Trigger: CAGCCAGACCCACCCTGGGCAGCTCCCCACGTGGTC...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCCGGACAGGACTCCCGTaGAGTGGAGGAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSRTGLP*SGGAPG
Trigger: CCCTGGAGCTCCTCCACTGCACGGGAGTCCTGTCCG...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCTGCGGACTGCAGGCCTaGCCAGCCAGTGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSCGLQA*PASALQ
Trigger: CTGGAGTGCACTGGCTGGGCAGGCCTGCAGTCCGCA...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGAGACGGGGGAGCCGATaGCTCTGCCCTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLRRGSR*LCPCPG
Trigger: CCCAGGGCAAGGGCAGAGGCATCGGCTCCCCCGTCT...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCATGCCGCCGCCGGGCCTaGGCCTTCTGGCGCATGAAC +
Preference number: 4 (lower is better)
Translates to: VLGSGRCSRWMPRPPDQPCRRRA*AFWRMN
Trigger: GTTCATGCGCCAGAAGGCGCAGGCCCGGCGGCGGCA...TGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCAGCGCTTCGGCACCCTaGAGCTTGGCGGTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSSASAP*SLAVRL
Trigger: TAGCCTCACCGCCAAGCTGCAGGGTGCCGAAGCGCT...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCCTCGGGCTCACACTCTaGTGTTGCTCCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGLGLTL*CCSQLG
Trigger: CCCCAGCTGGGAGCAACAGCAGAGTGTGAGCCCGAG...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGGGCGCCACAGAATCTaGCCCTCCGACCGACGGCGT +
Preference number: 4 (lower is better)
Translates to: RVLQRSPRQHEALKPRASGRHRI*PSDRRR
Trigger: ACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCC...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCTCAGTTCCCATGGCTaGACCAGCCCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSQEGPTAQPTPARGPQALSSHG*TSPSSC
Trigger: GCAGCTGGAGGGGCTGGTGCAGCCATGGGAACTGAG...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TTGGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGCTGGCCCGCCCTGCCTaGGGTCGCTGCTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LEKRAPGFTPWSAGSTGRLARPA*GRCCLH
Trigger: GTGAAGGCAGCAGCGACCCCAGGCAGGGCGGGCCAG...CCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGTGTCCCCCAGGCAGGTaGGCGGCGTGCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: RVLGSGRCSRWMPRPPDQCPPGR*AACPRP
Trigger: TGGTCGTGGGCACGCCGCCCACCTGCCTGGGGGACA...CTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCAAGGGGCCCTGCCTCTaGCTGTTCTTGTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSQEGPTAQPTPARGPQAKGPCL*LFLWQG
Trigger: GCCCTGCCACAAGAACAGCCAGAGGCAGGGCCCCTT...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CGTCTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCCGCAGAGCCTGGGCTTaGCAACAGCCTTCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: RLLQSQGAPDRVQRGWARRRAWA*QQPSSR
Trigger: CCGACTGGAAGGCTGTTGCCAAGCCCAGGCTCTGCG...GCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCGCAGAGCCTGGGCTTaGCAACAGCCTTCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: PGGSYSAAHASTRPSSPGRRAWA*QQPSSR
Trigger: CCGACTGGAAGGCTGTTGCCAAGCCCAGGCTCTGCG...CCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCAGGTGCGCAGAGCCTaGGCTTGGCAACAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSQVRRA*AWQQPS
Trigger: GGAAGGCTGTTGCCAAGCCCAGGCTCTGCGCACCTG...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGTTTCTGGGCCTCTGCTaGGGCCCCAACACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGGSYSAAHASTRPSSPGFLGLC*GPNTWG
Trigger: ACCCCAGGTGTTGGGGCCCCAGCAGAGGCCCAGAAA...CCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGTGGCCCAACCTCTCATaGGGACTCTCCGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PGGSYSAAHASTRPSSPGWPNLS*GLSGLW
Trigger: CCAGAGGCCGGAGAGTCCCCATGAGAGGTTGGGCCA...CCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCAGTCCAGGCCCTCCGTaGACAGGGCTGTGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSSPGPP*TGLCGY
Trigger: GTAGCCACACAGCCCTGTCCACGGAGGGCCTGGACT...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCGGGGTAGGTAGCGGGTaGTCAGGTCCTGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSQEGPTAQPTPARGPQAGVGSG*SGPGAP
Trigger: TGGAGCTCCAGGACCTGACCACCCGCTACCTACCCC...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGGGAAGGTGTTCTCGGTaGATGCCCCGGCCACCCGAC +
Preference number: 4 (lower is better)
Translates to: GATESAPPTDGVSSSPREGRCSR*MPRPPD
Trigger: GTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCC...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCGGCTTCAGCAGCTGCTaGGTCCCTTGGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSGFSSC*VPWAPG
Trigger: GCCTGGTGCCCAAGGGACCCAGCAGCTGCTGAAGCC...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATACCTGCCTGGGGTCGCTaGTGCCTTCACATGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARIPAWGR*CLHMAA
Trigger: AGCCGCCATGTGAAGGCAGCAGCGACCCCAGGCAGG...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCCACGTCATCCTCAGCTaGAGGTGCGCAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSHVILS*RCAEPG
Trigger: CCCAGGCTCTGCGCACCTGCAGCTGAGGATGACGTG...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATAGGGCCACCTCAGGGCTaGCACGTCATCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARIGPPQG*HVILSC
Trigger: GCAGCTGAGGATGACGTGGCAGCCCTGAGGTGGCCC...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGCTCTTTCTGGGCCTCTaGTGGGGCCCCAACACCTGG +
Preference number: 4 (lower is better)
Translates to: GATESAPPTDGVSSSPRELFLGL*WGPNTW
Trigger: CCAGGTGTTGGGGCCCCAGCAGAGGCCCAGAAAGAG...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCGGGCATTGGGGTCCCTaGAGCAGCCCCTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPSSSARQWKVFSVDAPAGHWGP*SSPSLP
Trigger: TGGCAGGGAGGGGCTGCTGCAGGGACCCCAATGCCC...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATATGCGGACTGCAGGCCTaGCCAGCCAGTGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARICGLQA*PASALQ
Trigger: CTGGAGTGCACTGGCTGGGCAGGCCTGCAGTCCGCA...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGACAGCACTCCAGGGCTaGTGGGGGAAGGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RVLGSGRCSRWMPRPPDQTALQG*WGKGLR
Trigger: GCGGAGCCCCTTCCCCCAGCAGCCCTGGAGTGCTGT...CTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp AGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGATCTGCACGCCGGAGCTaGTCCAGGGCCGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSARQWKVFSVDAPATRSARRS*SRAAGL
Trigger: CAGCCCAGCGGCCCTGGAGCAGCTCCGGCGTGCAGA...TCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAACACAGGCAGAAGCTaGCTGGGGCTTCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPNTGRS*LGLPGP
Trigger: GGGGCCAGGAAGCCCCAGGCAGCTTCTGCCTGTGTT...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCTCTAGCGCCTGCAGCTaGGCCTGCTTATGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCSSACS*ACLCRR
Trigger: CCTCCGGCATAAGCAGGCGCAGCTGCAGGCGCTAGA...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGCCACACACCTCGGGGCTTaGTCTCGCAGTGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LGSGRCSRWMPRPPDQPATHLGA*SRSGPS
Trigger: CGAGGGCCCACTGCGAGAGCAAGCCCCGAGGTGTGT...GGCTGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGGGGCGCCACAGAATCTaGCCCTCCGACCGACGGCGT +
Preference number: 4 (lower is better)
Translates to: RVLGSGRCSRWMPRPPDQGRHRI*PSDRRR
Trigger: ACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCC...CTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGGGTGTTCTCGGTGGATaGCCCGGCCACCCGACCAGC +
Preference number: 4 (lower is better)
Translates to: RVLGSGRCSRWMPRPPDQGVLGG*PGHPTS
Trigger: GCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACC...CTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCCCGAGGGCCCATCACTaGAGGTGTGGTGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGPRAHH*RCGEHR
Trigger: TCTGTGCTCACCACACCTGCAGTGATGGGCCCTCGG...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCCAGGGCTTCAGCAGCTaGTGGGTCCCTTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCQGFSS*WVPWAP
Trigger: TGGTGCCCAAGGGACCCAGCAGCTGCTGAAGCCCTG...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCACCTGCGCCGGTCCCCTaGCCCACGATGGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: VLGSGRCSRWMPRPPDQPPAPVP*PTMETL
Trigger: GAGGGTTTCCATCGTGGGCCAGGGGACCGGCGCAGG...TGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGTCGGCTGCTCTCCCTaGGGCCCCATGGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VLGSGRCSRWMPRPPDQPVGCSP*GPMGEG
Trigger: CCCTTCTCCCATGGGGCCCCAGGGAGAGCAGCCGAC...TGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCGGCCGTGGGATGCCTTaGCTTCAACTCTGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSGRGMP*LQLCAQ
Trigger: CTGAGCGCAGAGTTGAAGCCAAGGCATCCCACGGCC...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp AGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGAGGTGCTGGGAGACCCTaGAGAGCTCGCGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSSARQWKVFSVDAPATRGAGRP*RARAPG
Trigger: GCCAGGGGCGCGAGCTCTCCAGGGTCTCCCAGCACC...TCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGGAGGGATCCTTGCTATaGTGCCTGCGGAGGACGGGA +
Preference number: 4 (lower is better)
Translates to: PGGSYSAAHASTRPSSPGEGSLL*CLRRTG
Trigger: TCCCGTCCTCCGCAGGCACCATAGCAAGGATCCCTC...CCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCGTGGCATCGGGCAACTaGGCACAAACCGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: APGFTPWSAGSTGRGTQAVASGN*AQTGEH
Trigger: GTGCTCACCGGTTTGTGCCCAGTTGCCCGATGCCAC...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCCCATGGCCGTCTGTATaGTCGCTGGCTGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: APGFTPWSAGSTGRGTQAPWPSV*SLAGRR
Trigger: CCTTCGACCAGCCAGCGACCATACAGACGGCCATGG...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGAGCTCCAGCCCAGCCTaGATTTGCTGGCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PGGSYSAAHASTRPSSPGSSSPA*ICWRRS
Trigger: AGACCTGCGCCAGCAAATCCAGGCTGGGCTGGAGCT...CCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGACTCTCCGGCCTCTaGAAGGAGCGGTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: AGRHRICPSDRRRLLQSQGLSGL*KERSCP
Trigger: AGGACAGGACCGCTCCTTCCAGAGGCCGGAGAGTCC...CTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCGGCCTCTGGGAGAAGTaGCCCAACCTCTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSGLWEK*PNLSWG
Trigger: TCCCCATGAGAGGTTGGGCCACTTCTCCCAGAGGCC...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCGTGGACAGGGCTGTGTaGCTACAGCACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGVDRAV*LQHSRA
Trigger: AGCCCTGGAGTGCTGTAGCCACACAGCCCTGTCCAC...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGTCCAGGCCCTCCGTaGACAGGGCTGTGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPSPGPP*TGLCGY
Trigger: GTAGCCACACAGCCCTGTCCACGGAGGGCCTGGACT...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCCGGGTGGTCAGGTCCTaGAGCTCCAGGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPRVVRS*SSRDPR
Trigger: TCTGGGATCCCTGGAGCTCCAGGACCTGACCACCCG...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTCTGGGGTGGCAAGCGTaGGGGTGGCGAGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPLGWQA*GWRAWG
Trigger: CCCCCACGCTCGCCACCCCCACGCTTGCCACCCCAG...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCGCTGTTGCTCCCAGCTaGGGCCCCACGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCAVAPS*GPTTVS
Trigger: AGACACTGTCGTGGGGCCCCAGCTGGGAGCAACAGC...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGCCCCTGGCTTCACTCCCTaGTCAGCCGGGAGCACGGGA +
Preference number: 4 (lower is better)
Translates to: LGSGRCSRWMPRPPDQPAPGFTP*SAGSTG
Trigger: TCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGG...GGCTGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGGGAAGGTGTTCTCGGTaGATGCCCCGGCCACCCGAC +
Preference number: 4 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLGRCSR*MPRPPD
Trigger: GTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCC...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCCACACTCAGTTCCCATaGCTGCACCAGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGHTQFP*LHQPLQ
Trigger: CTGGAGGGGCTGGTGCAGCCATGGGAACTGAGTGTG...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTCAGCCGCCCCGGGGCTaGAGAAGGCAGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSQPPRG*RRQAGS
Trigger: GGACCCAGCCTGCCTTCTCCAGCCCCGGGGCGGCTG...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCCCTCAGGTGGGTCATTaGAACTGGGCTGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCPQVGH*NWAGTV
Trigger: CACCGTGCCAGCCCAGTTTCAATGACCCACCTGAGG...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATACTCCTAAGTCCACGGTaGGAGCCGGGTCTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARILLSPR*EPGLSR
Trigger: CCTCGAGAGACCCGGCTCTCACCGTGGACTTAGGAG...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCCCTGCAGCTTGGCGGTaGGGCTATCGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPSSSARQWKVFSVDAPAPAAWR*GYRPAA
Trigger: AGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGG...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCGGGCCTGGCTTCAGGTaGCCGTCCCGCGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFGPGFR*PSRGAG
Trigger: GCCGGCTCCGCGGGACGGTCACCTGAAGCCAGGCCC...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGCCGGATCCTTGCTATGGTaGCTGCGGAGGACGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LGSGRCSRWMPRPPDQPAGSLLW*LRRTGG
Trigger: CCCTCCCGTCCTCCGCAGGCACCATAGCAAGGATCC...GGCTGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGGATCCTTGCTATGGTaGCTGCGGAGGACGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RVLQRSPRQHEALKPRASGSLLW*LRRTGG
Trigger: CCCTCCCGTCCTCCGCAGGCACCATAGCAAGGATCC...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTTGCCGCCGCCGGGCCTaGGCCTTCTGGCGCATGAAC +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSCRRRA*AFWRMN
Trigger: GTTCATGCGCCAGAAGGCGCAGGCCCGGCGGCGGCA...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCTTGGGTCCAGGTAGATaGACATCCCCCGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PSQEGPTAQPTPARGPQALGPGR*TSPGVG
Trigger: ACCTACCCCGGGGGATGTGCATCTACCTGGACCCAA...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCGTGGTCTCTAGCGCCTaGAGCTGCGCCTGCTTATGC +
Preference number: 4 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCVVSSA*SCACLC
Trigger: GCATAAGCAGGCGCAGCTGCAGGCGCTAGAGACCAC...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATACTCGGGCTCACACTCTaGTGTTGCTCCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARILGLTL*CCSQLG
Trigger: CCCCAGCTGGGAGCAACAGCAGAGTGTGAGCCCGAG...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTCCAGCTCTGCCCGCTaGCGCAGGAGGGCCAACGCC +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSSSSAR*RRRANA
Trigger: GGCGTTGGCCCTCCTGCGGCAGCGGGCAGAGCTGGA...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATAAAGGGGCCCTGCCTCTaGCTGTTCTTGTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARIKGPCL*LFLWQG
Trigger: GCCCTGCCACAAGAACAGCCAGAGGCAGGGCCCCTT...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCGCGCGTCACTCTTTCTaGGCCTCTGCTGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GPSSSARQWKVFSVDAPAARHSF*ASAGAP
Trigger: TGGGGCCCCAGCAGAGGCCCAGAAAGAGTGACGCGC...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCGGCCGTGGGATGCCTTaGCTTCAACTCTGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPGRGMP*LQLCAQ
Trigger: CTGAGCGCAGAGTTGAAGCCAAGGCATCCCACGGCC...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCCGTCTGTATGGTCGCTaGCTGGTCGAAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: APGFTPWSAGSTGRGTQARLYGR*LVEGSQ
Trigger: CTGGCTTCCTTCGACCAGCCAGCGACCATACAGACG...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGGACTCTCCGGCCTCTaGAAGGAGCGGTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RVLQRSPRQHEALKPRASGLSGL*KERSCP
Trigger: AGGACAGGACCGCTCCTTCCAGAGGCCGGAGAGTCC...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATATGGCCCAACCTCTCATaGGGACTCTCCGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARIWPNLS*GLSGLW
Trigger: CCAGAGGCCGGAGAGTCCCCATGAGAGGTTGGGCCA...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGGTGGACAGGGCTGTGTaGCTACAGCACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GATESAPPTDGVSSSPREVDRAV*LQHSRA
Trigger: AGCCCTGGAGTGCTGTAGCCACACAGCCCTGTCCAC...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp AGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGAGAGGGTTCCGCAGTCTaGGGCCAGGGTCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSSARQWKVFSVDAPATREGSAV*GQGPPR
Trigger: CCTGGGAGGACCCTGGCCCCAGACTGCGGAACCCTC...TCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCTTGGCAGGGCATGCTTaGCAGCCGAGACGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GPSSSARQWKVFSVDAPALAGHA*QPRRGS
Trigger: GCTCCCCCGTCTCGGCTGCCAAGCATGCCCTGCCAA...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GAAAACCTTGGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACCTGGGGTGGCAAGCGTaGGGGTGGCGAGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ENLGEEGTWLHSLVSREHLGWQA*GWRAWG
Trigger: CCCCCACGCTCGCCACCCCCACGCTTGCCACCCCAG...GTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAAGGTTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCCGCAGCAGCGCGGCCTaGTGCTGTGCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPRSSAA*CCARSS
Trigger: GGAGCTGCGAGCACAGCACCAGGCCGCGCTGCTGCG...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCCTCGGCGGGAAAGGCTaGGCCCAGCCGCTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSLGGKG*AQPLSV
Trigger: GACGGACAGCGGCTGGGCCCAGCCTTTCCCGCCGAG...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CAA 72 bp CGGCCGTGCGGGCTGCGCAGAAATGACCTTGGGCCCTaGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RPCGLRRNDLGP*SRGFLWSVQLR
Trigger: CCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCACGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CAA 72 bp ACGCTGGTTCCAGCTGTGACTGCAGCCGCCACCGCATaGCGCCGCACGTCAGCACCAACCACGTGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: TLVPAVTAAATA*RRTSAPTTWQR
Trigger: TCGCTGCCACGTGGTTGGTGCTGACGTGCGGCGCAATGCGGTGGCGGCTGCAGTCACAGCTGGAACCAGCGT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTCGAGAGGCGGCCCGATaGCACCGAGCTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPREAAR*HRAVPI
Trigger: GATGGGGACAGCTCGGTGTCATCGGGCCGCCTCTCG...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAAGGGCGCGTGGCCTTTaGGCTTGCGGGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERRARGL*ACGAAL
Trigger: CAGAGCAGCCCCGCAAGCTCAAAGGCCACGCGCCCT...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTGGACCCTGCCGCAGGTaGGGCAGTGTCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPGPCRR*GSVQEL
Trigger: GAGCTCCTGGACACTGCCTCACCTGCGGCAGGGTCC...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCATCCTCAGCTGCAGGTaGGCAGAGCCTGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GPSSSARQWKVFSVDAPAILSCR*AEPGLG
Trigger: GCCAAGCCCAGGCTCTGCGCACCTGCAGCTGAGGAT...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCATCTTGTCTCTCAGCTaGTCCAGCCGCGCGTCACTC +
Preference number: 4 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCILSLS*SSRASL
Trigger: GAGTGACGCGCGGCTGGAGCAGCTGAGAGACAAGAT...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCCCAGCCTGGATTTaGTGGCGCAGGTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSSPAWI*WRRSCR
Trigger: CCTACAAGACCTGCGCCAGCAAATCCAGGCTGGGCT...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACGCTCTTGCCCTCCCTTaGGGGCCTGGGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHALALP*GPGPAP
Trigger: TGGAGCTGGCCCAGGCCCGCAAGGGAGGGCAAGAGC...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAGGGCATTGGGGTCCCTaGAGCAGCCCCTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERGHWGP*SSPSLP
Trigger: TGGCAGGGAGGGGCTGCTGCAGGGACCCCAATGCCC...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGTTGGGGGCCGGCCCTCTaGACGCCGGAGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GHQAVGTARWKPRMKTLSWGPAL*TPELLQ
Trigger: CTGGAGCAGCTCCGGCGTGCAGAGGGCCGGCCCCCA...ACTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCTGGGGGCCGGCCCTCTaGACGCCGGAGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPWGPAL*TPELLQ
Trigger: CTGGAGCAGCTCCGGCGTGCAGAGGGCCGGCCCCCA...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGTGGGCTGGGTGCCGCCGCCGGGCCTaGGCCTTCTGGCGCATGAAC +
Preference number: 4 (lower is better)
Translates to: SRIRADGTVRKRPRRWAGCRRRA*AFWRMN
Trigger: GTTCATGCGCCAGAAGGCGCAGGCCCGGCGGCGGCA...CCCAGCCCACCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCCCACGGGGACCGCCCTaGCGAGGACGGCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSPRGPP*RGRPPS
Trigger: AGAGGGAGGCCGTCCTCGGCAGGGCGGTCCCCGTGG...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCACAGGCCCCCGGACTGTaGAGAACTGGGGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: RVLQRSPRQHEALKPRASQAPGL*RTGDKG
Trigger: ACCTTTGTCCCCAGTTCTGCACAGTCCGGGGGCCTG...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTGCCAGAGGTCACTTTaGTCCATTCCAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGCQRSL*SIPALG
Trigger: CCCCAGTGCTGGAATGGAGCAAAGTGACCTCTGGCA...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCTGGAAGTGCCCAGGTaGTCAGCCTCCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLLEVPR*SASFGS
Trigger: GGACCCAAAGGAGGCTGAGCACCTGGGCACTTCCAG...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCATCTAGCGCCTGCAGCTaGGCCTGCTTATGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: VLGSGRCSRWMPRPPDQPSSACS*ACLCRR
Trigger: CCTCCGGCATAAGCAGGCGCAGCTGCAGGCGCTAGA...TGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATAGTGGTCTCTAGCGCCTaGAGCTGCGCCTGCTTATGC +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARIVVSSA*SCACLC
Trigger: GCATAAGCAGGCGCAGCTGCAGGCGCTAGAGACCAC...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACAGCAGCGCGGCCTGGTaGTGTGCTCGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHSSAAW*CARSSS
Trigger: GGAGGAGCTGCGAGCACAGCACCAGGCCGCGCTGCT...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCGGGCTGGAACCCTGCTaGAGCTTGGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSGLEPC*SLAWAC
Trigger: GCAGGCCCAGGCCAAGCTGCAGCAGGGTTCCAGCCC...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTGGGCACCCTACCACCTaGCAGCGACGCGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPGHPTT*QRREAP
Trigger: AGGTGCCTCGCGTCGCTGGCAGGTGGTAGGGTGCCC...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTGGGCTGGCCACTGCCTaGCTCCGGATGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PWAPGSGHCSLETPDENTGLATA*LRMPAC
Trigger: GCAGGCGGGCATCCGGAGCCAGGCAGTGGCCAGCCC...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCCTTCCCCCAGGGTCCTaGTTCCTTGAGGTCGTCAGA +
Preference number: 4 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSLPPGS*FLEVVR
Trigger: TCTGACGACCTCAAGGAACCAGGACCCTGGGGGAAG...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCATGGGGCCCCAACACCTaGGGTGGCCTCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VLGSGRCSRWMPRPPDQPWGPNT*GGLSFQ
Trigger: TTGGAAGGAGAGGCCACCCCAGGTGTTGGGGCCCCA...TGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATAACAGGAACCTGGTGCTaGGAGACCCTGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARITGTWC*ETLESS
Trigger: CGAGCTCTCCAGGGTCTCCCAGCACCAGGTTCCTGT...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGTGGCATCGGGCAACTaGGCACAAACCGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RVLQRSPRQHEALKPRASVASGN*AQTGEH
Trigger: GTGCTCACCGGTTTGTGCCCAGTTGCCCGATGCCAC...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGTGTATGGTCGCTGGCTaGTCGAAGGAAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GATESAPPTDGVSSSPRECMVAG*SKEARL
Trigger: CAGCCTGGCTTCCTTCGACCAGCCAGCGACCATACA...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCCGTCTGTATGGTCGCTaGCTGGTCGAAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCRLYGR*LVEGSQ
Trigger: CTGGCTTCCTTCGACCAGCCAGCGACCATACAGACG...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCACCATGGCCGTCTGTATaGTCGCTGGCTGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RVLQRSPRQHEALKPRASPWPSV*SLAGRR
Trigger: CCTTCGACCAGCCAGCGACCATACAGACGGCCATGG...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGCCGGCCTCTGGGAGAAGTaGCCCAACCTCTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LGSGRCSRWMPRPPDQPAGLWEK*PNLSWG
Trigger: TCCCCATGAGAGGTTGGGCCACTTCTCCCAGAGGCC...GGCTGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp AGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGAGAGGGAAGCTCCCGGTaGGCCTTGGCAGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: SSSARQWKVFSVDAPATREGSSR*ALAGHA
Trigger: AGCATGCCCTGCCAAGGCCCACCGGGAGCTTCCCTC...TCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCACTGGGGTGGCAAGCGTaGGGGTGGCGAGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPLGWQA*GWRAWG
Trigger: CCCCCACGCTCGCCACCCCCACGCTTGCCACCCCAG...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCGCTGTTGCTCCCAGCTaGGGCCCCACGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GPSSSARQWKVFSVDAPAAVAPS*GPTTVS
Trigger: AGACACTGTCGTGGGGCCCCAGCTGGGAGCAACAGC...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGGCTTGCTCTCGCAGTaGGCCCTCGGGCTCACACTC +
Preference number: 4 (lower is better)
Translates to: QARVLGSGRCSRWMPRPPGLLSQ*ALGLTL
Trigger: GAGTGTGAGCCCGAGGGCCCACTGCGAGAGCAAGCC...GGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGACTTGCGGGGCTGCTCTaGGGGCGATGGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERLAGLL*GRWLVE
Trigger: CTCCACCAGCCATCGCCCCCAGAGCAGCCCCGCAAG...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTGAGGGAGGAGCCACCTaGGGCTCCACGCCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPEGGAT*GSTPLP
Trigger: TGGAAGCGGCGTGGAGCCCCAGGTGGCTCCTCCCTC...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCCCCCTCCCCAGGCCATaGGGACGGAAGAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSPLPRP*GRKSHL
Trigger: CAGGTGGCTCTTCCGTCCCCATGGCCTGGGGAGGGG...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTCAAGGGCACTTGGCCTaGGAGAGAGGCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSQGHLA*ERGCRG
Trigger: GCCCCGGCAGCCTCTCTCCCAGGCCAAGTGCCCTTG...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGAGGGTCCTGGTTCCTTaGGGTCGTCAGACCCGACCA +
Preference number: 4 (lower is better)
Translates to: RVLGSGRCSRWMPRPPDQRVLVP*GRQTRP
Trigger: TGGTCGGGTCTGACGACCTCAAGGAACCAGGACCCT...CTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp CTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGCCCTGGGCACAAACCGGTaGGCACTTGGCAGCTATGAC +
Preference number: 4 (lower is better)
Translates to: LGSGRCSRWMPRPPDQPALGTNR*ALGSYD
Trigger: GTCATAGCTGCCAAGTGCTCACCGGTTTGTGCCCAG...GGCTGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCTATCGACCCGCTGCTTaGGGACTTTGGCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPYRPAA*GLWLWS
Trigger: AGACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATA...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACCCTGCAGCTTGGCGGTaGGGCTATCGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHPAAWR*GYRPAA
Trigger: AGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGG...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCAGGCTGGGCCCGCATATaGGCTCCCCGCAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPGWARI*APRRGA
Trigger: AGCCCCTCTGCGGGGAGCTCATATGCGGGCCCAGCC...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCGGGGCATGGCTGTCATaGAATAAGCACGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCGAWLS*NKHVGL
Trigger: GAGACCCACGTGCTTATTTCATGACAGCCATGCCCC...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp CCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCAAGTCGAATCCGAGCTaGTGGGACTGTAAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PSQEGPTAQPTPARGPQAKSNPS*WDCKEA
Trigger: CGCTTCCTTACAGTCCCATCAGCTCGGATTCGACTT...GGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGCCGGGGACCTCCTGCTaGCAGGCCTCCGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQPGTSC*QASVLC
Trigger: GCAGAGGACGGAGGCCTGTCAGCAGGAGGTCCCCGG...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTTCCAGGGGCACTGCCTaGCCCCTCACACGACGAGTG +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSSRGTA*PLTRRV
Trigger: CACTCGTCGTGTGAGGGGTCAGGCAGTGCCCCTGGA...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGCAACCTGGCCCGCCCTaGCTGGGGTCGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQQPGPP*LGSLLP
Trigger: AGGCAGCAGCGACCCCAGGCAGGGCGGGCCAGGTTG...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTGGGCCACCTCAGGGCTaGCACGTCATCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSGPPQG*HVILSC
Trigger: GCAGCTGAGGATGACGTGGCAGCCCTGAGGTGGCCC...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACACCACATGGGCAGGCTaGACGCCTTCCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHTTWAG*TPSPRV
Trigger: GACCCTGGGGGAAGGCGTGCAGCCTGCCCATGTGGT...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATAATCTTGTCTCTCAGCTaGTCCAGCCGCGCGTCACTC +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARIILSLS*SSRASL
Trigger: GAGTGACGCGCGGCTGGAGCAGCTGAGAGACAAGAT...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCCTCCCTGCCACGTCCTaGAGCCTCCGCTTTGATGGC +
Preference number: 4 (lower is better)
Translates to: QARVLGSGRCSRWMPRPPLPATS*SLRFDG
Trigger: GCCATCAAAGCGGAGGCTGCAGGACGTGGCAGGGAG...GGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTTGCGGACTGCAGGCCTaGCCAGCCAGTGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPCGLQA*PASALQ
