RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC186 (Homo sapiens)

Ensembl gene IDs: ENSG00000165813

Ensembl transcript IDs: ENST00000369285.7, ENST00000369286.1, ENST00000369287.8, ENST00000428953.1, ENST00000490661.1, ENST00000497592.1, ENST00000648613.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGGCATTTGTTTGGGGGTAATATCAAGAAGGGCCTTGGAGTCTTaGAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACA +
Preference number: 1 (lower is better)
Translates to: AGICLGVISRRALES*RDTCKPKFTVALLT
Trigger: TGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTTGATATTACCCCCAAACAAATGCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
3UTR TCA 90 bp CAGAGGGCAGAAGGCCCTCTAAATCCTTACATCAGGAGCTGTCTGTaGATTAGTATAGAGATAAGTATCTCTGATACATGTAATTACTTT +
Preference number: 1 (lower is better)
Translates to: QRAEGPLNPYIRSCL*ISIEISISDTCNYF
Trigger: AAAGTAATTACATGTATCAGAGATACTTATCTCTATACTAATTCACAGACAGCTCCTGATGTAAGGATTTAGAGGGCCTTCTGCCCTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCGATCATGGCTCACCTaGAGCCTTGACCTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLRSWLT*SLDLLC
Trigger: GCACAGGAGGTCAAGGCTGCAGGTGAGCCATGATCG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCAGCCTCCCGAGTAGCTaGAACCATAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLSLPSS*NHRHAP
Trigger: TGGTGCATGCCTATGGTTCCAGCTACTCGGGAGGCT...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCGGGGTTTTGCCATGTTaGCCTGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLGVLPC*PGWSQT
Trigger: AGTTTGAGACCAGCCAGGGCAACATGGCAAAACCCC...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCTCTGTTGCCTAGGCTaGAGTGCAGTGACACGATCA +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLLCCLG*SAVTRS
Trigger: TGATCGTGTCACTGCACTCCAGCCTAGGCAACAGAG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR TCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACCTCCTGTGCTCAAGTaGTTCTACCGCTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEPPVLK*FYRFSL
Trigger: GAGGCTGAAGCGGTAGAATCACTTGAGCACAGGAGG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACCGATCATGGCTCACCTaGAGCCTTGACCTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHRSWLT*SLDLLC
Trigger: GCACAGGAGGTCAAGGCTGCAGGTGAGCCATGATCG...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGCAGTGACACGATCATaGCTCACCTGCAGCCTTGAC +
Preference number: 2 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSAVTRS*LTCSLD
Trigger: GTCAAGGCTGCAGGTGAGCCATGATCGTGTCACTGC...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCCAAACAAGGCTTGCTaGAATATCTGCATAAGAGCC +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLPNKAC*NICIRA
Trigger: GGCTCTTATGCAGATATTGCAGCAAGCCTTGTTTGG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACAGCCTCCCGAGTAGCTaGAACCATAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHSLPSS*NHRHAP
Trigger: TGGTGCATGCCTATGGTTCCAGCTACTCGGGAGGCT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCACAGATAAGAAAACCTaGCAGAGGCAAACAATGCCT +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLTDKKT*QRQTMP
Trigger: AGGCATTGTTTGCCTCTGTCAGGTTTTCTTATCTGT...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTAGCCTTGACCTCCTGTaGTCAAGTGATTCTACCGCT +
Preference number: 2 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSSLDLL*SSDSTA
Trigger: AGCGGTAGAATCACTTGAGCACAGGAGGTCAAGGCT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAAACAATAGAGGTCAGTaGCACCTACTCCTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSENNRGQ*HLLLCG
Trigger: GCCACACAGGAGTAGGTGCCACTGACCTCTATTGTT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACCTCTGTTGCCTAGGCTaGAGTGCAGTGACACGATCA +
Preference number: 2 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHLCCLG*SAVTRS
Trigger: TGATCGTGTCACTGCACTCCAGCCTAGGCAACAGAG...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGCAGAAAGTAGAATGGTaGTTGCCAGGGACTGAGGGC +
Preference number: 2 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKQKVEW*LPGTEG
Trigger: GCCCTCAGTCCCTGGCAACCACCATTCTACTTTCTG...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
3UTR-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCTTTGGGGGAACTGTATaGTCACTCCACTATAATACA +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLFGGTV*SLHYNT
Trigger: TGTATTATAGTGGAGTGATCATACAGTTCCCCCAAA...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR TCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACAGGATATTGCCACCATaGGCCCAACTTTTAGAGCCC +
Preference number: 2 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHRILPP*AQLLEP
Trigger: GGGCTCTAAAAGTTGGGCTCATGGTGGCAATATCCT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR TCA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCTTCAGATTTGCAAAGTaGAAAAGTTCTGCAGATTGG +
Preference number: 2 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSFRFAK*KSSADW
Trigger: CCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAA...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
3UTR-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGCTTGCTGCAATATCTaGATAAGAGCCACGGTATCT +
Preference number: 2 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSACCNI*IRATVS
Trigger: AGATACCGTGGCTCTTATGCAGATATTGCAGCAAGC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCAAAGTGAAAAAGTTCTaGAGATTGGTTGTCCAACAG +
Preference number: 2 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSKVKKF*RLVVQQ
Trigger: CTGTTGGACAACCAATCTGCAGAACTTTTTCACTTT...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
3UTR-3UTR CCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACAACAATAGAGGTCAGTaGCACCTACTCCTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHNNRGQ*HLLLCG
Trigger: GCCACACAGGAGTAGGTGCCACTGACCTCTATTGTT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCTGAAACATCACATTTaGGGGAACTGTATGATCACT +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLLKHHI*GNCMIT
Trigger: AGTGATCATACAGTTCCCCCAAATGTGATGTTTCAG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCATCAGGAGCTGTCTGTaGATTAGTATAGAGATAAGT +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLIRSCL*ISIEIS
Trigger: ACTTATCTCTATACTAATTCACAGACAGCTCCTGAT...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTCCAAACAAGGCTTGCTaGAATATCTGCATAAGAGCC +
Preference number: 2 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSPNKAC*NICIRA
Trigger: GGCTCTTATGCAGATATTGCAGCAAGCCTTGTTTGG...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCGTGAGCTACTGCACCTaGTCTACTTTATGTTTTAAA +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLVSYCT*STLCFK
Trigger: TTTAAAACATAAAGTAGACCAGGTGCAGTAGCTCAC...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGACAGAGGCAAACAATaGCTGATCATTGCTAGTTAC +
Preference number: 2 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSDRGKQ*LIIASY
Trigger: GTAACTAGCAATGATCAGGCATTGTTTGCCTCTGTC...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCTATGCTGGTTTCTTTTaGAAGCTGGTTCTTCATATT +
Preference number: 2 (lower is better)
Translates to: RKTAICFQRTFARMFQSLYAGFF*KLVLHI
Trigger: AATATGAAGAACCAGCTTCCAAAAGAAACCAGCATA...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACGACAGAGGCAAACAATaGCTGATCATTGCTAGTTAC +
Preference number: 2 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHDRGKQ*LIIASY
Trigger: GTAACTAGCAATGATCAGGCATTGTTTGCCTCTGTC...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAAGGCATAGGATACTATaGATCAGATCACTATTTGGT +
Preference number: 2 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSRHRIL*IRSLFG
Trigger: ACCAAATAGTGATCTGATCCATAGTATCCTATGCCT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR TCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACTTTGGGGGAACTGTATaGTCACTCCACTATAATACA +
Preference number: 2 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHFGGTV*SLHYNT
Trigger: TGTATTATAGTGGAGTGATCATACAGTTCCCCCAAA...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR TCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTATCAGGAGCTGTCTGTaGATTAGTATAGAGATAAGT +
Preference number: 2 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSIRSCL*ISIEIS
Trigger: ACTTATCTCTATACTAATTCACAGACAGCTCCTGAT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAAAAACTCACCCGATATaGTGGAGTGTAAAAATAAAC +
Preference number: 2 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSKTHPI*WSVKIN
Trigger: GTTTATTTTTACACTCCAGCATATCGGGTGAGTTTT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGTTTATAGTGCCATATaGTGGTTTCTTTTGGAAGCT +
Preference number: 2 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSVYSAI*WFLLEA
Trigger: AGCTTCCAAAAGAAACCAGCATATGGCACTATAAAC...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAAAACCAAACAAGGCTTaGTGCAATATCTGCATAAGA +
Preference number: 2 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEKPNKA*CNICIR
Trigger: TCTTATGCAGATATTGCAGCAAGCCTTGTTTGGTTT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACTATAGTGCCATATGCTaGTTTCTTTTGGAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHYSAIC*FLLEAG
Trigger: ACCAGCTTCCAAAAGAAACCAGCATATGGCACTATA...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACCTGAAACATCACATTTaGGGGAACTGTATGATCACT +
Preference number: 2 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHLKHHI*GNCMIT
Trigger: AGTGATCATACAGTTCCCCCAAATGTGATGTTTCAG...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAGTGAGCTACTGCACCTaGTCTACTTTATGTTTTAAA +
Preference number: 2 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEVSYCT*STLCFK
Trigger: TTTAAAACATAAAGTAGACCAGGTGCAGTAGCTCAC...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTAGGCATAGGATACTATaGATCAGATCACTATTTGGT +
Preference number: 2 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSRHRIL*IRSLFG
Trigger: ACCAAATAGTGATCTGATCCATAGTATCCTATGCCT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR TCA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGTTGAACTCAGATATCTaGAAAACTCGACATTTGCTC +
Preference number: 2 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKLNSDI*KTRHLL
Trigger: GAGCAAATGTCGAGTTTTTCAGATATCTGAGTTCAA...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
3UTR-3UTR GCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAAAAACTCACCCGATATaGTGGAGTGTAAAAATAAAC +
Preference number: 2 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEKTHPI*WSVKIN
Trigger: GTTTATTTTTACACTCCAGCATATCGGGTGAGTTTT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR GCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAAGAAAAACTCGACATTTaGTCACACATTCAGCAACTA +
Preference number: 2 (lower is better)
Translates to: FQICKVKKFCRLVVQQCEEKLDI*SHIQQL
Trigger: TAGTTGCTGAATGTGTGAGCAAATGTCGAGTTTTTC...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
3UTR-3UTR CCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAATATGCTGGTTTCTTTTaGAAGCTGGTTCTTCATATT +
Preference number: 2 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEYAGFF*KLVLHI
Trigger: AATATGAAGAACCAGCTTCCAAAAGAAACCAGCATA...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR GCA 72 bp ACACGATCATGGCTCACCTGCAGCCTTGACCTCCTGTaGTCAAGTGATTCTACCGCTTCAGCCTCCCGAGTA +
Preference number: 3 (lower is better)
Translates to: TRSWLTCSLDLL*SSDSTASASRV
Trigger: TACTCGGGAGGCTGAAGCGGTAGAATCACTTGAGCACAGGAGGTCAAGGCTGCAGGTGAGCCATGATCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CAA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCAAAGTAGAATGGTGGTaGCCAGGGACTGAGGGCAAG +
Preference number: 3 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSKVEWW*PGTEGK
Trigger: CTTGCCCTCAGTCCCTGGCAACCACCATTCTACTTT...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
3UTR TCA 72 bp TGTTTGGGGGTAATATCAAGAAGGGCCTTGGAGTCTTaGAGAGATACTTGCAAACCCAAGTTCACAGTAGCA +
Preference number: 3 (lower is better)
Translates to: CLGVISRRALES*RDTCKPKFTVA
Trigger: TGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTTGATATTACCCCCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
3UTR-3UTR CAA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCACTGAAACATCACATTaGGGGGAACTGTATGATCAC +
Preference number: 3 (lower is better)
Translates to: RKTAICFQRTFARMFQSLTETSH*GELYDH
Trigger: GTGATCATACAGTTCCCCCAAATGTGATGTTTCAGT...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCACAAACCAAACAAGGCTaGCTGCAATATCTGCATAAG +
Preference number: 3 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSQTKQG*LQYLHK
Trigger: CTTATGCAGATATTGCAGCAAGCCTTGTTTGGTTTG...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR GCA 72 bp CTAAAACAGATAAGAAAACCTGACAGAGGCAAACAATaGCTGATCATTGCTAGTTACCAAGAGCTAGCTTTC +
Preference number: 3 (lower is better)
Translates to: LKQIRKPDRGKQ*LIIASYQELAF
Trigger: GAAAGCTAGCTCTTGGTAACTAGCAATGATCAGGCATTGTTTGCCTCTGTCAGGTTTTCTTATCTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAATATGCTGGTTTCTTTaGGAAGCTGGTTCTTCATAT +
Preference number: 3 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSICWFL*EAGSSY
Trigger: ATATGAAGAACCAGCTTCCAAAAGAAACCAGCATAT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR TCA 72 bp GAAGGCCCTCTAAATCCTTACATCAGGAGCTGTCTGTaGATTAGTATAGAGATAAGTATCTCTGATACATGT +
Preference number: 3 (lower is better)
Translates to: EGPLNPYIRSCL*ISIEISISDTC
Trigger: ACATGTATCAGAGATACTTATCTCTATACTAATTCACAGACAGCTCCTGATGTAAGGATTTAGAGGGCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAATATGCTGGTTTCTTTaGGAAGCTGGTTCTTCATAT +
Preference number: 3 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEICWFL*EAGSSY
Trigger: ATATGAAGAACCAGCTTCCAAAAGAAACCAGCATAT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCAGGAAAAGACCGCGGTaGGAAACACAGCCGACGCCT +
Preference number: 4 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSRKRPR*ETQPTP
Trigger: AGGCGTCGGCTGTGTTTCTCACCGCGGTCTTTTCCT...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CCA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCAGGCTGCTGGAGCTCTaGCTCAGGGGCCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSRLLEL*LRGQLF
Trigger: GAAAAGTTGGCCCCTGAGCCAGAGCTCCAGCAGCCT...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCAGGAAAAGACCGCGGTaGGAAACACAGCCGACGCCT +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLRKRPR*ETQPTP
Trigger: AGGCGTCGGCTGTGTTTCTCACCGCGGTCTTTTCCT...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACCCAACTCAGCCTCCTaGGTAGCTGGGACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEPNSAS*VAGTPA
Trigger: GGCTGGGGTCCCAGCTACCCAGGAGGCTGAGTTGGG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCGTTTCCCCAAACCCCTaGGGAGCTGACACATCAACA +
Preference number: 4 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSVSPNP*GADTST
Trigger: TGTTGATGTGTCAGCTCCGCAGGGGTTTGGGGAAAC...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCAAACCCCTGCGGAGCTaGCACATCAACAAAGATGGC +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLKPLRS*HINKDG
Trigger: GCCATCTTTGTTGATGTGTCAGCTCCGCAGGGGTTT...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648613.1
CDS-3UTR TCA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCAGGGCCTTGGAGTCTTaGAGAGATACTTGCAAACCC +
Preference number: 4 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSRALES*RDTCKP
Trigger: GGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCT...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCCAGTTATAAAGGGCTaGGATGAGCCACAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLPVIKG*DEPQKP
Trigger: GGGCTTCTGTGGCTCATCTCAGCCCTTTATAACTGG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCACCAACCAGCCAAGAGTaGGAGGAAAAGACCGCGGTG +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSPTSQE*EEKTAV
Trigger: CACCGCGGTCTTTTCCTCCCACTCTTGGCTGGTTGG...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCCCAACTCAGCCTCCTaGGTAGCTGGGACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYPNSAS*VAGTPA
Trigger: GGCTGGGGTCCCAGCTACCCAGGAGGCTGAGTTGGG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCTCTGTCACCCAGGCTaGAGTATAGAGTACAGTGGC +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLLCHPG*SIEYSG
Trigger: GCCACTGTACTCTATACTCCAGCCTGGGTGACAGAG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCTATGTGGTCTGTCTCTaGCATGCTGACTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLYVVCL*HADWHQ
Trigger: TTGGTGCCAGTCAGCATGTCAGAGACAGACCACATA...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCAGCTGCTCCTGTAGCTaGTCTGCAGTTTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLSCSCS*SAVFTL
Trigger: CAAGGTGAAAACTGCAGATCAGCTACAGGAGCAGCT...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTCGATCATGGCTCACCTaGAGCCTTGACCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSRSWLT*SLDLLC
Trigger: GCACAGGAGGTCAAGGCTGCAGGTGAGCCATGATCG...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAGGAAAAGACCGCGGTaGGAAACACAGCCGACGCCT +
Preference number: 4 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQRKRPR*ETQPTP
Trigger: AGGCGTCGGCTGTGTTTCTCACCGCGGTCTTTTCCT...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCGACTTCCCATGCTGCTaGCTTCTTTGTCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLDFPCC*LLCHSF
Trigger: GAAGCTATGACAAAGAAGTCAGCAGCATGGGAAGTC...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCACCAGTTATAAAGGGCTaGGATGAGCCACAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSPVIKG*DEPQKP
Trigger: GGGCTTCTGTGGCTCATCTCAGCCCTTTATAACTGG...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAAGCCTCATGTACGAGTaGGATTTCTGGGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSSLMYE*DFWATC
Trigger: GCAAGTGGCCCAGAAATCTCACTCGTACATGAGGCT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCAAGCGAGTTCAGCTTaGAGAGTTTGGACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLQASSA*RVWTSS
Trigger: AGAGGAAGTCCAAACTCTGCAAGCTGAACTCGCTTG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAACCAACCAGCCAAGAGTaGGAGGAAAAGACCGCGGTG +
Preference number: 4 (lower is better)
Translates to: FQICKVKKFCRLVVQQCEPTSQE*EEKTAV
Trigger: CACCGCGGTCTTTTCCTCCCACTCTTGGCTGGTTGG...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CCA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAACCAACCAGCCAAGAGTaGGAGGAAAAGACCGCGGTG +
Preference number: 4 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQPTSQE*EEKTAV