Trigger: CTGGAGTGCACTGGCTGGGCAGGCCTGCAGTCCGCA...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCACAGGCCCCCGGACTGTaGAGAACTGGGGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: VLGSGRCSRWMPRPPDQPQAPGL*RTGDKG
Trigger: ACCTTTGTCCCCAGTTCTGCACAGTCCGGGGGCCTG...TGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp AGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACTCACACTCTGCTGTTaGTCCCAGCTGGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SSSARQWKVFSVDAPATRLTLCC*SQLGPH
Trigger: GTGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAG...TCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCGGCGTCACATCCTGCTaGTCAGTGGGAGGGCGCGTG +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSGVTSC*SVGGRV
Trigger: CACGCGCCCTCCCACTGAGCAGCAGGATGTGACGCC...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCGGTGGCGTCACATCCTaGTGCTCAGTGGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSGGVTS*CSVGGR
Trigger: GCGCCCTCCCACTGAGCAGCAGGATGTGACGCCACC...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGCCAGGAGCGGCTTTCTaGCCAGTGAGCCCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQPGAAF*PVSPRA
Trigger: GGCCCGAGGGCTCACTGGGCAGAAAGCCGCTCCTGG...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCCTGGCCCGCCCTGCCTaGGGTCGCTGCTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSLARPA*GRCCLH
Trigger: GTGAAGGCAGCAGCGACCCCAGGCAGGGCGGGCCAG...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGACCCTGCTGCCACGCCTaGGCCCGGATCTTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERPCCHA*ARILSL
Trigger: GAGAGACAAGATCCGGGCCCAGGCGTGGCAGCAGGG...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGTGGGCTGGGGAGAGCTCGCGCCCCTaGCCGTGGGATGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SRIRADGTVRKRPRRWAGESSRP*PWDALA
Trigger: AGCCAAGGCATCCCACGGCCAGGGGCGCGAGCTCTC...CCCAGCCCACCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCGGTGCTGGGAGACCCTaGAGAGCTCGCGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGHQAVGTARWKPRMKTLGAGRP*RARAPG
Trigger: GCCAGGGGCGCGAGCTCTCCAGGGTCTCCCAGCACC...GAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCACGAAGGAAGCCAGGCTaGGTGTGTTCCCAGACACCT +
Preference number: 4 (lower is better)
Translates to: RVLQRSPRQHEALKPRASRRKPG*VCSQTP
Trigger: AGGTGTCTGGGAACACACCCAGCCTGGCTTCCTTCG...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGTGTATGGTCGCTGGCTaGTCGAAGGAAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLCMVAG*SKEARL
Trigger: CAGCCTGGCTTCCTTCGACCAGCCAGCGACCATACA...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTAGGAGCTCTGGGCATTaGGGTCCCTGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPRSSGH*GPCSSP
Trigger: GGGGCTGCTGCAGGGACCCCAATGCCCAGAGCTCCT...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCCAAAACAGGAGCCCAGTCCGCCGATCATCACTTCCACGTCACCAGCTGCCAGGGCTCCCAGGCCTCTaGGAGGAGGGGCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: AQNRSPVRRSSLPRHQLPGLPGL*EEGPCL
Trigger: AAGACAGGGCCCCTCCTCCCAGAGGCCTGGGAGCCC...TGGCAGCTGGTGACGTGGAAGTGATGATCGGCGGACTGGGCTCCTGTTTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAGAGGGAAGCTCCCGGTaGGCCTTGGCAGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWEREGSSR*ALAGHA
Trigger: AGCATGCCCTGCCAAGGCCCACCGGGAGCTTCCCTC...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGGTGCTCAGCCTCCTTTaGGTCCAGGTAGATGCACAT +
Preference number: 4 (lower is better)
Translates to: PGGSYSAAHASTRPSSPGVLSLL*VQVDAH
Trigger: ATGTGCATCTACCTGGACCCAAAGGAGGCTGAGCAC...CCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CGTCTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCCACGTGTCCCTCCTCTaGAAAACCTTGGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RLLQSQGAPDRVQRGWARHVSLL*KTLEKR
Trigger: CCTCTTCTCCAAGGTTTTCCAGAGGAGGGACACGTG...GCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCCTGCAGCCTTTTGTCTaGTTTCACGTCCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: APGFTPWSAGSTGRGTQALQPFV*FHVHVS
Trigger: GGACACGTGGACGTGAAACCAGACAAAAGGCTGCAG...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCCTGCAGCTCGTGCGCTaGGACGACGTCCGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSLQLVR*DDVRGP
Trigger: GGGCCCACGGACGTCGTCCCAGCGCACGAGCTGCAG...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCTCCACCAGCGGGCCCTaGGGGTCGTGTGTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVSTSGP*GSCVSS
Trigger: CGAGGACACACACGACCCCCAGGGCCCGCTGGTGGA...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTAGAAGGGGACTGCCCTaGTGCAGGATTGGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSRRGLP*CRIGGA
Trigger: GGCGCCCCCAATCCTGCACCAGGGCAGTCCCCTTCT...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTCCCAGGAGCACTGCCTaGCCGAGGCTCACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSPRSTA*PRLTLV
Trigger: AACCAGGGTGAGCCTCGGCCAGGCAGTGCTCCTGGG...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGATCCCCGAGGCTGGCTTaGCCCCGGTACAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERSPRLA*PRYRVL
Trigger: CAGAACCCTGTACCGGGGCCAAGCCAGCCTCGGGGA...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCACGAGAGGCGGCCCGATaGCACCGAGCTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPREAAR*HRAVPI
Trigger: GATGGGGACAGCTCGGTGTCATCGGGCCGCCTCTCG...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCAGCACTTGGCAGCTATaGCTTTCTCGCTGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSSTWQL*LSRCLL
Trigger: TAGGAGACAGCGAGAAAGTCATAGCTGCCAAGTGCT...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCGGCTGGGCCCGCATATaGGCTCCCCGCAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFGWARI*APRRGA
Trigger: AGCCCCTCTGCGGGGAGCTCATATGCGGGCCCAGCC...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTGTCGGCTGCGTTCCCTaGAGCTCCCCACATGGCTGT +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPVGCVP*SSPHGC
Trigger: ACAGCCATGTGGGGAGCTTCAGGGAACGCAGCCGAC...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCGCCACGCCAGCTTTGTaGTGCCTCCCACCAGACTGC +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPATPAL*CLPPDC
Trigger: GCAGTCTGGTGGGAGGCATCACAAAGCTGGCGTGGC...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGGCCTGGGGTCGCTGCTaGCTTCACATGGCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQAWGRC*LHMAAS
Trigger: CGAAGCCGCCATGTGAAGGCAGCAGCGACCCCAGGC...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGGGCAGGTGGGCGGCGTaGCCACGACCAGGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRGRWAA*PRPGSA
Trigger: TGCCGACCCTGGTCGTGGGCACGCCGCCCACCTGCC...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGGACGCACAGCTCCCCTaGTGCCACGCCTGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRDAQLP*CHAWAR
Trigger: CCGGGCCCAGGCGTGGCAGCAGGGGAGCTGTGCGTC...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGTTGGAGGGGGCTGAGGTaGCCAGGGACGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GHQAVGTARWKPRMKTLSWRGLR*PGTHSS
Trigger: GGAGCTGTGCGTCCCTGGGCACCTCAGCCCCCTCCA...ACTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCAGATGGCCCGAGCTCTTaGCCTCCCTTGCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPDGPSS*PPLRAW
Trigger: CCAGGCCCGCAAGGGAGGGCAAGAGCTCGGGCCATC...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTGGGCATTGGGGTCCCTaGAGCAGCCCCTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PWAPGSGHCSLETPDENTGHWGP*SSPSLP
Trigger: TGGCAGGGAGGGGCTGCTGCAGGGACCCCAATGCCC...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGCGGACAGGACTCCCGTaGAGTGGAGGAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQRTGLP*SGGAPG
Trigger: CCCTGGAGCTCCTCCACTGCACGGGAGTCCTGTCCG...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGCGATGCCTCTGCCCTTaGCCTGGGGGCCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GCHEISTWVSSTEGPSLQRCLCP*PGGRPS
Trigger: AGAGGGCCGGCCCCCAGGGCAAGGGCAGAGGCATCG...CTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCAGGCCTTGGCAGGGCATaGTTGGCAGCCGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPGLGRA*LAAETG
Trigger: CCCCGTCTCGGCTGCCAAGCATGCCCTGCCAAGGCC...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTAACACAGGCAGAAGCTaGCTGGGGCTTCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSNTGRS*LGLPGP
Trigger: GGGGCCAGGAAGCCCCAGGCAGCTTCTGCCTGTGTT...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCTTGGGTCCAGGTAGATaGACATCCCCCGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: GPSSSARQWKVFSVDAPALGPGR*TSPGVG
Trigger: ACCTACCCCGGGGGATGTGCATCTACCTGGACCCAA...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCAGCGCTTCGGCACCCTaGAGCTTGGCGGTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPSASAP*SLAVRL
Trigger: TAGCCTCACCGCCAAGCTGCAGGGTGCCGAAGCGCT...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCCTCACACTCTGCTGTTaGTCCCAGCTGGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPLTLCC*SQLGPH
Trigger: GTGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAG...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGGGGCGCCACAGAATCTaGCCCTCCGACCGACGGCGT +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQGRHRI*PSDRRR
Trigger: ACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCC...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTGGTGTTCTCGGTGGATaGCCCGGCCACCCGACCAGC +
Preference number: 4 (lower is better)
Translates to: PWAPGSGHCSLETPDENTGVLGG*PGHPTS
Trigger: GCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACC...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCTCCCCAGGAGGAGCCTaGAGGGTCACCGGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFSPGGA*RVTGVS
Trigger: CGAGACCCCGGTGACCCTGCAGGCTCCTCCTGGGGA...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCCTCAGCTACTGGAGGTaGCAGCCTGCCTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVLSYWR*QPAWVP
Trigger: GGGGACCCAGGCAGGCTGGCACCTCCAGTAGCTGAG...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACCCCTCACACGACGAGTaGCCTGGCCAGCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHPSHDE*PGQLTG
Trigger: ACCTGTCAGCTGGCCAGGGCACTCGTCGTGTGAGGG...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCCCCGGCCGTGCGGGCTaGGCAGAAATGACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPPGRAG*AEMTLG
Trigger: GCCCAAGGTCATTTCTGCGCAGCCCGCACGGCCGGG...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCACCTGCGCCGGTCCCCTaGCCCACGATGGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPPAPVP*PTMETL
Trigger: GAGGGTTTCCATCGTGGGCCAGGGGACCGGCGCAGG...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGGCTGGCCACTGCCTaGCTCCGGATGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQGLATA*LRMPAC
Trigger: GCAGGCGGGCATCCGGAGCCAGGCAGTGGCCAGCCC...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGCTGGCCCGCCCTGCCTaGGGTCGCTGCTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GCHEISTWVSSTEGPSLQLARPA*GRCCLH
Trigger: GTGAAGGCAGCAGCGACCCCAGGCAGGGCGGGCCAG...CTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGGTGCAAGGTCAACCTaGCCCGCCCTGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: YPVGPSSSARQWKVFSVDGARST*PALPGV
Trigger: GACCCCAGGCAGGGCGGGCCAGGTTGACCTTGCACC...ATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCGGTGCAAGGTCAACCTaGCCCGCCCTGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFGARST*PALPGV
Trigger: GACCCCAGGCAGGGCGGGCCAGGTTGACCTTGCACC...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCAGACCCGACCACGTaGGGAGCTGCCCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPSDPTT*GAAQGG
Trigger: CCCACCCTGGGCAGCTCCCCACGTGGTCGGGTCTGA...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGTCAGACCCGACCACGTaGGGAGCTGCCCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQSDPTT*GAAQGG
Trigger: CCCACCCTGGGCAGCTCCCCACGTGGTCGGGTCTGA...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCGGAGTCTGGAGGCGCTaGAGGGGGCTGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSGVWRR*RGLRCP
Trigger: TGGGCACCTCAGCCCCCTCCAGCGCCTCCAGACTCC...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATACTTGTAGGATGGCCATaGCCGTCTGTATGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARILVGWP*PSVWSL
Trigger: CAGCGACCATACAGACGGCCATGGCCATCCTACAAG...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACTGGCCCAACCTCTCATaGGGACTCTCCGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHWPNLS*GLSGLW
Trigger: CCAGAGGCCGGAGAGTCCCCATGAGAGGTTGGGCCA...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTAGTCCAGGCCCTCCGTaGACAGGGCTGTGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSSPGPP*TGLCGY
Trigger: GTAGCCACACAGCCCTGTCCACGGAGGGCCTGGACT...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGTGAGGGTTCCGCAGTCTaGGGCCAGGGTCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GHQAVGTARWKPRMKTLSEGSAV*GQGPPR
Trigger: CCTGGGAGGACCCTGGCCCCAGACTGCGGAACCCTC...ACTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GCCCAAAACAGGAGCCCAGTCCGCCGATCATCACTTCCACGTCACCAGCTGCCATTGGCAGGGCATGCTTaGCAGCCGAGACGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: AQNRSPVRRSSLPRHQLPLAGHA*QPRRGS
Trigger: GCTCCCCCGTCTCGGCTGCCAAGCATGCCCTGCCAA...TGGCAGCTGGTGACGTGGAAGTGATGATCGGCGGACTGGGCTCCTGTTTTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGCAGGGCAGGCTGGGGTaGCAAGCGTGGGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GCHEISTWVSSTEGPSLQQGRLG*QAWGWR
Trigger: TCGCCACCCCCACGCTTGCCACCCCAGCCTGCCCTG...CTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GCCCAAAACAGGAGCCCAGTCCGCCGATCATCACTTCCACGTCACCAGCTGCCATTGGCCAGGGGAAGCTaGGAGAGGGCTCCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: AQNRSPVRRSSLPRHQLPLARGS*ERAPSG
Trigger: CCCTGACGGAGCCCTCTCCCAGCTTCCCCTGGCCAA...TGGCAGCTGGTGACGTGGAAGTGATGATCGGCGGACTGGGCTCCTGTTTTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCCCACAGGCCCCGGCATaGAGACGACGTCCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPPQAPA*RRRPSD
Trigger: ATCAGAGGGACGTCGTCTCCATGCCGGGGCCTGTGG...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCCTGGGACGACGTCCGTaGGCCCCGGGATGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRLGRRP*APGWGG
Trigger: TCCTCCCCATCCCGGGGCCCACGGACGTCGTCCCAG...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCCAGTGGGAGGGCGCGTaGCCTTTGAGCTTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSQWEGA*PLSLRG
Trigger: GCCCCGCAAGCTCAAAGGCCACGCGCCCTCCCACTG...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCCACATGGCTGTCTGTTaGAGCCCGGGGCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSHMAVC*SPGLPC
Trigger: GCAGGGAAGCCCCGGGCTCCAACAGACAGCCATGTG...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCGACGGAAGAGCCACCTaGGGCTCCATGCCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPDGRAT*GSMPLL
Trigger: CAGAAGCGGCATGGAGCCCCAGGTGGCTCTTCCGTC...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCGGGCCTCCCTGTGGATaGAGGACGGGAGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPGPPCG*RTGGRH
Trigger: GTGCCGACCTCCCGTCCTCCATCCACAGGGAGGCCC...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCCCTGGTGGGGGTCTTaGCCAAGCAGGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFPWWGS*PSRLGC
Trigger: GCAGCCGAGCCTGCTTGGCCAAGACCCCCACCAGGG...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCGCGGCCAAGGGCACTTaGCCTGGGAGAGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSAAKGT*PGREAA
Trigger: GGCAGCCTCTCTCCCAGGCCAAGTGCCCTTGGCCGC...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCCTGCAGCCCCACCTATaGCCCTGCCCGGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFLQPHL*PCPGWA
Trigger: AGCCCATCCCGGGCAGGGTCATAGGTGGGGCTGCAG...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAGCATGGCCGCGGGGCTaGGGGGAGAGCAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSAWPRG*GESRCK
Trigger: CTTGCACCTGCTCTCCCCTCAGCCCCGCGGCCATGC...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGCACTTGGCAGCTATaGCTTTCTCGCTGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPSTWQL*LSRCLL
Trigger: TAGGAGACAGCGAGAAAGTCATAGCTGCCAAGTGCT...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp TGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGCTGCAGCCTCCGCTTTaGTGGCCCGAGCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: WAPGSGHCSLETPDENTQLQPPL*WPELLP
Trigger: GGGCAAGAGCTCGGGCCATCAAAGCGGAGGCTGCAG...CTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCTTCCCAAGTGGGTTCTaGGGGAAGCTCCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVFPSGF*GKLPVG
Trigger: GCCCACCGGGAGCTTCCCTCAGAACCCACTTGGGAA...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCGGCTTCTCCTGTGTCTaGCACCCCCATCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSGFSCV*HPHQAL
Trigger: GAGAGCCTGATGGGGGTGTCAGACACAGGAGAAGCC...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATAGCCTTCCAGTCGGCTaGTCTCCCTGGGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: YPVGPSSSARQWKVFSVDSLPVG*SPWGPM
Trigger: CATGGGGCCCCAGGGAGAGCAGCCGACTGGAAGGCT...ATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCGGGCCACCTCAGGGCTaGCACGTCATCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGHQAVGTARWKPRMKTLGPPQG*HVILSC
Trigger: GCAGCTGAGGATGACGTGGCAGCCCTGAGGTGGCCC...GAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGTGTGGGCTCTTGCCCTCCCTTaGGGGCCTGGGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HEISTWVSSTEGPSLQVWALALP*GPGPAP
Trigger: TGGAGCTGGCCCAGGCCCGCAAGGGAGGGCAAGAGC...CCACACCTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCCTCTCTAAAGAGGAATaGTTCCTCTCTGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGLSKEE*FLSVMA
Trigger: GGCCATGACAGAGAGGAAGCATTCCTCTTTAGAGAG...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCGGCCTTGGCAGGGCATaGTTGGCAGCCGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFGLGRA*LAAETG
Trigger: CCCCGTCTCGGCTGCCAAGCATGCCCTGCCAAGGCC...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAGGACAAAGGTCACGATaGCAGGGGTGGTCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERGQRSR*QGWSGR
Trigger: TCTCCCGGACCACCCCTGGCATCGTGACCTTTGTCC...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTCAGGCCCCCGGACTGTaGAGAACTGGGGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSQAPGL*RTGDKG
Trigger: ACCTTTGTCCCCAGTTCTGCACAGTCCGGGGGCCTG...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GAAAACCTTGGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACAGCGCTTCGGCACCCTaGAGCTTGGCGGTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: ENLGEEGTWLHSLVSREHSASAP*SLAVRL
Trigger: TAGCCTCACCGCCAAGCTGCAGGGTGCCGAAGCGCT...GTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAAGGTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTTCGGCTCTCGGTCCTTaGACATCGGAGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPSALGP*TSEAAP
Trigger: TGGAGCAGCCTCCGATGTGCAAGGACCGAGAGCCGA...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCTGTGTCCTCGCCCCATaGTGGCCTCGGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPCVLAP*WPRRLL
Trigger: CAGCAGCCTCCGAGGCCAGCATGGGGCGAGGACACA...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGCACAAGGACCTTCTCTaGCGCAGGAGCGTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQHKDLL*RRSVGC
Trigger: GCAGCCGACGCTCCTGCGGCAGAGAAGGTCCTTGTG...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTACGGGAGGTCGGCACTaGCGTAGGACAGCAACTCGT +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPTGGRH*RRTATR
Trigger: ACGAGTTGCTGTCCTACGGCAGTGCCGACCTCCCGT...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCGTTCAGGCCACTGGCTaGCTCCGGCCTCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSVQATG*LRPHPL
Trigger: CAGGGGATGAGGCCGGAGGCAGCCAGTGGCCTGAAC...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCGCCCTCCAGGGGCACTaGCTGACCCCTCACACGACG +
Preference number: 4 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRALQGH*LTPHTT
Trigger: CGTCGTGTGAGGGGTCAGGCAGTGCCCCTGGAGGGC...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTCCAAGCAGGCTCGGCTaGCCAGGGACCCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCPSRLG*PGTLPQ
Trigger: CTGCGGCAGGGTCCCTGGGCAGCCGAGCCTGCTTGG...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCAGAGGCTGCCGGGGCTaGCAACCAGGGACATGGAGG +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFRGCRG*QPGTWR
Trigger: CCTCCATGTCCCTGGTTGGCAGCCCCGGCAGCCTCT...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACGCGAAGAAGCAGGTGTaGAGTCCGGGCCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHAKKQV*SPGLAS
Trigger: TGAAGCCAGGCCCGGACTGCACACCTGCTTCTTCGC...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGGCGACGCGAGGCACCTaGTGGGCTCCCAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQATRGT*WAPRES
Trigger: ACTTTCCCTGGGAGCCCAGCAGGTGCCTCGCGTCGC...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCATGGAAACCCTCAGGTaGGTCATTGAAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPMETLR*VIETGL
Trigger: CAGCCCAGTTTCAATGACCCACCTGAGGGTTTCCAT...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTTCCCCTGGCCCACGATaGAAACCCTCAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSSPGPR*KPSGGS
Trigger: TGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGGA...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCAGACCCGACCACGTaGGGAGCTGCCCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFSDPTT*GAAQGG
Trigger: CCCACCCTGGGCAGCTCCCCACGTGGTCGGGTCTGA...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CGCCTCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAAGGAGTCTGGAGGCGCTaGAGGGGGCTGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RLSAAFCLVSRPRVPPLEGVWRR*RGLRCP
Trigger: TGGGCACCTCAGCCCCCTCCAGCGCCTCCAGACTCC...TTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCGAGGGATCCTTGCTATaGTGCCTGCGGAGGACGGGA +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPEGSLL*CLRRTG
Trigger: TCCCGTCCTCCGCAGGCACCATAGCAAGGATCCCTC...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTGTGGCATCGGGCAACTaGGCACAAACCGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSVASGN*AQTGEH
Trigger: GTGCTCACCGGTTTGTGCCCAGTTGCCCGATGCCAC...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCCACTGTAGGCGGAGGTaGCATCGGGCAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVHCRRR*HRATGH
Trigger: GTGCCCAGTTGCCCGATGCCACCTCCGCCTACAGTG...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCCGAAGGAAGCCAGGCTaGGTGTGTTCCCAGACACCT +
Preference number: 4 (lower is better)
Translates to: QARVLGSGRCSRWMPRPPRRKPG*VCSQTP
Trigger: AGGTGTCTGGGAACACACCCAGCCTGGCTTCCTTCG...GGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCCCAGCCTGGATTTGCTaGCGCAGGTCTTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: GPSSSARQWKVFSVDAPAPAWIC*RRSCRM
Trigger: CATCCTACAAGACCTGCGCCAGCAAATCCAGGCTGG...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp TACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATAGGAGCTCTGGGCATTaGGGTCCCTGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: YPVGPSSSARQWKVFSVDRSSGH*GPCSSP
Trigger: GGGGCTGCTGCAGGGACCCCAATGCCCAGAGCTCCT...ATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTAGGAGCTCTGGGCATTaGGGTCCCTGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PWAPGSGHCSLETPDENTRSSGH*GPCSSP
Trigger: GGGGCTGCTGCAGGGACCCCAATGCCCAGAGCTCCT...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCGGCCTCTGGGAGAAGTaGCCCAACCTCTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSGLWEK*PNLSWG
Trigger: TCCCCATGAGAGGTTGGGCCACTTCTCCCAGAGGCC...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATTGGCAGGGCATGCTTaGCAGCCGAGACGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPLAGHA*QPRRGS
Trigger: GCTCCCCCGTCTCGGCTGCCAAGCATGCCCTGCCAA...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCAGAGGGAAGCTCCCGGTaGGCCTTGGCAGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPEGSSR*ALAGHA
Trigger: AGCATGCCCTGCCAAGGCCCACCGGGAGCTTCCCTC...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGTCTAGGGTCTCAGCATaGTTCCAGGCTCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: PGGSYSAAHASTRPSSPGSRVSA*FQALFK
Trigger: TTTGAACAGAGCCTGGAACCATGCTGAGACCCTAGA...CCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGGGCTTGCTCTCGCAGTaGGCCCTCGGGCTCACACTC +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQGLLSQ*ALGLTL
Trigger: GAGTGTGAGCCCGAGGGCCCACTGCGAGAGCAAGCC...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCTGCAGCCTTTTGTCTaGTTTCACGTCCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLLQPFV*FHVHVS
Trigger: GGACACGTGGACGTGAAACCAGACAAAAGGCTGCAG...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTTCCTCTGGCCTGGCCTaGGTCGAGTGTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSSSGLA*VECLSI
Trigger: GATGGAGAGACACTCGACCCAGGCCAGGCCAGAGGA...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCGAGGCGGGTGTGACCTaGGTGTGGCCATCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFEAGVT*VWPSLC
Trigger: GCACAGGGATGGCCACACCCAGGTCACACCCGCCTC...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTGCGAGCGTTTTCTCCTaGAGCGCCATCTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSASVFS*SAISRR
Trigger: CCTGCGAGAGATGGCGCTCCAGGAGAAAACGCTCGC...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGCCGTGGGCCCCGGGATaGGGAGGATGTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQPWAPG*GGCPQA
Trigger: GGCCTGTGGACATCCTCCCCATCCCGGGGCCCACGG...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCCTGAAGCTCCCCACATaGCTGTCTGTTGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPLKLPT*LSVGAR
Trigger: CCGGGCTCCAACAGACAGCCATGTGGGGAGCTTCAG...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTCCTCAGCCACCTGGCTaGCTTCTTGTGGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSPQPPG*LLVGHK
Trigger: CTTGTGGCCCACAAGAAGCCAGCCAGGTGGCTGAGG...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCAGCAGACTCAGAGCCTaGACCGCAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSSRLRA*TAGGGG
Trigger: ACCACCTCCTCCTGCGGTCCAGGCTCTGAGTCTGCT...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCGGCCGAGGCTCACCCTaGTTTGACCGCCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPGRGSP*FDRQDK
Trigger: TTTGTCCTGGCGGTCAAACCAGGGTGAGCCTCGGCC...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACCGGGGTCTCGGGCTCTaGCATGAGGTACGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHRGLGL*HEVREF
Trigger: AAACTCCCGTACCTCATGCCAGAGCCCGAGACCCCG...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTCCATCACTCTGTGCTTaGGGAGTGGGAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPPSLCA*GVGGGG
Trigger: CCCACCTCCTCCCACTCCCCAAGCACAGAGTGATGG...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCTGTGCAGTCCGGGCCTaGCTTCAGGTGACCGTCCCG +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPCAVRA*LQVTVP
Trigger: CGGGACGGTCACCTGAAGCCAGGCCCGGACTGCACA...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGATGGGCCCTTGAGCCGTaGCTTCCTCTGGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERWALEP*LPLVCA
Trigger: TGCACAGACCAGAGGAAGCCACGGCTCAAGGGCCCA...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCCAGGGCCGCTGTCCTTaGAAGCCCTGGCCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPQGRCP*KPWPGF
Trigger: AAACCCGGGCCAGGGCTTCCAAGGACAGCGGCCCTG...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CAA 72 bp AGGGCCTGGAAGGGGGCCACGCCTCTCTGCAGCCTTTaGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RAWKGATPLCSL*SGFTSTCPSSG
Trigger: TCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCGTGGCCCCCTTCCAGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563590.2
3UTR CAA 72 bp CCCAGTCCACCCAGCTGCACGTCATGTGCCGGCAGTTaGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PSPPSCTSCAGS*GVGGASKVKAG
Trigger: GCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGACGTGCAGCTGGGTGGACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp AGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGTGGGCTGGGAGGGTCCTGGTTCCTTaGGGTCGTCAGACCCGACCA +
Preference number: 4 (lower is better)
Translates to: SRIRADGTVRKRPRRWAGRVLVP*GRQTRP
Trigger: TGGTCGGGTCTGACGACCTCAAGGAACCAGGACCCT...CCCAGCCCACCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp GGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCCTGCACTCAAGATGCTaGAACCTGAGCATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GPSSSARQWKVFSVDAPALHSRC*NLSIQG
Trigger: CCCCTGAATGCTCAGGTTTCAGCATCTTGAGTGCAG...GGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp CTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCCTCCTAAGTCCACGGTaGGAGCCGGGTCTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LGHQAVGTARWKPRMKTLLLSPR*EPGLSR
Trigger: CCTCGAGAGACCCGGCTCTCACCGTGGACTTAGGAG...GAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp AGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGTGGGCTGGGGGGGTCCCCCACTTCTaGGTCCACACTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRIRADGTVRKRPRRWAGGVPHF*VHTQFP
Trigger: TGGGAACTGAGTGTGGACTCAGAAGTGGGGGACCCC...CCCAGCCCACCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTAGGAAAGACCAGCAGTaGGTCCGAGTCACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPRKDQQ*VRVTGR
Trigger: TCTGCCGGTGACTCGGACTCACTGCTGGTCTTTCCT...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTTCTCGGGCTCTGGCATaGGGTACGGGAGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSSRALA*GTGVCS
Trigger: AGAGCAAACTCCCGTACCTCATGCCAGAGCCCGAGA...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTGCTCTTGGCGACTCTaGCTGTTCTTGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSCSWRL*LFLPLG
Trigger: GCCCAGAGGCAAGAACAGTCAGAGTCGCCAAGAGCA...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGTGTGGGCCTGGGGTCGCTGCTaGCTTCACATGGCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: HEISTWVSSTEGPSLQVWAWGRC*LHMAAS