Trigger: CACCGCGGTCTTTTCCTCCCACTCTTGGCTGGTTGG...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACCCAACCAGCCAAGAGTaGGAGGAAAAGACCGCGGTG +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHPTSQE*EEKTAV
Trigger: CACCGCGGTCTTTTCCTCCCACTCTTGGCTGGTTGG...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCTTGTTCAGAATTTTCTaGGCCTGTGTCTGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSLFRIF*ACVCFG
Trigger: GCCAAAACAGACACAGGCTCAGAAAATTCTGAACAA...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCTTTCTTCGTGCTTGCTaGAGTTGTTTGGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLFLRAC*SCLVRS
Trigger: GGATCTCACCAAACAACTTCAGCAAGCACGAAGAAA...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACCCTCCTGTGCTCAAGTaGTTCTACCGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHPPVLK*FYRFSL
Trigger: GAGGCTGAAGCGGTAGAATCACTTGAGCACAGGAGG...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAAGGATATTGCCACCATaGGCCCAACTTTTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSRILPP*AQLLEP
Trigger: GGGCTCTAAAAGTTGGGCTCATGGTGGCAATATCCT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTAGCCTCATGTACGAGTaGGATTTCTGGGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSSLMYE*DFWATC
Trigger: GCAAGTGGCCCAGAAATCTCACTCGTACATGAGGCT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAATCGATCTTCTGCACTaGTTCGAGCATTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSIDLLH*FEHSGT
Trigger: GGTCCCTGAATGCTCGAAGCAGTGCAGAAGATCGAT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCGGGCATGTGCTTTTTaGAGCCTAACTATTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLRACAF*SLTILS
Trigger: TGAGAGAATAGTTAGGCTGCAAAAAGCACATGCCCG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCGATCATGGCTCACCTaGAGCCTTGACCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYRSWLT*SLDLLC
Trigger: GCACAGGAGGTCAAGGCTGCAGGTGAGCCATGATCG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGCAATCATAGCTCACTaGAAGCTTCAACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSAIIAH*KLQPPR
Trigger: CCTGGGAGGTTGAAGCTTGCAGTGAGCTATGATTGC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGCCTGTTCCATCCGTTaGGCCATCTCTTTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSACSIR*AISLCN
Trigger: GTTACACAAAGAGATGGCCCAACGGATGGAACAGGC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCTCAGCTTGCAGAGTTTaGACTTCCTCTTTTCGCAGT +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLSACRV*TSSFRS
Trigger: ACTGCGAAAAGAGGAAGTCCAAACTCTGCAAGCTGA...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACTCTGTTGCCTAGGCTaGAGTGCAGTGACACGATCA +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSELCCLG*SAVTRS
Trigger: TGATCGTGTCACTGCACTCCAGCCTAGGCAACAGAG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCAAGTCTGAAGTGGTATaGGGAAAATGGAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLKSEVV*GKWSHG
Trigger: GCCATGACTCCATTTTCCCCATACCACTTCAGACTT...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
3UTR CAA 72 bp TTAGGAAACGTGCAGAACCACCAGGAAAACAGCAATTaGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LGNVQNHQENSN*LSAYLCKDVPK
Trigger: CTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCTGGTGGTTCTGCACGTTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAAAAACCCCTGCGGAGCTaGCACATCAACAAAGATGGC +
Preference number: 4 (lower is better)
Translates to: FQICKVKKFCRLVVQQCEKPLRS*HINKDG
Trigger: GCCATCTTTGTTGATGTGTCAGCTCCGCAGGGGTTT...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369286.1
CDS-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCACTGGCTTTGTAACTaGCTTTCACTACAGGAAACT +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLHWLCN*LSLQET
Trigger: AGTTTCCTGTAGTGAAAGTCAGTTACAAAGCCAGTG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGTTATCCACAGCTACTaGGGACCCAGTATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSVIHSY*GPSIFW
Trigger: CCAGAAAATACTGGGTCCTCAGTAGCTGTGGATAAC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCCTCCTGTGCTCAAGTaGTTCTACCGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYPPVLK*FYRFSL
Trigger: GAGGCTGAAGCGGTAGAATCACTTGAGCACAGGAGG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAGTTTCCCCAAACCCCTaGGGAGCTGACACATCAACA +
Preference number: 4 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQVSPNP*GADTST
Trigger: TGTTGATGTGTCAGCTCCGCAGGGGTTTGGGGAAAC...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR GCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACGTTTCCCCAAACCCCTaGGGAGCTGACACATCAACA +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHVSPNP*GADTST
Trigger: TGTTGATGTGTCAGCTCCGCAGGGGTTTGGGGAAAC...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATGGAGATCGATCTTCTaGACTGCTTCGAGCATTCAG +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSWRSIF*TASSIQ
Trigger: CTGAATGCTCGAAGCAGTGCAGAAGATCGATCTCCA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAAGCCTTGACCTCCTGTaGTCAAGTGATTCTACCGCT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSESLDLL*SSDSTA
Trigger: AGCGGTAGAATCACTTGAGCACAGGAGGTCAAGGCT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGAAGTAGAGGCTATGTaGTCTGTCTCTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSEVEAM*SVSDML
Trigger: CAGCATGTCAGAGACAGACCACATAGCCTCTACTTC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAACAGAAAGTAGAATGGTaGTTGCCAGGGACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQQKVEW*LPGTEG
Trigger: GCCCTCAGTCCCTGGCAACCACCATTCTACTTTCTG...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCGTGACTGCAAAGAATTaGATTCAGACTGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLVTAKN*IQTEAV
Trigger: CACAGCTTCAGTCTGAATCCAATTCTTTGCAGTCAC...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCGGCCTTATCTACTTGTaGAAAGTTATCCACAGCTAC +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLGLIYL*KVIHSY
Trigger: GTAGCTGTGGATAACTTTCCACAAGTAGATAAGGCC...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACAGCCTCCCGAGTAGCTaGAACCATAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYSLPSS*NHRHAP
Trigger: TGGTGCATGCCTATGGTTCCAGCTACTCGGGAGGCT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACGCAGTGACACGATCATaGCTCACCTGCAGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYAVTRS*LTCSLD
Trigger: GTCAAGGCTGCAGGTGAGCCATGATCGTGTCACTGC...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTCTGTCTCTGACATGCTaGCTGGCACCAATTCACTTT +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSLSLTC*LAPIHF
Trigger: AAAGTGAATTGGTGCCAGTCAGCATGTCAGAGACAG...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGTATGTGGTCTGTCTCTaGCATGCTGACTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKYVVCL*HADWHQ
Trigger: TTGGTGCCAGTCAGCATGTCAGAGACAGACCACATA...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAATATGTGGTCTGTCTCTaGCATGCTGACTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: FQICKVKKFCRLVVQQCEYVVCL*HADWHQ
Trigger: TTGGTGCCAGTCAGCATGTCAGAGACAGACCACATA...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAAAGGGCCTTGGAGTCTTaGAGAGATACTTGCAAACCC +
Preference number: 4 (lower is better)
Translates to: FQICKVKKFCRLVVQQCERALES*RDTCKP
Trigger: GGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCT...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGTTATCCACAGCTACTaGGGACCCAGTATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSVIHSY*GPSIFW
Trigger: CCAGAAAATACTGGGTCCTCAGTAGCTGTGGATAAC...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCGAAAAACTCGACATTTaGTCACACATTCAGCAACTA +
Preference number: 4 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSEKLDI*SHIQQL
Trigger: TAGTTGCTGAATGTGTGAGCAAATGTCGAGTTTTTC...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTCAAGCGAGTTCAGCTTaGAGAGTTTGGACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSQASSA*RVWTSS
Trigger: AGAGGAAGTCCAAACTCTGCAAGCTGAACTCGCTTG...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACATCGATCTTCTGCACTaGTTCGAGCATTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHIDLLH*FEHSGT
Trigger: GGTCCCTGAATGCTCGAAGCAGTGCAGAAGATCGAT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCCTCTGAAGAAAGTGTaGCTGATTCTTCTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLPLKKV*LILLVK
Trigger: TTTTACGAGAAGAATCAGGCACACTTTCTTCAGAGG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACAGCCTTGACCTCCTGTaGTCAAGTGATTCTACCGCT +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHSLDLL*SSDSTA
Trigger: AGCGGTAGAATCACTTGAGCACAGGAGGTCAAGGCT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACGCAATCATAGCTCACTaGAAGCTTCAACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHAIIAH*KLQPPR
Trigger: CCTGGGAGGTTGAAGCTTGCAGTGAGCTATGATTGC...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTCAGAAGCCCAAGATCTaGTCTGATTGTCTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSQKPKI*SDCLLA
Trigger: AGCTAGGAGACAATCAGAGCAGATCTTGGGCTTCTG...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAGAAGTAGAGGCTATGTaGTCTGTCTCTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEEVEAM*SVSDML
Trigger: CAGCATGTCAGAGACAGACCACATAGCCTCTACTTC...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACGCCTGTTCCATCCGTTaGGCCATCTCTTTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHACSIR*AISLCN
Trigger: GTTACACAAAGAGATGGCCCAACGGATGGAACAGGC...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCATTGCTTCTTTTTCTTaGCGTGCCTCTTCACATTTC +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLIASFS*RASSHF
Trigger: GAAATGTGAAGAGGCACGCCAAGAAAAAGAAGCAAT...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATTAGTTTCATACAGCTaGTGCAACCGTCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSLVSYS*CNRPFS
Trigger: GGAGAAAGGACGGTTGCACCAGCTGTATGAAACTAA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATCAGCTTGCAGAGTTTaGACTTCCTCTTTTCGCAGT +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSSACRV*TSSFRS
Trigger: ACTGCGAAAAGAGGAAGTCCAAACTCTGCAAGCTGA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGGACCCAGTATTTTCTaGAGATCGATCTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSGPSIF*RSIFCT
Trigger: AGTGCAGAAGATCGATCTCCAGAAAATACTGGGTCC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCTCTGTTGCCTAGGCTaGAGTGCAGTGACACGATCA +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYLCCLG*SAVTRS
Trigger: TGATCGTGTCACTGCACTCCAGCCTAGGCAACAGAG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCTCTGTCACCCAGGCTaGAGTATAGAGTACAGTGGC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYLCHPG*SIEYSG
Trigger: GCCACTGTACTCTATACTCCAGCCTGGGTGACAGAG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGCTGTCTCTGACATGCTaGCTGGCACCAATTCACTTT +
Preference number: 4 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKLSLTC*LAPIHF
Trigger: AAAGTGAATTGGTGCCAGTCAGCATGTCAGAGACAG...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAACTGTCTCTGACATGCTaGCTGGCACCAATTCACTTT +
Preference number: 4 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQLSLTC*LAPIHF
Trigger: AAAGTGAATTGGTGCCAGTCAGCATGTCAGAGACAG...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACTATGTGGTCTGTCTCTaGCATGCTGACTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYYVVCL*HADWHQ
Trigger: TTGGTGCCAGTCAGCATGTCAGAGACAGACCACATA...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATTGTTCAGAATTTTCTaGGCCTGTGTCTGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSLFRIF*ACVCFG
Trigger: GCCAAAACAGACACAGGCTCAGAAAATTCTGAACAA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCTCTACGAAGAGCTCCTaGTGCTTCTTATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLSTKSS*CFLFSL
Trigger: TAAAGAAAATAAGAAGCATCAGGAGCTCTTCGTAGA...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACAGCTGCTCCTGTAGCTaGTCTGCAGTTTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYSCSCS*SAVFTL
Trigger: CAAGGTGAAAACTGCAGATCAGCTACAGGAGCAGCT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCACACTGGCTTTGTAACTaGCTTTCACTACAGGAAACT +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSHWLCN*LSLQET
Trigger: AGTTTCCTGTAGTGAAAGTCAGTTACAAAGCCAGTG...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATATATAAAGATGCCATaGTGCCACCCCGTCTACTTA +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSYIKMP*CHPVYL
Trigger: TAAGTAGACGGGGTGGCATCATGGCATCTTTATATA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCACCTGTAATTTTCGGTTaGTTTCCAAAGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSPVIFG*FPKRAP
Trigger: TGGAGCTCTCTTTGGAAATCAACCGAAAATTACAGG...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAGCCCAAGATCTGCTCTaGTTGTCTCCTAGCTATTTT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEAQDLL*LSPSYF
Trigger: AAAATAGCTAGGAGACAATCAGAGCAGATCTTGGGC...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGCCCAAGATCTGCTCTaGTTGTCTCCTAGCTATTTT +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSAQDLL*LSPSYF
Trigger: AAAATAGCTAGGAGACAATCAGAGCAGATCTTGGGC...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCTGCCAGAAAACAAGTTaGATGAGTCTTCCTTTAATT +
Preference number: 4 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSCQKTS*MSLPLI
Trigger: AATTAAAGGAAGACTCATGCAACTTGTTTTCTGGCA...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR GCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCTTCTTTTTCTTGGCGTaGCTCTTCACATTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLFFFLA*LFTFLV
Trigger: AACAAGAAATGTGAAGAGGCACGCCAAGAAAAAGAA...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATTCAGACTGAAGCTGTaGATTCTTACTAGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSFRLKL*ILTSEP
Trigger: AGGCTCACTAGTAAGAATGCACAGCTTCAGTCTGAA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCTACCTGGGTACTCAATaGTTTAACTTCTGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLYLGTQ*FNFCLS
Trigger: AGACAAACAGAAGTTAAAGCATTGAGTACCCAGGTA...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTCGGGCATGTGCTTTTTaGAGCCTAACTATTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSRACAF*SLTILS
Trigger: TGAGAGAATAGTTAGGCTGCAAAAAGCACATGCCCG...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCTCTGTTCTAGTTCATaGTGGTGTTTAATAAGACGT +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLLCSSS*WCLIRR
Trigger: ACGTCTTATTAAACACCAGCATGAACTAGAACAGAG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGACAGAGGCAAACAATaGCTGATCATTGCTAGTTAC +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSDRGKQ*LIIASY
Trigger: GTAACTAGCAATGATCAGGCATTGTTTGCCTCTGTC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAGCTTGCTGCAATATCTaGATAAGAGCCACGGTATCT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEACCNI*IRATVS
Trigger: AGATACCGTGGCTCTTATGCAGATATTGCAGCAAGC...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCAAACCAAACAAGGCTTaGTGCAATATCTGCATAAGA +
Preference number: 4 (lower is better)
Translates to: RKTAICFQRTFARMFQSLKPNKA*CNICIR
Trigger: TCTTATGCAGATATTGCAGCAAGCCTTGTTTGGTTT...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACCAGAAGCCCAAGATCTaGTCTGATTGTCTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHQKPKI*SDCLLA
Trigger: AGCTAGGAGACAATCAGAGCAGATCTTGGGCTTCTG...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAAGAAGTAGAGGCTATGTaGTCTGTCTCTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: FQICKVKKFCRLVVQQCEEVEAM*SVSDML
Trigger: CAGCATGTCAGAGACAGACCACATAGCCTCTACTTC...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CCA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAGAAGTAGAGGCTATGTaGTCTGTCTCTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQEVEAM*SVSDML
Trigger: CAGCATGTCAGAGACAGACCACATAGCCTCTACTTC...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAGGACCCAGTATTTTCTaGAGATCGATCTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEGPSIF*RSIFCT
Trigger: AGTGCAGAAGATCGATCTCCAGAAAATACTGGGTCC...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGGCCTTATCTACTTGTaGAAAGTTATCCACAGCTAC +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSGLIYL*KVIHSY
Trigger: GTAGCTGTGGATAACTTTCCACAAGTAGATAAGGCC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAAAGTCTGAAGTGGTATaGGGAAAATGGAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEKSEVV*GKWSHG
Trigger: GCCATGACTCCATTTTCCCCATACCACTTCAGACTT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACTTCAAATCTGCTCCTaGTCTTCGTTTTACATCCCA +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSELQICS*SSFYIP
Trigger: TGGGATGTAAAACGAAGATCAGGAGCAGATTTGAAG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369287.8
CDS-3UTR TCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACTTTCTTCGTGCTTGCTaGAGTTGTTTGGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHFLRAC*SCLVRS
Trigger: GGATCTCACCAAACAACTTCAGCAAGCACGAAGAAA...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACTTCCACTCTCAACCTaGTCTAATTTTCTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSELPLST*SNFLRA
Trigger: AGCACGAAGAAAATTAGATCAGGTTGAGAGTGGAAG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACGACTTCCCATGCTGCTaGCTTCTTTGTCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYDFPCC*LLCHSF
Trigger: GAAGCTATGACAAAGAAGTCAGCAGCATGGGAAGTC...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTACAGATAAGAAAACCTaGCAGAGGCAAACAATGCCT +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSTDKKT*QRQTMP
Trigger: AGGCATTGTTTGCCTCTGTCAGGTTTTCTTATCTGT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATTTGGGGGAACTGTATaGTCACTCCACTATAATACA +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSFGGTV*SLHYNT
Trigger: TGTATTATAGTGGAGTGATCATACAGTTCCCCCAAA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAAAACAGGCTAAAGTCTaGAGTGGTATGGGGAAAATG +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEKQAKV*SGMGKM
Trigger: CATTTTCCCCATACCACTTCAGACTTTAGCCTGTTT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGAAACATGCGTGACATaGTTAATCTTTATGAGCACC +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSETCVT*LIFMST
Trigger: GGTGCTCATAAAGATTAATCATGTCACGCATGTTTC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAATTTTTCCGGGCATGTaGTTTTTGCAGCCTAACTAT +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSIFPGM*FLQPNY
Trigger: ATAGTTAGGCTGCAAAAAGCACATGCCCGGAAAAAT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACCCAAACAAGGCTTGCTaGAATATCTGCATAAGAGCC +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHPNKAC*NICIRA