Trigger: CGAAGCCGCCATGTGAAGGCAGCAGCGACCCCAGGC...CCACACCTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCAATCCTCAGCTGCAGGTaGGCAGAGCCTGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPILSCR*AEPGLG
Trigger: GCCAAGCCCAGGCTCTGCGCACCTGCAGCTGAGGAT...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAGACCACGTGGGGAGCTaGCCAGGGTGGGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSDHVGS*PGWVWL
Trigger: CAGCCAGACCCACCCTGGGCAGCTCCCCACGTGGTC...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACATCTTGTCTCTCAGCTaGTCCAGCCGCGCGTCACTC +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHILSLS*SSRASL
Trigger: GAGTGACGCGCGGCTGGAGCAGCTGAGAGACAAGAT...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATAAACTCTGCGCTCAGCTaGACTCAAGATGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARINSALS*TQDAET
Trigger: GGTTTCAGCATCTTGAGTGCAGCTGAGCGCAGAGTT...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTCTCTCGAGGGATCCTTaGTATGGTGCCTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPLSRDP*YGACGG
Trigger: TCCTCCGCAGGCACCATAGCAAGGATCCCTCGAGAG...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCACTCCCTGCCACGTCCTaGAGCCTCCGCTTTGATGGC +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPLPATS*SLRFDG
Trigger: GCCATCAAAGCGGAGGCTGCAGGACGTGGCAGGGAG...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CGCCTCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAACGGACAGGACTCCCGTaGAGTGGAGGAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLSAAFCLVSRPRVPPLERTGLP*SGGAPG
Trigger: CCCTGGAGCTCCTCCACTGCACGGGAGTCCTGTCCG...TTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCTCTGCACGCCGGAGCTaGTCCAGGGCCGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVSARRS*SRAAGL
Trigger: CAGCCCAGCGGCCCTGGAGCAGCTCCGGCGTGCAGA...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GAAAACCTTGGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGACAAAGGTCACGATaGCAGGGGTGGTCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: ENLGEEGTWLHSLVSREHGQRSR*QGWSGR
Trigger: TCTCCCGGACCACCCCTGGCATCGTGACCTTTGTCC...GTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAAGGTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp AGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGATGCCAGAGGTCACTTTaGTCCATTCCAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: SSSARQWKVFSVDAPATRCQRSL*SIPALG
Trigger: CCCCAGTGCTGGAATGGAGCAAAGTGACCTCTGGCA...TCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAACACAGGCAGAAGCTaGCTGGGGCTTCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGHQAVGTARWKPRMKTLNTGRS*LGLPGP
Trigger: GGGGCCAGGAAGCCCCAGGCAGCTTCTGCCTGTGTT...GAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTTTGGGTCCAGGTAGATaGACATCCCCCGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSLGPGR*TSPGVG
Trigger: ACCTACCCCGGGGGATGTGCATCTACCTGGACCCAA...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCACTCACACTCTGCTGTTaGTCCCAGCTGGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPLTLCC*SQLGPH
Trigger: GTGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAG...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCTCGGGCTCACACTCTaGTGTTGCTCCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFLGLTL*CCSQLG
Trigger: CCCCAGCTGGGAGCAACAGCAGAGTGTGAGCCCGAG...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCGAAAACCTCGGGGCTTaGTCTCGCAGTGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LGHQAVGTARWKPRMKTLENLGA*SRSGPS
Trigger: CGAGGGCCCACTGCGAGAGCAAGCCCCGAGGTTTTC...GAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTTTGCACATCGGAGGCTaGTCCAGCTTCAACGCCTCC +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSLHIGG*SSFNAS
Trigger: GGAGGCGTTGAAGCTGGAGCAGCCTCCGATGTGCAA...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCCTGAGGGCTTGCTGCTaGTTCTCAACCAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSLRACC*FSTSAA
Trigger: GGCCGCGCTGGTTGAGAAGCAGCAGCAAGCCCTCAG...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCTGGAGCTGCTGGGCCTaGATGGGGTCAGGGGACACA +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFWSCWA*MGSGDT
Trigger: TGTGTCCCCTGACCCCATGCAGGCCCAGCAGCTCCA...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGACTGCTGGTGACCATCTaGATCGGAGGTTGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERLLVTI*IGGCLG
Trigger: CCCCAGACAACCTCCGATGCAGATGGTCACCAGCAG...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGCTGGAGAGGGGCTCTTaGCTCACGGCAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRLERGS*LTAGGP
Trigger: TGGGCCCCCTGCCGTGAGGCAAGAGCCCCTCTCCAG...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGCCTGCGCCGGTCCCCTaGCCCACGATGGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRPAPVP*PTMETL
Trigger: GAGGGTTTCCATCGTGGGCCAGGGGACCGGCGCAGG...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCGCAGAGCCTGGGCTTaGCAACAGCCTTCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFRRAWA*QQPSSR
Trigger: CCGACTGGAAGGCTGTTGCCAAGCCCAGGCTCTGCG...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATCAGGTGCGCAGAGCCTaGGCTTGGCAACAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: YPVGPSSSARQWKVFSVDQVRRA*AWQQPS
Trigger: GGAAGGCTGTTGCCAAGCCCAGGCTCTGCGCACCTG...ATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATGGGGCCCCAACACCTaGGGTGGCCTCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPWGPNT*GGLSFQ
Trigger: TTGGAAGGAGAGGCCACCCCAGGTGTTGGGGCCCCA...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATTTTCTGGGCCTCTGCTaGGGCCCCAACACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: YPVGPSSSARQWKVFSVDFLGLC*GPNTWG
Trigger: ACCCCAGGTGTTGGGGCCCCAGCAGAGGCCCAGAAA...ATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCCCCTGCTGCCACGCCTaGGCCCGGATCTTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFPCCHA*ARILSL
Trigger: GAGAGACAAGATCCGGGCCCAGGCGTGGCAGCAGGG...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGGCTTTGTGGAGTCTaGAGGCGCTGGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGHQAVGTARWKPRMKTLRLCGV*RRWRGL
Trigger: CAGCCCCCTCCAGCGCCTCCAGACTCCACAAAGCCT...GAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTGAGAGCTCGCGCCCCTaGCCGTGGGATGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCESSRP*PWDALA
Trigger: AGCCAAGGCATCCCACGGCCAGGGGCGCGAGCTCTC...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGACGTCTGTATGGTCGCTaGCTGGTCGAAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERRLYGR*LVEGSQ
Trigger: CTGGCTTCCTTCGACCAGCCAGCGACCATACAGACG...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GAAAACCTTGGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACAGCTCCAGCCCAGCCTaGATTTGCTGGCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ENLGEEGTWLHSLVSREHSSSPA*ICWRRS
Trigger: AGACCTGCGCCAGCAAATCCAGGCTGGGCTGGAGCT...GTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAAGGTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGGTGGACAGGGCTGTGTaGCTACAGCACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQVDRAV*LQHSRA
Trigger: AGCCCTGGAGTGCTGTAGCCACACAGCCCTGTCCAC...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCTCTAGGGTCTCAGCATaGTTCCAGGCTCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: VQGATESAPPTDGVSSSPSRVSA*FQALFK
Trigger: TTTGAACAGAGCCTGGAACCATGCTGAGACCCTAGA...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp TGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGCGGGTGGTCAGGTCCTaGAGCTCCAGGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: WAPGSGHCSLETPDENTQRVVRS*SSRDPR
Trigger: TCTGGGATCCCTGGAGCTCCAGGACCTGACCACCCG...CTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCGGGTGGTCAGGTCCTaGAGCTCCAGGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFRVVRS*SSRDPR
Trigger: TCTGGGATCCCTGGAGCTCCAGGACCTGACCACCCG...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GTGACCTGGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGGCTGTTGCTCCCAGCTaGGGCCCCACGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: VTWHLRALPRQLCDASHQAVAPS*GPTTVS
Trigger: AGACACTGTCGTGGGGCCCCAGCTGGGAGCAACAGC...CTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTGGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGTCGAGTGCTAGGCAGTaGAAGGTGTTCTCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LEKRAPGFTPWSAGSTGRSSARQ*KVFSVD
Trigger: ATCCACCGAGAACACCTTCCACTGCCTAGCACTCGA...CCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGTGGATGCTCTCCACGTaGAAAAGGATTTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: GATESAPPTDGVSSSPREWMLST*KRISLP
Trigger: GGGTAGAGAAATCCTTTTCCACGTGGAGAGCATCCA...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCTTCAACGCCTCCTCTaGCCTGGCCTGGGTCGAGTG +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFLQRLL*PGLGRV
Trigger: CACTCGACCCAGGCCAGGCCAGAGGAGGCGTTGAAG...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCACAGGTTCAGGCCACTaGCTGCCTCCGGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPTGSGH*LPPASS
Trigger: GGATGAGGCCGGAGGCAGCCAGTGGCCTGAACCTGT...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCCGGGCGAGGGGTGTCTaGAGAGGGGCTCTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRRARGV*RGALAS
Trigger: TGAGGCAAGAGCCCCTCTCCAGACACCCCTCGCCCG...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTCAAGATGCTGAAACCTaGGCATTCAGGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPQDAET*AFRGWR
Trigger: CCTCCAGCCCCTGAATGCTCAGGTTTCAGCATCTTG...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CGCCTCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAATTCCCAAGTGGGTTCTaGGGGAAGCTCCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RLSAAFCLVSRPRVPPLEFPSGF*GKLPVG
Trigger: GCCCACCGGGAGCTTCCCTCAGAACCCACTTGGGAA...TTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp CATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGTGTGGTTCCCAAGTGGGTTCTaGGGGAAGCTCCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HEISTWVSSTEGPSLQVWFPSGF*GKLPVG
Trigger: GCCCACCGGGAGCTTCCCTCAGAACCCACTTGGGAA...CCACACCTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp GGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGTTCACTGCAGGTGTGGTaGGCACAGAGCACGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GHQAVGTARWKPRMKTLSSLQVW*AQSTQR
Trigger: CCTCTGCGTGCTCTGTGCTCACCACACCTGCAGTGA...ACTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGGAGACGACGTCCCTCTaGTGCTGCAGAAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQETTSL*CCRSSF
Trigger: GAAGCTGCTTCTGCAGCATCAGAGGGACGTCGTCTC...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAACAAATCCTGGGTGGTaGTGGCGGTGTCCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERTNPGW*WRCPPQ
Trigger: TTGAGGAGGACACCGCCATCACCACCCAGGATTTGT...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGAGTGCCCTGGCCAGCTaGCAGGTTCAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQSALAS*QVQATG
Trigger: GCCAGTGGCCTGAACCTGTCAGCTGGCCAGGGCACT...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCGCAGGCAGATGCCCCTaGCTTCTAAGCAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPAGRCP*LLSRAQ
Trigger: CTGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGC...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCGAGTATGCTCCTCTCTaGAGTGGAGGAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVEYAPL*SGGGLR
Trigger: CCTCAGGCCTCCTCCACTTCAGAGAGGAGCATACTC...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGGGTGAATGGGGACCCTaGCACAGGCCGGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQGEWGP*HRPAIV
Trigger: AACAATGGCCGGCCTGTGTCAGGGTCCCCATTCACC...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGCGCTGGTTCCAGCTGTaGCTGCAGCCGCCACCGCAT +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQRWFQL*LQPPPH
Trigger: ATGCGGTGGCGGCTGCAGTCACAGCTGGAACCAGCG...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGGGCGGCTTCGAGGCCTaGAGCCCCACCTATGACCCT +
Preference number: 4 (lower is better)
Translates to: HGCHEISTWVSSTEGPSLGGFEA*SPTYDP
Trigger: AGGGTCATAGGTGGGGCTGCAGGCCTCGAAGCCGCC...CAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCACCTGCCTGGGGTCGCTaGTGCCTTCACATGGCGGCT +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSPAWGR*CLHMAA
Trigger: AGCCGCCATGTGAAGGCAGCAGCGACCCCAGGCAGG...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGCTCTTTCTGGGCCTCTaGTGGGGCCCCAACACCTGG +
Preference number: 4 (lower is better)
Translates to: GCHEISTWVSSTEGPSLQLFLGL*WGPNTW
Trigger: CCAGGTGTTGGGGCCCCAGCAGAGGCCCAGAAAGAG...CTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATACTCTCTAAAGAGGAATaGTTCCTCTCTGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: LLQSQGAPDRVQRGWARILSKEE*FLSVMA
Trigger: GGCCATGACAGAGAGGAAGCATTCCTCTTTAGAGAG...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCACAGCACTCCAGGGCTaGTGGGGGAAGGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVTALQG*WGKGLR
Trigger: GCGGAGCCCCTTCCCCCAGCAGCCCTGGAGTGCTGT...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGAAGAAAAAGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGTCTGCACGCCGGAGCTaGTCCAGGGCCGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RRKSRIRADGTVRKRPRRSARRS*SRAAGL
Trigger: CAGCCCAGCGGCCCTGGAGCAGCTCCGGCGTGCAGA...CCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACTTTTTCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCGGCCTTGGCAGGGCATaGTTGGCAGCCGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVGLGRA*LAAETG
Trigger: CCCCGTCTCGGCTGCCAAGCATGCCCTGCCAAGGCC...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATTGCTTATGCCGGAGGTaGAGGGAGCTGGAAGTGCCC +
Preference number: 4 (lower is better)
Translates to: YPVGPSSSARQWKVFSVDCLCRR*RELEVP
Trigger: GGGCACTTCCAGCTCCCTGCACCTCCGGCATAAGCA...ATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGTGCTTATGCCGGAGGTaGAGGGAGCTGGAAGTGCCC +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQCLCRR*RELEVP
Trigger: GGGCACTTCCAGCTCCCTGCACCTCCGGCATAAGCA...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCTCTAGCGCCTGCAGCTaGGCCTGCTTATGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRSSACS*ACLCRR
Trigger: CCTCCGGCATAAGCAGGCGCAGCTGCAGGCGCTAGA...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCACCAGGCAGTGGGCACTaGTCGTTGGAAACCCCGGAT +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPPGSGH*SLETPD
Trigger: ATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGG...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGAGCCCATCCAGGGTCTaGTGTGTCTCCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRSPSRV*CVSRAS
Trigger: GGAGGCCCGGGAGACACAGCAGACCCTGGATGGGCT...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCCTGCTGAGGGCTTGCTaGTGCTTCTCAACCAGCGCG +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPLLRAC*CFSTSA
Trigger: CGCGCTGGTTGAGAAGCAGCAGCAAGCCCTCAGCAG...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTCGGTGCCTGAACAGCTaGGTGTGTCTCAGGTATTGG +
Preference number: 4 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSRCLNS*VCLRYW
Trigger: CCAATACCTGAGACACACGCAGCTGTTCAGGCACCG...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCATTGAGCTTGCGGGGCTaGTCTGGGGGCGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSLSLRG*SGGDGW
Trigger: CCAGCCATCGCCCCCAGAGCAGCCCCGCAAGCTCAA...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGCCCTCTTCGCTCATaGTGTCCTCAGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPSPLRS*CPQPPG
Trigger: GCCAGGTGGCTGAGGACAGCATGAGCGAAGAGGGCT...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCCAGGCCTCCGTCCTCTaGTCCCCCGATCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVQASVL*SPDRQL
Trigger: GAGCTGGCGATCGGGGGAGCAGAGGACGGAGGCCTG...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACGATCAGGGTAGCCGCTaGTTTCTGGAACTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHDQGSR*FLELPE
Trigger: CTCTGGGAGTTCCAGAAAGCAGCGGCTACCCTGATC...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCCCCCTGCTGCAGAACTaGATCTACCCAACTGGTCGT +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPPLLQN*IYPTGR
Trigger: ACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGG...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGATGGAGCTGGGGGCTaGACTGATGGCCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQDGAGG*TDGPGS
Trigger: GCTCCCAGGGCCATCAGTGCAGCCCCCAGCTCCATC...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCGCATGCCCAGAGCTCTaGGCTCCTTCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRACPEL*APSQGS
Trigger: AGAGCCCTGGGAAGGAGCGCAGAGCTCTGGGCATGC...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCCCCACCCCGGCTCTCTaGATGCCCAGAGCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVPTPAL*MPRALR
Trigger: GCGCAGAGCTCTGGGCATGCAGAGAGCCGGGGTGGG...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTTCCTGGCATAGGCGCTaGTCCGCCCCGTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCSWHRR*SAPSSF
Trigger: GAACGAGGACGGGGCGGAGCAGCGCCTATGCCAGGA...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGCAGCTGCACGTCATGTaGCGGCAGTTTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQQLHVM*RQFGCG
Trigger: CCCACACCCAAACTGCCGGCACATGACGTGCAGCTG...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCACAGCCGCCACCGCATTaGGCCGCACGTCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSQPPPH*AARQHQ
Trigger: TTGGTGCTGACGTGCGGCGCAATGCGGTGGCGGCTG...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCCCCTGGCCCACGATaGAAACCCTCAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPSPGPR*KPSGGS
Trigger: TGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGGA...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAGGCCTGTGGACCACATaGGCAGGCTGCACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSGLWTT*AGCTPS
Trigger: GGAAGGCGTGCAGCCTGCCCATGTGGTCCACAGGCC...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGGCGCGTCACTCTTTCTaGGCCTCTGCTGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: HGCHEISTWVSSTEGPSLARHSF*ASAGAP
Trigger: TGGGGCCCCAGCAGAGGCCCAGAAAGAGTGACGCGC...CAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CGCCTCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAAAGGCTTTGTGGAGTCTaGAGGCGCTGGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLSAAFCLVSRPRVPPLERLCGV*RRWRGL
Trigger: CAGCCCCCTCCAGCGCCTCCAGACTCCACAAAGCCT...TTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGCGTGGAGGCTTTGTaGAGTCTGGAGGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGHQAVGTARWKPRMKTLSVEAL*SLEALE
Trigger: CTCCAGCGCCTCCAGACTCCACAAAGCCTCCACGCT...GAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCAGCGTGGAGGCTTTGTaGAGTCTGGAGGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFSVEAL*SLEALE
Trigger: CTCCAGCGCCTCCAGACTCCACAAAGCCTCCACGCT...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCACAGGAACCTGGTGCTaGGAGACCCTGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPTGTWC*ETLESS
Trigger: CGAGCTCTCCAGGGTCTCCCAGCACCAGGTTCCTGT...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CGCCTCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAACACTGTAGGCGGAGGTaGCATCGGGCAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RLSAAFCLVSRPRVPPLEHCRRR*HRATGH
Trigger: GTGCCCAGTTGCCCGATGCCACCTCCGCCTACAGTG...TTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp CATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGTGTGGCACTGTAGGCGGAGGTaGCATCGGGCAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: HEISTWVSSTEGPSLQVWHCRRR*HRATGH
Trigger: GTGCCCAGTTGCCCGATGCCACCTCCGCCTACAGTG...CCACACCTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTCCAGCCTGGATTTGCTaGCGCAGGTCTTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPPAWIC*RRSCRM
Trigger: CATCCTACAAGACCTGCGCCAGCAAATCCAGGCTGG...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCAGCTCCAGCCCAGCCTaGATTTGCTGGCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSSSSPA*ICWRRS
Trigger: AGACCTGCGCCAGCAAATCCAGGCTGGGCTGGAGCT...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGCGCTCCAGCATCTGGTaGGTGGGGTTGTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQRSSIW*VGLSGG
Trigger: CCCTCCGGACAACCCCACCCACCAGATGCTGGAGCG...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGCCTGCTGGGGAGGTGTaGGATGACACCGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQPAGEV*DDTVAS
Trigger: AGAAGCCACGGTGTCATCCCACACCTCCCCAGCAGG...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCCTTCAGCTTCCAAGCTaGGAAGAGAGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPLQLPS*EESWSS
Trigger: GGAGCTCCAGCTCTCTTCCCAGCTTGGAAGCTGAAG...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGACCTCCCAAACTTTGCTaGAGGCCTCTGACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERPPKLC*RPLTAL
Trigger: CAGAGCTGTCAGAGGCCTCCAGCAAAGTTTGGGAGG...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCACACGACGAGTGCCCTaGCCAGCTGACAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSTRRVP*PADRFR
Trigger: CCTGAACCTGTCAGCTGGCCAGGGCACTCGTCGTGT...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCCAAAACAGGAGCCCAGTCCGCCGATCATCACTTCCACGTCACCAGCTGCCAACCAAGTCCACTGCCTaGTCTCTCTCCACACCTGGG +
Preference number: 4 (lower is better)
Translates to: AQNRSPVRRSSLPRHQLPTKSTA*SLSTPG
Trigger: CCCAGGTGTGGAGAGAGACCAGGCAGTGGACTTGGT...TGGCAGCTGGTGACGTGGAAGTGATGATCGGCGGACTGGGCTCCTGTTTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTAGAAATCAGCTGCCCTaGCCTTCCAGGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPRNQLP*PSRHSK
Trigger: CTTGCTGTGCCTGGAAGGCCAGGGCAGCTGATTTCT...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTTGTCCTTGGAAGCCCTaGCCCGGGTTTTCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPCPWKP*PGFSFV
Trigger: AACGAAGGAAAACCCGGGCCAGGGCTTCCAAGGACA...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CAA 72 bp GCTGCAACGCCTTTTCTTGGACGCCTCTTCGTGGCTTaGATGCGAAGAAGCAGGTGTGCAGTCCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AATPFLGRLFVA*MRRSRCAVRAW
Trigger: CCAGGCCCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAAAGGCGTTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CGCCTCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAACCTCAGGTGGGTCATTaGAACTGGGCTGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: RLSAAFCLVSRPRVPPLEPQVGH*NWAGTV
Trigger: CACCGTGCCAGCCCAGTTTCAATGACCCACCTGAGG...TTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGACTGCACTCAAGATGCTaGAACCTGAGCATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERLHSRC*NLSIQG
Trigger: CCCCTGAATGCTCAGGTTTCAGCATCTTGAGTGCAG...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCTGGGCACAAACCGGTaGGCACTTGGCAGCTATGAC +
Preference number: 4 (lower is better)
Translates to: PWAPGSGHCSLETPDENTLGTNR*ALGSYD
Trigger: GTCATAGCTGCCAAGTGCTCACCGGTTTGTGCCCAG...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTATGGGTACAGCGGCCTaGGTCTGTCTCCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCMGTAA*VCLQER
Trigger: CCGCTCCTGGAGACAGACTCAGGCCGCTGTACCCAT...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGTGTGCAGCTCAGGTGTaGGACATCCATGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQCAAQV*DIHAQS
Trigger: GGACTGGGCATGGATGTCTCACACCTGAGCTGCACA...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCCCCGGTCAATATATCTaGATGCCAAAGCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSPGQYI*MPKPSA
Trigger: AGCGGAGGGCTTTGGCATTCAGATATATTGACCGGG...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGATCCTCAGCTGCAGGTaGGCAGAGCCTGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRILSCR*AEPGLG
Trigger: GCCAAGCCCAGGCTCTGCGCACCTGCAGCTGAGGAT...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCACTCTCGAGGGATCCTTaGTATGGTGCCTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPLSRDP*YGACGG
Trigger: TCCTCCGCAGGCACCATAGCAAGGATCCCTCGAGAG...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCCGATGCCTCTGCCCTTaGCCTGGGGGCCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYIRCLCP*PGGRPS
Trigger: AGAGGGCCGGCCCCCAGGGCAAGGGCAGAGGCATCG...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGGACAAAGGTCACGATaGCAGGGGTGGTCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GCHEISTWVSSTEGPSLQGQRSR*QGWSGR
Trigger: TCTCCCGGACCACCCCTGGCATCGTGACCTTTGTCC...CTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CGCCTCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAACTGGAAGTGCCCAGGTaGTCAGCCTCCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RLSAAFCLVSRPRVPPLELEVPR*SASFGS
Trigger: GGACCCAAAGGAGGCTGAGCACCTGGGCACTTCCAG...TTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTGGGGCCACGCCTCTCTaGAGCCTTTTGTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PWAPGSGHCSLETPDENTGATPL*SLLSGF
Trigger: GAAACCAGACAAAAGGCTGCAGAGAGGCGTGGCCCC...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAGGCACCCTCGTCGATaGTCCAGCCAGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVRHPRR*SSQASS
Trigger: GGAGCTGGCCTGGCTGGAGCATCGACGAGGGTGCCT...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGGATGGCTGGTGGAGCTaGTGGGCCTGCATGGGGTCA +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRDGWWS*WACMGS
Trigger: TGACCCCATGCAGGCCCAGCAGCTCCACCAGCCATC...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGACTGGATCCAAACATCTaGATTCTCAGGTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERLDPNI*ILRWAG
Trigger: CCCAGCCCACCTGAGAATGCAGATGTTTGGATCCAG...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAAGCCATCAGATTCGCTaGAAATCTGCGGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERSHQIR*KSAGLQ
Trigger: CTGAAGCCCCGCAGATTTGCAGCGAATCTGATGGCT...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTACTGGGCTGGCACGGTaGGCAGCCCGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICITGLAR*AARPWA
Trigger: AGCCCAGGGCCGGGCTGCCCACCGTGCCAGCCCAGT...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCCCCTGGCCCACGATaGAAACCCTCAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFSPGPR*KPSGGS
Trigger: TGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGGA...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp AGAAGAAAAAGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGGGTGCAAGGTCAACCTaGCCCGCCCTGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RRKSRIRADGTVRKRPRRGARST*PALPGV
Trigger: GACCCCAGGCAGGGCGGGCCAGGTTGACCTTGCACC...CCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACTTTTTCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATCTTCCCCCAGGGTCCTaGTTCCTTGAGGTCGTCAGA +
Preference number: 4 (lower is better)
Translates to: YPVGPSSSARQWKVFSVDLPPGS*FLEVVR
Trigger: TCTGACGACCTCAAGGAACCAGGACCCTGGGGGAAG...ATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp AGAAGAAAAAGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGGGAGTCTGGAGGCGCTaGAGGGGGCTGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RRKSRIRADGTVRKRPRRGVWRR*RGLRCP
Trigger: TGGGCACCTCAGCCCCCTCCAGCGCCTCCAGACTCC...CCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACTTTTTCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTAGGCTTTGTGGAGTCTaGAGGCGCTGGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCRLCGV*RRWRGL
Trigger: CAGCCCCCTCCAGCGCCTCCAGACTCCACAAAGCCT...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCAGCGTGGAGGCTTTGTaGAGTCTGGAGGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFSVEAL*SLEALE
Trigger: CTCCAGCGCCTCCAGACTCCACAAAGCCTCCACGCT...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGTGCTGGGAGACCCTaGAGAGCTCGCGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLGAGRP*RARAPG
Trigger: GCCAGGGGCGCGAGCTCTCCAGGGTCTCCCAGCACC...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGTGTGGACAGGAACCTGGTGCTaGGAGACCCTGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: HEISTWVSSTEGPSLQVWTGTWC*ETLESS
Trigger: CGAGCTCTCCAGGGTCTCCCAGCACCAGGTTCCTGT...CCACACCTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAGGACTCTCCGGCCTCTaGAAGGAGCGGTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSGLSGL*KERSCP
Trigger: AGGACAGGACCGCTCCTTCCAGAGGCCGGAGAGTCC...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCCCTCTGCCCTTGCCCTaGGGGCCGGCCCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: GGTLDYHLARSIYLNAKAPLPLP*GPALCT
Trigger: CGTGCAGAGGGCCGGCCCCCAGGGCAAGGGCAGAGG...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCTCACGATGCCAGGGGTaGTCCGGGAGACCACGGGGA +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVSRCQG*SGRPRG
Trigger: TCCCCGTGGTCTCCCGGACCACCCCTGGCATCGTGA...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGGGTAGGTAGCGGGTaGTCAGGTCCTGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQGVGSG*SGPGAP
Trigger: TGGAGCTCCAGGACCTGACCACCCGCTACCTACCCC...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAACAGGGCAGGCTGGGGTaGCAAGCGTGGGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQQGRLG*QAWGWR
Trigger: TCGCCACCCCCACGCTTGCCACCCCAGCCTGCCCTG...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCGGAGAAGAGGGCACCTaGCTTCACTCCCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFGEEGT*LHSLVS
Trigger: GCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCC...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGTTTAATAACGAGGCGTaGATGCTCTCCACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLFNNEA*MLSTWK
Trigger: TTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAA...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCCTGGAGGTCTTCTGTTaGGTGTTGGGAAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSLEVFC*VLGRHL
Trigger: GAGATGCCTTCCCAACACCCAACAGAAGACCTCCAG...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTAACGCCTGCTTCTGCTaGTCCAGCTTCAGAGAATCC +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPNACFC*SSFRES