Trigger: GGCTCTTATGCAGATATTGCAGCAAGCCTTGTTTGG...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCTTCACATTTCTTGTTaGCCTGTTCCATCCGTTGGG +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYLHISC*PVPSVG
Trigger: CCCAACGGATGGAACAGGCCAACAAGAAATGTGAAG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACTTAGTTTCATACAGCTaGTGCAACCGTCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHLVSYS*CNRPFS
Trigger: GGAGAAAGGACGGTTGCACCAGCTGTATGAAACTAA...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAACTTCAAATCTGCTCCTaGTCTTCGTTTTACATCCCA +
Preference number: 4 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQLQICS*SSFYIP
Trigger: TGGGATGTAAAACGAAGATCAGGAGCAGATTTGAAG...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369286.1
CDS-3UTR TCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACTATATAAAGATGCCATaGTGCCACCCCGTCTACTTA +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHYIKMP*CHPVYL
Trigger: TAAGTAGACGGGGTGGCATCATGGCATCTTTATATA...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAATTTTTCCGGGCATGTaGTTTTTGCAGCCTAACTAT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEIFPGM*FLQPNY
Trigger: ATAGTTAGGCTGCAAAAAGCACATGCCCGGAAAAAT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTAGGCATGCACCACCATaGCTGGATAATCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSRHAPP*LDNLLK
Trigger: TTTTAAAAGATTATCCAGGCATGGTGGTGCATGCCT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACGCTTGCTGCAATATCTaGATAAGAGCCACGGTATCT +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYACCNI*IRATVS
Trigger: AGATACCGTGGCTCTTATGCAGATATTGCAGCAAGC...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCCAAACAAGGCTTGCTaGAATATCTGCATAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYPNKAC*NICIRA
Trigger: GGCTCTTATGCAGATATTGCAGCAAGCCTTGTTTGG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAACATTAAAAGGATATTaGCACCATGAGCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSTLKGY*HHEPNF
Trigger: AAAGTTGGGCTCATGGTGGCAATATCCTTTTAATGT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCTTTCAGCGTACCTTTaGAAGGATGTTCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYLSAYL*KDVPKP
Trigger: AGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTAGGAAAACAGCAATTTaGTTTCAGCGTACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSRKTAI*FQRTFA
Trigger: TGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAAGGAAAACAGCAATTTaGTTTCAGCGTACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSERKTAI*FQRTFA
Trigger: TGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTATTGCTTCTTTTTCTTaGCGTGCCTCTTCACATTTC +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSIASFS*RASSHF
Trigger: GAAATGTGAAGAGGCACGCCAAGAAAAAGAAGCAAT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATTCTCTCAATCAACATaGCCTTATCTACTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSFSQST*PYLLVE
Trigger: TTCCACAAGTAGATAAGGCCATGTTGATTGAGAGAA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAATATAGTGCCATATGCTaGTTTCTTTTGGAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEYSAIC*FLLEAG
Trigger: ACCAGCTTCCAAAAGAAACCAGCATATGGCACTATA...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACTGAAACATCACATTTaGGGGAACTGTATGATCACT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSELKHHI*GNCMIT
Trigger: AGTGATCATACAGTTCCCCCAAATGTGATGTTTCAG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATCTTCGTTTTACATCTaGGACTGTACTGCGTATTTT +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSSSFYI*DCTAYF
Trigger: AAAATACGCAGTACAGTCCCAGATGTAAAACGAAGA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648613.1
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACTTGTTCAGAATTTTCTaGGCCTGTGTCTGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYLFRIF*ACVCFG
Trigger: GCCAAAACAGACACAGGCTCAGAAAATTCTGAACAA...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTTCTTTGTGTAACTGCTaGACTGCATTTTTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSSLCNC*TAFLAV
Trigger: TACAGCTAAAAATGCAGTTCAGCAGTTACACAAAGA...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAGCATGTTTACGTCTCTaGGTTACTAACTCATCTTTT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEACLRL*VTNSSF
Trigger: AAAAGATGAGTTAGTAACTCAGAGACGTAAACATGC...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACACAGATAAGAAAACCTaGCAGAGGCAAACAATGCCT +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYTDKKT*QRQTMP
Trigger: AGGCATTGTTTGCCTCTGTCAGGTTTTCTTATCTGT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACAAACAGGCTAAAGTCTaGAGTGGTATGGGGAAAATG +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYKQAKV*SGMGKM
Trigger: CATTTTCCCCATACCACTTCAGACTTTAGCCTGTTT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACTATATTCTCTCTTCTaGTTTCCACAGGTAACAAGA +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSELYSLF*FPQVTR
Trigger: TCTTGTTACCTGTGGAAATCAGAAGAGAGAATATAG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648613.1
CDS-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAATTGTGTTCATATGCTaGTTCTCAGTTTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSIVFIC*FSVSVL
Trigger: AAGAACAGAAACTGAGAAGCAGCATATGAACACAAT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAATTCTCTTTTCCTACTaGCTTCGATGTCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSILFSY*LRCLFV
Trigger: TACAAAAAGACATCGAAGGCAGTAGGAAAAGAGAAT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACTCTGTTCTAGTTCATaGTGGTGTTTAATAAGACGT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSELCSSS*WCLIRR
Trigger: ACGTCTTATTAAACACCAGCATGAACTAGAACAGAG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACGACAGAGGCAAACAATaGCTGATCATTGCTAGTTAC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYDRGKQ*LIIASY
Trigger: GTAACTAGCAATGATCAGGCATTGTTTGCCTCTGTC...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAGTTTATAGTGCCATATaGTGGTTTCTTTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEVYSAI*WFLLEA
Trigger: AGCTTCCAAAAGAAACCAGCATATGGCACTATAAAC...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAATATCAAGAAGGGCCTTaGAGTCTTGAAGAGATACTT +
Preference number: 4 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQYQEGP*SLEEIL
Trigger: AAGTATCTCTTCAAGACTCCAAGGCCCTTCTTGATA...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CCA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGTATCAAGAAGGGCCTTaGAGTCTTGAAGAGATACTT +
Preference number: 4 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKYQEGP*SLEEIL
Trigger: AAGTATCTCTTCAAGACTCCAAGGCCCTTCTTGATA...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTTTCTCTCAATCAACATaGCCTTATCTACTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSFSQST*PYLLVE
Trigger: TTCCACAAGTAGATAAGGCCATGTTGATTGAGAGAA...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATGTTCTAGTTCATGCTaGTGTTTAATAAGACGTTCT +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSCSSSC*CLIRRS
Trigger: AGAACGTCTTATTAAACACCAGCATGAACTAGAACA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATATGCTGGTTTCTTTTaGAAGCTGGTTCTTCATATT +
Preference number: 4 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSYAGFF*KLVLHI
Trigger: AATATGAAGAACCAGCTTCCAAAAGAAACCAGCATA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAAATCATAGGGGCTTTCTaGATAAGTCTTTTCATTAGC +
Preference number: 4 (lower is better)
Translates to: FQICKVKKFCRLVVQQCEIIGAF*ISLFIS
Trigger: GCTAATGAAAAGACTTATTCAGAAAGCCCCTATGAT...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACATCATAGGGGCTTTCTaGATAAGTCTTTTCATTAGC +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHIIGAF*ISLFIS
Trigger: GCTAATGAAAAGACTTATTCAGAAAGCCCCTATGAT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAATTGAACTCAGATATCTaGAAAACTCGACATTTGCTC +
Preference number: 4 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQLNSDI*KTRHLL
Trigger: GAGCAAATGTCGAGTTTTTCAGATATCTGAGTTCAA...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAATTCAGATTTGCAAAGTaGAAAAGTTCTGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: FQICKVKKFCRLVVQQCEFRFAK*KSSADW
Trigger: CCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAA...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR TCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACTCTTTGTGTAACTGCTaGACTGCATTTTTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHSLCNC*TAFLAV
Trigger: TACAGCTAAAAATGCAGTTCAGCAGTTACACAAAGA...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACATCAGGAGCTGTCTGTaGATTAGTATAGAGATAAGT +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHIRSCL*ISIEIS
Trigger: ACTTATCTCTATACTAATTCACAGACAGCTCCTGAT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACGAAACATGCGTGACATaGTTAATCTTTATGAGCACC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYETCVT*LIFMST
Trigger: GGTGCTCATAAAGATTAATCATGTCACGCATGTTTC...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAACTATATTCTCTCTTCTaGTTTCCACAGGTAACAAGA +
Preference number: 4 (lower is better)
Translates to: FQICKVKKFCRLVVQQCELYSLF*FPQVTR
Trigger: TCTTGTTACCTGTGGAAATCAGAAGAGAGAATATAG...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369285.7