Trigger: GGATTCTCTGAAGCTGGACCAGCAGAAGCAGGCGTT...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGCTCCGCTCCAGCATCTaGTGGGTGGGGTTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRLRSSI*WVGLSG
Trigger: TCCGGACAACCCCACCCACCAGATGCTGGAGCGGAG...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCAGCTGGGAAGAGAGCTaGAGCTCCCAGAAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVSWEES*SSQKAG
Trigger: TCCAGCTTTCTGGGAGCTCCAGCTCTCTTCCCAGCT...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGGCCTCAGGGGGTGCCTaGAGGGCTTCTCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRASGGA*RASPVS
Trigger: AGACACAGGAGAAGCCCTCCAGGCACCCCCTGAGGC...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTCTTCCTCCAGGACAGTaGGGGCCCCATTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCLPPGQ*GPHSHQ
Trigger: CTGGTGGGAATGGGGCCCCCACTGTCCTGGAGGAAG...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCTCCACACCTGGGAGATaGGTACAGCGGCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFSTPGR*VQRPES
Trigger: AGACTCAGGCCGCTGTACCCATCTCCCAGGTGTGGA...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCTGTGTGGAGAGAGCTGCTAAGGAGTCACGCAGGACCCTCCTGGTGAGCCACGTGTGTCCTGTGACCTaGCATCTTAGGGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: ACVERAAKESRRTLLVSHVCPVT*HLRALP
Trigger: TGGCAAAGCCCTAAGATGCCAGGTCACAGGACACAC...GTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGGGGCTGGGCAGGAGCTaGTGCAAAATCAGATGCATG +
Preference number: 4 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQGLGRS*CKIRCM
Trigger: CATGCATCTGATTTTGCACCAGCTCCTGCCCAGCCC...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAGCGGGGCTTCAGTGGTaGAGATTTATCGTCATGCCA +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERAGLQW*RFIVMP
Trigger: TGGCATGACGATAAATCTCCACCACTGAAGCCCCGC...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCTATCGACCCGCTGCTTaGGGACTTTGGCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LGHQAVGTARWKPRMKTLYRPAA*GLWLWS
Trigger: AGACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATA...GAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTCCCCAGGCTCTTGACTaGCATGGCTGCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCPQALD*HGCHSP
Trigger: TGGAGAGTGGCAGCCATGTCAGTCAAGAGCCTGGGG...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGGCTCCATGCCGCTTCTaGCACCCCCTTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRAPCRF*HPLSGS
Trigger: AGAGCCTGAAAGGGGGTGTCAGAAGCGGCATGGAGC...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCGCCTCTTCGTGGCTTTaGTGCGAAGAAGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSASSWL*CEEAGV
Trigger: CACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGC...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCCACGTCATCCTCAGCTaGAGGTGCGCAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVHVILS*RCAEPG
Trigger: CCCAGGCTCTGCGCACCTGCAGCTGAGGATGACGTG...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGAAGAAAAAGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGACCACATGGGCAGGCTaGACGCCTTCCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RRKSRIRADGTVRKRPRRTTWAG*TPSPRV
Trigger: GACCCTGGGGGAAGGCGTGCAGCCTGCCCATGTGGT...CCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACTTTTTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAATGGAGGGGGCTGAGGTaGCCAGGGACGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQWRGLR*PGTHSS
Trigger: GGAGCTGTGCGTCCCTGGGCACCTCAGCCCCCTCCA...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CGCCTCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAAAGCCCAGCCTGGATTTaGTGGCGCAGGTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: RLSAAFCLVSRPRVPPLESPAWI*WRRSCR
Trigger: CCTACAAGACCTGCGCCAGCAAATCCAGGCTGGGCT...TTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGCTGGAAGTGCCCAGGTaGTCAGCCTCCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQLEVPR*SASFGS
Trigger: GGACCCAAAGGAGGCTGAGCACCTGGGCACTTCCAG...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGAGGCTATCGACCCGCTaGTTGAGGACTTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: WAPGSGHCSLETPDENTQRLSTR*LRTLAV
Trigger: CACAGCCAAAGTCCTCAAGCAGCGGGTCGATAGCCT...CTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGAGGCTATCGACCCGCTaGTTGAGGACTTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQRLSTR*LRTLAV
Trigger: CACAGCCAAAGTCCTCAAGCAGCGGGTCGATAGCCT...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCGGGGCCACGCCTCTCTaGAGCCTTTTGTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRGATPL*SLLSGF
Trigger: GAAACCAGACAAAAGGCTGCAGAGAGGCGTGGCCCC...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGGTGTGGCCATCCCTGTaGTCTGAGAGGCTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRVWPSL*SERLWS
Trigger: CGACCACAGCCTCTCAGAGCACAGGGATGGCCACAC...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGTGGGCCTGCAGCTCGTaGGCTGGGACGACGTCCGTG +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLWACSS*AGTTSV
Trigger: CACGGACGTCGTCCCAGCGCACGAGCTGCAGGCCCA...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGCACCCCCAGGAGCACTaGCTGGCCGAGGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLHPQEH*LAEAHP
Trigger: AGGGTGAGCCTCGGCCAGGCAGTGCTCCTGGGGGTG...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTCATTGTGGACGCCTGTaGACCTCTGTAGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPHCGRL*TSVVPE
Trigger: TTCTGGAACTACAGAGGTGCACAGGCGTCCACAATG...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGCCTCCCACCAGACTaGATGCATAAAGTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPCLPPD*MHKVWS
Trigger: ACTCCAGACTTTATGCATGCAGTCTGGTGGGAGGCA...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAGGCCGTGGGATGCCTTaGCTTCAACTCTGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSGRGMP*LQLCAQ
Trigger: CTGAGCGCAGAGTTGAAGCCAAGGCATCCCACGGCC...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGTGTGGTTGGGCACCAGGCAGTaGGCACTGCTCGTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: HEISTWVSSTEGPSLQVWLGTRQ*ALLVGN
Trigger: GTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAA...CCACACCTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTGGTGTGACCTGGGTGTaGCCATCCCTGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCGVTWV*PSLCSE
Trigger: CTCAGAGCACAGGGATGGCCACACCCAGGTCACACC...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCAAGGAGGACAAATCCTaGGTGGTGATGGCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSKEDKS*VVMAVS
Trigger: GGACACCGCCATCACCACCCAGGATTTGTCCTCCTT...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAAGTTCCCGCCGACCCCTaGGGCCCAGGAAACAGTCCC +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQVPADP*GPGNSP
Trigger: GGGACTGTTTCCTGGGCCCCAGGGGTCGGCGGGAAC...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GTGACCTGGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGCTGCATCTACCCAACTaGTCGTCAACGCTTCCACCC +
Preference number: 4 (lower is better)
Translates to: VTWHLRALPRQLCDASHQLHLPN*SSTLPP
Trigger: GGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAG...CTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTACCCAGACTTTCCACTaGCGGCCAAGGGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCTQTFH*RPRALG
Trigger: GCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGT...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCGTGAGCCCTCGGGCCTaGGTGGGTCCTCTACCTGGC +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYIVSPRA*VGPLPG
Trigger: GCCAGGTAGAGGACCCACCCAGGCCCGAGGGCTCAC...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGTCTCTCTTCCTCTCTTaGCCTTCGCTGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQSLFLS*PSLIPM
Trigger: CATGGGGATCAGCGAAGGCCAAGAGAGGAAGAGAGA...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAACGTGGCAGCGAGCCTaGGAGCCATCAGATTCGCTG +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSTWQRA*EPSDSL
Trigger: CAGCGAATCTGATGGCTCCCAGGCTCGCTGCCACGT...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAGGGTCCTGGTTCCTTaGGGTCGTCAGACCCGACCA +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVRVLVP*GRQTRP
Trigger: TGGTCGGGTCTGACGACCTCAAGGAACCAGGACCCT...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCCAAGATGCTGAAACCTaGGCATTCAGGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFQDAET*AFRGWR
Trigger: CCTCCAGCCCCTGAATGCTCAGGTTTCAGCATCTTG...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp CATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGTGTGGCAAGATGCTGAAACCTaGGCATTCAGGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HEISTWVSSTEGPSLQVWQDAET*AFRGWR
Trigger: CCTCCAGCCCCTGAATGCTCAGGTTTCAGCATCTTG...CCACACCTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCGGCTGGGCCCGCATATaGGCTCCCCGCAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLGWARI*APRRGA
Trigger: AGCCCCTCTGCGGGGAGCTCATATGCGGGCCCAGCC...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAGGCTCACCCTGGTTTaGCCGCCAGGACAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVRLTLV*PPGQRQ
Trigger: CTGCCTTTGTCCTGGCGGTCAAACCAGGGTGAGCCT...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGACACACAGCTCACAATaGCATTGTGGACGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQTHSSQ*HCGRLC
Trigger: GCACAGGCGTCCACAATGTCATTGTGAGCTGTGTGT...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCCGGGCTGCGCAGAAATaGCCTTGGGCCCTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYIRAAQK*PWALEP
Trigger: CGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCG...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCAGGCACAGCAAGTCCTaGGCATGCTCCAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRRHSKS*ACSRRD
Trigger: GTCTCTTCTGGAGCATGCTCAGGACTTGCTGTGCCT...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCGGATGGGCTGGCCACTaGCTGGCTCCGGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLGWAGH*LAPDAR
Trigger: GCGGGCATCCGGAGCCAGGCAGTGGCCAGCCCATCC...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGTGGGCTGGGAACTCTGCGCTCAGCTaGACTCAAGATGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: SRIRADGTVRKRPRRWAGNSALS*TQDAET
Trigger: GGTTTCAGCATCTTGAGTGCAGCTGAGCGCAGAGTT...CCCAGCCCACCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCACCTTGGCTTCAACTCTaGGCTCAGCTGCACTCAAGA +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPPWLQL*AQLHSR
Trigger: TCTTGAGTGCAGCTGAGCGCAGAGTTGAAGCCAAGG...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCCCTTGGCTTCAACTCTaGGCTCAGCTGCACTCAAGA +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPPWLQL*AQLHSR
Trigger: TCTTGAGTGCAGCTGAGCGCAGAGTTGAAGCCAAGG...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TCCACCCTGGGAAAGTCCAGGCCTCTAGGTTCTTACTCCCACGTGTGCATGTGTAGCCCAGCCTGGATTTaGTGGCGCAGGTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: STLGKSRPLGSYSHVCMCSPAWI*WRRSCR
Trigger: CCTACAAGACCTGCGCCAGCAAATCCAGGCTGGGCT...ACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCAGGCTATCGACCCGCTaGTTGAGGACTTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFRLSTR*LRTLAV
Trigger: CACAGCCAAAGTCCTCAAGCAGCGGGTCGATAGCCT...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCGAGCCCCAGATAGGGTaGAGCGTGGCTGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GGTLDYHLARSIYLNAKAEPQIG*SVAGPA
Trigger: TGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTC...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCGCGGCCTGGTGCTGTaGTCGCAGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFRGLVL*SQLLLP
Trigger: CGGGAGGAGGAGCTGCGAGCACAGCACCAGGCCGCG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTAGCTTGGCCTGGGCCTaGAGCTCGTGCGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICISLAWA*SSCAGT
Trigger: CGTCCCAGCGCACGAGCTGCAGGCCCAGGCCAAGCT...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTAGGGGACTGCCCTGGTaGAGGATTGGGGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFRGLPW*RIGGAA
Trigger: GGCGGCGCCCCCAATCCTGCACCAGGGCAGTCCCCT...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGTCCGGCCTCATCCCCTaGTGCAGAACTGCATCTACC +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQSGLIP*CRTAST
Trigger: GGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCGGA...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGTGTGAGACATCCATaGCCAGTCCACCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQGVRHP*PVHPAA
Trigger: TGCAGCTGGGTGGACTGGGCATGGATGTCTCACACC...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCTGGTGCAAAATCAGATaGATGGCCCGAGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSWCKIR*MARAGL
Trigger: AAGCCCAGCTCGGGCCATGCATCTGATTTTGCACCA...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCTCTAAAACCTTTAATAACGAGGCGTGGATGCTCTCCACGTGGAAAAGGATTTGGGCTGGCCACTGCCTaGCTCCGGATGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PLKPLITRRGCSPRGKGFGLATA*LRMPAC
Trigger: GCAGGCGGGCATCCGGAGCCAGGCAGTGGCCAGCCC...AAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp AGAAGAAAAAGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGGCTGCTGCCTTCACATaGCGGCTTCGAGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RRKSRIRADGTVRKRPRRAAAFT*RLRGLQ
Trigger: CTGCAGGCCTCGAAGCCGCCATGTGAAGGCAGCAGC...CCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACTTTTTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCTGTCCCCCAGGCAGGTaGGCGGCGTGCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLCPPGR*AACPRP
Trigger: TGGTCGTGGGCACGCCGCCCACCTGCCTGGGGGACA...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGGCGCGTCACTCTTTCTaGGCCTCTGCTGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PVNISECQSPPLCICPVGARHSF*ASAGAP
Trigger: TGGGGCCCCAGCAGAGGCCCAGAAAGAGTGACGCGC...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGCCAGCCTGGATTTGCTaGCGCAGGTCTTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: GCHEISTWVSSTEGPSLQPAWIC*RRSCRM
Trigger: CATCCTACAAGACCTGCGCCAGCAAATCCAGGCTGG...CTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTGAGGGTTCCGCAGTCTaGGGCCAGGGTCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIEGSAV*GQGPPR
Trigger: CCTGGGAGGACCCTGGCCCCAGACTGCGGAACCCTC...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTTCGAGTGCTAGGCAGTaGAAGGTGTTCTCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: PWAPGSGHCSLETPDENTSSARQ*KVFSVD
Trigger: ATCCACCGAGAACACCTTCCACTGCCTAGCACTCGA...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp CAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCTTTAATAACGAGGCGTaGATGCTCTCCACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: QARVLGSGRCSRWMPRPPFNNEA*MLSTWK
Trigger: TTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAA...GGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCACATGAAATAAGCACGTaGGTCTCATCCACCGAGGGC +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPHEIST*VSSTEG
Trigger: GCCCTCGGTGGATGAGACCCACGTGCTTATTTCATG...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGTGTGGGCACTGCTCGTTaGAAACCCCGGATGAAAACA +
Preference number: 4 (lower is better)
Translates to: GHQAVGTARWKPRMKTLSVGTAR*KPRMKT
Trigger: TGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCAC...ACTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCGACCCTGGGAGGACGTaGCAGCATCTGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVDPGRT*QHLCPE
Trigger: CTCTGGACACAGATGCTGCCACGTCCTCCCAGGGTC...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCCCAGCATCTGGTGGGTaGGGTTGTCCGGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVPASGG*GCPEGR
Trigger: TCTTCCCTCCGGACAACCCCACCCACCAGATGCTGG...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGACGGGAGTTTGCTCTTaGTGGATGGGCTCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRTGVCS*WMGSGQ
Trigger: CTGACCCGAGCCCATCCACCAAGAGCAAACTCCCGT...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCACCCGGACCAGCGAAGGCATCCGAGCATaGGTTGGTGTCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: CCRTASTQLVVNASTRTSEGIRA*VGVFTI
Trigger: GATGGTGAAGACACCAACCCATGCTCGGATGCCTTC...GCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCCAGAGCCCCAACTACTaGGTTCCCGCCGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYIQSPNY*VPADPW
Trigger: CCAGGGGTCGGCGGGAACCCAGTAGTTGGGGCTCTG...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCCTGACAGACCTTCCCTaGCCACAGAGGCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVLTDLP*PQRPLW
Trigger: CCAGAGTGGCCTCTGTGGCCAGGGAAGGTCTGTCAG...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGTCTTGGCCCCTGGTaGGGGTCTTGGCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLGLGPW*GSWPSR
Trigger: CCTGCTTGGCCAAGACCCCCACCAGGGGCCAAGACC...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCTGGAAGGATCAGTGCTaGGACACAGATGTCCCTAAG +
Preference number: 4 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVWKDQC*DTDVPK
Trigger: CTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCA...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCACTCTCACCAGAGCTATaGGGTAGAGGGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSLSPEL*GRGPWQ
Trigger: CTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAG...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGATGCATGGCCCGAGCTaGGCTTCCTGTGCACATGGT +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQMHGPS*ASCAHG
Trigger: ACCATGTGCACAGGAAGCCCAGCTCGGGCCATGCAT...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GTGACCTGGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGGAAGGGGAGGAACCTTaGATTACCATCTTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: VTWHLRALPRQLCDASHQEGEEP*ITILPG
Trigger: ACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTC...CTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CCTCTAAAACCTTTAATAACGAGGCGTGGATGCTCTCCACGTGGAAAAGGATTTGCATGGCCGCGGGGCTaGGGGGAGAGCAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: PLKPLITRRGCSPRGKGFAWPRG*GESRCK
Trigger: CTTGCACCTGCTCTCCCCTCAGCCCCGCGGCCATGC...AAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp GGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGCTGCACTCAAGATGCTaGAACCTGAGCATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GCHEISTWVSSTEGPSLQLHSRC*NLSIQG
Trigger: CCCCTGAATGCTCAGGTTTCAGCATCTTGAGTGCAG...CTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAAGCAGGACCCTCCTGGTaGGCCACGTGGAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQAGPSW*ATWRPS
Trigger: ACTTGGTCTCCACGTGGCTCACCAGGAGGGTCCTGC...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAGCTCAAAGTTTGTTCTaGAATTGGGAGCATGGAGCA +
Preference number: 4 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERAQSLF*NWEHGA
Trigger: TGCTCCATGCTCCCAATTTCAGAACAAACTTTGAGC...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCTACAGCAGGAGACCTTaGAGGGGAGGAACCTTGGAT +
Preference number: 4 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRYSRRP*RGGTLD
Trigger: ATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTA...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCCCTTGGCTTCAACTCTaGGCTCAGCTGCACTCAAGA +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFPWLQL*AQLHSR
Trigger: TCTTGAGTGCAGCTGAGCGCAGAGTTGAAGCCAAGG...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCGATGGCCCGAGCTCTTaGCCTCCCTTGCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLDGPSS*PPLRAW
Trigger: CCAGGCCCGCAAGGGAGGGCAAGAGCTCGGGCCATC...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCCTCCCTGCCACGTCCTaGAGCCTCCGCTTTGATGGC +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYILPATS*SLRFDG
Trigger: GCCATCAAAGCGGAGGCTGCAGGACGTGGCAGGGAG...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCAGACGGGGGAGCCGATaGCTCTGCCCTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSRRGSR*LCPCPG
Trigger: CCCAGGGCAAGGGCAGAGGCATCGGCTCCCCCGTCT...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGAAGAAAAAGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGTGCTTATGCCGGAGGTaGAGGGAGCTGGAAGTGCCC +
Preference number: 4 (lower is better)
Translates to: RRKSRIRADGTVRKRPRRCLCRR*RELEVP
Trigger: GGGCACTTCCAGCTCCCTGCACCTCCGGCATAAGCA...CCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACTTTTTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTATAACGAGGCGTGGATaGTCTCCACGTGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PWAPGSGHCSLETPDENTITRRG*SPRGKG
Trigger: TCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTAT...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR GCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGCCTGCCTTTGGGCTTTaGTCCGGCGCTGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRPAFGL*SGAETS
Trigger: AGAAGTTTCAGCGCCGGAGCAAAGCCCAAAGGCAGG...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCCCCGGCTCTCTGCATaGCCAGAGCTCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIPRLSA*PELCAP
Trigger: AGGAGCGCAGAGCTCTGGGCATGCAGAGAGCCGGGG...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGGGTTCCAGCTGTGACTaGAGCCGCCACCGCATTGCG +
Preference number: 4 (lower is better)
Translates to: PVNISECQSPPLCICPVGGSSCD*SRHRIA
Trigger: CGCAATGCGGTGGCGGCTGCAGTCACAGCTGGAACC...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCAATGGAAACCCTCAGGTaGGTCATTGAAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPMETLR*VIETGL
Trigger: CAGCCCAGTTTCAATGACCCACCTGAGGGTTTCCAT...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGCAGGTGCGCAGAGCCTaGGCTTGGCAACAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLQVRRA*AWQQPS
Trigger: GGAAGGCTGTTGCCAAGCCCAGGCTCTGCGCACCTG...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCGTGCTCAGCCTCCTTTaGGTCCAGGTAGATGCACAT +
Preference number: 4 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFVLSLL*VQVDAH
Trigger: ATGTGCATCTACCTGGACCCAAAGGAGGCTGAGCAC...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGAAGGCATCTCACACATaGGTCCTCCTGCTGACCGCA +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQKASHT*VLLLTA
Trigger: TGCGGTCAGCAGGAGGACCCATGTGTGAGATGCCTT...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAAGGCCACCACATTCTCTaGCCTGTCCTCGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQGHHIL*PVLGTL
Trigger: CAGGGTCCCGAGGACAGGCCAGAGAATGTGGTGGCC...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCCACCTCTGCAGAGGCTaGCTTGGCCACCACATTCTC +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVHLCRG*LGHHIL
Trigger: GAGAATGTGGTGGCCAAGCCAGCCTCTGCAGAGGTG...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCTGCTCTGGGGGCGATaGCTGGTGGAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFLLWGR*LVELLG
Trigger: GCCCAGCAGCTCCACCAGCCATCGCCCCCAGAGCAG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCGTCCTCGCCCCATGCTaGCCTCGGAGGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLVLAPC*PRRLLV
Trigger: CACCAGCAGCCTCCGAGGCCAGCATGGGGCGAGGAC...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGCTGGCTGGCTTCTTGTaGGCCACAAGGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQLAGFL*ATRTFS
Trigger: AGAGAAGGTCCTTGTGGCCCACAAGAAGCCAGCCAG...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGCAGCTCTCGGTTTCCTaGGACTCCTCCACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PVNISECQSPPLCICPVGQLSVS*DSSTGL
Trigger: GAGCCCCGTGGAGGAGTCCCAGGAAACCGAGAGCTG...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGAGTTTGCTCTTGGTaGATGGGCTCGGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQGVCSW*MGSGQH
Trigger: ATGCTGACCCGAGCCCATCCACCAAGAGCAAACTCC...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCTGCAACGCCTTTTCTTaGACGCCTCTTCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFCNAFS*TPLRGF
Trigger: AAAGCCACGAAGAGGCGTCCAAGAAAAGGCGTTGCA...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCGGAGGCCTGAGGCCCTaGACAGGAGAAGCCACATCC +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYIGGLRP*TGEATS
Trigger: GGATGTGGCTTCTCCTGTCCAGGGCCTCAGGCCTCC...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAGCAAAATCAGATGCATaGCCCGAGCTGGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSAKSDA*PELGFL
Trigger: CAGGAAGCCCAGCTCGGGCCATGCATCTGATTTTGC...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCATCTGCATTCTCAGGTaGGCTGGGCAGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVICILR*AGQELV
Trigger: CACCAGCTCCTGCCCAGCCCACCTGAGAATGCAGAT...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCCTGAAATTGGGAGCATaGAGCAGGAACACATTCCCC +
Preference number: 4 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFLKLGA*SRNTFP
Trigger: GGGGAATGTGTTCCTGCTCCATGCTCCCAATTTCAG...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGCCTCAGGTGGGTCATTaGAACTGGGCTGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLPQVGH*NWAGTV
Trigger: CACCGTGCCAGCCCAGTTTCAATGACCCACCTGAGG...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCCTGCAGCCTCCGCTTTaGTGGCCCGAGCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSLQPPL*WPELLP
Trigger: GGGCAAGAGCTCGGGCCATCAAAGCGGAGGCTGCAG...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTGTTGGAAACCCCGGATaGAAACACTCAGTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: PWAPGSGHCSLETPDENTVGNPG*KHSVAE
Trigger: TTCTGCTACTGAGTGTTTTCATCCGGGGTTTCCAAC...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR TCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGTCCTGTCCCGGTGCCTaGACAGCTGCGTGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: PVNISECQSPPLCICPVGSCPGA*TAACVS
Trigger: TGAGACACACGCAGCTGTTCAGGCACCGGGACAGGA...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCCCTCCCAGGCGGCCTTaGCTTTGGGGCTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSPPRRP*LWGWNP
Trigger: AGGGTTCCAGCCCCAAAGTCAAGGCCGCCTGGGAGG...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCGCTTTGCTCCGGCGCTaGAACTTCTGCCATGGCCGT +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYIALLRR*NFCHGR
Trigger: ACGGCCATGGCAGAAGTTTCAGCGCCGGAGCAAAGC...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGATGACCTTGGGCCCTTaGGCCGTGGCTTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PVNISECQSPPLCICPVGMTLGP*AVASSG
Trigger: ACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCAT...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTAGCCTTCCAGTCGGCTaGTCTCCCTGGGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFSLPVG*SPWGPM
Trigger: CATGGGGCCCCAGGGAGAGCAGCCGACTGGAAGGCT...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTGGATCCTTGCTATGGTaGCTGCGGAGGACGGGAGGG +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIGSLLW*LRRTGG
Trigger: CCCTCCCGTCCTCCGCAGGCACCATAGCAAGGATCC...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCCTCTCTAAAGAGGAATaGTTCCTCTCTGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPLSKEE*FLSVMA
Trigger: GGCCATGACAGAGAGGAAGCATTCCTCTTTAGAGAG...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCGTGGTCTCTAGCGCCTaGAGCTGCGCCTGCTTATGC +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYIVVSSA*SCACLC
Trigger: GCATAAGCAGGCGCAGCTGCAGGCGCTAGAGACCAC...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCTCTAAAACCTTTAATAACGAGGCGTGGATGCTCTCCACGTGGAAAAGGATTTGAGCCCCAGATAGGGTaGAGCGTGGCTGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PLKPLITRRGCSPRGKGFEPQIG*SVAGPA
Trigger: TGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTC...AAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp CGCCTCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAAATAACGAGGCGTGGATaGTCTCCACGTGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RLSAAFCLVSRPRVPPLEITRRG*SPRGKG
Trigger: TCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTAT...TTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTGAAAACCTCGGGGCTTaGTCTCGCAGTGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIENLGA*SRSGPS
Trigger: CGAGGGCCCACTGCGAGAGCAAGCCCCGAGGTTTTC...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGAGGAGGGCCAACGCCTaGTTCTGCTGGTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLRRANA*FCWSSF
Trigger: GAAGCTGGACCAGCAGAAGCAGGCGTTGGCCCTCCT...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCTTGGGGCTGGAACCCTaGTGCAGCTTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSLGLEP*CSLAWA
Trigger: GGCCCAGGCCAAGCTGCAGCAGGGTTCCAGCCCCAA...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCTCACCTCCCGAGACCTaGACTGAGCTGTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GGTLDYHLARSIYLNAKASPPET*TELWGG
Trigger: GCCTCCCCACAGCTCAGTGCAGGTCTCGGGAGGTGA...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGTCCTTTGCCGAAATCTaGCCCTTCACTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQSFAEI*PFTQRG
Trigger: ACCTCTTTGAGTGAAGGGGCAGATTTCGGCAAAGGA...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCACACTCCCTAGGGGCTaGACCTGGGGGCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLTLPRG*TWGPVW
Trigger: CCACACAGGCCCCCAGGTGCAGCCCCTAGGGAGTGT...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GTGACCTGGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGTCCCACCAGACTGCATaGATAAAGTCTGGAGTATGC +
Preference number: 4 (lower is better)
Translates to: VTWHLRALPRQLCDASHQSHQTA*IKSGVC
Trigger: GCATACTCCAGACTTTATGCATGCAGTCTGGTGGGA...CTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCAAGGGGCCCTGCCTCTaGCTGTTCTTGTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGTLDYHLARSIYLNAKAKGPCL*LFLWQG
Trigger: GCCCTGCCACAAGAACAGCCAGAGGCAGGGCCCCTT...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCTCTAGGGTCTCAGCATaGTTCCAGGCTCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPSRVSA*FQALFK