CDS-3UTR GCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAAAAAGTGAAAAAGTTCTaGAGATTGGTTGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: FQICKVKKFCRLVVQQCEKVKKF*RLVVQQ
Trigger: CTGTTGGACAACCAATCTGCAGAACTTTTTCACTTT...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR GCA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAATTGTGTTCATATGCTaGTTCTCAGTTTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEIVFIC*FSVSVL
Trigger: AAGAACAGAAACTGAGAAGCAGCATATGAACACAAT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTATATTTCATTACCATTaGTTCTTTTTCTTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSIFHYH*FFFLAC
Trigger: GCACGCCAAGAAAAAGAAGCAATGGTAATGAAATAT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTATTCTCTTTTCCTACTaGCTTCGATGTCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSILFSY*LRCLFV
Trigger: TACAAAAAGACATCGAAGGCAGTAGGAAAAGAGAAT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACAGGCATGCACCACCATaGCTGGATAATCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYRHAPP*LDNLLK
Trigger: TTTTAAAAGATTATCCAGGCATGGTGGTGCATGCCT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACAAACCAAACAAGGCTTaGTGCAATATCTGCATAAGA +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHKPNKA*CNICIR
Trigger: TCTTATGCAGATATTGCAGCAAGCCTTGTTTGGTTT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTTCAAATTCATTCTTCTaGCCAAACCTACCATTTTCA +
Preference number: 4 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSSNSFF*PNLPFS
Trigger: TGAAAATGGTAGGTTTGGGCAGAAGAATGAATTTGA...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCTGAAACATCACATTTaGGGGAACTGTATGATCACT +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYLKHHI*GNCMIT
Trigger: AGTGATCATACAGTTCCCCCAAATGTGATGTTTCAG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGTCTTCGTTTTACATCTaGGACTGTACTGCGTATTTT +
Preference number: 4 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKSSFYI*DCTAYF
Trigger: AAAATACGCAGTACAGTCCCAGATGTAAAACGAAGA...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369285.7
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACATCATAGGGGCTTTCTaGATAAGTCTTTTCATTAGC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYIIGAF*ISLFIS
Trigger: GCTAATGAAAAGACTTATTCAGAAAGCCCCTATGAT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACTCTACGAAGAGCTCCTaGTGCTTCTTATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYSTKSS*CFLFSL
Trigger: TAAAGAAAATAAGAAGCATCAGGAGCTCTTCGTAGA...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR TCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACGCATGTTTACGTCTCTaGGTTACTAACTCATCTTTT +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYACLRL*VTNSSF
Trigger: AAAAGATGAGTTAGTAACTCAGAGACGTAAACATGC...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAATGCCAGAAAACAAGTTaGATGAGTCTTCCTTTAATT +
Preference number: 4 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQCQKTS*MSLPLI
Trigger: AATTAAAGGAAGACTCATGCAACTTGTTTTCTGGCA...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR GCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACTTCTTTTTCTTGGCGTaGCTCTTCACATTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYFFFLA*LFTFLV
Trigger: AACAAGAAATGTGAAGAGGCACGCCAAGAAAAAGAA...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACAAAACTCACCCGATATaGTGGAGTGTAAAAATAAAC +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHKTHPI*WSVKIN
Trigger: GTTTATTTTTACACTCCAGCATATCGGGTGAGTTTT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACGTTTATAGTGCCATATaGTGGTTTCTTTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYVYSAI*WFLLEA
Trigger: AGCTTCCAAAAGAAACCAGCATATGGCACTATAAAC...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGCTTATTCATTCCATTTaGTACTCGATGTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKLIHSI*YSMFCK
Trigger: TTTGCAGAACATCGAGTACCAAATGGAATGAATAAG...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CCA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAACTTATTCATTCCATTTaGTACTCGATGTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: FQICKVKKFCRLVVQQCELIHSI*YSMFCK
Trigger: TTTGCAGAACATCGAGTACCAAATGGAATGAATAAG...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACCTTATTCATTCCATTTaGTACTCGATGTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHLIHSI*YSMFCK
Trigger: TTTGCAGAACATCGAGTACCAAATGGAATGAATAAG...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACTGTTCTAGTTCATGCTaGTGTTTAATAAGACGTTCT +
Preference number: 4 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHCSSSC*CLIRRS
Trigger: AGAACGTCTTATTAAACACCAGCATGAACTAGAACA...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACAGGCATAGGATACTATaGATCAGATCACTATTTGGT +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYRHRIL*IRSLFG
Trigger: ACCAAATAGTGATCTGATCCATAGTATCCTATGCCT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACATATTTCATTACCATTaGTTCTTTTTCTTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYIFHYH*FFFLAC
Trigger: GCACGCCAAGAAAAAGAAGCAATGGTAATGAAATAT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR GCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACTCAAATTCATTCTTCTaGCCAAACCTACCATTTTCA +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYSNSFF*PNLPFS
Trigger: TGAAAATGGTAGGTTTGGGCAGAAGAATGAATTTGA...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCTTATTCATTCCATTTaGTACTCGATGTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYLIHSI*YSMFCK
Trigger: TTTGCAGAACATCGAGTACCAAATGGAATGAATAAG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CCA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACTATGCTGGTTTCTTTTaGAAGCTGGTTCTTCATATT +
Preference number: 4 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYYAGFF*KLVLHI
Trigger: AATATGAAGAACCAGCTTCCAAAAGAAACCAGCATA...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS TCA 90 bp GCCGACGCCTCACTCAGCGGCCGTTTCCCCAAACCCCTGCGGAGCTaGCACATCAACAAAGATGGCGGCGACACTGAAGCCGGCCCGGTT +
Preference number: 5 (lower is better)
Translates to: ADASLSGRFPKPLRS*HINKDGGDTEAGPV
Trigger: AACCGGGCCGGCTTCAGTGTCGCCGCCATCTTTGTTGATGTGTCAGCTCCGCAGGGGTTTGGGGAAACGGCCGCTGAGTGAGGCGTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648613.1
CDS GCA 90 bp GAAACACAGCCGACGCCTCACTCAGCGGCCGTTTCCCCAAACCCCTaGGGAGCTGACACATCAACAAAGATGGCGGCGACACTGAAGCCG +
Preference number: 5 (lower is better)
Translates to: ETQPTPHSAAVSPNP*GADTSTKMAATLKP
Trigger: CGGCTTCAGTGTCGCCGCCATCTTTGTTGATGTGTCAGCTCCGCAGGGGTTTGGGGAAACGGCCGCTGAGTGAGGCGTCGGCTGTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648613.1
CDS-3UTR CAA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCACAGCAGGCATTTGTTaGGGGGTAATATCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSTAGIC*GVISRR
Trigger: CCTTCTTGATATTACCCCCAAACAAATGCCTGCTGT...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CAA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTTGTACACATGGGGTTTaGCCATGTTGCCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSCTHGV*PCCPGW
Trigger: CCAGCCAGGGCAACATGGCAAAACCCCATGTGTACA...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAATGTACACATGGGGTTTaGCCATGTTGCCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSECTHGV*PCCPGW
Trigger: CCAGCCAGGGCAACATGGCAAAACCCCATGTGTACA...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS TCA 90 bp AATCAACATGGCCTTATCTACTTGTGGAAAGTTATCCACAGCTACTaGGGACCCAGTATTTTCTGGAGATCGATCTTCTGCACTGCTTCG +
Preference number: 5 (lower is better)
Translates to: NQHGLIYLWKVIHSY*GPSIFWRSIFCTAS
Trigger: CGAAGCAGTGCAGAAGATCGATCTCCAGAAAATACTGGGTCCTCAGTAGCTGTGGATAACTTTCCACAAGTAGATAAGGCCATGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369287.8
ENST00000428953.1
ENST00000648613.1
CDS GCA 90 bp CTCACCTCTTACATATTTCATTACCATTGCTTCTTTTTCTTGGCGTaGCTCTTCACATTTCTTGTTGGCCTGTTCCATCCGTTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: LTSYIFHYHCFFFLA*LFTFLVGLFHPLGH
Trigger: ATGGCCCAACGGATGGAACAGGCCAACAAGAAATGTGAAGAGGCACGCCAAGAAAAAGAAGCAATGGTAATGAAATATGTAAGAGGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGCCTCTTCACATTTCTaGTTGGCCTGTTCCATCCGT +
Preference number: 5 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSASSHF*LACSIR
Trigger: ACGGATGGAACAGGCCAACAAGAAATGTGAAGAGGC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCACCGGGCATGTGCTTTTaGCAGCCTAACTATTCTCTC +
Preference number: 5 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSPGMCF*QPNYSL
Trigger: GAGAGAATAGTTAGGCTGCAAAAAGCACATGCCCGG...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGAAAGTAGAATGGTGGTaGCCAGGGACTGAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKKVEWW*PGTEGK
Trigger: CTTGCCCTCAGTCCCTGGCAACCACCATTCTACTTT...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CAA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGTAGAATGGTGGTaGCCAGGGACTGAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQKVEWW*PGTEGK
Trigger: CTTGCCCTCAGTCCCTGGCAACCACCATTCTACTTT...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATCTTCACATTTCTTGTaGGCCTGTTCCATCCGTTGG +
Preference number: 5 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSSSHFL*ACSIRW