Trigger: TTTGAACAGAGCCTGGAACCATGCTGAGACCCTAGA...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATGGATGCTCTCCACGTaGAAAAGGATTTCTCTACCC +
Preference number: 4 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPWMLST*KRISLP
Trigger: GGGTAGAGAAATCCTTTTCCACGTGGAGAGCATCCA...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGCTCTGAGAGGCTGTaGTCGGCTCTCGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYICSERL*SALGPC
Trigger: GCAAGGACCGAGAGCCGACCACAGCCTCTCAGAGCA...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCATCCTGCTGCTCAGTaGGAGGGCGCGTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIHPAAQ*EGAWPL
Trigger: CAAAGGCCACGCGCCCTCCCACTGAGCAGCAGGATG...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCGGTCTGAGGGTCTCCTaGGGGTGGCTCCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: GGTLDYHLARSIYLNAKAGLRVS*GWLLHL
Trigger: GAGGTGAAGGAGCCACCCCCAGGAGACCCTCAGACC...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGTGTGGGATGACACCGTaGCTTCTTCCGAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLCGMTP*LLPKAP
Trigger: GGGGGCCTTCGGAAGAAGCCACGGTGTCATCCCACA...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCCTCCTAAGTCCACGGTaGGAGCCGGGTCTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLLLSPR*EPGLSR
Trigger: CCTCGAGAGACCCGGCTCTCACCGTGGACTTAGGAG...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAAGCACTTGGCAGCTATaGCTTTCTCGCTGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSSTWQL*LSRCLL
Trigger: TAGGAGACAGCGAGAAAGTCATAGCTGCCAAGTGCT...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp CCTCTAAAACCTTTAATAACGAGGCGTGGATGCTCTCCACGTGGAAAAGGATTTCTGCAGCCTCCGCTTTaGTGGCCCGAGCTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PLKPLITRRGCSPRGKGFLQPPL*WPELLP
Trigger: GGGCAAGAGCTCGGGCCATCAAAGCGGAGGCTGCAG...AAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR TCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCAGCTGCCAACAGCCCTaGCAGACCTTCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSSCQQP*QTFPGH
Trigger: GTGGCCAGGGAAGGTCTGTCAGGGCTGTTGGCAGCT...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCTCTTTCTGGGCCTCTaGTGGGGCCCCAACACCTGG +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFLFLGL*WGPNTW
Trigger: CCAGGTGTTGGGGCCCCAGCAGAGGCCCAGAAAGAG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCCCGGCAGAAGAGATTTaGAGCGGGAACACCACACCG +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYIPAEEI*SGNTTP
Trigger: CGGTGTGGTGTTCCCGCTGCAAATCTCTTCTGCCGG...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCAAAGTCTCTCCTCCTTTaGCGAAATCTGCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSKSLLL*RNLPLH
Trigger: GTGAAGGGGCAGATTTCGGCAAAGGAGGAGAGACTT...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGCAGGCTGGGTCCAGCTaGTCCCGGGCGAGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMQAGSS*SRARGV
Trigger: GACACCCCTCGCCCGGGAGCAGCTGGACCCAGCCTG...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCGCTGCTGCCTTCACATaGCGGCTTCGAGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSAAAFT*RLRGLQ
Trigger: CTGCAGGCCTCGAAGCCGCCATGTGAAGGCAGCAGC...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCTGGGGCCCCAACACCTaGGGTGGCCTCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLWGPNT*GGLSFQ
Trigger: TTGGAAGGAGAGGCCACCCCAGGTGTTGGGGCCCCA...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCTTTCTGGGCCTCTGCTaGGGCCCCAACACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLFLGLC*GPNTWG
Trigger: ACCCCAGGTGTTGGGGCCCCAGCAGAGGCCCAGAAA...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAATGTATGGTCGCTGGCTaGTCGAAGGAAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQCMVAG*SKEARL
Trigger: CAGCCTGGCTTCCTTCGACCAGCCAGCGACCATACA...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGAAGAAAAAGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGCTTGTAGGATGGCCATaGCCGTCTGTATGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RRKSRIRADGTVRKRPRRLVGWP*PSVWSL
Trigger: CAGCGACCATACAGACGGCCATGGCCATCCTACAAG...CCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACTTTTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCGAGGCCTCTGGCTGCTaGCTTGTCTCTGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSEASGC*LVSEPP
Trigger: GGGAGGCTCAGAGACAAGCCAGCAGCCAGAGGCCTC...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTGGAGGTTGTCTGGGGTaGCGTCACATCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIGGCLG*RHILLL
Trigger: GAGCAGCAGGATGTGACGCCACCCCAGACAACCTCC...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTGCATCGGAGGTTGTCTaGGGTGGCGTCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIASEVV*GGVTSC
Trigger: GCAGGATGTGACGCCACCCCAGACAACCTCCGATGC...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCTGTCCTCAGCCACCTaGCTGGCTTCTTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICILSSAT*LASCGP
Trigger: TGGCCCACAAGAAGCCAGCCAGGTGGCTGAGGACAG...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCCCGGTACAGGGTTCTaGCAGGTCCTCCTCGCAGTC +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFPGTGF*QVLLAV
Trigger: GACTGCGAGGAGGACCTGCCAGAACCCTGTACCGGG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGCCGGCAGTTTGGGTGTaGGAGGAGCCTCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLPAVWV*EEPPKS
Trigger: TGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGG...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGCCGTGGCTTCCTCTaGTCTGTGCAGCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PVNISECQSPPLCICPVGSRGFL*SVQLRC
Trigger: ACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCT...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGCTCCAGAAGAGACCTTaGGCCACTGATCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLLQKRP*ATDPQR
Trigger: CCTCTGGGGATCAGTGGCCCAAGGTCTCTTCTGGAG...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGTCTGCGGGGCTTCAGTaGTGGAGATTTATCGTCATG +
Preference number: 4 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQSAGLQ*WRFIVM
Trigger: CATGACGATAAATCTCCACCACTGAAGCCCCGCAGA...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGCCACAGCTGGGTCCCTaGCGGTGTCCAGCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMPQLGP*RCPALR
Trigger: CCGAAGCGCTGGACACCGTCAGGGACCCAGCTGTGG...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCCTCGGAGGCTGCTGGTaGCCATCTGCATCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSLGGCW*PSASEV
Trigger: AACCTCCGATGCAGATGGTCACCAGCAGCCTCCGAG...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCGCTCTCCAGGCCAGCTaGAACCTTCGTCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSALQAS*NLRLGS
Trigger: ACTCCCCAGACGAAGGTTTCAGCTGGCCTGGAGAGC...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCGCTCCGTGTGTCCTGTaGCCTGGCATCTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GGTLDYHLARSIYLNAKAAPCVL*PGILGL
Trigger: AAGCCCTAAGATGCCAGGTCACAGGACACACGGAGC...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCTATTGGATTTCCCTCTaGTCCTTCTCCAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRYWISL*SFSNLL
Trigger: CAGCAGATTGGAGAAGGAGCAGAGGGAAATCCAATA...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTAGGGAGGCCTCTGGCTaGTGGCTTGTCTCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFREASG*WLVSEP
Trigger: AGGCTCAGAGACAAGCCAGCAGCCAGAGGCCTCCCT...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGCCTCATCCCCTGCTaGAGAACTGCATCTACCCAA +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLGLIPC*RTASTQ
Trigger: TTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCC...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCCAGGAGAAATCAGCTaGCCTGGCCTTCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIPGEIS*PGLPGT
Trigger: TGTGCCTGGAAGGCCAGGGCAGCTGATTTCTCCTGG...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAAGATTCGCTGCAAATCTaGGGGGCTTCAGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQDSLQI*GASVVE
Trigger: CTCCACCACTGAAGCCCCGCAGATTTGCAGCGAATC...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCTGTTGGGAGATTAAATaGGTTTACACCTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVCWEIK*VYTSAE
Trigger: TTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACA...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCTCTAAAACCTTTAATAACGAGGCGTGGATGCTCTCCACGTGGAAAAGGATTTGCTGCTGCCTTCACATaGCGGCTTCGAGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLKPLITRRGCSPRGKGFAAAFT*RLRGLQ
Trigger: CTGCAGGCCTCGAAGCCGCCATGTGAAGGCAGCAGC...AAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGGTCGGCTGCTCTCCCTaGGGCCCCATGGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMVGCSP*GPMGEG
Trigger: CCCTTCTCCCATGGGGCCCCAGGGAGAGCAGCCGAC...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCTTCCCCCAGGGTCCTaGTTCCTTGAGGTCGTCAGA +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICILPPGS*FLEVVR
Trigger: TCTGACGACCTCAAGGAACCAGGACCCTGGGGGAAG...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGCTTGTAGGATGGCCATaGCCGTCTGTATGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PVNISECQSPPLCICPVGLVGWP*PSVWSL
Trigger: CAGCGACCATACAGACGGCCATGGCCATCCTACAAG...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCTCTAAAACCTTTAATAACGAGGCGTGGATGCTCTCCACGTGGAAAAGGATTTGGGGTAGGTAGCGGGTaGTCAGGTCCTGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLKPLITRRGCSPRGKGFGVGSG*SGPGAP
Trigger: TGGAGCTCCAGGACCTGACCACCCGCTACCTACCCC...AAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGTCTTCTGTTGGGTGTTaGGAAGGCATCTCACACATG +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVRSSVGC*EGISHM
Trigger: CATGTGTGAGATGCCTTCCCAACACCCAACAGAAGA...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCGTAGCCGCTGCTTTCTaGAACTCCCAGAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYIVAAAF*NSQREG
Trigger: TCCCTCTCTCTGGGAGTTCCAGAAAGCAGCGGCTAC...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GCCCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGTACCCAGCATTTCTTTaGGGTCTTGGCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ARSIYLNAKALRSVYVLLYPAFL*GLGPWW
Trigger: CCACCAGGGGCCAAGACCCCAAAGAAATGCTGGGTA...CAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCGTCTCTCTCCACACCTaGGAGATGGGTACAGCGGCC +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSVSLHT*EMGTAA
Trigger: GGCCGCTGTACCCATCTCCCAGGTGTGGAGAGAGAC...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCATGTGCCGGCAGTTTaGGTGTGGGAGGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFHVPAV*VWEEPP
Trigger: TGGAGGCTCCTCCCACACCCAAACTGCCGGCACATG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTTGGGGTAGAGGGCCTTaGCAGCTCCGTGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFWGRGP*QLRVSC
Trigger: ACAGGACACACGGAGCTGCCAAGGCCCTCTACCCCA...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCTGGGCACAAACCGGTaGGCACTTGGCAGCTATGAC +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFLGTNR*ALGSYD
Trigger: GTCATAGCTGCCAAGTGCTCACCGGTTTGTGCCCAG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCCTTCTCCAATCTGCTaGGGGCTTGCTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIPSPIC*GLAAAS
Trigger: AGAAGCAGCAGCAAGCCCTCAGCAGATTGGAGAAGG...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGGTGCTCAGAGTAACCTaGCGGCTCCGGCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMVLRVT*RLRPPP
Trigger: TGGAGGGGGCCGGAGCCGTCAGGTTACTCTGAGCAC...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAAAATCTGCTGAGGGCTTaGTGCTGCTTCTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQNLLRA*CCFSTS
Trigger: GCTGGTTGAGAAGCAGCAGCAAGCCCTCAGCAGATT...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCCTCCTCCCAAACTTTaGTGGAGGCCTCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIPPPKL*WRPLTA
Trigger: AGCTGTCAGAGGCCTCCAGCAAAGTTTGGGAGGAGG...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCACGTCCTCACCAGCATaGTCAAGGGACCCAGACTTT +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYITSSPA*SRDPDF
Trigger: AAAGTCTGGGTCCCTTGAGCATGCTGGTGAGGACGT...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAATCCTGGAAGGATCAGTaGTGGGACACAGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQSWKDQ*WDTDVP
Trigger: AGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGA...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCTCTAAAACCTTTAATAACGAGGCGTGGATGCTCTCCACGTGGAAAAGGATTTGAGGGATCCTTGCTATaGTGCCTGCGGAGGACGGGA +
Preference number: 4 (lower is better)
Translates to: PLKPLITRRGCSPRGKGFEGSLL*CLRRTG
Trigger: TCCCGTCCTCCGCAGGCACCATAGCAAGGATCCCTC...AAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCGAAGGAAGCCAGGCTaGGTGTGTTCCCAGACACCT +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFRRKPG*VCSQTP
Trigger: AGGTGTCTGGGAACACACCCAGCCTGGCTTCCTTCG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCCTGCAGCCTTTTGTCTaGTTTCACGTCCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYILQPFV*FHVHVS
Trigger: GGACACGTGGACGTGAAACCAGACAAAAGGCTGCAG...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGAGGAAGGGCCGGGCTTaGTCTGAGGGTCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMRKGRA*SEGLLG
Trigger: CCCCAGGAGACCCTCAGACCAAGCCCGGCCCTTCCT...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCTGAAACTTCTGCCATaGCCGTGTCCAAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICILKLLP*PCPRRS
Trigger: GCTCCTCCTTGGACACGGCCATGGCAGAAGTTTCAG...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTTTTGCTCTTGGTGGATaGGCTCGGGTCAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFFALGG*ARVSIP
Trigger: CGGGATGCTGACCCGAGCCCATCCACCAAGAGCAAA...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGGAACACATTCCCCACTaGATCCAAACATCTGCATTC +
Preference number: 4 (lower is better)
Translates to: FLGRLFVALMRRSRCAVREHIPH*IQTSAF
Trigger: GAATGCAGATGTTTGGATCCAGTGGGGAATGTGTTC...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTTATCGACCCGCTGCTTaGGGACTTTGGCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFYRPAA*GLWLWS
Trigger: AGACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATA...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR TCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCCGTTTACACCTCTGCTaGAGCGGCTTTTTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: GGTLDYHLARSIYLNAKARLHLC*SGFFSG
Trigger: ACCGGAGAAAAAGCCGCTTCAGCAGAGGTGTAAACG...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCAACTCTGCGCTCAGCTaGACTCAAGATGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYINSALS*TQDAET
Trigger: GGTTTCAGCATCTTGAGTGCAGCTGAGCGCAGAGTT...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCTCTAAAACCTTTAATAACGAGGCGTGGATGCTCTCCACGTGGAAAAGGATTTCTCTCGAGGGATCCTTaGTATGGTGCCTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: PLKPLITRRGCSPRGKGFLSRDP*YGACGG
Trigger: TCCTCCGCAGGCACCATAGCAAGGATCCCTCGAGAG...AAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTTGCCAGAGGTCACTTTaGTCCATTCCAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFCQRSL*SIPALG
Trigger: CCCCAGTGCTGGAATGGAGCAAAGTGACCTCTGGCA...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCTCTAAAACCTTTAATAACGAGGCGTGGATGCTCTCCACGTGGAAAAGGATTTGGGGCCACGCCTCTCTaGAGCCTTTTGTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PLKPLITRRGCSPRGKGFGATPL*SLLSGF
Trigger: GAAACCAGACAAAAGGCTGCAGAGAGGCGTGGCCCC...AAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR GCA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCATAAAGTCTGGAGTATaGTCCTCTCTGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVIKSGV*SSLKWR
Trigger: CCTCCACTTCAGAGAGGAGCATACTCCAGACTTTAT...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTGGCATCTTAGGGCTTTaGCACGCCAGCTTTGTGATG +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIGILGL*HASFVM
Trigger: CATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCC...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTGTGCTCAGCCTCCTTTaGGTCCAGGTAGATGCACAT +
Preference number: 4 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIVLSLL*VQVDAH
Trigger: ATGTGCATCTACCTGGACCCAAAGGAGGCTGAGCAC...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGCATCCGAGCATGGGTTaGTGTCTTCACCATCACTCT +
Preference number: 4 (lower is better)
Translates to: PVNISECQSPPLCICPVGHPSMG*CLHHHS
Trigger: AGAGTGATGGTGAAGACACCAACCCATGCTCGGATG...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAACTCACAATGACATTGTaGACGCCTGTGCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQLTMTL*TPVHLC
Trigger: ACAGAGGTGCACAGGCGTCCACAATGTCATTGTGAG...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCGGAGAAGCCACATCCTaGAAGGATCAGTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSGEATS*KDQCWD
Trigger: GTCCCAGCACTGATCCTTCCAGGATGTGGCTTCTCC...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGTCAGCACCAACCACGTaGCAGCGAGCCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMSAPTT*QRAWEP
Trigger: TGGCTCCCAGGCTCGCTGCCACGTGGTTGGTGCTGA...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGAGGGCTCTCCCCGACTaGCCAAGACCTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMRALPD*PRPPQR
Trigger: CCTTTGAGGAGGTCTTGGGCAGTCGGGGAGAGCCCT...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGTCTTACTCCCACGTGTaGATGTGTATGCCACACACA +
Preference number: 4 (lower is better)
Translates to: PVNISECQSPPLCICPVGSYSHV*MCMPHT
Trigger: TGTGTGTGGCATACACATGCACACGTGGGAGTAAGA...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGCCATGGCCGTCTGTATaGTCGCTGGCTGGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMPWPSV*SLAGRR
Trigger: CCTTCGACCAGCCAGCGACCATACAGACGGCCATGG...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAAGTGTGTCTCAGGTATTaGATTTCCCTCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQVCLRY*ISLCSF
Trigger: GAAGGAGCAGAGGGAAATCCAATACCTGAGACACAC...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCGACTGTTCTTGCCTCTaGGCTGCAACGCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GGTLDYHLARSIYLNAKADCSCL*AATPFL
Trigger: AAGAAAAGGCGTTGCAGCCCAGAGGCAAGAACAGTC...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
3UTR CAA 72 bp TGTGCATGTGTATGCCACACACAGCTCACAATGACATaGTGGACGCCTGTGCACCTCTGTAGTTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: CACVCHTQLTMT*WTPVHLCSSRK
Trigger: TTTTCTGGAACTACAGAGGTGCACAGGCGTCCACAATGTCATTGTGAGCTGTGTGTGGCATACACATGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGAGCTTCCTGTCCCGGTaGCTGAACAGCTGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMSFLSR*LNSCVC
Trigger: ACACACGCAGCTGTTCAGGCACCGGGACAGGAAGCT...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCTAAGGCCAACACGCTaGTCATCAACTCCGCATTCA +
Preference number: 4 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFLRPTR*SSTPHS
Trigger: TGAATGCGGAGTTGATGAGCAGCGTGTTGGCCTTAG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCGGAGATTTATCGTCATaGCAGATGCGTGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GGTLDYHLARSIYLNAKAGDLSS*QMRVCE
Trigger: CTCACACACACGCATCTGGCATGACGATAAATCTCC...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCGTCAATATATCTGAATaGCAAAGCCCTCCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSVNISE*QSPPLC
Trigger: ACAGAGCGGAGGGCTTTGGCATTCAGATATATTGAC...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR GCA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCCTTGGATTACCATCTTaGCCGGTCAATATATCTGAA +
Preference number: 4 (lower is better)
Translates to: GDLEGEEPWITILPGQYILGLPS*PVNISE
Trigger: TTCAGATATATTGACCGGGCAAGATGGTAATCCAAG...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCTGCATGCATAAAGTCTaGAGTATGCTCCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GGTLDYHLARSIYLNAKACMHKV*SMLLSE
Trigger: TTCAGAGAGGAGCATACTCCAGACTTTATGCATGCA...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CCA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAACTGTATATGTCCTGTTaGGAGATTAAATGCGTTTAC +
Preference number: 4 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQLYMSC*EIKCVY
Trigger: GTAAACGCATTTAATCTCCCAACAGGACATATACAG...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 90 bp AGGTGGGCGGCGTGCCCACGACCAGGGTCGGCATGGCCGCGGGGCTaGGGGGAGAGCAGGTGCAAGGTCAACCTGGCCCGCCCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: RWAACPRPGSAWPRG*GESRCKVNLARPAW
Trigger: CCAGGCAGGGCGGGCCAGGTTGACCTTGCACCTGCTCTCCCCTCAGCCCCGCGGCCATGCCGACCCTGGTCGTGGGCACGCCGCCCACCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp TGGGCCTTGGCAGGGCATGCTTGGCAGCCGAGACGGGGGAGCCGATaGCTCTGCCCTTGCCCTGGGGGCCGGCCCTCTGCACGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: WALAGHAWQPRRGSR*LCPCPGGRPSARRS
Trigger: GCTCCGGCGTGCAGAGGGCCGGCCCCCAGGGCAAGGGCAGAGGCATCGGCTCCCCCGTCTCGGCTGCCAAGCATGCCCTGCCAAGGCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp GCTTCGAGGCCTGCAGCCCCACCTATGACCCTGCCCGGGATGGGCTaGCCACTGCCTGGCTCCGGATGCCCGCCTGCGCCGGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ASRPAAPPMTLPGMG*PLPGSGCPPAPVPW
Trigger: CCAGGGGACCGGCGCAGGCGGGCATCCGGAGCCAGGCAGTGGCCAGCCCATCCCGGGCAGGGTCATAGGTGGGGCTGCAGGCCTCGAAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp TGCCTCTGCCCTTGCCCTGGGGGCCGGCCCTCTGCACGCCGGAGCTaGTCCAGGGCCGCTGGGCTGGAGGACTGGGCCTTTCCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: CLCPCPGGRPSARRS*SRAAGLEDWAFPEG
Trigger: ACCCTCTGGAAAGGCCCAGTCCTCCAGCCCAGCGGCCCTGGAGCAGCTCCGGCGTGCAGAGGGCCGGCCCCCAGGGCAAGGGCAGAGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp CCTGCCCGGGATGGGCTGGCCACTGCCTGGCTCCGGATGCCCGCCTaGGCCGGTCCCCTGGCCCACGATGGAAACCCTCAGGTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: PARDGLATAWLRMPA*AGPLAHDGNPQVGH
Trigger: ATGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGGACCGGCGCAGGCGGGCATCCGGAGCCAGGCAGTGGCCAGCCCATCCCGGGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp AGGTCACGATGCCAGGGGTGGTCCGGGAGACCACGGGGACCGCCCTaGCGAGGACGGCCTCCCTCTGCTGCCGGTAGACCTCCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: RSRCQGWSGRPRGPP*RGRPPSAAGRPPAA
Trigger: GGCTGCAGGAGGTCTACCGGCAGCAGAGGGAGGCCGTCCTCGGCAGGGCGGTCCCCGTGGTCTCCCGGACCACCCCTGGCATCGTGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp GGGCCTGCAGCTCGTGCGCTGGGACGACGTCCGTGGGCCCCGGGATaGGGAGGATGTCCACAGGCCCCGGCATGGAGACGACGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: GPAARALGRRPWAPG*GGCPQAPAWRRRPS
Trigger: AGAGGGACGTCGTCTCCATGCCGGGGCCTGTGGACATCCTCCCCATCCCGGGGCCCACGGACGTCGTCCCAGCGCACGAGCTGCAGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp CTCCTGGGGGTGGCTCCTTCACCTCCCGAGACCTGCACTGAGCTGTaGGGAGGCGCCCCTCCGCCTCCTCGGCGGGAAAGGCTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: LLGVAPSPPETCTEL*GGAPPPPRRERLGP
Trigger: TGGGCCCAGCCTTTCCCGCCGAGGAGGCGGAGGGGCGCCTCCCCACAGCTCAGTGCAGGTCTCGGGAGGTGAAGGAGCCACCCCCAGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 90 bp CCCTGCCTGGGGTCGCTGCTGCCTTCACATGGCGGCTTCGAGGCCTaGAGCCCCACCTATGACCCTGCCCGGGATGGGCTGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: PCLGSLLPSHGGFEA*SPTYDPARDGLATA
Trigger: GGCAGTGGCCAGCCCATCCCGGGCAGGGTCATAGGTGGGGCTGCAGGCCTCGAAGCCGCCATGTGAAGGCAGCAGCGACCCCAGGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp GAGGCGCTGGAGGGGGCTGAGGTGCCCAGGGACGCACAGCTCCCCTaGTGCCACGCCTGGGCCCGGATCTTGTCTCTCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: EALEGAEVPRDAQLP*CHAWARILSLSCSS
Trigger: GCTGGAGCAGCTGAGAGACAAGATCCGGGCCCAGGCGTGGCAGCAGGGGAGCTGTGCGTCCCTGGGCACCTCAGCCCCCTCCAGCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp CCTGCTGCTCAGTGGGAGGGCGCGTGGCCTTTGAGCTTGCGGGGCTaGTCTGGGGGCGATGGCTGGTGGAGCTGCTGGGCCTGCATGGGG +
Preference number: 5 (lower is better)
Translates to: PAAQWEGAWPLSLRG*SGGDGWWSCWACMG
Trigger: CCCCATGCAGGCCCAGCAGCTCCACCAGCCATCGCCCCCAGAGCAGCCCCGCAAGCTCAAAGGCCACGCGCCCTCCCACTGAGCAGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp TGCCCGCCTGCGCCGGTCCCCTGGCCCACGATGGAAACCCTCAGGTaGGTCATTGAAACTGGGCTGGCACGGTGGGCAGCCCGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: CPPAPVPWPTMETLR*VIETGLARWAARPW
Trigger: CCAGGGCCGGGCTGCCCACCGTGCCAGCCCAGTTTCAATGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGGACCGGCGCAGGCGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp GGGGCTGAGGTGCCCAGGGACGCACAGCTCCCCTGCTGCCACGCCTaGGCCCGGATCTTGTCTCTCAGCTGCTCCAGCCGCGCGTCACTC +
Preference number: 5 (lower is better)
Translates to: GAEVPRDAQLPCCHA*ARILSLSCSSRASL
Trigger: GAGTGACGCGCGGCTGGAGCAGCTGAGAGACAAGATCCGGGCCCAGGCGTGGCAGCAGGGGAGCTGTGCGTCCCTGGGCACCTCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp GGTGCACACGGCTGGGCTTCCAGGTTAGGAGCACCGGCCTTGGGCTaGACGGGTGGGAGGCTCTGCCTCTGTGCAGCCCCGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GAHGWASRLGAPALG*TGGRLCLCAAPGRL
Trigger: CAGCCTGCCCGGGGCTGCACAGAGGCAGAGCCTCCCACCCGTCCAGCCCAAGGCCGGTGCTCCTAACCTGGAAGCCCAGCCGTGTGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 90 bp GTGGCCTCGACAAGCTGCCCAGGCGTGGCCCCAGGTGCACACGGCTaGGCTTCCAGGTTAGGAGCACCGGCCTTGGGCTGGACGGGTGGG +
Preference number: 5 (lower is better)
Translates to: VASTSCPGVAPGAHG*ASRLGAPALGWTGG
Trigger: CCCACCCGTCCAGCCCAAGGCCGGTGCTCCTAACCTGGAAGCCCAGCCGTGTGCACCTGGGGCCACGCCTGGGCAGCTTGTCGAGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 90 bp GCTGGAACCCTGCTGCAGCTTGGCCTGGGCCTGCAGCTCGTGCGCTaGGACGACGTCCGTGGGCCCCGGGATGGGGAGGATGTCCACAGG +
Preference number: 5 (lower is better)
Translates to: AGTLLQLGLGLQLVR*DDVRGPRDGEDVHR
Trigger: CCTGTGGACATCCTCCCCATCCCGGGGCCCACGGACGTCGTCCCAGCGCACGAGCTGCAGGCCCAGGCCAAGCTGCAGCAGGGTTCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CGTCTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCGACACACCTCGGGGCTaGCTCTCGCAGTGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: RLLQSQGAPDRVQRGWARDTPRG*LSQWAL
Trigger: GAGGGCCCACTGCGAGAGCAAGCCCCGAGGTGTGTC...GCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS TCA 90 bp GCTGCTGCCTTCACATGGCGGCTTCGAGGCCTGCAGCCCCACCTATaGCCCTGCCCGGGATGGGCTGGCCACTGCCTGGCTCCGGATGCC +
Preference number: 5 (lower is better)
Translates to: AAAFTWRLRGLQPHL*PCPGWAGHCLAPDA
Trigger: GGCATCCGGAGCCAGGCAGTGGCCAGCCCATCCCGGGCAGGGTCATAGGTGGGGCTGCAGGCCTCGAAGCCGCCATGTGAAGGCAGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp CAGCTCCCCTGCTGCCACGCCTGGGCCCGGATCTTGTCTCTCAGCTaGTCCAGCCGCGCGTCACTCTTTCTGGGCCTCTGCTGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: QLPCCHAWARILSLS*SSRASLFLGLCWGP
Trigger: GGGGCCCCAGCAGAGGCCCAGAAAGAGTGACGCGCGGCTGGAGCAGCTGAGAGACAAGATCCGGGCCCAGGCGTGGCAGCAGGGGAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp GCCAGCCTGCCTTTGGGCTTTGCTCCGGCGCTGAAACTTCTGCCATaGCCGTGTCCAAGGAGGAGCCACGCAGGGGGCCGGCCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: ASLPLGFAPALKLLP*PCPRRSHAGGRPCG
Trigger: GCCGCAGGGCCGGCCCCCTGCGTGGCTCCTCCTTGGACACGGCCATGGCAGAAGTTTCAGCGCCGGAGCAAAGCCCAAAGGCAGGCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp GGCCCAGTGAGCCACCTGCAGGCAGGGAGCTCCCCGAGGCTGGCTTaGCCCCGGTACAGGGTTCTGGCAGGTCCTCCTCGCAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GPVSHLQAGSSPRLA*PRYRVLAGPPRSPP
Trigger: AGGAGGACTGCGAGGAGGACCTGCCAGAACCCTGTACCGGGGCCAAGCCAGCCTCGGGGAGCTCCCTGCCTGCAGGTGGCTCACTGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCCTTGGCAGGGCATGCTaGGCAGCCGAGACGGGGGAG +
Preference number: 5 (lower is better)
Translates to: GPTAQPTPARGPQAQGFSLGRAC*AAETGE
Trigger: CTCCCCCGTCTCGGCTGCCAAGCATGCCCTGCCAAG...GCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCGCTCACACTCTGCTGTaGCTCCCAGCTGGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSAHTLL*LPAGAP
Trigger: TGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAGC...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS CCA 90 bp GGCTGGCCACTGCCTGGCTCCGGATGCCCGCCTGCGCCGGTCCCCTaGCCCACGATGGAAACCCTCAGGTGGGTCATTGAAACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GWPLPGSGCPPAPVP*PTMETLRWVIETGL
Trigger: CAGCCCAGTTTCAATGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGGACCGGCGCAGGCGGGCATCCGGAGCCAGGCAGTGGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp CCTCGTCGATGCTCCAGCCAGGCCAGCTCCGCGAGCGTTTTCTCCTaGAGCGCCATCTCTCGCAGGCGCAGCAGCGCGGCCTGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: PRRCSSQASSASVFS*SAISRRRSSAAWCC
Trigger: ACAGCACCAGGCCGCGCTGCTGCGCCTGCGAGAGATGGCGCTCCAGGAGAAAACGCTCGCGGAGCTGGCCTGGCTGGAGCATCGACGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCGCCTGGGCCCGGATCTaGTCTCTCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCAWARI*SLSCSS
Trigger: GCTGGAGCAGCTGAGAGACAAGATCCGGGCCCAGGC...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp TTGGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGAGCTCTTGCCCTCCCTaGCGGGCCTGGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LEKRAPGFTPWSAGSTGRSSCPP*RAWASS
Trigger: GGAGCTGGCCCAGGCCCGCAAGGGAGGGCAAGAGCT...CCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCGGAAAACCTCGGGGCTaGCTCTCGCAGTGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCGKPRG*LSQWAL
Trigger: GAGGGCCCACTGCGAGAGCAAGCCCCGAGGTTTTCC...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCAGCTGCTGGGTCCCTaGGGCACCAGGCAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLQLLGP*GTRQWA
Trigger: TGCCCACTGCCTGGTGCCCAAGGGACCCAGCAGCTG...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS TCA 90 bp ACCACATGGGCAGGCTGCACGCCTTCCCCCAGGGTCCTGGTTCCTTaGGGTCGTCAGACCCGACCACGTGGGGAGCTGCCCAGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: TTWAGCTPSPRVLVP*GRQTRPRGELPRVG
Trigger: ACCCACCCTGGGCAGCTCCCCACGTGGTCGGGTCTGACGACCTCAAGGAACCAGGACCCTGGGGGAAGGCGTGCAGCCTGCCCATGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp AGCAGGTGCAAGGTCAACCTGGCCCGCCCTGCCTGGGGTCGCTGCTaGCTTCACATGGCGGCTTCGAGGCCTGCAGCCCCACCTATGACC +
Preference number: 5 (lower is better)
Translates to: SRCKVNLARPAWGRC*LHMAASRPAAPPMT
Trigger: GGTCATAGGTGGGGCTGCAGGCCTCGAAGCCGCCATGTGAAGGCAGCAGCGACCCCAGGCAGGGCGGGCCAGGTTGACCTTGCACCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp GAGAGCAGGTGCAAGGTCAACCTGGCCCGCCCTGCCTGGGGTCGCTaGTGCCTTCACATGGCGGCTTCGAGGCCTGCAGCCCCACCTATG +
Preference number: 5 (lower is better)
Translates to: ESRCKVNLARPAWGR*CLHMAASRPAAPPM
Trigger: CATAGGTGGGGCTGCAGGCCTCGAAGCCGCCATGTGAAGGCAGCAGCGACCCCAGGCAGGGCGGGCCAGGTTGACCTTGCACCTGCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp TCAGCTACTGGAGGTGCCAGCCTGCCTGGGTCCCCAGGAGGAGCCTaGAGGGTCACCGGGGTCTCGGGCTCTGGCATGAGGTACGGGAGT +
Preference number: 5 (lower is better)
Translates to: SATGGASLPGSPGGA*RVTGVSGSGMRYGS
Trigger: ACTCCCGTACCTCATGCCAGAGCCCGAGACCCCGGTGACCCTGCAGGCTCCTCCTGGGGACCCAGGCAGGCTGGCACCTCCAGTAGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp GCCTGTGGACCACATGGGCAGGCTGCACGCCTTCCCCCAGGGTCCTaGTTCCTTGAGGTCGTCAGACCCGACCACGTGGGGAGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: ACGPHGQAARLPPGS*FLEVVRPDHVGSCP
Trigger: TGGGCAGCTCCCCACGTGGTCGGGTCTGACGACCTCAAGGAACCAGGACCCTGGGGGAAGGCGTGCAGCCTGCCCATGTGGTCCACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp TCTCGCAGTGGGCCCTCGGGCTCACACTCTGCTGTTGCTCCCAGCTaGGGCCCCACGACAGTGTCTCGCCGTCCAGGAAGTAGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: SRSGPSGSHSAVAPS*GPTTVSRRPGSRSG
Trigger: CCCCGACCTACTTCCTGGACGGCGAGACACTGTCGTGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAGCCCGAGGGCCCACTGCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp TGGTGGGTGGGGTTGTCCGGAGGGAAGAACTTGGCCAGGGGAAGCTaGGAGAGGGCTCCGTCAGGGCCCTCCACCTCTGCAGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: WWVGLSGGKNLARGS*ERAPSGPSTSAEAG
Trigger: GCCAGCCTCTGCAGAGGTGGAGGGCCCTGACGGAGCCCTCTCCCAGCTTCCCCTGGCCAAGTTCTTCCCTCCGGACAACCCCACCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGCCGCCTGGGCCCGGATCTaGTCTCTCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LGSGRCSRWMPRPPDQPAAWARI*SLSCSS
Trigger: GCTGGAGCAGCTGAGAGACAAGATCCGGGCCCAGGC...GGCTGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp CTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGCCCCTGCAGCCTCCGCTTaGATGGCCCGAGCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LGSGRCSRWMPRPPDQPAPAASA*MARALA
Trigger: GGCAAGAGCTCGGGCCATCAAAGCGGAGGCTGCAGG...GGCTGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp AGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCACCTGCAGCCTCCGCTTaGATGGCCCGAGCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: RVLQRSPRQHEALKPRASPAASA*MARALA
Trigger: GGCAAGAGCTCGGGCCATCAAAGCGGAGGCTGCAGG...TGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp GTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCACTTGGCAGGGCATGCTaGGCAGCCGAGACGGGGGAG +
Preference number: 5 (lower is better)
Translates to: VLGSGRCSRWMPRPPDQPLGRAC*AAETGE
Trigger: CTCCCCCGTCTCGGCTGCCAAGCATGCCCTGCCAAG...TGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp CAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCCGCTGCTTGAGGACTTaGGCTGTGGTCTCTAGCGCC +
Preference number: 5 (lower is better)
Translates to: QEGPTAQPTPARGPQAQGRCLRT*AVVSSA
Trigger: GGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCG...GCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS GCA 90 bp CAGATGCTTAGGCACCTGGGCACGGACAGAACGCACGCCACGCAGTaGCCCTCCCCACGGCCCCAGGGCTGTGATTGCACGCAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: QMLRHLGTDRTHATQ*PSPRPQGCDCTQCG
Trigger: TCCACACTGCGTGCAATCACAGCCCTGGGGCCGTGGGGAGGGGCACTGCGTGGCGTGCGTTCTGTCCGTGCCCAGGTGCCTAAGCATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 90 bp GCAGAGCCTGGGCTTGGCAACAGCCTTCCAGTCGGCTGCTCTCCCTaGGGCCCCATGGGAGAAGGGGCCCTGCCTCTGGCTGTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: AEPGLGNSLPVGCSP*GPMGEGALPLAVLV
Trigger: CACAAGAACAGCCAGAGGCAGGGCCCCTTCTCCCATGGGGCCCCAGGGAGAGCAGCCGACTGGAAGGCTGTTGCCAAGCCCAGGCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp TCTCTGCCGCAGGAGCGTCGGCTGCGTTCCCTGAAGCTCCCCACATaGCTGTCTGTTGGAGCCCGGGGCTTCCCTGCTAAGGAAGGGCCG +
Preference number: 5 (lower is better)
Translates to: SLPQERRLRSLKLPT*LSVGARGFPAKEGP
Trigger: CGGCCCTTCCTTAGCAGGGAAGCCCCGGGCTCCAACAGACAGCCATGTGGGGAGCTTCAGGGAACGCAGCCGACGCTCCTGCGGCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp TGGGTCCCCAGGAGGAGCCTGCAGGGTCACCGGGGTCTCGGGCTCTaGCATGAGGTACGGGAGTTTGCTCTTGGTGGATGGGCTCGGGTC +
Preference number: 5 (lower is better)
Translates to: WVPRRSLQGHRGLGL*HEVREFALGGWARV
Trigger: GACCCGAGCCCATCCACCAAGAGCAAACTCCCGTACCTCATGCCAGAGCCCGAGACCCCGGTGACCCTGCAGGCTCCTCCTGGGGACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCCCCTCAGGTGGGTCATaGAAACTGGGCTGGCACGGT +
Preference number: 5 (lower is better)
Translates to: VQGATESAPPTDGVSSSPPSGGS*KLGWHG
Trigger: ACCGTGCCAGCCCAGTTTCAATGACCCACCTGAGGG...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp TGCGGGCTGCGCAGAAATGACCTTGGGCCCTTGAGCCGTGGCTTCCTCTGGTCTAGCTCTTGCCCTCCCTaGCGGGCCTGGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CGLRRNDLGPLSRGFLWSSSCPP*RAWASS
Trigger: GGAGCTGGCCCAGGCCCGCAAGGGAGGGCAAGAGCT...AGACCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATTTCTGCGCAGCCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACCAGCCAGCTCACACTCTGCTGTaGCTCCCAGCTGGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: VLGSGRCSRWMPRPPDQPAHTLL*LPAGAP
Trigger: TGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAGC...TGGCTGGTCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS TCA 90 bp CCCCAGGAGGAGCCTGCAGGGTCACCGGGGTCTCGGGCTCTGGCATaGGGTACGGGAGTTTGCTCTTGGTGGATGGGCTCGGGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: PQEEPAGSPGSRALA*GTGVCSWWMGSGQH
Trigger: ATGCTGACCCGAGCCCATCCACCAAGAGCAAACTCCCGTACCTCATGCCAGAGCCCGAGACCCCGGTGACCCTGCAGGCTCCTCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 90 bp AAGTCCACGGTGAGAGCCGGGTCTCTCGAGGGATCCTTGCTATGGTaGCTGCGGAGGACGGGAGGGGGCCCAAGCAGCGACCTCACCAGA +
Preference number: 5 (lower is better)
Translates to: KSTVRAGSLEGSLLW*LRRTGGGPSSDLTR
Trigger: TCTGGTGAGGTCGCTGCTTGGGCCCCCTCCCGTCCTCCGCAGGCACCATAGCAAGGATCCCTCGAGAGACCCGGCTCTCACCGTGGACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp AGCGCTTCGGCACCCTGCAGCTTGGCGGTGAGGCTATCGACCCGCTaGTTGAGGACTTTGGCTGTGGTCTCTAGCGCCTGCAGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: SASAPCSLAVRLSTR*LRTLAVVSSACSCA
Trigger: GGCGCAGCTGCAGGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGGGTGCCGAAGCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp AGGCCCACAGCTGGGTCCCTGACGGTGTCCAGCGCTTCGGCACCCTaGAGCTTGGCGGTGAGGCTATCGACCCGCTGCTTGAGGACTTTG +
Preference number: 5 (lower is better)
Translates to: RPTAGSLTVSSASAP*SLAVRLSTRCLRTL
Trigger: CAAAGTCCTCAAGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGGGTGCCGAAGCGCTGGACACCGTCAGGGACCCAGCTGTGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp TCCAGGTTAGGAGCACCGGCCTTGGGCTGGACGGGTGGGAGGCTCTaGCTCTGTGCAGCCCCGGGCAGGCTGTGGAAACTCTGTGAACCT +
Preference number: 5 (lower is better)
Translates to: SRLGAPALGWTGGRL*LCAAPGRLWKLCEP
Trigger: AGGTTCACAGAGTTTCCACAGCCTGCCCGGGGCTGCACAGAGGCAGAGCCTCCCACCCGTCCAGCCCAAGGCCGGTGCTCCTAACCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 90 bp TGGCCACCACATTCTCTGGCCTGTCCTCGGGACCCTGGGAGGACGTaGCAGCATCTGTGTCCAGAGGCGGGTGTGACCTGGGTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: WPPHSLACPRDPGRT*QHLCPEAGVTWVWP
Trigger: TGGCCACACCCAGGTCACACCCGCCTCTGGACACAGATGCTGCCACGTCCTCCCAGGGTCCCGAGGACAGGCCAGAGAATGTGGTGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCCTGGAGGGGGATTTTTaGCCTCTTGGCCTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: APGFTPWSAGSTGRGTQALEGDF*PLGLSS
Trigger: GGAGGAAAGGCCAAGAGGCAAAAAATCCCCCTCCAG...GGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGTGGCCGTGGGATGCCTaGGCTTCAACTCTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLWPWDA*ASTLRS
Trigger: TGAGCGCAGAGTTGAAGCCAAGGCATCCCACGGCCA...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp GTGCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCGGTGCTCAGCCTCCTTaGGGTCCAGGTAGATGCACA +
Preference number: 5 (lower is better)
Translates to: VQGATESAPPTDGVSSSPGAQPP*GPGRCT
Trigger: TGTGCATCTACCTGGACCCAAAGGAGGCTGAGCACC...GGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp CTCCTCCAGTCCCAGGGAGCCCCAGATAGGGTGCAGCGTGGCTGGGCCCGCATACGCTGCTTGAGGACTTaGGCTGTGGTCTCTAGCGCC +
Preference number: 5 (lower is better)
Translates to: LLQSQGAPDRVQRGWARIRCLRT*AVVSSA
Trigger: GGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCG...TATGCGGGCCCAGCCACGCTGCACCCTATCTGGGGCTCCCTGGGACTGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGCTATCGACCCGCTGCTaGAGGACTTTGGCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: GATESAPPTDGVSSSPRELSTRC*RTLAVV
Trigger: GACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATAG...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCGCAGCCGCCACCGCATaGCGCCGCACGTCAGCACCA +
Preference number: 5 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVAAATA*RRTSAP
Trigger: TGGTGCTGACGTGCGGCGCAATGCGGTGGCGGCTGC...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 90 bp GGGACAGGACAGGCTGCTCACAGAGCCTGCTGGGGAGGTGTGGGATaGCACCGTGGCTTCTTCCGAAGGCCCCCAGCAGGTTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GTGQAAHRACWGGVG*HRGFFRRPPAGSRS
Trigger: GCTTCTGGAACCTGCTGGGGGCCTTCGGAAGAAGCCACGGTGTCATCCCACACCTCCCCAGCAGGCTCTGTGAGCAGCCTGTCCTGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 90 bp AGGACTTTGGCTGTGGTCTCTAGCGCCTGCAGCTGCGCCTGCTTATaGCGGAGGTGCAGGGAGCTGGAAGTGCCCAGGTGCTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RTLAVVSSACSCACL*RRCRELEVPRCSAS
Trigger: GGAGGCTGAGCACCTGGGCACTTCCAGCTCCCTGCACCTCCGGCATAAGCAGGCGCAGCTGCAGGCGCTAGAGACCACAGCCAAAGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp ACCCGCTGCTTGAGGACTTTGGCTGTGGTCTCTAGCGCCTGCAGCTaGGCCTGCTTATGCCGGAGGTGCAGGGAGCTGGAAGTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TRCLRTLAVVSSACS*ACLCRRCRELEVPR
Trigger: CCTGGGCACTTCCAGCTCCCTGCACCTCCGGCATAAGCAGGCGCAGCTGCAGGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp TCTCTCAGCTGCTCCAGCCGCGCGTCACTCTTTCTGGGCCTCTGCTaGGGCCCCAACACCTGGGGTGGCCTCTCCTTCCAAGACACACAC +
Preference number: 5 (lower is better)
Translates to: SLSCSSRASLFLGLC*GPNTWGGLSFQDTH
Trigger: GTGTGTGTCTTGGAAGGAGAGGCCACCCCAGGTGTTGGGGCCCCAGCAGAGGCCCAGAAAGAGTGACGCGCGGCTGGAGCAGCTGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp TCGGTCCTTGCACATCGGAGGCTGCTCCAGCTTCAACGCCTCCTCTaGCCTGGCCTGGGTCGAGTGTCTCTCCATCAGCTGCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: SVLAHRRLLQLQRLL*PGLGRVSLHQLLQP
Trigger: CGGCTGGAGCAGCTGATGGAGAGACACTCGACCCAGGCCAGGCCAGAGGAGGCGTTGAAGCTGGAGCAGCCTCCGATGTGCAAGGACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp GCGGGTGTGACCTGGGTGTGGCCATCCCTGTGCTCTGAGAGGCTGTaGTCGGCTCTCGGTCCTTGCACATCGGAGGCTGCTCCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: AGVTWVWPSLCSERL*SALGPCTSEAAPAS
Trigger: TGAAGCTGGAGCAGCCTCCGATGTGCAAGGACCGAGAGCCGACCACAGCCTCTCAGAGCACAGGGATGGCCACACCCAGGTCACACCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp AACAGTCCCTCCGGCAGACTCTCCTCAGACAAGGAGGACAAATCCTaGGTGGTGATGGCGGTGTCCTCCTCAAGGGGCCCCGAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: NSPSGRLSSDKEDKS*VVMAVSSSRGPEGG
Trigger: CCCGCCCTCGGGGCCCCTTGAGGAGGACACCGCCATCACCACCCAGGATTTGTCCTCCTTGTCTGAGGAGAGTCTGCCGGAGGGACTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp ACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGCCTGGAGGGGGATTTTTaGCCTCTTGGCCTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: TAQPTPARGPQAQGFSSCLEGDF*PLGLSS
Trigger: GGAGGAAAGGCCAAGAGGCAAAAAATCCCCCTCCAG...GCAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp GGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGTAGCTCTTGCCCTCCCTaGCGGGCCTGGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GHQAVGTARWKPRMKTLSSSCPP*RAWASS
Trigger: GGAGCTGGCCCAGGCCCGCAAGGGAGGGCAAGAGCT...ACTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCGCTCACACTCTGCTGTaGCTCCCAGCTGGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSAHTLL*LPAGAP
Trigger: TGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAGC...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGCCTCTCTGCAGCCTTTaGTCTGGTTTCACGTCCACG +
Preference number: 5 (lower is better)
Translates to: GATESAPPTDGVSSSPREPLCSL*SGFTST
Trigger: CGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGG...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAGTCGGCTCTCGGTCCTaGCACATCGGAGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERVGSRS*HIGGCS
Trigger: GGAGCAGCCTCCGATGTGCAAGGACCGAGAGCCGAC...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCGCGTGGCCTTTGAGCTaGCGGGGCTGCTCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPAWPLS*RGCSGG
Trigger: GCCCCCAGAGCAGCCCCGCAAGCTCAAAGGCCACGC...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GTGACCTGGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGGGCGGCCAAGGGCACTaGGCCTGGGAGAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VTWHLRALPRQLCDASHQGGQGH*AWERGC
Trigger: GCAGCCTCTCTCCCAGGCCAAGTGCCCTTGGCCGCC...CTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GTGACCTGGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGTCTGGAGAGGGGCTCTaGCCTCACGGCAGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: VTWHLRALPRQLCDASHQSGEGL*PHGRGP
Trigger: GGGCCCCCTGCCGTGAGGCAAGAGCCCCTCTCCAGA...CTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 90 bp ATGGGGAGGATGTCCACAGGCCCCGGCATGGAGACGACGTCCCTCTaGTGCTGCAGAAGCAGCTTCCTGTCCCGGTGCCTGAACAGCTGC +
Preference number: 5 (lower is better)
Translates to: MGRMSTGPGMETTSL*CCRSSFLSRCLNSC
Trigger: GCAGCTGTTCAGGCACCGGGACAGGAAGCTGCTTCTGCAGCATCAGAGGGACGTCGTCTCCATGCCGGGGCCTGTGGACATCCTCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 90 bp CCTGCAGCTGCGCCTGCTTATGCCGGAGGTGCAGGGAGCTGGAAGTaGCCAGGTGCTCAGCCTCCTTTGGGTCCAGGTAGATGCACATCC +
Preference number: 5 (lower is better)
Translates to: PAAAPAYAGGAGSWK*PGAQPPLGPGRCTS
Trigger: GGATGTGCATCTACCTGGACCCAAAGGAGGCTGAGCACCTGGGCACTTCCAGCTCCCTGCACCTCCGGCATAAGCAGGCGCAGCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp GAAGGAAAGACCAGCAGTGAGTCCGAGTCACCGGCAGAAGAGATTTaGAGCGGGAACACCACACCGGCGGCCTCAGGGGGTGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: EGKTSSESESPAEEI*SGNTTPAASGGAWR
Trigger: CCTCCAGGCACCCCCTGAGGCCGCCGGTGTGGTGTTCCCGCTGCAAATCTCTTCTGCCGGTGACTCGGACTCACTGCTGGTCTTTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp CCAGCCCAGCCTGGATTTGCTGGCGCAGGTCTTGTAGGATGGCCATaGCCGTCTGTATGGTCGCTGGCTGGTCGAAGGAAGCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PAQPGFAGAGLVGWP*PSVWSLAGRRKPGW
Trigger: CCAGCCTGGCTTCCTTCGACCAGCCAGCGACCATACAGACGGCCATGGCCATCCTACAAGACCTGCGCCAGCAAATCCAGGCTGGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp CCTTTGGGTCCAGGTAGATGCACATCCCCCGGGGTAGGTAGCGGGTaGTCAGGTCCTGGAGCTCCAGGGATCCCAGAGAGGGTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PLGPGRCTSPGVGSG*SGPGAPGIPERVKL
Trigger: CAGCTTCACCCTCTCTGGGATCCCTGGAGCTCCAGGACCTGACCACCCGCTACCTACCCCGGGGGATGTGCATCTACCTGGACCCAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp CTCCTCTGGAAAACCTTGGAGAAGAGGGCACCTGGCTTCACTCCCTaGTCAGCCGGGAGCACGGGACGGGGGACCCAAGCCATCACAGCA +
Preference number: 5 (lower is better)
Translates to: LLWKTLEKRAPGFTP*SAGSTGRGTQAITA
Trigger: TGCTGTGATGGCTTGGGTCCCCCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAAGGTTTTCCAGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS CCA 90 bp AGAGAGGGACAGGACAGGCTGCTCACAGAGCCTGCTGGGGAGGTGTaGGATGACACCGTGGCTTCTTCCGAAGGCCCCCAGCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: REGQDRLLTEPAGEV*DDTVASSEGPQQVP
Trigger: TGGAACCTGCTGGGGGCCTTCGGAAGAAGCCACGGTGTCATCCCACACCTCCCCAGCAGGCTCTGTGAGCAGCCTGTCCTGTCCCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCTGGCCGTGGGATGCCTaGGCTTCAACTCTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: QARVLGSGRCSRWMPRPPWPWDA*ASTLRS
Trigger: TGAGCGCAGAGTTGAAGCCAAGGCATCCCACGGCCA...GGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp TTGGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGCGACCTCACCAGAGCTaGTCCCTTTCTCCAGGCGTA +
Preference number: 5 (lower is better)
Translates to: LEKRAPGFTPWSAGSTGRRPHQS*SLSPGV
Trigger: TACGCCTGGAGAAAGGGACAAGCTCTGGTGAGGTCG...CCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp CAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCTCTCTCGAGGGATCCTaGCTATGGTGCCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: QARVLGSGRCSRWMPRPPSLEGS*LWCLRR
Trigger: CCTCCGCAGGCACCATAGCAAGGATCCCTCGAGAGA...GGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGGGAAAACCTCGGGGCTaGCTCTCGCAGTGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQGKPRG*LSQWAL
Trigger: GAGGGCCCACTGCGAGAGCAAGCCCCGAGGTTTTCC...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 90 bp TGCTTGAGGACTTTGGCTGTGGTCTCTAGCGCCTGCAGCTGCGCCTaGTTATGCCGGAGGTGCAGGGAGCTGGAAGTGCCCAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: CLRTLAVVSSACSCA*LCRRCRELEVPRCS
Trigger: TGAGCACCTGGGCACTTCCAGCTCCCTGCACCTCCGGCATAAGCAGGCGCAGCTGCAGGCGCTAGAGACCACAGCCAAAGTCCTCAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 90 bp CTATCGACCCGCTGCTTGAGGACTTTGGCTGTGGTCTCTAGCGCCTaGAGCTGCGCCTGCTTATGCCGGAGGTGCAGGGAGCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: LSTRCLRTLAVVSSA*SCACLCRRCRELEV
Trigger: CACTTCCAGCTCCCTGCACCTCCGGCATAAGCAGGCGCAGCTGCAGGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp TTTGCCTCTTGGCCTTTCCTCCTAAGCATCAGCGTGGAGGCTTTGTaGAGTCTGGAGGCGCTGGAGGGGGCTGAGGTGCCCAGGGACGCA +
Preference number: 5 (lower is better)
Translates to: FASWPFLLSISVEAL*SLEALEGAEVPRDA
Trigger: TGCGTCCCTGGGCACCTCAGCCCCCTCCAGCGCCTCCAGACTCCACAAAGCCTCCACGCTGATGCTTAGGAGGAAAGGCCAAGAGGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp CGCAGGTCTTGTAGGATGGCCATGGCCGTCTGTATGGTCGCTGGCTaGTCGAAGGAAGCCAGGCTGGGTGTGTTCCCAGACACCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RRSCRMAMAVCMVAG*SKEARLGVFPDTCW
Trigger: CCAGCAGGTGTCTGGGAACACACCCAGCCTGGCTTCCTTCGACCAGCCAGCGACCATACAGACGGCCATGGCCATCCTACAAGACCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp CCAGCTCCAGCCCAGCCTGGATTTGCTGGCGCAGGTCTTGTAGGATaGCCATGGCCGTCTGTATGGTCGCTGGCTGGTCGAAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PAPAQPGFAGAGLVG*PWPSVWSLAGRRKP
Trigger: TGGCTTCCTTCGACCAGCCAGCGACCATACAGACGGCCATGGCCATCCTACAAGACCTGCGCCAGCAAATCCAGGCTGGGCTGGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp CGCGTGTCCTCTCTGGGTATGGGCACAGAGGCGTTTACTCTCGGCTaGAAGCTGCTGCTCTGCCTAGGAGCAGAGGGGCCGGCAACTGAT +
Preference number: 5 (lower is better)
Translates to: RVSSLGMGTEAFTLG*KLLLCLGAEGPATD
Trigger: ATCAGTTGCCGGCCCCTCTGCTCCTAGGCAGAGCAGCAGCTTCCAGCCGAGAGTAAACGCCTCTGTGCCCATACCCAGAGAGGACACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 90 bp GGTCTCGGGCTCTGGCATGAGGTACGGGAGTTTGCTCTTGGTGGATaGGCTCGGGTCAGCATCCCGGGTTCCCTCCTGGTAGCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: GLGLWHEVREFALGG*ARVSIPGSLLVARS
Trigger: ACTTCTGGCTACCAGGAGGGAACCCGGGATGCTGACCCGAGCCCATCCACCAAGAGCAAACTCCCGTACCTCATGCCAGAGCCCGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CCCCAGCCAGGAGGGTCCTACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCTCCGAATCTTCGTCTTaGTGTTTGTCTTTGGCCGCT +
Preference number: 5 (lower is better)
Translates to: PQPGGSYSAAHASTRPSSSESSS*CLSLAA
Trigger: AGCGGCCAAAGACAAACACAAAGACGAAGATTCGGA...GCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTAGGACCCTCCTGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTCTCTCGAGGGATCCTaGCTATGGTGCCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPSLEGS*LWCLRR
Trigger: CCTCCGCAGGCACCATAGCAAGGATCCCTCGAGAGA...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCACAGCTCTGTCCCTCTaGCTGTCCAGGCACCCTCGT +
Preference number: 5 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSTALSL*LSRHPR
Trigger: ACGAGGGTGCCTGGACAGCAAGAGGGACAGAGCTGT...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GTCATGTGCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGCAGGCGGCCTTGACTTaGGGGCTGGAACCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VMCRQFGCGRSLQSQSRQQAALT*GLEPCC
Trigger: GCAGCAGGGTTCCAGCCCCAAAGTCAAGGCCGCCTG...CTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGCACATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCCCCTCCCAGGCGGCCTaGACTTTGGGGCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRPSQAA*TLGLEP
Trigger: GGGTTCCAGCCCCAAAGTCAAGGCCGCCTGGGAGGG...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTGCTCTGACCCTGACCTaGGAGAGGGGATGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPALTLT*ERGCLG
Trigger: TCCCAGACATCCCCTCTCCAAGGTCAGGGTCAGAGC...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp AGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGGGCTCACCCCTGGTGGGGGTCTaGGCCAAGCAGGCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: RSLQSQSRQMPLTSKQGSPLVGV*AKQARL
Trigger: CAGCCGAGCCTGCTTGGCCAAGACCCCCACCAGGGG...TGAGCCCTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCAGTCTCATGTGCCGGCAGTTaGGGTGTGGGAGGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: AVASSGLCSSGVRHPCPVSCAGS*GVGGAS
Trigger: GGAGGCTCCTCCCACACCCAAACTGCCGGCACATGA...GACTGGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 90 bp CAGCTTCCCCCGAGGAGTGTCGGGCAGAGAGCTCTCCAGGCCAGCTaGAACCTTCGTCTGGGGAGTCTTCAGCTTCCAAGCTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: QLPPRSVGQRALQAS*NLRLGSLQLPSWEE
Trigger: CTCTTCCCAGCTTGGAAGCTGAAGACTCCCCAGACGAAGGTTTCAGCTGGCCTGGAGAGCTCTCTGCCCGACACTCCTCGGGGGAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 90 bp GGTATGGGCACAGAGGCGTTTACTCTCGGCTGGAAGCTGCTGCTCTaGCTAGGAGCAGAGGGGCCGGCAACTGATGACACGGGACAGATG +
Preference number: 5 (lower is better)
Translates to: GMGTEAFTLGWKLLL*LGAEGPATDDTGQM
Trigger: CATCTGTCCCGTGTCATCAGTTGCCGGCCCCTCTGCTCCTAGGCAGAGCAGCAGCTTCCAGCCGAGAGTAAACGCCTCTGTGCCCATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 90 bp GAGGGGATGTCTGGGAAAGGCAGTAGCCAGCCTGCCTTTGGGCTTTaGTCCGGCGCTGAAACTTCTGCCATGGCCGTGTCCAAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: EGMSGKGSSQPAFGL*SGAETSAMAVSKEE
Trigger: CTCCTCCTTGGACACGGCCATGGCAGAAGTTTCAGCGCCGGAGCAAAGCCCAAAGGCAGGCTGGCTACTGCCTTTCCCAGACATCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp GGATTTGCTGGCGCAGGTCTTGTAGGATGGCCATGGCCGTCTGTATaGTCGCTGGCTGGTCGAAGGAAGCCAGGCTGGGTGTGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: GFAGAGLVGWPWPSV*SLAGRRKPGWVCSQ
Trigger: CTGGGAACACACCCAGCCTGGCTTCCTTCGACCAGCCAGCGACCATACAGACGGCCATGGCCATCCTACAAGACCTGCGCCAGCAAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp GGAGTGTCGGGCAGAGAGCTCTCCAGGCCAGCTGAAACCTTCGTCTaGGGAGTCTTCAGCTTCCAAGCTGGGAAGAGAGCTGGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: GVSGRELSRPAETFV*GVFSFQAGKRAGAP
Trigger: GGGAGCTCCAGCTCTCTTCCCAGCTTGGAAGCTGAAGACTCCCCAGACGAAGGTTTCAGCTGGCCTGGAGAGCTCTCTGCCCGACACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CCTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGGGTCCTGGTTCCTaGAGGTCGTCAGACCCGACC +
Preference number: 5 (lower is better)
Translates to: PWAPGSGHCSLETPDENTQGPGS*RSSDPT
Trigger: GGTCGGGTCTGACGACCTCAAGGAACCAGGACCCTG...AGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGTGGCCGTGGGATGCCTaGGCTTCAACTCTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQWPWDA*ASTLRS
Trigger: TGAGCGCAGAGTTGAAGCCAAGGCATCCCACGGCCA...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGGGGGTCTTCTCTCTTTaGCAAGAACTGCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: GATESAPPTDGVSSSPREGVFSL*QELLLT
Trigger: GGTCAAAAGCAGTTCTTGCAAAAGAGAGAAGACCCC...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp GGATTTCTCTACCCCGTAGGGCCAAGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGCACCCTGCAGCTaGGCGGTGAGGCTATCGACC +
Preference number: 5 (lower is better)
Translates to: GFLYPVGPSSSARQWKVFSAPCS*AVRLST
Trigger: GGTCGATAGCCTCACCGCCAAGCTGCAGGGTGCCGA...GAACACCTTCCACTGCCTAGCACTCGAGCTTGGCCCTACGGGGTAGAGAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp GGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGTCGGCACCCTGCAGCTaGGCGGTGAGGCTATCGACC +
Preference number: 5 (lower is better)
Translates to: GCHEISTWVSSTEGPSLQSAPCS*AVRLST
Trigger: GGTCGATAGCCTCACCGCCAAGCTGCAGGGTGCCGA...CTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCTCCGGAGGGAAGAACTaGGCCAGGGGAAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPSGGKN*ARGSWE
Trigger: CTCCCAGCTTCCCCTGGCCAAGTTCTTCCCTCCGGA...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TTTCTTGGACGCCTCTTCGTGGCTTTGATGCGAAGAAGCAGGTGTGCAGTCCGGGAGGGCGCGTGGCCTTaGAGCTTGCGGGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: FLGRLFVALMRRSRCAVREGAWP*SLRGCS
Trigger: AGAGCAGCCCCGCAAGCTCAAAGGCCACGCGCCCTC...CCGGACTGCACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCGTCCAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 90 bp GCATTACAGGAGTGGCCAGCGAGCTGGCACTGCTCACACTTGGAGTaGGGGTCCCACAAAGCCAATCTCAGGCGTTCACTCCACCTGGGG +
Preference number: 5 (lower is better)
Translates to: ALQEWPASWHCSHLE*GSHKANLRRSLHLG
Trigger: CCCCAGGTGGAGTGAACGCCTGAGATTGGCTTTGTGGGACCCTCACTCCAAGTGTGAGCAGTGCCAGCTCGCTGGCCACTCCTGTAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 90 bp GTTATATTGTACGCATGTTTCCACGGCCTTCCGGAACCTTCTGGGTaGCCGGGTCCCTACATCGCAGTCCCCTTCTGCTCGGCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: VILYACFHGLPEPSG*PGPYIAVPFCSASG
Trigger: GCCAGAGGCCGAGCAGAAGGGGACTGCGATGTAGGGACCCGGGCACCCAGAAGGTTCCGGAAGGCCGTGGAAACATGCGTACAATATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 90 bp GGGAAGAGAGCTGGAGCTCCCAGAAAGCTGGATCAGGGTAGCCGCTaGTTTCTGGAACTCCCAGAGAGAGGGACAGGACAGGCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: GKRAGAPRKLDQGSR*FLELPERGTGQAAH
Trigger: GTGAGCAGCCTGTCCTGTCCCTCTCTCTGGGAGTTCCAGAAAGCAGCGGCTACCCTGATCCAGCTTTCTGGGAGCTCCAGCTCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 90 bp TACAGGGTTCTGGCAGGTCCTCCTCGCAGTCCTCCTCCCAAACTTTaGTGGAGGCCTCTGACAGCTCTGACCCTGACCTTGGAGAGGGGA +
Preference number: 5 (lower is better)
Translates to: YRVLAGPPRSPPPKL*WRPLTALTLTLERG
Trigger: TCCCCTCTCCAAGGTCAGGGTCAGAGCTGTCAGAGGCCTCCAGCAAAGTTTGGGAGGAGGACTGCGAGGAGGACCTGCCAGAACCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp GGACAGGACTCCCGTGCAGTGGAGGAGCTCCAGGGCTCCCAGGTGTaGACACTCCTAGCCCTCTCTAAAGAGGAATGCTTCCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GQDSRAVEELQGSQV*TLLALSKEECFLSV
Trigger: GACAGAGAGGAAGCATTCCTCTTTAGAGAGGGCTAGGAGTGTCCACACCTGGGAGCCCTGGAGCTCCTCCACTGCACGGGAGTCCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 90 bp TGGAGTGAGGGTCCCACAAAGCCAATCTCAGGCGTTCACTCCACCTaGGGGCTCTTGCTGGTGTCTCCAAAACGCTGTGGTTCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: WSEGPTKPISGVHST*GLLLVSPKRCGSVA
Trigger: GGCCACCGAACCACAGCGTTTTGGAGACACCAGCAAGAGCCCCCAGGTGGAGTGAACGCCTGAGATTGGCTTTGTGGGACCCTCACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 90 bp GAGCTGGAGCTCCCAGAAAGCTGGATCAGGGTAGCCGCTGCTTTCTaGAACTCCCAGAGAGAGGGACAGGACAGGCTGCTCACAGAGCCT +
Preference number: 5 (lower is better)
Translates to: ELELPESWIRVAAAF*NSQREGQDRLLTEP
Trigger: AGGCTCTGTGAGCAGCCTGTCCTGTCCCTCTCTCTGGGAGTTCCAGAAAGCAGCGGCTACCCTGATCCAGCTTTCTGGGAGCTCCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp AGGGTTCTGGCAGGTCCTCCTCGCAGTCCTCCTCCCAAACTTTGCTaGAGGCCTCTGACAGCTCTGACCCTGACCTTGGAGAGGGGATGT +
Preference number: 5 (lower is better)
Translates to: RVLAGPPRSPPPKLC*RPLTALTLTLERGC
Trigger: ACATCCCCTCTCCAAGGTCAGGGTCAGAGCTGTCAGAGGCCTCCAGCAAAGTTTGGGAGGAGGACTGCGAGGAGGACCTGCCAGAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GTGACCTGGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGCCCTCAGGTGGGTCATaGAAACTGGGCTGGCACGGT +
Preference number: 5 (lower is better)
Translates to: VTWHLRALPRQLCDASHQPSGGS*KLGWHG
Trigger: ACCGTGCCAGCCCAGTTTCAATGACCCACCTGAGGG...CTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CGCCTCTCTGCAGCCTTTTGTCTGGTTTCACGTCCACGTGTCCCTCCTCTGGAACAGGGTCCTGGTTCCTaGAGGTCGTCAGACCCGACC +
Preference number: 5 (lower is better)
Translates to: RLSAAFCLVSRPRVPPLEQGPGS*RSSDPT
Trigger: GGTCGGGTCTGACGACCTCAAGGAACCAGGACCCTG...TTCCAGAGGAGGGACACGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp GCAGGGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGCTGCTTTTGACCCTTTaGGGTTTTTCCCTCAGAACA +
Preference number: 5 (lower is better)
Translates to: AGRHRICPSDRRRLLQSQLLLTL*GFSLRT
Trigger: TGTTCTGAGGGAAAAACCCAAAAGGGTCAAAAGCAG...CTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGGGGGTCTTCTCTCTTTaGCAAGAACTGCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLGVFSL*QELLLT
Trigger: GGTCAAAAGCAGTTCTTGCAAAAGAGAGAAGACCCC...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp AGCTCGAGTGCTAGGCAGTGGAAGGTGTTCTCGGTGGATGCCCCGGCCACCCGACAAACCGGTGAGCACTaGGCAGCTATGACTTTCTCG +
Preference number: 5 (lower is better)
Translates to: SSSARQWKVFSVDAPATRQTGEH*AAMTFS
Trigger: CGAGAAAGTCATAGCTGCCAAGTGCTCACCGGTTTG...TCGGGTGGCCGGGGCATCCACCGAGAACACCTTCCACTGCCTAGCACTCGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp GTGACCTGGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGCGCTGCTTGAGGACTTaGGCTGTGGTCTCTAGCGCC +
Preference number: 5 (lower is better)
Translates to: VTWHLRALPRQLCDASHQRCLRT*AVVSSA