Trigger: CCAACGGATGGAACAGGCCAACAAGAAATGTGAAGA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATTCAGCTTGCAGAGTTaGGACTTCCTCTTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSFSLQS*DFLFSQ
Trigger: CTGCGAAAAGAGGAAGTCCAAACTCTGCAAGCTGAA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AAGAAGGGCCTTGGAGTCTTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCAATTTGCTGCTTTCATaGCCAGAAAACAAGTTGCAT +
Preference number: 5 (lower is better)
Translates to: KKGLGVLKRYLQTQVHSSNLLLS*PENKLH
Trigger: ATGCAACTTGTTTTCTGGCAATGAAAGCAGCAAATT...GCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAATCTTCACATTTCTTGTaGGCCTGTTCCATCCGTTGG +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSESSHFL*ACSIRW
Trigger: CCAACGGATGGAACAGGCCAACAAGAAATGTGAAGA...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACGCCTCTTCACATTTCTaGTTGGCCTGTTCCATCCGT +
Preference number: 5 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHASSHF*LACSIR
Trigger: ACGGATGGAACAGGCCAACAAGAAATGTGAAGAGGC...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCATCGTGCTTGCTGAAGTaGTTTGGTGAGATCCTTGAT +
Preference number: 5 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSSCLLK*FGEILD
Trigger: ATCAAGGATCTCACCAAACAACTTCAGCAAGCACGA...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGCCTGTAATTTTCGGTaGATTTCCAAAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSACNFR*ISKESS
Trigger: GGAGCTCTCTTTGGAAATCAACCGAAAATTACAGGC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACGCTTTCAGCGTACCTTaGCAAGGATGTTCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHAFSVP*QGCSKA
Trigger: GGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGC...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCACAGGAAAACAGCAATTaGCTTTCAGCGTACCTTTGC +
Preference number: 5 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSQENSN*LSAYLC
Trigger: GCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCTG...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS CCA 90 bp GCCTGTGTCTGTTTTGGCACAAGAATCCTCACCTCCACCATGATCTaGAATATAATTTTCCTGGGCTTCAATTCGATTATTATGCTCATT +
Preference number: 5 (lower is better)
Translates to: ACVCFGTRILTSTMI*NIIFLGFNSIIMLI
Trigger: AATGAGCATAATAATCGAATTGAAGCCCAGGAAAATTATATTCCAGATCATGGTGGAGGTGAGGATTCTTGTGCCAAAACAGACACAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369285.7
ENST00000369286.1
ENST00000369287.8
ENST00000648613.1
CDS CCA 90 bp TTGATTTCCAAAGAGAGCTCCAATGTTAATCCATTGTCAGCTGGATaGGATGTATATAAAGATGCCATGATGCCACCCCGTCTACTTAAA +
Preference number: 5 (lower is better)
Translates to: LISKESSNVNPLSAG*DVYKDAMMPPRLLK
Trigger: TTTAAGTAGACGGGGTGGCATCATGGCATCTTTATATACATCCCATCCAGCTGACAATGGATTAACATTGGAGCTCTCTTTGGAAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGAAGGGCCTTGGAGTCTaGAAGAGATACTTGCAAACC +
Preference number: 5 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKKGLGV*KRYLQT
Trigger: GGTTTGCAAGTATCTCTTCAAGACTCCAAGGCCCTT...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CAA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCATATTTCATTACCATaGCTTCTTTTTCTTGGCGTG +
Preference number: 5 (lower is better)
Translates to: RKTAICFQRTFARMFQSLHISLP*LLFLGV
Trigger: CACGCCAAGAAAAAGAAGCAATGGTAATGAAATATG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCTCTTTGAGTTTATCTTaGGTTTCCTTGTGTGAATCC +
Preference number: 5 (lower is better)
Translates to: RKTAICFQRTFARMFQSLSLSLS*VSLCES
Trigger: GGATTCACACAAGGAAACCAAAGATAAACTCAAAGA...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AGGAAAACAGCAATTTGCTTTCAGCGTACCTTTGCAAGGATGTTCCAAAGCCTCCTAGACATTTCACCTTaGTTCTCAGTGTTCTTAACT +
Preference number: 5 (lower is better)
Translates to: RKTAICFQRTFARMFQSLLDISP*FSVFLT
Trigger: AGTTAAGAACACTGAGAACAAAGGTGAAATGTCTAG...GAGGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAATCGTGCTTGCTGAAGTaGTTTGGTGAGATCCTTGAT +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSESCLLK*FGEILD
Trigger: ATCAAGGATCTCACCAAACAACTTCAGCAAGCACGA...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACATGGCCTTATCTACTaGTGGAAAGTTATCCACAGC +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEHGLIY*WKVIHS
Trigger: GCTGTGGATAACTTTCCACAAGTAGATAAGGCCATG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCCGGGCATGTGCTTTTaGCAGCCTAACTATTCTCTC +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYPGMCF*QPNYSL
Trigger: GAGAGAATAGTTAGGCTGCAAAAAGCACATGCCCGG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAAATTTCTTCCACCAGTaGTTTGATGTGGTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSNFFHQ*FDVVLH
Trigger: ATGGAGGACCACATCAAACAACTGGTGGAAGAAATT...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAGCCTGTAATTTTCGGTaGATTTCCAAAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEACNFR*ISKESS
Trigger: GGAGCTCTCTTTGGAAATCAACCGAAAATTACAGGC...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACGCTTTCAGCGTACCTTaGCAAGGATGTTCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYAFSVP*QGCSKA
Trigger: GGCTTTGGAACATCCTTGCAAAGGTACGCTGAAAGC...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAAAGCAACAGCAGGCATTaGTTTGGGGGTAATATCAAG +
Preference number: 5 (lower is better)
Translates to: FQICKVKKFCRLVVQQCESNSRH*FGGNIK
Trigger: CTTGATATTACCCCCAAACAAATGCCTGCTGTTGCT...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACATTGCTTCTTTTTCTaGGCGTGCCTCTTCACATTT +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEHCFFF*ACLFTF
Trigger: AAATGTGAAGAGGCACGCCAAGAAAAAGAAGCAATG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACTTCAGCTTGCAGAGTTaGGACTTCCTCTTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYFSLQS*DFLFSQ
Trigger: CTGCGAAAAGAGGAAGTCCAAACTCTGCAAGCTGAA...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACCATGGCCTTATCTACTaGTGGAAAGTTATCCACAGC +
Preference number: 5 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHHGLIY*WKVIHS
Trigger: GCTGTGGATAACTTTCCACAAGTAGATAAGGCCATG...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTTCCAATGTTAATCCATaGTCAGCTGGATGGGATGTA +
Preference number: 5 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSSNVNP*SAGWDV
Trigger: TACATCCCATCCAGCTGACAATGGATTAACATTGGA...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAACTGAAACATCACATTaGGGGGAACTGTATGATCAC +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSETETSH*GELYDH
Trigger: GTGATCATACAGTTCCCCCAAATGTGATGTTTCAGT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAACAAACCAAACAAGGCTaGCTGCAATATCTGCATAAG +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEQTKQG*LQYLHK
Trigger: CTTATGCAGATATTGCAGCAAGCCTTGTTTGGTTTG...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTCAAACCAAACAAGGCTaGCTGCAATATCTGCATAAG +
Preference number: 5 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSQTKQG*LQYLHK
Trigger: CTTATGCAGATATTGCAGCAAGCCTTGTTTGGTTTG...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS TCA 90 bp AATTGTTATGTCTGGGTAATTTATAACTTTCTGGGGTCTGTTTCTTaGAACCCAGGTGAAGAGTTAAGTCGCAACGATTTCCAAGTCAGA +
Preference number: 5 (lower is better)
Translates to: NCYVWVIYNFLGSVS*NPGEELSRNDFQVR
Trigger: TCTGACTTGGAAATCGTTGCGACTTAACTCTTCACCTGGGTTTCAAGAAACAGACCCCAGAAAGTTATAAATTACCCAGACATAACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497592.1
CDS-3UTR CAA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGGTCTTGAAGAGATACTaGCAAACCCAAGTTCACAGT +
Preference number: 5 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKVLKRY*QTQVHS
Trigger: ACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGAC...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CAA 90 bp TTTCAGATTTGCAAAGTGAAAAAGTTCTGCAGATTGGTTGTCCAACAGTGTGAAGTCTTGAAGAGATACTaGCAAACCCAAGTTCACAGT +
Preference number: 5 (lower is better)
Translates to: FQICKVKKFCRLVVQQCEVLKRY*QTQVHS
Trigger: ACTGTGAACTTGGGTTTGCAAGTATCTCTTCAAGAC...TTCACACTGTTGGACAACCAATCTGCAGAACTTTTTCACTTTGCAAATCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CAA 90 bp AACAGGCTAAAGTCTGAAGTGGTATGGGGAAAATGGAGTCATGGCAAATATTCAGATCTGCTTCTTCCTTaGCTTGTGTTAATTTTGTTG +
Preference number: 5 (lower is better)
Translates to: NRLKSEVVWGKWSHGKYSDLLLP*LVLILL
Trigger: CAACAAAATTAACACAAGCAAAGGAAGAAGCAGATC...TGAATATTTGCCATGACTCCATTTTCCCCATACCACTTCAGACTTTAGCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAATGTTTGGTGAGATCCTaGATACTAGAGGCATGTTTA +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSECLVRS*ILEACL
Trigger: TAAACATGCCTCTAGTATCAAGGATCTCACCAAACA...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACACTGAAACATCACATTaGGGGGAACTGTATGATCAC +
Preference number: 5 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHTETSH*GELYDH
Trigger: GTGATCATACAGTTCCCCCAAATGTGATGTTTCAGT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCAGGAAAACAGCAATTaGCTTTCAGCGTACCTTTGC +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYQENSN*LSAYLC
Trigger: GCAAAGGTACGCTGAAAGCAAATTGCTGTTTTCCTG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS TCA 90 bp AGTTGTTTGGTGAGATCCTTGATACTAGAGGCATGTTTACGTCTCTaGGTTACTAACTCATCTTTTAATTCTTCTACCTGGGTACTCAAT +
Preference number: 5 (lower is better)
Translates to: SCLVRSLILEACLRL*VTNSSFNSSTWVLN