Trigger: GGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCG...CTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGTCGGCACCCTGCAGCTaGGCGGTGAGGCTATCGACC +
Preference number: 5 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQSAPCS*AVRLST
Trigger: GGTCGATAGCCTCACCGCCAAGCTGCAGGGTGCCGA...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCCCTCTCTGCAGCCTTTaGTCTGGTTTCACGTCCACG +
Preference number: 5 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSPLCSL*SGFTST
Trigger: CGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGG...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CTCAAGGGACCCAGACTTTCCACTGGCGGCCAAGGGCACTTGGCCTGGGAGAGAGCTGGAGGTCTTCTGTaGGGTGTTGGGAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: LKGPRLSTGGQGHLAWERAGGLL*GVGKAS
Trigger: AGATGCCTTCCCAACACCCAACAGAAGACCTCCAGC...TCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCTCTGCAGAGGCTGGCTaGGCCACCACATTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFSAEAG*ATTFSG
Trigger: GCCAGAGAATGTGGTGGCCAAGCCAGCCTCTGCAGA...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCGAGGCTCACCCTGGTTaGACCGCCAGGACAAAGGCA +
Preference number: 5 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFEAHPG*TARTKA
Trigger: TGCCTTTGTCCTGGCGGTCAAACCAGGGTGAGCCTC...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTATGAGGTACGGGAGTTaGCTCTTGGTGGATGGGCTC +
Preference number: 5 (lower is better)
Translates to: GVSHQSYGVEGLGSSVCPMRYGS*LLVDGL
Trigger: GAGCCCATCCACCAAGAGCAAACTCCCGTACCTCAT...AGGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 90 bp AGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGTGTGGTaGGCACAGAGCACGCAGAGGGTCCCGAAAGCCTCTAAAACCTTT +
Preference number: 5 (lower is better)
Translates to: STWVSSTEGPSLQVW*AQSTQRVPKASKTF
Trigger: AAAGGTTTTAGAGGCTTTCGGGACCCTCTGCGTGCTCTGTGCTCACCACACCTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp CATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGTGTGGCCCTCAGGTGGGTCATaGAAACTGGGCTGGCACGGT +
Preference number: 5 (lower is better)
Translates to: HEISTWVSSTEGPSLQVWPSGGS*KLGWHG
Trigger: ACCGTGCCAGCCCAGTTTCAATGACCCACCTGAGGG...CCACACCTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp AATGGGGACCCTGACACAGGCCGGCCATTGTTAACGGCACCTGGGGCTAAGCAGCTGGAGGGGGATTTTTaGCCTCTTGGCCTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: NGDPDTGRPLLTAPGAKQLEGDF*PLGLSS
Trigger: GGAGGAAAGGCCAAGAGGCAAAAAATCCCCCTCCAG...CTGCTTAGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTCAGGGTCCCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GGCGCCACAGAATCTGCCCCTCCGACCGACGGCGTCTCCTCCAGTCCCAGGGAGTTGCAAGAACTGCTTTaGACCCTTTTGGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: GATESAPPTDGVSSSPRELQELL*TLLGFS
Trigger: GGAAAAACCCAAAAGGGTCAAAAGCAGTTCTTGCAA...CTCCCTGGGACTGGAGGAGACGCCGTCGGTCGGAGGGGCAGATTCTGTGGCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp TTGGAGAAGAGGGCACCTGGCTTCACTCCCTGGTCAGCCGGGAGCACGGGACGGTCCGAATCTTCGTCTTaGTGTTTGTCTTTGGCCGCT +
Preference number: 5 (lower is better)
Translates to: LEKRAPGFTPWSAGSTGRSESSS*CLSLAA
Trigger: AGCGGCCAAAGACAAACACAAAGACGAAGATTCGGA...CCGTCCCGTGCTCCCGGCTGACCAGGGAGTGAAGCCAGGTGCCCTCTTCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563590.2
CDS-3UTR CAA 90 bp ACGGGGCATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCACGACCTCACCAGAGCTaGTCCCTTTCTCCAGGCGTA +
Preference number: 5 (lower is better)
Translates to: TGHGCHEISTWVSSTEGPRPHQS*SLSPGV
Trigger: TACGCCTGGAGAAAGGGACAAGCTCTGGTGAGGTCG...TGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATGCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCCGACCTCACCAGAGCTaGTCCCTTTCTCCAGGCGTA +
Preference number: 5 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPRPHQS*SLSPGV
Trigger: TACGCCTGGAGAAAGGGACAAGCTCTGGTGAGGTCG...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TTGAGCCGTGGCTTCCTCTGGTCTGTGCAGCTCAGGTGTGAGACATCCATGCCCGGTGCTCAGCCTCCTTaGGGTCCAGGTAGATGCACA +
Preference number: 5 (lower is better)
Translates to: LSRGFLWSVQLRCETSMPGAQPP*GPGRCT
Trigger: TGTGCATCTACCTGGACCCAAAGGAGGCTGAGCACC...GGGCATGGATGTCTCACACCTGAGCTGCACAGACCAGAGGAAGCCACGGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGTCTATCGACCCGCTGCTaGAGGACTTTGGCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: GHQAVGTARWKPRMKTLSLSTRC*RTLAVV
Trigger: GACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATAG...ACTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp AGTCGAATCCGAGCTGATGGGACTGTAAGGAAGCGCCCTAGGAGGTGGGCTGGGCCTCTCTGCAGCCTTTaGTCTGGTTTCACGTCCACG +
Preference number: 5 (lower is better)
Translates to: SRIRADGTVRKRPRRWAGPLCSL*SGFTST
Trigger: CGTGGACGTGAAACCAGACAAAAGGCTGCAGAGAGG...CCCAGCCCACCTCCTAGGGCGCTTCCTTACAGTCCCATCAGCTCGGATTCGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTTCTCTCTTCCTCTCTaGGCCTTCGCTGATCCCCAT +
Preference number: 5 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSFSLPL*AFADPH
Trigger: ATGGGGATCAGCGAAGGCCAAGAGAGGAAGAGAGAA...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 90 bp GAGGCTCTGCCTCTGTGCAGCCCCGGGCAGGCTGTGGAAACTCTGTaGACCTCGGTTGCCTCATCTACAAAATGGGAGCAAGACTGCCAA +
Preference number: 5 (lower is better)
Translates to: EALPLCSPGQAVETL*TSVASSTKWEQDCQ
Trigger: TTGGCAGTCTTGCTCCCATTTTGTAGATGAGGCAACCGAGGTTCACAGAGTTTCCACAGCCTGCCCGGGGCTGCACAGAGGCAGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS TCA 90 bp CGACGTCCCTCTGATGCTGCAGAAGCAGCTTCCTGTCCCGGTGCCTaGACAGCTGCGTGTGTCTCAGGTATTGGATTTCCCTCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: RRPSDAAEAASCPGA*TAACVSGIGFPSAP
Trigger: AGGAGCAGAGGGAAATCCAATACCTGAGACACACGCAGCTGTTCAGGCACCGGGACAGGAAGCTGCTTCTGCAGCATCAGAGGGACGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 90 bp AGGTATTGGATTTCCCTCTGCTCCTTCTCCAATCTGCTGAGGGCTTaGTGCTGCTTCTCAACCAGCGCGGCCAGCACAGCTCTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: RYWISLCSFSNLLRA*CCFSTSAASTALSL
Trigger: GAGGGACAGAGCTGTGCTGGCCGCGCTGGTTGAGAAGCAGCAGCAAGCCCTCAGCAGATTGGAGAAGGAGCAGAGGGAAATCCAATACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp ATGGAGCATTACAGGAGTGGCCAGCGAGCTGGCACTGCTCACACTTaGAGTGAGGGTCCCACAAAGCCAATCTCAGGCGTTCACTCCACC +
Preference number: 5 (lower is better)
Translates to: MEHYRSGQRAGTAHT*SEGPTKPISGVHST
Trigger: GGTGGAGTGAACGCCTGAGATTGGCTTTGTGGGACCCTCACTCCAAGTGTGAGCAGTGCCAGCTCGCTGGCCACTCCTGTAATGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS-3UTR CAA 90 bp TACAGCGCAGCCCACGCCAGCACGAGGCCCTCAAGCCCAGGGCTTCAGCAGCTGTTGCAAGAACTGCTTTaGACCCTTTTGGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: YSAAHASTRPSSPGLQQLLQELL*TLLGFS
Trigger: GGAAAAACCCAAAAGGGTCAAAAGCAGTTCTTGCAA...CAGCTGCTGAAGCCCTGGGCTTGAGGGCCTCGTGCTGGCGTGGGCTGCGCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp CATGGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGTCTCTCGAGGGATCCTaGCTATGGTGCCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: HGCHEISTWVSSTEGPSLSLEGS*LWCLRR
Trigger: CCTCCGCAGGCACCATAGCAAGGATCCCTCGAGAGA...CAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp GGCTGTCATGAAATAAGCACGTGGGTCTCATCCACCGAGGGCCCATCACTGCAGGGTGCTCAGCCTCCTTaGGGTCCAGGTAGATGCACA +
Preference number: 5 (lower is better)
Translates to: GCHEISTWVSSTEGPSLQGAQPP*GPGRCT
Trigger: TGTGCATCTACCTGGACCCAAAGGAGGCTGAGCACC...CTGCAGTGATGGGCCCTCGGTGGATGAGACCCACGTGCTTATTTCATGACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp TGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGAGTGGGCACTGCTCGTaGGAAACCCCGGATGAAAAC +
Preference number: 5 (lower is better)
Translates to: WAPGSGHCSLETPDENTQSGHCS*ETPDEN
Trigger: GTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACT...CTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCCATCTGCATCGGAGGTaGTCTGGGGTGGCGTCACAT +
Preference number: 5 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRHLHRR*SGVASH
Trigger: ATGTGACGCCACCCCAGACAACCTCCGATGCAGATG...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGACTTCTAAGCAGCTGCTCCCCAGGCTCTaGACTGACATGGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: CGRSLQSQSRQMPLTSKQLLPRL*TDMAAT
Trigger: AGTGGCAGCCATGTCAGTCAAGAGCCTGGGGAGCAG...CTGCTTAGAAGTCAGGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGCTCCCCGAGGCTGGCTaGGCCCCGGTACAGGGTTCT +
Preference number: 5 (lower is better)
Translates to: PVNISECQSPPLCICPVGLPEAG*APVQGS
Trigger: AGAACCCTGTACCGGGGCCAAGCCAGCCTCGGGGAG...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCGACACAGGCCGGCCATaGTTAACGGCACCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVDTGRP*LTAPGA
Trigger: AGCCCCAGGTGCCGTTAACAATGGCCGGCCTGTGTC...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp AATTGTTATATTGTACGCATGTTTCCACGGCCTTCCGGAACCTTCTaGGTGCCCGGGTCCCTACATCGCAGTCCCCTTCTGCTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: NCYIVRMFPRPSGTF*VPGSLHRSPLLLGL
Trigger: GAGGCCGAGCAGAAGGGGACTGCGATGTAGGGACCCGGGCACCCAGAAGGTTCCGGAAGGCCGTGGAAACATGCGTACAATATAACAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 90 bp CCAGCTTCAGAGAATCCAGAAAGCTGGAGGTCTTCTGTTGGGTGTTaGGAAGGCATCTCACACATGGGTCCTCCTGCTGACCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PASENPESWRSSVGC*EGISHMGPPADRSS
Trigger: GGAGCTGCGGTCAGCAGGAGGACCCATGTGTGAGATGCCTTCCCAACACCCAACAGAAGACCTCCAGCTTTCTGGATTCTCTGAAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 90 bp TCTTCAGCTTCCAAGCTGGGAAGAGAGCTGGAGCTCCCAGAAAGCTaGATCAGGGTAGCCGCTGCTTTCTGGAACTCCCAGAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SSASKLGRELELPES*IRVAAAFWNSQREG
Trigger: TCCCTCTCTCTGGGAGTTCCAGAAAGCAGCGGCTACCCTGATCCAGCTTTCTGGGAGCTCCAGCTCTCTTCCCAGCTTGGAAGCTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TGGGGTCTCTCACCAGAGCTATGGGGTAGAGGGCCTTGGCAGCTCCGTGTGTCCTCCGAATCTTCGTCTTaGTGTTTGTCTTTGGCCGCT +
Preference number: 5 (lower is better)
Translates to: WGLSPELWGRGPWQLRVSSESSS*CLSLAA
Trigger: AGCGGCCAAAGACAAACACAAAGACGAAGATTCGGA...GGACACACGGAGCTGCCAAGGCCCTCTACCCCATAGCTCTGGTGAGAGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCAGCAAACCGGTGAGCACTaGGCAGCTATGACTTTCTCG +
Preference number: 5 (lower is better)
Translates to: WAPGSGHCSLETPDENTQQTGEH*AAMTFS
Trigger: CGAGAAAGTCATAGCTGCCAAGTGCTCACCGGTTTG...CTGAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp GTGACCTGGCATCTTAGGGCTTTGCCACGCCAGCTTTGTGATGCCTCCCACCAGTGGCATCTTAGGGCTTaGCCACGCCAGCTTTGTGAT +
Preference number: 5 (lower is better)
Translates to: VTWHLRALPRQLCDASHQWHLRA*PRQLCD
Trigger: ATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCA...CTGGTGGGAGGCATCACAAAGCTGGCGTGGCAAAGCCCTAAGATGCCAGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GCCGGCAGTTTGGGTGTGGGAGGAGCCTCCAAAGTCAAAGCAGGCAGATGCCCCTGGTATCAAGATTTATaGGCCCAAGCGGTGACGACA +
Preference number: 5 (lower is better)
Translates to: AGSLGVGGASKVKAGRCPWYQDL*AQAVTT
Trigger: TGTCGTCACCGCTTGGGCCAATAAATCTTGATACCA...GGGGCATCTGCCTGCTTTGACTTTGGAGGCTCCTCCCACACCCAAACTGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 90 bp ATCTGCCCCTTCACTCAAAGAGGTCCACGAAGGAAAGACCAGCAGTaGGTCCGAGTCACCGGCAGAAGAGATTTGCAGCGGGAACACCAC +
Preference number: 5 (lower is better)
Translates to: ICPFTQRGPRRKDQQ*VRVTGRRDLQREHH
Trigger: GTGGTGTTCCCGCTGCAAATCTCTTCTGCCGGTGACTCGGACTCACTGCTGGTCTTTCCTTCGTGGACCTCTTTGAGTGAAGGGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 90 bp CAGCATCCCGGGTTCCCTCCTGGTAGCCAGAAGTCTCTCCTCCTTTaGCGAAATCTGCCCCTTCACTCAAAGAGGTCCACGAAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: QHPGFPPGSQKSLLL*RNLPLHSKRSTKER
Trigger: TCTTTCCTTCGTGGACCTCTTTGAGTGAAGGGGCAGATTTCGGCAAAGGAGGAGAGACTTCTGGCTACCAGGAGGGAACCCGGGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTGCCTGGGCCCGGATCTaGTCTCTCAGCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: NWEHGAGTHSPLDPNICIAWARI*SLSCSS
Trigger: GCTGGAGCAGCTGAGAGACAAGATCCGGGCCCAGGC...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTGAATGCCAAAGCCGTAGCCAGCCTGCCTTaGGGCTTTGCTCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GGTLDYHLARSIYLNAKAVASLP*GFAPAL
Trigger: CAGCGCCGGAGCAAAGCCCAAAGGCAGGCTGGCTAC...GGCTTTGGCATTCAGATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 90 bp TCTGTGCAGCCCCGGGCAGGCTGTGGAAACTCTGTGAACCTCGGTTaGCTCATCTACAAAATGGGAGCAAGACTGCCAACCTTCGTCTTT +
Preference number: 5 (lower is better)
Translates to: SVQPRAGCGNSVNLG*LIYKMGARLPTFVF
Trigger: AAAGACGAAGGTTGGCAGTCTTGCTCCCATTTTGTAGATGAGGCAACCGAGGTTCACAGAGTTTCCACAGCCTGCCCGGGGCTGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS-3UTR CAA 90 bp CGGCCTCATCCCCTGCTGCAGAACTGCATCTACCCAACTGGTCGTCAACGCTTCGGGGTCTTCTCTCTTTaGCAAGAACTGCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: RPHPLLQNCIYPTGRQRFGVFSL*QELLLT
Trigger: GGTCAAAAGCAGTTCTTGCAAAAGAGAGAAGACCCC...GAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTCCTGCAGCCTCCGCTTaGATGGCCCGAGCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFPAASA*MARALA
Trigger: GGCAAGAGCTCGGGCCATCAAAGCGGAGGCTGCAGG...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp ATACAGCAGGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCCAGCTCACAATGACATaGTGGACGCCTGTGCACCTC +
Preference number: 5 (lower is better)
Translates to: IQQETLKGRNLGLPSCPVQLTMT*WTPVHL
Trigger: GAGGTGCACAGGCGTCCACAATGTCATTGTGAGCTG...GACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCCTGCTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAATGACCTTGGGCCCTaGAGCCGTGGCTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: PVNISECQSPPLCICPVGNDLGP*SRGFLW
Trigger: CCAGAGGAAGCCACGGCTCAAGGGCCCAAGGTCATT...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CTTGGGCACCAGGCAGTGGGCACTGCTCGTTGGAAACCCCGGATGAAAACACTCCTGCTTTTGACCCTTTaGGGTTTTTCCCTCAGAACA +
Preference number: 5 (lower is better)
Translates to: LGHQAVGTARWKPRMKTLLLLTL*GFSLRT
Trigger: TGTTCTGAGGGAAAAACCCAAAAGGGTCAAAAGCAG...GAGTGTTTTCATCCGGGGTTTCCAACGAGCAGTGCCCACTGCCTGGTGCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000624277.3
CDS-3UTR CAA 90 bp GGAGACCTTGAAGGGGAGGAACCTTGGATTACCATCTTGCCCGGTCAATATATCTACGGGAGTTTGCTCTaGGTGGATGGGCTCGGGTCA +
Preference number: 5 (lower is better)
Translates to: GDLEGEEPWITILPGQYIYGSLL*VDGLGS
Trigger: TGACCCGAGCCCATCCACCAAGAGCAAACTCCCGTA...GATATATTGACCGGGCAAGATGGTAATCCAAGGTTCCTCCCCTTCAAGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CCACATCCTGGAAGGATCAGTGCTGGGACACAGATGTCCCTAAGGCCAACACGCCTGCTTTTGACCCTTTaGGGTTTTTCCCTCAGAACA +
Preference number: 5 (lower is better)
Translates to: PHPGRISAGTQMSLRPTRLLLTL*GFSLRT
Trigger: TGTTCTGAGGGAAAAACCCAAAAGGGTCAAAAGCAG...GCGTGTTGGCCTTAGGGACATCTGTGTCCCAGCACTGATCCTTCCAGGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGCTTGGCAGGGCATGCTaGGCAGCCGAGACGGGGGAG +
Preference number: 5 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMLGRAC*AAETGE
Trigger: CTCCCCCGTCTCGGCTGCCAAGCATGCCCTGCCAAG...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp AATTGGGAGCATGGAGCAGGAACACATTCCCCACTGGATCCAAACATCTGCATTCTATCGACCCGCTGCTaGAGGACTTTGGCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: NWEHGAGTHSPLDPNICILSTRC*RTLAVV
Trigger: GACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATAG...AATGCAGATGTTTGGATCCAGTGGGGAATGTGTTCCTGCTCCATGCTCCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGTTACCCAGCATTTCTTaGGGGTCTTGGCCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PVNISECQSPPLCICPVGLPSIS*GSWPLV
Trigger: CACCAGGGGCCAAGACCCCAAAGAAATGCTGGGTAA...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp CCGGTCAATATATCTGAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGCGCCTCTTCGTGGCTTaGATGCGAAGAAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: PVNISECQSPPLCICPVGRLFVA*MRRSRC
Trigger: ACACCTGCTTCTTCGCATCAAAGCCACGAAGAGGCG...CCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTCAGATATATTGACCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAACTGCAACGCCTTTTCTaGGACGCCTCTTCGTGGCTT +
Preference number: 5 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQLQRLF*DASSWL
Trigger: AAGCCACGAAGAGGCGTCCAAGAAAAGGCGTTGCAG...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCTCCTCCTCCCAAACTTaGCTGGAGGCCTCTGACAGC +
Preference number: 5 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSSSSQT*LEASDS
Trigger: GCTGTCAGAGGCCTCCAGCAAAGTTTGGGAGGAGGA...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCACCGGCAGAAGAGATTaGCAGCGGGAACACCACACC +
Preference number: 5 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSTGRRD*QREHHT
Trigger: GGTGTGGTGTTCCCGCTGCAAATCTCTTCTGCCGGT...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp AGGCCAACACGCTGCTCATCAACTCCGCATTCAAGAAGAGACCCTCAGATTCAAGAAGTCTCTCCTCCTTaGCCGAAATCTGCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: RPTRCSSTPHSRRDPQIQEVSPP*PKSAPS
Trigger: TGAAGGGGCAGATTTCGGCAAAGGAGGAGAGACTTC...TTGAATCTGAGGGTCTCTTCTTGAATGCGGAGTTGATGAGCAGCGTGTTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCCAATCTGCTGAGGGCTaGCTGCTGCTTCTCAACCAG +
Preference number: 5 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSQSAEG*LLLLNQ
Trigger: CTGGTTGAGAAGCAGCAGCAAGCCCTCAGCAGATTG...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp GAATGCCAAAGCCCTCCGCTCTGTATATGTCCTGTTGGGAGATTAAATGCGTTTGCATCCGAGCATGGGTaGGTGTCTTCACCATCACTC +
Preference number: 5 (lower is better)
Translates to: ECQSPPLCICPVGRLNAFASEHG*VSSPSL
Trigger: GAGTGATGGTGAAGACACCAACCCATGCTCGGATGC...AAACGCATTTAATCTCCCAACAGGACATATACAGAGCGGAGGGCTTTGGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCCAAACCGGTGAGCACTaGGCAGCTATGACTTTCTCG +
Preference number: 5 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLQTGEH*AAMTFS
Trigger: CGAGAAAGTCATAGCTGCCAAGTGCTCACCGGTTTG...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp TGTCCTGTTGGGAGATTAAATGCGTTTACACCTCTGCTGAAGCGGCTTTTTCTCTCCTCGTTCCTGCTCTaGGCGACTCTGACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: CPVGRLNAFTPLLKRLFLSSFLL*ATLTVL
Trigger: AAGAACAGTCAGAGTCGCCAAGAGCAGGAACGAGGA...GAGAAAAAGCCGCTTCAGCAGAGGTGTAAACGCATTTAATCTCCCAACAGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp ATTCAAGAAGAGACCCTCAGATTCAAAAGGGTCCCAGAGAAATTACAGGGGTCCAAATCACAGACTAATTaGTTCAGAAGACTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: IQEETLRFKRVPEKLQGSKSQTN*FRRLEG
Trigger: CCCTTCTAGTCTTCTGAACAAATTAGTCTGTGATTT...GGACCCCTGTAATTTCTCTGGGACCCTTTTGAATCTGAGGGTCTCTTCTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS-3UTR CAA 90 bp ATCAATGAGAAAGCTGTAGCTCAGCTCAAAGTTTGTTCTGAAATTGGGAGCATGTTGCAAGAACTGCTTTaGACCCTTTTGGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: INEKAVAQLKVCSEIGSMLQELL*TLLGFS
Trigger: GGAAAAACCCAAAAGGGTCAAAAGCAGTTCTTGCAA...CATGCTCCCAATTTCAGAACAAACTTTGAGCTGAGCTACAGCTTTCTCATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp AAGGAGGAGCCACGCAGGGGGCCGGCCCTGCGGCCCTaGGGCCTCTGCCAGGTCACCCATCCTCCACCCCCA +
Preference number: 6 (lower is better)
Translates to: KEEPRRGPALRP*GLCQVTHPPPP
Trigger: TGGGGGTGGAGGATGGGTGACCTGGCAGAGGCCCCAGGGCCGCAGGGCCGGCCCCCTGCGTGGCTCCTCCTT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 72 bp GCGTGCCCACGACCAGGGTCGGCATGGCCGCGGGGCTaGGGGGAGAGCAGGTGCAAGGTCAACCTGGCCCGC +
Preference number: 6 (lower is better)
Translates to: ACPRPGSAWPRG*GESRCKVNLAR
Trigger: GCGGGCCAGGTTGACCTTGCACCTGCTCTCCCCTCAGCCCCGCGGCCATGCCGACCCTGGTCGTGGGCACGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS CAA 90 bp GCCCCAGGTGCACACGGCTGGGCTTCCAGGTTAGGAGCACCGGCCTaGGGCTGGACGGGTGGGAGGCTCTGCCTCTGTGCAGCCCCGGGC +
Preference number: 6 (lower is better)
Translates to: APGAHGWASRLGAPA*GWTGGRLCLCAAPG
Trigger: GCCCGGGGCTGCACAGAGGCAGAGCCTCCCACCCGTCCAGCCCAAGGCCGGTGCTCCTAACCTGGAAGCCCAGCCGTGTGCACCTGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS TCA 72 bp GGGCCTGCCGCCGCCGGGCCTGCGCCTTCTGGCGCATaGACTCCCGCAAGGACTCAGAGCTGTGCGAGGGTC +
Preference number: 6 (lower is better)
Translates to: GPAAAGPAPSGA*TPARTQSCARV
Trigger: GACCCTCGCACAGCTCTGAGTCCTTGCGGGAGTTCATGCGCCAGAAGGCGCAGGCCCGGCGGCGGCAGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp GATGGGCTGGCCACTGCCTGGCTCCGGATGCCCGCCTaGGCCGGTCCCCTGGCCCACGATGGAAACCCTCAG +
Preference number: 6 (lower is better)
Translates to: DGLATAWLRMPA*AGPLAHDGNPQ
Trigger: CTGAGGGTTTCCATCGTGGGCCAGGGGACCGGCGCAGGCGGGCATCCGGAGCCAGGCAGTGGCCAGCCCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp CAGTGGGAGGGCGCGTGGCCTTTGAGCTTGCGGGGCTaGTCTGGGGGCGATGGCTGGTGGAGCTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: QWEGAWPLSLRG*SGGDGWWSCWA
Trigger: GGCCCAGCAGCTCCACCAGCCATCGCCCCCAGAGCAGCCCCGCAAGCTCAAAGGCCACGCGCCCTCCCACTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp GCTCGTGCGCTGGGACGACGTCCGTGGGCCCCGGGATaGGGAGGATGTCCACAGGCCCCGGCATGGAGACGA +
Preference number: 6 (lower is better)
Translates to: ARALGRRPWAPG*GGCPQAPAWRR
Trigger: TCGTCTCCATGCCGGGGCCTGTGGACATCCTCCCCATCCCGGGGCCCACGGACGTCGTCCCAGCGCACGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp CTGCTGCAGCTTGGCCTGGGCCTGCAGCTCGTGCGCTaGGACGACGTCCGTGGGCCCCGGGATGGGGAGGAT +
Preference number: 6 (lower is better)
Translates to: LLQLGLGLQLVR*DDVRGPRDGED
Trigger: ATCCTCCCCATCCCGGGGCCCACGGACGTCGTCCCAGCGCACGAGCTGCAGGCCCAGGCCAAGCTGCAGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp GAGGCCTTCTCCTCCAGGGCCTGCCGCCGCCGGGCCTaGGCCTTCTGGCGCATGAACTCCCGCAAGGACTCA +
Preference number: 6 (lower is better)
Translates to: EAFSSRACRRRA*AFWRMNSRKDS
Trigger: TGAGTCCTTGCGGGAGTTCATGCGCCAGAAGGCGCAGGCCCGGCGGCGGCAGGCCCTGGAGGAGAAGGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp GGAGCACCGGCCTTGGGCTGGACGGGTGGGAGGCTCTaGCTCTGTGCAGCCCCGGGCAGGCTGTGGAAACTC +
Preference number: 6 (lower is better)
Translates to: GAPALGWTGGRL*LCAAPGRLWKL
Trigger: GAGTTTCCACAGCCTGCCCGGGGCTGCACAGAGGCAGAGCCTCCCACCCGTCCAGCCCAAGGCCGGTGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 72 bp GGTGGCCTCGACAAGCTGCCCAGGCGTGGCCCCAGGTaGACACGGCTGGGCTTCCAGGTTAGGAGCACCGGC +
Preference number: 6 (lower is better)
Translates to: GGLDKLPRRGPR*TRLGFQVRSTG
Trigger: GCCGGTGCTCCTAACCTGGAAGCCCAGCCGTGTGCACCTGGGGCCACGCCTGGGCAGCTTGTCGAGGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 72 bp GTGCCCAGGGACGCACAGCTCCCCTGCTGCCACGCCTaGGCCCGGATCTTGTCTCTCAGCTGCTCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: VPRDAQLPCCHA*ARILSLSCSSR
Trigger: GCGGCTGGAGCAGCTGAGAGACAAGATCCGGGCCCAGGCGTGGCAGCAGGGGAGCTGTGCGTCCCTGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp GGCTGGGCTTCCAGGTTAGGAGCACCGGCCTTGGGCTaGACGGGTGGGAGGCTCTGCCTCTGTGCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: GWASRLGAPALG*TGGRLCLCAAP
Trigger: CGGGGCTGCACAGAGGCAGAGCCTCCCACCCGTCCAGCCCAAGGCCGGTGCTCCTAACCTGGAAGCCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 72 bp TGCTCCAGCCAGGCCAGCTCCGCGAGCGTTTTCTCCTaGAGCGCCATCTCTCGCAGGCGCAGCAGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: CSSQASSASVFS*SAISRRRSSAA
Trigger: GGCCGCGCTGCTGCGCCTGCGAGAGATGGCGCTCCAGGAGAAAACGCTCGCGGAGCTGGCCTGGCTGGAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp CCTGCTGCTCAGTGGGAGGGCGCGTGGCCTTTGAGCTaGCGGGGCTGCTCTGGGGGCGATGGCTGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: PAAQWEGAWPLS*RGCSGGDGWWS
Trigger: GCTCCACCAGCCATCGCCCCCAGAGCAGCCCCGCAAGCTCAAAGGCCACGCGCCCTCCCACTGAGCAGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 90 bp AGGCCCAGTGAGCCACCTGCAGGCAGGGAGCTCCCCGAGGCTGGCTaGGCCCCGGTACAGGGTTCTGGCAGGTCCTCCTCGCAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: RPSEPPAGRELPEAG*APVQGSGRSSSQSS
Trigger: GGAGGACTGCGAGGAGGACCTGCCAGAACCCTGTACCGGGGCCAAGCCAGCCTCGGGGAGCTCCCTGCCTGCAGGTGGCTCACTGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 90 bp GACCACATGGGCAGGCTGCACGCCTTCCCCCAGGGTCCTGGTTCCTaGAGGTCGTCAGACCCGACCACGTGGGGAGCTGCCCAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: DHMGRLHAFPQGPGS*RSSDPTTWGAAQGG
Trigger: CCCACCCTGGGCAGCTCCCCACGTGGTCGGGTCTGACGACCTCAAGGAACCAGGACCCTGGGGGAAGGCGTGCAGCCTGCCCATGTGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 90 bp CCCAGGGACGCACAGCTCCCCTGCTGCCACGCCTGGGCCCGGATCTaGTCTCTCAGCTGCTCCAGCCGCGCGTCACTCTTTCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: PRDAQLPCCHAWARI*SLSCSSRASLFLGL
Trigger: GAGGCCCAGAAAGAGTGACGCGCGGCTGGAGCAGCTGAGAGACAAGATCCGGGCCCAGGCGTGGCAGCAGGGGAGCTGTGCGTCCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS TCA 72 bp GCAGGCTGCACGCCTTCCCCCAGGGTCCTGGTTCCTTaGGGTCGTCAGACCCGACCACGTGGGGAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: AGCTPSPRVLVP*GRQTRPRGELP
Trigger: GGGCAGCTCCCCACGTGGTCGGGTCTGACGACCTCAAGGAACCAGGACCCTGGGGGAAGGCGTGCAGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp GGGTCGCTGCTGCCTTCACATGGCGGCTTCGAGGCCTaGAGCCCCACCTATGACCCTGCCCGGGATGGGCTG +
Preference number: 6 (lower is better)
Translates to: GSLLPSHGGFEA*SPTYDPARDGL
Trigger: CAGCCCATCCCGGGCAGGGTCATAGGTGGGGCTGCAGGCCTCGAAGCCGCCATGTGAAGGCAGCAGCGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp CTCTCGCAGTGGGCCCTCGGGCTCACACTCTGCTGTTaGTCCCAGCTGGGGCCCCACGACAGTGTCTCGCCG +
Preference number: 6 (lower is better)
Translates to: LSQWALGLTLCC*SQLGPHDSVSP
Trigger: CGGCGAGACACTGTCGTGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAGCCCGAGGGCCCACTGCGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp CAGCGGGCCCTGGGGGTCGTGTGTGTCCTCGCCCCATaGTGGCCTCGGAGGCTGCTGGTGACCATCTGCATC +
Preference number: 6 (lower is better)
Translates to: QRALGVVCVLAP*WPRRLLVTICI
Trigger: GATGCAGATGGTCACCAGCAGCCTCCGAGGCCAGCATGGGGCGAGGACACACACGACCCCCAGGGCCCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp GGGCTTGGCAACAGCCTTCCAGTCGGCTGCTCTCCCTaGGGCCCCATGGGAGAAGGGGCCCTGCCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: GLGNSLPVGCSP*GPMGEGALPLA
Trigger: AGCCAGAGGCAGGGCCCCTTCTCCCATGGGGCCCCAGGGAGAGCAGCCGACTGGAAGGCTGTTGCCAAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp TTCCAGGTTAGGAGCACCGGCCTTGGGCTGGACGGGTaGGAGGCTCTGCCTCTGTGCAGCCCCGGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: FQVRSTGLGLDG*EALPLCSPGQA
Trigger: AGCCTGCCCGGGGCTGCACAGAGGCAGAGCCTCCCACCCGTCCAGCCCAAGGCCGGTGCTCCTAACCTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 72 bp ACAAGCTGCCCAGGCGTGGCCCCAGGTGCACACGGCTaGGCTTCCAGGTTAGGAGCACCGGCCTTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: TSCPGVAPGAHG*ASRLGAPALGW
Trigger: CCAGCCCAAGGCCGGTGCTCCTAACCTGGAAGCCCAGCCGTGTGCACCTGGGGCCACGCCTGGGCAGCTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 72 bp CGGGCCCTGGGGGTCGTGTGTGTCCTCGCCCCATGCTaGCCTCGGAGGCTGCTGGTGACCATCTGCATCGGA +
Preference number: 6 (lower is better)
Translates to: RALGVVCVLAPC*PRRLLVTICIG
Trigger: TCCGATGCAGATGGTCACCAGCAGCCTCCGAGGCCAGCATGGGGCGAGGACACACACGACCCCCAGGGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp GGGCAGAGCCCCAACTACTGGGTTCCCGCCGACCCCTaGGGCCCAGGAAACAGTCCCTCCGGCAGACTCTCC +
Preference number: 6 (lower is better)
Translates to: GQSPNYWVPADP*GPGNSPSGRLS
Trigger: GGAGAGTCTGCCGGAGGGACTGTTTCCTGGGCCCCAGGGGTCGGCGGGAACCCAGTAGTTGGGGCTCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp CTGGTCGTCAACGCTTCCACCCGGACCAGCCACCCCTaGGCAGAGCCCCAACTACTGGGTTCCCGCCGACCC +
Preference number: 6 (lower is better)
Translates to: LVVNASTRTSHP*AEPQLLGSRRP
Trigger: GGGTCGGCGGGAACCCAGTAGTTGGGGCTCTGCCCAGGGGTGGCTGGTCCGGGTGGAAGCGTTGACGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp GGCAGGCTGCACGCCTTCCCCCAGGGTCCTGGTTCCTaGAGGTCGTCAGACCCGACCACGTGGGGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: GRLHAFPQGPGS*RSSDPTTWGAA
Trigger: GGCAGCTCCCCACGTGGTCGGGTCTGACGACCTCAAGGAACCAGGACCCTGGGGGAAGGCGTGCAGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 72 bp GCTCTCGCAGTGGGCCCTCGGGCTCACACTCTGCTGTaGCTCCCAGCTGGGGCCCCACGACAGTGTCTCGCC +
Preference number: 6 (lower is better)
Translates to: ALAVGPRAHTLL*LPAGAPRQCLA
Trigger: GGCGAGACACTGTCGTGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAGCCCGAGGGCCCACTGCGAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS TCA 72 bp CCCCTGGCCCACGATGGAAACCCTCAGGTGGGTCATTaGAACTGGGCTGGCACGGTGGGCAGCCCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: PLAHDGNPQVGH*NWAGTVGSPAL
Trigger: CAGGGCCGGGCTGCCCACCGTGCCAGCCCAGTTTCAATGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp AGGGGAGAGCAGGTGCAAGGTCAACCTGGCCCGCCCTaGCTGGGGTCGCTGCTGCCTTCACATGGCGGCTTC +
Preference number: 6 (lower is better)
Translates to: RGEQVQGQPGPP*LGSLLPSHGGF
Trigger: GAAGCCGCCATGTGAAGGCAGCAGCGACCCCAGGCAGGGCGGGCCAGGTTGACCTTGCACCTGCTCTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp CCCGGGCCACCTCAGGGCTGCCACGTCATCCTCAGCTaGAGGTGCGCAGAGCCTGGGCTTGGCAACAGCCTT +
Preference number: 6 (lower is better)
Translates to: PGPPQGCHVILS*RCAEPGLGNSL
Trigger: AAGGCTGTTGCCAAGCCCAGGCTCTGCGCACCTGCAGCTGAGGATGACGTGGCAGCCCTGAGGTGGCCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp GCTGGGTCCCTGACGGTGTCCAGCGCTTCGGCACCCTaGAGCTTGGCGGTGAGGCTATCGACCCGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: AGSLTVSSASAP*SLAVRLSTRCL
Trigger: CAAGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGGGTGCCGAAGCGCTGGACACCGTCAGGGACCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp GGCTTGCTCTCGCAGTGGGCCCTCGGGCTCACACTCTaGTGTTGCTCCCAGCTGGGGCCCCACGACAGTGTC +
Preference number: 6 (lower is better)
Translates to: GLLSQWALGLTL*CCSQLGPHDSV
Trigger: GACACTGTCGTGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAGCCCGAGGGCCCACTGCGAGAGCAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp TCTGGGTGCCCGGGTCCCTACATCGCAGTCCCCTTCTaGTCGGCCTCTGGCCCCGCTGAATGCACACGGTGG +
Preference number: 6 (lower is better)