Trigger: ATTGAGTACCCAGGTAGAAGAATTAAAAGATGAGTTAGTAACTCAGAGACGTAAACATGCCTCTAGTATCAAGGATCTCACCAAACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369287.8
ENST00000428953.1
ENST00000490661.1
ENST00000497592.1
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAAATTTGCTGCTTTCATaGCCAGAAAACAAGTTGCAT +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSENLLLS*PENKLH
Trigger: ATGCAACTTGTTTTCTGGCAATGAAAGCAGCAAATT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTAATTTGCTGCTTTCATaGCCAGAAAACAAGTTGCAT +
Preference number: 5 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSNLLLS*PENKLH
Trigger: ATGCAACTTGTTTTCTGGCAATGAAAGCAGCAAATT...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TTGAAGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAACCTTATTCATTCCATTaGGTACTCGATGTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: LKRYLQTQVHSSIINNSQPYSFH*VLDVLQ
Trigger: TTGCAGAACATCGAGTACCAAATGGAATGAATAAGG...TTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CAA 90 bp TCTTCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTCTAGACATTTCACCTTaGTTCTCAGTGTTCTTAACT +
Preference number: 5 (lower is better)
Translates to: SSAQTYHFQSLKLNRLKSLDISP*FSVFLT
Trigger: AGTTAAGAACACTGAGAACAAAGGTGAAATGTCTAG...AGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACAATTTCTTCCACCAGTaGTTTGATGTGGTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYNFFHQ*FDVVLH
Trigger: ATGGAGGACCACATCAAACAACTGGTGGAAGAAATT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACTCCAATGTTAATCCATaGTCAGCTGGATGGGATGTA +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYSNVNP*SAGWDV
Trigger: TACATCCCATCCAGCTGACAATGGATTAACATTGGA...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTGCCCAAACCTACCATTTTCAGTCCTTAAAACTAAACAGGCTAAAGTCTGAAAAACAAGTTTCATCATaGCAGTCAAAATGGATAGCG +
Preference number: 5 (lower is better)
Translates to: SAQTYHFQSLKLNRLKSEKQVSS*QSKWIA
Trigger: CGCTATCCATTTTGACTGCAATGATGAAACTTGTTT...TTCAGACTTTAGCCTGTTTAGTTTTAAGGACTGAAAATGGTAGGTTTGGGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp AGAGATACTTGCAAACCCAAGTTCACAGTAGCATTATTAACAACAGCCAAAAAGAATTTGCTGCTTTCATaGCCAGAAAACAAGTTGCAT +
Preference number: 5 (lower is better)
Translates to: RDTCKPKFTVALLTTAKKNLLLS*PENKLH
Trigger: ATGCAACTTGTTTTCTGGCAATGAAAGCAGCAAATT...CTTTTTGGCTGTTGTTAATAATGCTACTGTGAACTTGGGTTTGCAAGTATCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369285.7
ENST00000369286.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACTGTTTGGTGAGATCCTaGATACTAGAGGCATGTTTA +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYCLVRS*ILEACL
Trigger: TAAACATGCCTCTAGTATCAAGGATCTCACCAAACA...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp TCTCTGATACATGTAATTACTTTGCTCAGTCCTGATCCATATACAAAAGCACACATATGCTGGTTTCTTTaGGAAGCTGGTTCTTCATAT +
Preference number: 5 (lower is better)
Translates to: SLIHVITLLSPDPYTKAHICWFL*EAGSSY
Trigger: ATATGAAGAACCAGCTTCCAAAAGAAACCAGCATAT...GTGTGCTTTTGTATATGGATCAGGACTGAGCAAAGTAATTACATGTATCAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACCATATTTCATTACCATaGCTTCTTTTTCTTGGCGTG +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYHISLP*LLFLGV
Trigger: CACGCCAAGAAAAAGAAGCAATGGTAATGAAATATG...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACTCTTTGAGTTTATCTTaGGTTTCCTTGTGTGAATCC +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYSLSLS*VSLCES
Trigger: GGATTCACACAAGGAAACCAAAGATAAACTCAAAGA...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACGATCTGCTTCTTCCTTaGCTTGTGTTAATTTTGTTG +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYDLLLP*LVLILL
Trigger: CAACAAAATTAACACAAGCAAAGGAAGAAGCAGATC...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACATATGCTGGTTTCTTTaGGAAGCTGGTTCTTCATAT +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYICWFL*EAGSSY
Trigger: ATATGAAGAACCAGCTTCCAAAAGAAACCAGCATAT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS-3UTR CAA 90 bp ACAAGCAAATTAAGTTGTTTAGATTCAATGACAGGCTGTCATATTGCACCATACAAACAAGTTTCATCATaGCAGTCAAAATGGATAGCG +
Preference number: 5 (lower is better)
Translates to: TSKLSCLDSMTGCHIAPYKQVSS*QSKWIA
Trigger: CGCTATCCATTTTGACTGCAATGATGAAACTTGTTT...GTATGGTGCAATATGACAGCCTGTCATTGAATCTAAACAACTTAATTTGCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS GCA 72 bp CCGACGCCTCACTCAGCGGCCGTTTCCCCAAACCCCTaGGGAGCTGACACATCAACAAAGATGGCGGCGACA +
Preference number: 6 (lower is better)
Translates to: PTPHSAAVSPNP*GADTSTKMAAT
Trigger: TGTCGCCGCCATCTTTGTTGATGTGTCAGCTCCGCAGGGGTTTGGGGAAACGGCCGCTGAGTGAGGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369286.1
ENST00000648613.1
CDS TCA 72 bp GTCCAACCAGCCAAGAGTGGGAGGAAAAGACCGCGGTaGGAAACACAGCCGACGCCTCACTCAGCGGCCGTT +
Preference number: 6 (lower is better)
Translates to: VQPAKSGRKRPR*ETQPTPHSAAV
Trigger: AACGGCCGCTGAGTGAGGCGTCGGCTGTGTTTCTCACCGCGGTCTTTTCCTCCCACTCTTGGCTGGTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369285.7
ENST00000369286.1
ENST00000369287.8
ENST00000648613.1
CDS TCA 72 bp TCACTCAGCGGCCGTTTCCCCAAACCCCTGCGGAGCTaGCACATCAACAAAGATGGCGGCGACACTGAAGCC +
Preference number: 6 (lower is better)
Translates to: SLSGRFPKPLRS*HINKDGGDTEA
Trigger: GGCTTCAGTGTCGCCGCCATCTTTGTTGATGTGTCAGCTCCGCAGGGGTTTGGGGAAACGGCCGCTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648613.1
CDS TCA 72 bp GGCCTTATCTACTTGTGGAAAGTTATCCACAGCTACTaGGGACCCAGTATTTTCTGGAGATCGATCTTCTGC +
Preference number: 6 (lower is better)
Translates to: GLIYLWKVIHSY*GPSIFWRSIFC
Trigger: GCAGAAGATCGATCTCCAGAAAATACTGGGTCCTCAGTAGCTGTGGATAACTTTCCACAAGTAGATAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369287.8
ENST00000428953.1
ENST00000648613.1
CDS GCA 72 bp GCTTTAACTTCTGTTTGTCTACAAGCGAGTTCAGCTTaGAGAGTTTGGACTTCCTCTTTTCGCAGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: ALTSVCLQASSA*RVWTSSFRSSS
Trigger: GGAAGAACTGCGAAAAGAGGAAGTCCAAACTCTGCAAGCTGAACTCGCTTGTAGACAAACAGAAGTTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369287.8
ENST00000428953.1
ENST00000490661.1
ENST00000497592.1
ENST00000648613.1
CDS CCA 72 bp AAAGAGAGCTCCAATGTTAATCCATTGTCAGCTGGATaGGATGTATATAAAGATGCCATGATGCCACCCCGT +
Preference number: 6 (lower is better)
Translates to: KESSNVNPLSAG*DVYKDAMMPPR
Trigger: ACGGGGTGGCATCATGGCATCTTTATATACATCCCATCCAGCTGACAATGGATTAACATTGGAGCTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS CAA 90 bp TTCCTTCTCACCTCTTACATATTTCATTACCATTGCTTCTTTTTCTaGGCGTGCCTCTTCACATTTCTTGTTGGCCTGTTCCATCCGTTG +
Preference number: 6 (lower is better)
Translates to: FLLTSYIFHYHCFFF*ACLFTFLVGLFHPL
Trigger: CAACGGATGGAACAGGCCAACAAGAAATGTGAAGAGGCACGCCAAGAAAAAGAAGCAATGGTAATGAAATATGTAAGAGGTGAGAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS TCA 72 bp GTCTGGGTAATTTATAACTTTCTGGGGTCTGTTTCTTaGAACCCAGGTGAAGAGTTAAGTCGCAACGATTTC +
Preference number: 6 (lower is better)
Translates to: VWVIYNFLGSVS*NPGEELSRNDF
Trigger: GAAATCGTTGCGACTTAACTCTTCACCTGGGTTTCAAGAAACAGACCCCAGAAAGTTATAAATTACCCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497592.1
CDS CAA 90 bp CACATTCATGGTCTAAGTGTGGAAGAATTTTATACCTTGCTGAAGTaGTTTGGTGAGATCCTTGATACTAGAGGCATGTTTACGTCTCTG +
Preference number: 6 (lower is better)
Translates to: HIHGLSVEEFYTLLK*FGEILDTRGMFTSL
Trigger: CAGAGACGTAAACATGCCTCTAGTATCAAGGATCTCACCAAACAACTTCAGCAAGGTATAAAATTCTTCCACACTTAGACCATGAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490661.1
CDS TCA 72 bp GTGAGATCCTTGATACTAGAGGCATGTTTACGTCTCTaGGTTACTAACTCATCTTTTAATTCTTCTACCTGG +
Preference number: 6 (lower is better)
Translates to: VRSLILEACLRL*VTNSSFNSSTW
Trigger: CCAGGTAGAAGAATTAAAAGATGAGTTAGTAACTCAGAGACGTAAACATGCCTCTAGTATCAAGGATCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369287.8
ENST00000428953.1
ENST00000490661.1
ENST00000497592.1
ENST00000648613.1
CDS TCA 72 bp GTAACGTATCCTCCAAAACAGCCTGTAATTTTCGGTTaGTTTCCAAAGAGAGCTCCAATGTTAATCCATTGT +
Preference number: 6 (lower is better)
Translates to: VTYPPKQPVIFG*FPKRAPMLIHC
Trigger: ACAATGGATTAACATTGGAGCTCTCTTTGGAAATCAACCGAAAATTACAGGCTGTTTTGGAGGATACGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS CAA 72 bp AGTAACGTATCCTCCAAAACAGCCTGTAATTTTCGGTaGATTTCCAAAGAGAGCTCCAATGTTAATCCATTG +
Preference number: 6 (lower is better)
Translates to: SNVSSKTACNFR*ISKESSNVNPL
Trigger: CAATGGATTAACATTGGAGCTCTCTTTGGAAATCAACCGAAAATTACAGGCTGTTTTGGAGGATACGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369287.8
ENST00000648613.1
CDS CAA 72 bp CACATTCATGGTCTAAGTGTGGAAGAATTTTATACCTaGCTGAAGTTGTTTGGTGAGATCCTTGATACTAGA +
Preference number: 6 (lower is better)
Translates to: HIHGLSVEEFYT*LKLFGEILDTR
Trigger: TCTAGTATCAAGGATCTCACCAAACAACTTCAGCAAGGTATAAAATTCTTCCACACTTAGACCATGAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490661.1
CDS CAA 90 bp AGAAACAAACACATTCATGGTCTAAGTGTGGAAGAATTTTATACCTaGCTGAAGTTGTTTGGTGAGATCCTTGATACTAGAGGCATGTTT +
Preference number: 6 (lower is better)
Translates to: RNKHIHGLSVEEFYT*LKLFGEILDTRGMF
Trigger: AAACATGCCTCTAGTATCAAGGATCTCACCAAACAACTTCAGCAAGGTATAAAATTCTTCCACACTTAGACCATGAATGTGTTTGTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490661.1