Translates to: SGCPGPYIAVPF*SASGPAECTRW
Trigger: CCACCGTGTGCATTCAGCGGGGCCAGAGGCCGAGCAGAAGGGGACTGCGATGTAGGGACCCGGGCACCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 72 bp GCGCCGGTCCCCTGGCCCACGATGGAAACCCTCAGGTaGGTCATTGAAACTGGGCTGGCACGGTGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: APVPWPTMETLR*VIETGLARWAA
Trigger: GGCTGCCCACCGTGCCAGCCCAGTTTCAATGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGGACCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp CCGGATGCCCGCCTGCGCCGGTCCCCTGGCCCACGATaGAAACCCTCAGGTGGGTCATTGAAACTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PDARLRRSPGPR*KPSGGSLKLGW
Trigger: CCAGCCCAGTTTCAATGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGGACCGGCGCAGGCGGGCATCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp CTGCCTGGCTCCGGATGCCCGCCTGCGCCGGTCCCCTaGCCCACGATGGAAACCCTCAGGTGGGTCATTGAA +
Preference number: 6 (lower is better)
Translates to: LPGSGCPPAPVP*PTMETLRWVIE
Trigger: TTCAATGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGGACCGGCGCAGGCGGGCATCCGGAGCCAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp GAGAGCAGGTGCAAGGTCAACCTGGCCCGCCCTGCCTaGGGTCGCTGCTGCCTTCACATGGCGGCTTCGAGG +
Preference number: 6 (lower is better)
Translates to: ESRCKVNLARPA*GRCCLHMAASR
Trigger: CCTCGAAGCCGCCATGTGAAGGCAGCAGCGACCCCAGGCAGGGCGGGCCAGGTTGACCTTGCACCTGCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp TCCCGGAGGCTTCCAGGCCCCCGGACTGTGCAGAACTaGGGACAAAGGTCACGATGCCAGGGGTGGTCCGGG +
Preference number: 6 (lower is better)
Translates to: SRRLPGPRTVQN*GQRSRCQGWSG
Trigger: CCCGGACCACCCCTGGCATCGTGACCTTTGTCCCCAGTTCTGCACAGTCCGGGGGCCTGGAAGCCTCCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp GGGCCCTCGGGCTCACACTCTGCTGTTGCTCCCAGCTaGGGCCCCACGACAGTGTCTCGCCGTCCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: GPSGSHSAVAPS*GPTTVSRRPGS
Trigger: ACTTCCTGGACGGCGAGACACTGTCGTGGGGCCCCAGCTGGGAGCAACAGCAGAGTGTGAGCCCGAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp GAGCCCGGGGCTTCCCTGCTAAGGAAGGGCCGGGCTTaGTCTGAGGGTCTCCTGGGGGTGGCTCCTTCACCT +
Preference number: 6 (lower is better)
Translates to: EPGASLLRKGRA*SEGLLGVAPSP
Trigger: AGGTGAAGGAGCCACCCCCAGGAGACCCTCAGACCAAGCCCGGCCCTTCCTTAGCAGGGAAGCCCCGGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp AGCGGGAACACCACACCGGCGGCCTCAGGGGGTGCCTaGAGGGCTTCTCCTGTGTCTGACACCCCCATCAGG +
Preference number: 6 (lower is better)
Translates to: SGNTTPAASGGA*RASPVSDTPIR
Trigger: CCTGATGGGGGTGTCAGACACAGGAGAAGCCCTCCAGGCACCCCCTGAGGCCGCCGGTGTGGTGTTCCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp GCACACGGCTGGGCTTCCAGGTTAGGAGCACCGGCCTaGGGCTGGACGGGTGGGAGGCTCTGCCTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: AHGWASRLGAPA*GWTGGRLCLCA
Trigger: TGCACAGAGGCAGAGCCTCCCACCCGTCCAGCCCAAGGCCGGTGCTCCTAACCTGGAAGCCCAGCCGTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CAA 90 bp CCCATGCTGGCCTCGGAGGCTGCTGGTGACCATCTGCATCGGAGGTaGTCTGGGGTGGCGTCACATCCTGCTGCTCAGTGGGAGGGCGCG +
Preference number: 6 (lower is better)
Translates to: PMLASEAAGDHLHRR*SGVASHPAAQWEGA
Trigger: CGCGCCCTCCCACTGAGCAGCAGGATGTGACGCCACCCCAGACAACCTCCGATGCAGATGGTCACCAGCAGCCTCCGAGGCCAGCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp TGCTGCCACGCCTGGGCCCGGATCTTGTCTCTCAGCTaGTCCAGCCGCGCGTCACTCTTTCTGGGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: CCHAWARILSLS*SSRASLFLGLC
Trigger: GCAGAGGCCCAGAAAGAGTGACGCGCGGCTGGAGCAGCTGAGAGACAAGATCCGGGCCCAGGCGTGGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp CCAGAGGCGGGTGTGACCTGGGTGTGGCCATCCCTGTaGTCTGAGAGGCTGTGGTCGGCTCTCGGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: PEAGVTWVWPSL*SERLWSALGPC
Trigger: GCAAGGACCGAGAGCCGACCACAGCCTCTCAGAGCACAGGGATGGCCACACCCAGGTCACACCCGCCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp GGGCCTCCCTGTGGATGGAGGACGGGAGGTCGGCACTaGCGTAGGACAGCAACTCGTCCACGGGAGACAGGA +
Preference number: 6 (lower is better)
Translates to: GPPCGWRTGGRH*RRTATRPRETG
Trigger: TCCTGTCTCCCGTGGACGAGTTGCTGTCCTACGGCAGTGCCGACCTCCCGTCCTCCATCCACAGGGAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp TGCTCCAGCCGCGCGTCACTCTTTCTGGGCCTCTGCTaGGGCCCCAACACCTGGGGTGGCCTCTCCTTCCAA +
Preference number: 6 (lower is better)
Translates to: CSSRASLFLGLC*GPNTWGGLSFQ
Trigger: TTGGAAGGAGAGGCCACCCCAGGTGTTGGGGCCCCAGCAGAGGCCCAGAAAGAGTGACGCGCGGCTGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp TGCTGGGAGACCCTGGAGAGCTCGCGCCCCTGGCCGTaGGATGCCTTGGCTTCAACTCTGCGCTCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: CWETLESSRPWP*DALASTLRSAA
Trigger: TGCAGCTGAGCGCAGAGTTGAAGCCAAGGCATCCCACGGCCAGGGGCGCGAGCTCTCCAGGGTCTCCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp CAGCAACGGTGGGGCCCAGAGGCCAAGAGCCGTGACTaGCCCAGACATGCGGCTGTCTCTGAGGCCGGTGAT +
Preference number: 6 (lower is better)
Translates to: QQRWGPEAKSRD*PRHAAVSEAGD
Trigger: ATCACCGGCCTCAGAGACAGCCGCATGTCTGGGCCAGTCACGGCTCTTGGCCTCTGGGCCCCACCGTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569961.5
CDS CCA 72 bp GGGTTGTCCGGAGGGAAGAACTTGGCCAGGGGAAGCTaGGAGAGGGCTCCGTCAGGGCCCTCCACCTCTGCA +
Preference number: 6 (lower is better)
Translates to: GLSGGKNLARGS*ERAPSGPSTSA
Trigger: TGCAGAGGTGGAGGGCCCTGACGGAGCCCTCTCCCAGCTTCCCCTGGCCAAGTTCTTCCCTCCGGACAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp TTGACTTTGGGGCTGGAACCCTGCTGCAGCTTGGCCTaGGCCTGCAGCTCGTGCGCTGGGACGACGTCCGTG +
Preference number: 6 (lower is better)
Translates to: LTLGLEPCCSLA*ACSSCAGTTSV
Trigger: CACGGACGTCGTCCCAGCGCACGAGCTGCAGGCCCAGGCCAAGCTGCAGCAGGGTTCCAGCCCCAAAGTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp CCTTTGGGCTTTGCTCCGGCGCTGAAACTTCTGCCATaGCCGTGTCCAAGGAGGAGCCACGCAGGGGGCCGG +
Preference number: 6 (lower is better)
Translates to: PLGFAPALKLLP*PCPRRSHAGGR
Trigger: CCGGCCCCCTGCGTGGCTCCTCCTTGGACACGGCCATGGCAGAAGTTTCAGCGCCGGAGCAAAGCCCAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp TCCCCTGGCCCACGATGGAAACCCTCAGGTGGGTCATaGAAACTGGGCTGGCACGGTGGGCAGCCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: SPGPRWKPSGGS*KLGWHGGQPGP
Trigger: AGGGCCGGGCTGCCCACCGTGCCAGCCCAGTTTCAATGACCCACCTGAGGGTTTCCATCGTGGGCCAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000624277.3
ENST00000638797.2
CDS CAA 72 bp GCACAGCTCCCCTGCTGCCACGCCTGGGCCCGGATCTaGTCTCTCAGCTGCTCCAGCCGCGCGTCACTCTTT +
Preference number: 6 (lower is better)
Translates to: AQLPCCHAWARI*SLSCSSRASLF
Trigger: AAAGAGTGACGCGCGGCTGGAGCAGCTGAGAGACAAGATCCGGGCCCAGGCGTGGCAGCAGGGGAGCTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 72 bp AAGTCCACGGTGAGAGCCGGGTCTCTCGAGGGATCCTaGCTATGGTGCCTGCGGAGGACGGGAGGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: KSTVRAGSLEGS*LWCLRRTGGGP
Trigger: TGGGCCCCCTCCCGTCCTCCGCAGGCACCATAGCAAGGATCCCTCGAGAGACCCGGCTCTCACCGTGGACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 72 bp CTTGTCTCTGAGCCTCCCTCCCAGGCGGCCTTGACTTaGGGGCTGGAACCCTGCTGCAGCTTGGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LVSEPPSQAALT*GLEPCCSLAWA
Trigger: GGCCCAGGCCAAGCTGCAGCAGGGTTCCAGCCCCAAAGTCAAGGCCGCCTGGGAGGGAGGCTCAGAGACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 90 bp CTGTCTCCTAAGTCCACGGTGAGAGCCGGGTCTCTCGAGGGATCCTaGCTATGGTGCCTGCGGAGGACGGGAGGGGGCCCAAGCAGCGAC +
Preference number: 6 (lower is better)
Translates to: LSPKSTVRAGSLEGS*LWCLRRTGGGPSSD
Trigger: GTCGCTGCTTGGGCCCCCTCCCGTCCTCCGCAGGCACCATAGCAAGGATCCCTCGAGAGACCCGGCTCTCACCGTGGACTTAGGAGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 90 bp GCTTCGGCACCCTGCAGCTTGGCGGTGAGGCTATCGACCCGCTGCTaGAGGACTTTGGCTGTGGTCTCTAGCGCCTGCAGCTGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: ASAPCSLAVRLSTRC*RTLAVVSSACSCAC
Trigger: GCAGGCGCAGCTGCAGGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGGGTGCCGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 90 bp TGCAGGGTCACCGGGGTCTCGGGCTCTGGCATGAGGTACGGGAGTTaGCTCTTGGTGGATGGGCTCGGGTCAGCATCCCGGGTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: CRVTGVSGSGMRYGS*LLVDGLGSASRVPS
Trigger: GGAGGGAACCCGGGATGCTGACCCGAGCCCATCCACCAAGAGCAAACTCCCGTACCTCATGCCAGAGCCCGAGACCCCGGTGACCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 72 bp GAGCCTGCAGGGTCACCGGGGTCTCGGGCTCTGGCATaGGGTACGGGAGTTTGCTCTTGGTGGATGGGCTCG +
Preference number: 6 (lower is better)
Translates to: EPAGSPGSRALA*GTGVCSWWMGS
Trigger: CGAGCCCATCCACCAAGAGCAAACTCCCGTACCTCATGCCAGAGCCCGAGACCCCGGTGACCCTGCAGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp GGAGACCCTGGAGAGCTCGCGCCCCTGGCCGTGGGATaGCTTGGCTTCAACTCTGCGCTCAGCTGCACTCAA +
Preference number: 6 (lower is better)
Translates to: GDPGELAPLAVG*LGFNSALSCTQ
Trigger: TTGAGTGCAGCTGAGCGCAGAGTTGAAGCCAAGGCATCCCACGGCCAGGGGCGCGAGCTCTCCAGGGTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563590.2
ENST00000565954.1
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp GCATCGGAGGTTGTCTGGGGTGGCGTCACATCCTGCTaGTCAGTGGGAGGGCGCGTGGCCTTTGAGCTTGCG +
Preference number: 6 (lower is better)
Translates to: ASEVVWGGVTSC*SVGGRVAFELA
Trigger: CGCAAGCTCAAAGGCCACGCGCCCTCCCACTGAGCAGCAGGATGTGACGCCACCCCAGACAACCTCCGATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp GCCCCATGCTGGCCTCGGAGGCTGCTGGTGACCATCTaGATCGGAGGTTGTCTGGGGTGGCGTCACATCCTG +
Preference number: 6 (lower is better)
Translates to: APCWPRRLLVTI*IGGCLGWRHIL
Trigger: CAGGATGTGACGCCACCCCAGACAACCTCCGATGCAGATGGTCACCAGCAGCCTCCGAGGCCAGCATGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp CTCCAGGGCCTCTGGGAGAAGTGGCCCAACCTCTCATaGGGACTCTCCGGCCTCTGGAAGGAGCGGTCCTGT +
Preference number: 6 (lower is better)
Translates to: LQGLWEKWPNLS*GLSGLWKERSC
Trigger: ACAGGACCGCTCCTTCCAGAGGCCGGAGAGTCCCCATGAGAGGTTGGGCCACTTCTCCCAGAGGCCCTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp TCTCCTTCCCAAGTGGGTTCTGAGGGAAGCTCCCGGTaGGCCTTGGCAGGGCATGCTTGGCAGCCGAGACGG +
Preference number: 6 (lower is better)
Translates to: SPSQVGSEGSSR*ALAGHAWQPRR
Trigger: CCGTCTCGGCTGCCAAGCATGCCCTGCCAAGGCCCACCGGGAGCTTCCCTCAGAACCCACTTGGGAAGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp CCAGGTAGATGCACATCCCCCGGGGTAGGTAGCGGGTaGTCAGGTCCTGGAGCTCCAGGGATCCCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: PGRCTSPGVGSG*SGPGAPGIPER
Trigger: CCTCTCTGGGATCCCTGGAGCTCCAGGACCTGACCACCCGCTACCTACCCCGGGGGATGTGCATCTACCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp CAGGAGCGTCGGCTGCGTTCCCTGAAGCTCCCCACATaGCTGTCTGTTGGAGCCCGGGGCTTCCCTGCTAAG +
Preference number: 6 (lower is better)
Translates to: QERRLRSLKLPT*LSVGARGFPAK
Trigger: CTTAGCAGGGAAGCCCCGGGCTCCAACAGACAGCCATGTGGGGAGCTTCAGGGAACGCAGCCGACGCTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp TCCCTGACGGTGTCCAGCGCTTCGGCACCCTGCAGCTaGGCGGTGAGGCTATCGACCCGCTGCTTGAGGACT +
Preference number: 6 (lower is better)
Translates to: SLTVSSASAPCS*AVRLSTRCLRT
Trigger: AGTCCTCAAGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGGGTGCCGAAGCGCTGGACACCGTCAGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 90 bp CCCTGCAGCTTGGCGGTGAGGCTATCGACCCGCTGCTTGAGGACTTaGGCTGTGGTCTCTAGCGCCTGCAGCTGCGCCTGCTTATGCCGG +
Preference number: 6 (lower is better)
Translates to: PCSLAVRLSTRCLRT*AVVSSACSCACLCR
Trigger: CCGGCATAAGCAGGCGCAGCTGCAGGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 90 bp ACAGCTGGGTCCCTGACGGTGTCCAGCGCTTCGGCACCCTGCAGCTaGGCGGTGAGGCTATCGACCCGCTGCTTGAGGACTTTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: TAGSLTVSSASAPCS*AVRLSTRCLRTLAV
Trigger: CACAGCCAAAGTCCTCAAGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGGGTGCCGAAGCGCTGGACACCGTCAGGGACCCAGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS TCA 72 bp ATGTCCACAGGCCCCGGCATGGAGACGACGTCCCTCTaGTGCTGCAGAAGCAGCTTCCTGTCCCGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: MSTGPGMETTSL*CCRSSFLSRCL
Trigger: CAGGCACCGGGACAGGAAGCTGCTTCTGCAGCATCAGAGGGACGTCGTCTCCATGCCGGGGCCTGTGGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp TGCCCAGGTGCTCAGCCTCCTTTGGGTCCAGGTAGATaGACATCCCCCGGGGTAGGTAGCGGGTGGTCAGGT +
Preference number: 6 (lower is better)
Translates to: CPGAQPPLGPGR*TSPGVGSGWSG
Trigger: ACCTGACCACCCGCTACCTACCCCGGGGGATGTGCATCTACCTGGACCCAAAGGAGGCTGAGCACCTGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp ACTTTGGCTGTGGTCTCTAGCGCCTGCAGCTGCGCCTaGTTATGCCGGAGGTGCAGGGAGCTGGAAGTGCCC +
Preference number: 6 (lower is better)
Translates to: TLAVVSSACSCA*LCRRCRELEVP
Trigger: GGGCACTTCCAGCTCCCTGCACCTCCGGCATAAGCAGGCGCAGCTGCAGGCGCTAGAGACCACAGCCAAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp CGCTGCTTGAGGACTTTGGCTGTGGTCTCTAGCGCCTaGAGCTGCGCCTGCTTATGCCGGAGGTGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: RCLRTLAVVSSA*SCACLCRRCRE
Trigger: CTCCCTGCACCTCCGGCATAAGCAGGCGCAGCTGCAGGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp GCACCCTGCAGCTTGGCGGTGAGGCTATCGACCCGCTaGTTGAGGACTTTGGCTGTGGTCTCTAGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: APCSLAVRLSTR*LRTLAVVSSAC
Trigger: GCAGGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS GCA 72 bp GAGCAGAGGGGCCGGCAACTGATGACACGGGACAGATaGTTAGGCACCTGGGCACGGACAGAACGCACGCCA +
Preference number: 6 (lower is better)
Translates to: EQRGRQLMTRDR*LGTWARTERTP
Trigger: TGGCGTGCGTTCTGTCCGTGCCCAGGTGCCTAAGCATCTGTCCCGTGTCATCAGTTGCCGGCCCCTCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 72 bp ACCAGCAGTGAGTCCGAGTCACCGGCAGAAGAGATTTaGAGCGGGAACACCACACCGGCGGCCTCAGGGGGT +
Preference number: 6 (lower is better)
Translates to: TSSESESPAEEI*SGNTTPAASGG
Trigger: ACCCCCTGAGGCCGCCGGTGTGGTGTTCCCGCTGCAAATCTCTTCTGCCGGTGACTCGGACTCACTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp CGGCAACTGATGACACGGGACAGATGCTTAGGCACCTaGGCACGGACAGAACGCACGCCACGCAGTGCCCCT +
Preference number: 6 (lower is better)
Translates to: RQLMTRDRCLGT*ARTERTPRSAP
Trigger: AGGGGCACTGCGTGGCGTGCGTTCTGTCCGTGCCCAGGTGCCTAAGCATCTGTCCCGTGTCATCAGTTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 72 bp GCACATCGGAGGCTGCTCCAGCTTCAACGCCTCCTCTaGCCTGGCCTGGGTCGAGTGTCTCTCCATCAGCTG +
Preference number: 6 (lower is better)
Translates to: AHRRLLQLQRLL*PGLGRVSLHQL
Trigger: CAGCTGATGGAGAGACACTCGACCCAGGCCAGGCCAGAGGAGGCGTTGAAGCTGGAGCAGCCTCCGATGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp ACCTGGGTGTGGCCATCCCTGTGCTCTGAGAGGCTGTaGTCGGCTCTCGGTCCTTGCACATCGGAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: TWVWPSLCSERL*SALGPCTSEAA
Trigger: AGCAGCCTCCGATGTGCAAGGACCGAGAGCCGACCACAGCCTCTCAGAGCACAGGGATGGCCACACCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp CTGCTGGTGACCATCTGCATCGGAGGTTGTCTGGGGTaGCGTCACATCCTGCTGCTCAGTGGGAGGGCGCGT +
Preference number: 6 (lower is better)
Translates to: LLVTICIGGCLG*RHILLLSGRAR
Trigger: ACGCGCCCTCCCACTGAGCAGCAGGATGTGACGCCACCCCAGACAACCTCCGATGCAGATGGTCACCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp AGGAGGAGCCTGCAGGGTCACCGGGGTCTCGGGCTCTaGCATGAGGTACGGGAGTTTGCTCTTGGTGGATGG +
Preference number: 6 (lower is better)
Translates to: RRSLQGHRGLGL*HEVREFALGGW
Trigger: CCATCCACCAAGAGCAAACTCCCGTACCTCATGCCAGAGCCCGAGACCCCGGTGACCCTGCAGGCTCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp TTGGCGGTGAGGCTATCGACCCGCTGCTTGAGGACTTaGGCTGTGGTCTCTAGCGCCTGCAGCTGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: LAVRLSTRCLRT*AVVSSACSCAC
Trigger: GCAGGCGCAGCTGCAGGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATAGCCTCACCGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 72 bp CCCTGCAGCTTGGCGGTGAGGCTATCGACCCGCTGCTaGAGGACTTTGGCTGTGGTCTCTAGCGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PCSLAVRLSTRC*RTLAVVSSACS
Trigger: GCTGCAGGCGCTAGAGACCACAGCCAAAGTCCTCAAGCAGCGGGTCGATAGCCTCACCGCCAAGCTGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 72 bp TTCTCAACCAGCGCGGCCAGCACAGCTCTGTCCCTCTaGCTGTCCAGGCACCCTCGTCGATGCTCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: FSTSAASTALSL*LSRHPRRCSSQ
Trigger: CTGGCTGGAGCATCGACGAGGGTGCCTGGACAGCAAGAGGGACAGAGCTGTGCTGGCCGCGCTGGTTGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp GCCTCGGAGGCTGCTGGTGACCATCTGCATCGGAGGTaGTCTGGGGTGGCGTCACATCCTGCTGCTCAGTGG +
Preference number: 6 (lower is better)
Translates to: ASEAAGDHLHRR*SGVASHPAAQW
Trigger: CCACTGAGCAGCAGGATGTGACGCCACCCCAGACAACCTCCGATGCAGATGGTCACCAGCAGCCTCCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp GTCTCGGGCTCTGGCATGAGGTACGGGAGTTTGCTCTaGGTGGATGGGCTCGGGTCAGCATCCCGGGTTCCC +
Preference number: 6 (lower is better)
Translates to: VSGSGMRYGSLL*VDGLGSASRVP
Trigger: GGGAACCCGGGATGCTGACCCGAGCCCATCCACCAAGAGCAAACTCCCGTACCTCATGCCAGAGCCCGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp TACGCATGTTTCCACGGCCTTCCGGAACCTTCTGGGTaGCCGGGTCCCTACATCGCAGTCCCCTTCTGCTCG +
Preference number: 6 (lower is better)
Translates to: YACFHGLPEPSG*PGPYIAVPFCS
Trigger: CGAGCAGAAGGGGACTGCGATGTAGGGACCCGGGCACCCAGAAGGTTCCGGAAGGCCGTGGAAACATGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 72 bp TCCAGCTCTGCCCGCTGCCGCAGGAGGGCCAACGCCTaGTTCTGCTGGTCCAGCTTCAGAGAATCCAGAAAG +
Preference number: 6 (lower is better)
Translates to: SSSARCRRRANA*FCWSSFRESRK
Trigger: CTTTCTGGATTCTCTGAAGCTGGACCAGCAGAAGCAGGCGTTGGCCCTCCTGCGGCAGCGGGCAGAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp CTGTGCTCTGAGAGGCTGTGGTCGGCTCTCGGTCCTTaGACATCGGAGGCTGCTCCAGCTTCAACGCCTCCT +
Preference number: 6 (lower is better)
Translates to: LCSERLWSALGP*TSEAAPASTPP
Trigger: AGGAGGCGTTGAAGCTGGAGCAGCCTCCGATGTGCAAGGACCGAGAGCCGACCACAGCCTCTCAGAGCACAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp TCTGCATCGGAGGTTGTCTGGGGTGGCGTCACATCCTaGTGCTCAGTGGGAGGGCGCGTGGCCTTTGAGCTT +
Preference number: 6 (lower is better)
Translates to: SASEVVWGGVTS*CSVGGRVAFEL
Trigger: AAGCTCAAAGGCCACGCGCCCTCCCACTGAGCAGCAGGATGTGACGCCACCCCAGACAACCTCCGATGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp GCCCAGCCTGGATTTGCTGGCGCAGGTCTTGTAGGATaGCCATGGCCGTCTGTATGGTCGCTGGCTGGTCGA +
Preference number: 6 (lower is better)
Translates to: AQPGFAGAGLVG*PWPSVWSLAGR
Trigger: TCGACCAGCCAGCGACCATACAGACGGCCATGGCCATCCTACAAGACCTGCGCCAGCAAATCCAGGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp TCTCTGGGTATGGGCACAGAGGCGTTTACTCTCGGCTaGAAGCTGCTGCTCTGCCTAGGAGCAGAGGGGCCG +
Preference number: 6 (lower is better)
Translates to: SLGMGTEAFTLG*KLLLCLGAEGP
Trigger: CGGCCCCTCTGCTCCTAGGCAGAGCAGCAGCTTCCAGCCGAGAGTAAACGCCTCTGTGCCCATACCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 72 bp TCCGGCAGACTCTCCTCAGACAAGGAGGACAAATCCTaGGTGGTGATGGCGGTGTCCTCCTCAAGGGGCCCC +
Preference number: 6 (lower is better)
Translates to: SGRLSSDKEDKS*VVMAVSSSRGP
Trigger: GGGGCCCCTTGAGGAGGACACCGCCATCACCACCCAGGATTTGTCCTCCTTGTCTGAGGAGAGTCTGCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 90 bp GTACAGGGTTCTGGCAGGTCCTCCTCGCAGTCCTCCTCCCAAACTTaGCTGGAGGCCTCTGACAGCTCTGACCCTGACCTTGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: VQGSGRSSSQSSSQT*LEASDSSDPDLGEG
Trigger: CCCCTCTCCAAGGTCAGGGTCAGAGCTGTCAGAGGCCTCCAGCAAAGTTTGGGAGGAGGACTGCGAGGAGGACCTGCCAGAACCCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 72 bp GGCGGAGGTGGCATCGGGCAACTGGGCACAAACCGGTaGGCACTTGGCAGCTATGACTTTCTCGCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: GGGGIGQLGTNR*ALGSYDFLAVS
Trigger: GGAGACAGCGAGAAAGTCATAGCTGCCAAGTGCTCACCGGTTTGTGCCCAGTTGCCCGATGCCACCTCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS TCA 72 bp CCGAGGAGTGTCGGGCAGAGAGCTCTCCAGGCCAGCTaGAACCTTCGTCTGGGGAGTCTTCAGCTTCCAAGC +
Preference number: 6 (lower is better)
Translates to: PRSVGQRALQAS*NLRLGSLQLPS
Trigger: GCTTGGAAGCTGAAGACTCCCCAGACGAAGGTTTCAGCTGGCCTGGAGAGCTCTCTGCCCGACACTCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp AGCCAATCTCAGGCGTTCACTCCACCTGGGGGCTCTTaGTGGTGTCTCCAAAACGCTGTGGTTCGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: SQSQAFTPPGGS*WCLQNAVVRWP
Trigger: GGGCCACCGAACCACAGCGTTTTGGAGACACCAGCAAGAGCCCCCAGGTGGAGTGAACGCCTGAGATTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 72 bp ACAGAGGCGTTTACTCTCGGCTGGAAGCTGCTGCTCTaGCTAGGAGCAGAGGGGCCGGCAACTGATGACACG +
Preference number: 6 (lower is better)
Translates to: TEAFTLGWKLLL*LGAEGPATDDT
Trigger: CGTGTCATCAGTTGCCGGCCCCTCTGCTCCTAGGCAGAGCAGCAGCTTCCAGCCGAGAGTAAACGCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 72 bp TCTGGGAAAGGCAGTAGCCAGCCTGCCTTTGGGCTTTaGTCCGGCGCTGAAACTTCTGCCATGGCCGTGTCC +
Preference number: 6 (lower is better)
Translates to: SGKGSSQPAFGL*SGAETSAMAVS
Trigger: GGACACGGCCATGGCAGAAGTTTCAGCGCCGGAGCAAAGCCCAAAGGCAGGCTGGCTACTGCCTTTCCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp GCAGGTCCTCCTCGCAGTCCTCCTCCCAAACTTTGCTaGAGGCCTCTGACAGCTCTGACCCTGACCTTGGAG +
Preference number: 6 (lower is better)
Translates to: AGPPRSPPPKLC*RPLTALTLTLE
Trigger: CTCCAAGGTCAGGGTCAGAGCTGTCAGAGGCCTCCAGCAAAGTTTGGGAGGAGGACTGCGAGGAGGACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp CTCTGGCATGAGGTACGGGAGTTTGCTCTTGGTGGATaGGCTCGGGTCAGCATCCCGGGTTCCCTCCTGGTA +
Preference number: 6 (lower is better)
Translates to: LWHEVREFALGG*ARVSIPGSLLV
Trigger: TACCAGGAGGGAACCCGGGATGCTGACCCGAGCCCATCCACCAAGAGCAAACTCCCGTACCTCATGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 90 bp ACCTTGGAGAGGGGATGTCTGGGAAAGGCAGTAGCCAGCCTGCCTTaGGGCTTTGCTCCGGCGCTGAAACTTCTGCCATGGCCGTGTCCA +
Preference number: 6 (lower is better)
Translates to: TLERGCLGKAVASLP*GFAPALKLLPWPCP
Trigger: TGGACACGGCCATGGCAGAAGTTTCAGCGCCGGAGCAAAGCCCAAAGGCAGGCTGGCTACTGCCTTTCCCAGACATCCCCTCTCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 72 bp GAGTGGCCAGCGAGCTGGCACTGCTCACACTTGGAGTaGGGGTCCCACAAAGCCAATCTCAGGCGTTCACTC +
Preference number: 6 (lower is better)
Translates to: EWPASWHCSHLE*GSHKANLRRSL
Trigger: GAGTGAACGCCTGAGATTGGCTTTGTGGGACCCTCACTCCAAGTGTGAGCAGTGCCAGCTCGCTGGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 72 bp GCTGGAGCTCCCAGAAAGCTGGATCAGGGTAGCCGCTaGTTTCTGGAACTCCCAGAGAGAGGGACAGGACAG +
Preference number: 6 (lower is better)
Translates to: AGAPRKLDQGSR*FLELPERGTGQ
Trigger: CTGTCCTGTCCCTCTCTCTGGGAGTTCCAGAAAGCAGCGGCTACCCTGATCCAGCTTTCTGGGAGCTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp CCTGGATTTGCTGGCGCAGGTCTTGTAGGATGGCCATaGCCGTCTGTATGGTCGCTGGCTGGTCGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: PGFAGAGLVGWP*PSVWSLAGRRK
Trigger: CTTCCTTCGACCAGCCAGCGACCATACAGACGGCCATGGCCATCCTACAAGACCTGCGCCAGCAAATCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CCA 72 bp ATTGTACGCATGTTTCCACGGCCTTCCGGAACCTTCTaGGTGCCCGGGTCCCTACATCGCAGTCCCCTTCTG +
Preference number: 6 (lower is better)
Translates to: IVRMFPRPSGTF*VPGSLHRSPLL
Trigger: CAGAAGGGGACTGCGATGTAGGGACCCGGGCACCCAGAAGGTTCCGGAAGGCCGTGGAAACATGCGTACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 72 bp CTCCCAGAAAGCTGGATCAGGGTAGCCGCTGCTTTCTaGAACTCCCAGAGAGAGGGACAGGACAGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LPESWIRVAAAF*NSQREGQDRLL
Trigger: GAGCAGCCTGTCCTGTCCCTCTCTCTGGGAGTTCCAGAAAGCAGCGGCTACCCTGATCCAGCTTTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp AAGCCAATCTCAGGCGTTCACTCCACCTGGGGGCTCTaGCTGGTGTCTCCAAAACGCTGTGGTTCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: KPISGVHSTWGL*LVSPKRCGSVA
Trigger: GGCCACCGAACCACAGCGTTTTGGAGACACCAGCAAGAGCCCCCAGGTGGAGTGAACGCCTGAGATTGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CAA 72 bp AGGGGATGTCTGGGAAAGGCAGTAGCCAGCCTGCCTTaGGGCTTTGCTCCGGCGCTGAAACTTCTGCCATGG +
Preference number: 6 (lower is better)
Translates to: RGCLGKAVASLP*GFAPALKLLPW
Trigger: CCATGGCAGAAGTTTCAGCGCCGGAGCAAAGCCCAAAGGCAGGCTGGCTACTGCCTTTCCCAGACATCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 90 bp CAGGTATTGGATTTCCCTCTGCTCCTTCTCCAATCTGCTGAGGGCTaGCTGCTGCTTCTCAACCAGCGCGGCCAGCACAGCTCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: QVLDFPLLLLQSAEG*LLLLNQRGQHSSVP
Trigger: AGGGACAGAGCTGTGCTGGCCGCGCTGGTTGAGAAGCAGCAGCAAGCCCTCAGCAGATTGGAGAAGGAGCAGAGGGAAATCCAATACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp GGTCCCACAAAGCCAATCTCAGGCGTTCACTCCACCTaGGGGCTCTTGCTGGTGTCTCCAAAACGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: GPTKPISGVHST*GLLLVSPKRCG
Trigger: ACCACAGCGTTTTGGAGACACCAGCAAGAGCCCCCAGGTGGAGTGAACGCCTGAGATTGGCTTTGTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 72 bp TACAGGAGTGGCCAGCGAGCTGGCACTGCTCACACTTaGAGTGAGGGTCCCACAAAGCCAATCTCAGGCGTT +
Preference number: 6 (lower is better)
Translates to: YRSGQRAGTAHT*SEGPTKPISGV
Trigger: AACGCCTGAGATTGGCTTTGTGGGACCCTCACTCCAAGTGTGAGCAGTGCCAGCTCGCTGGCCACTCCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS TCA 72 bp CCTCTGTGCAGCCCCGGGCAGGCTGTGGAAACTCTGTaGACCTCGGTTGCCTCATCTACAAAATGGGAGCAA +
Preference number: 6 (lower is better)
Translates to: PLCSPGQAVETL*TSVASSTKWEQ
Trigger: TTGCTCCCATTTTGTAGATGAGGCAACCGAGGTTCACAGAGTTTCCACAGCCTGCCCGGGGCTGCACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 72 bp CCCCGGGCAGGCTGTGGAAACTCTGTGAACCTCGGTTaGCTCATCTACAAAATGGGAGCAAGACTGCCAACC +
Preference number: 6 (lower is better)
Translates to: PRAGCGNSVNLG*LIYKMGARLPT
Trigger: GGTTGGCAGTCTTGCTCCCATTTTGTAGATGAGGCAACCGAGGTTCACAGAGTTTCCACAGCCTGCCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS GCA 72 bp TGCAGAAGCAGCTTCCTGTCCCGGTGCCTGAACAGCTaGGTGTGTCTCAGGTATTGGATTTCCCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: CRSSFLSRCLNS*VCLRYWISLCS
Trigger: GGAGCAGAGGGAAATCCAATACCTGAGACACACGCAGCTGTTCAGGCACCGGGACAGGAAGCTGCTTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS GCA 72 bp GGGTTCCCTCCTGGTAGCCAGAAGTCTCTCCTCCTTTaGCGAAATCTGCCCCTTCACTCAAAGAGGTCCACG +
Preference number: 6 (lower is better)
Translates to: GFPPGSQKSLLL*RNLPLHSKRST
Trigger: CGTGGACCTCTTTGAGTGAAGGGGCAGATTTCGGCAAAGGAGGAGAGACTTCTGGCTACCAGGAGGGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp GTGGCATCGGGCAACTGGGCACAAACCGGTGAGCACTaGGCAGCTATGACTTTCTCGCTGTCTCCTAAGTCC +
Preference number: 6 (lower is better)
Translates to: VASGNWAQTGEH*AAMTFSLSPKS
Trigger: GGACTTAGGAGACAGCGAGAAAGTCATAGCTGCCAAGTGCTCACCGGTTTGTGCCCAGTTGCCCGATGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563590.2
ENST00000569961.5
ENST00000624277.3
ENST00000638797.2
CDS CAA 72 bp GCCCCGGGCAGGCTGTGGAAACTCTGTGAACCTCGGTaGCCTCATCTACAAAATGGGAGCAAGACTGCCAAC +
Preference number: 6 (lower is better)
Translates to: APGRLWKLCEPR*PHLQNGSKTAN
Trigger: GTTGGCAGTCTTGCTCCCATTTTGTAGATGAGGCAACCGAGGTTCACAGAGTTTCCACAGCCTGCCCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CAA 90 bp CTCTGTGCAGCCCCGGGCAGGCTGTGGAAACTCTGTGAACCTCGGTaGCCTCATCTACAAAATGGGAGCAAGACTGCCAACCTTCGTCTT +
Preference number: 6 (lower is better)
Translates to: LCAAPGRLWKLCEPR*PHLQNGSKTANLRL
Trigger: AAGACGAAGGTTGGCAGTCTTGCTCCCATTTTGTAGATGAGGCAACCGAGGTTCACAGAGTTTCCACAGCCTGCCCGGGGCTGCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CAA 90 bp CTGCTGGTCCAGCTTCAGAGAATCCAGAAAGCTGGAGGTCTTCTGTaGGGTGTTGGGAAGGCATCTCACACATGGGTCCTCCTGCTGACC +
Preference number: 6 (lower is better)
Translates to: LLVQLQRIQKAGGLL*GVGKASHTWVLLLT
Trigger: GGTCAGCAGGAGGACCCATGTGTGAGATGCCTTCCCAACACCCAACAGAAGACCTCCAGCTTTCTGGATTCTCTGAAGCTGGACCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 72 bp TCTGATGCTGCAGAAGCAGCTTCCTGTCCCGGTGCCTaGACAGCTGCGTGTGTCTCAGGTATTGGATTTCCC +
Preference number: 6 (lower is better)
Translates to: SDAAEAASCPGA*TAACVSGIGFP
Trigger: GGGAAATCCAATACCTGAGACACACGCAGCTGTTCAGGCACCGGGACAGGAAGCTGCTTCTGCAGCATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS TCA 72 bp TTCACTCAAAGAGGTCCACGAAGGAAAGACCAGCAGTaGGTCCGAGTCACCGGCAGAAGAGATTTGCAGCGG +
Preference number: 6 (lower is better)
Translates to: FTQRGPRRKDQQ*VRVTGRRDLQR
Trigger: CCGCTGCAAATCTCTTCTGCCGGTGACTCGGACTCACTGCTGGTCTTTCCTTCGTGGACCTCTTTGAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CCA 72 bp GAGAATCCAGAAAGCTGGAGGTCTTCTGTTGGGTGTTaGGAAGGCATCTCACACATGGGTCCTCCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: ENPESWRSSVGC*EGISHMGPPAD
Trigger: GTCAGCAGGAGGACCCATGTGTGAGATGCCTTCCCAACACCCAACAGAAGACCTCCAGCTTTCTGGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 72 bp CAGCTTCAGAGAATCCAGAAAGCTGGAGGTCTTCTGTaGGGTGTTGGGAAGGCATCTCACACATGGGTCCTC +
Preference number: 6 (lower is better)
Translates to: QLQRIQKAGGLL*GVGKASHTWVL
Trigger: GAGGACCCATGTGTGAGATGCCTTCCCAACACCCAACAGAAGACCTCCAGCTTTCTGGATTCTCTGAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638797.2
CDS CAA 90 bp GTTGCCTCATCTACAAAATGGGAGCAAGACTGCCAACCTTCGTCTTaGTGTTTGTCTTTGGCCGCTCTTCTAGGGGAGGGCAACTTGGGG +
Preference number: 6 (lower is better)
Translates to: VASSTKWEQDCQPSS*CLSLAALLGEGNLG
Trigger: CCCCAAGTTGCCCTCCCCTAGAAGAGCGGCCAAAGACAAACACAAAGACGAAGGTTGGCAGTCTTGCTCCCATTTTGTAGATGAGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CAA 72 bp AAATGGGAGCAAGACTGCCAACCTTCGTCTTTGTGTTaGTCTTTGGCCGCTCTTCTAGGGGAGGGCAACTTG +
Preference number: 6 (lower is better)
Translates to: KWEQDCQPSSLC*SLAALLGEGNL
Trigger: CAAGTTGCCCTCCCCTAGAAGAGCGGCCAAAGACAAACACAAAGACGAAGGTTGGCAGTCTTGCTCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CAA 72 bp TCTACAAAATGGGAGCAAGACTGCCAACCTTCGTCTTaGTGTTTGTCTTTGGCCGCTCTTCTAGGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: STKWEQDCQPSS*CLSLAALLGEG
Trigger: GCCCTCCCCTAGAAGAGCGGCCAAAGACAAACACAAAGACGAAGGTTGGCAGTCTTGCTCCCATTTTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565954.1
CDS CCA 72 bp GTCCCGAAAGCCTCTAAAACCTTTAATAACGAGGCGTaGATGCTCTCCACGTGGAAAAGGATTTCTCTACCC +
Preference number: 6 (lower is better)
Translates to: VPKASKTFNNEA*MLSTWKRISLP
Trigger: GGGTAGAGAAATCCTTTTCCACGTGGAGAGCATCCACGCCTCGTTATTAAAGGTTTTAGAGGCTTTCGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624277.3