Pregenerated sensors for CCDC182 (Homo sapiens)
Ensembl gene IDs: ENSG00000166329Ensembl transcript IDs: ENST00000299415.3
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGTACTGGGGTGCCTCCTTCCTTAAATCTTCAACTTGGTaGTTGGCTAGTGCCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: SSSESYRGLTQYWGASFLKSSTW*LASATH Trigger: GTGGGTGGCACTAGCCAAGCACCAAGTTGAAGATTT...AAGGAAGGAGGCACCCCAGTACTGAGTCAGGCCCCTGTAACTTTCACTTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| 3UTR-3UTR CCA 90 bp | AGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATGGAATTTCACCAAACTTCAACTTGGTGCTTaGCTAGTGCCACCCACGAGG | + |
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Preference number: 2 (lower is better) Translates to: STGVPPSFRMLDKWNFTKLQLGA*LVPPTR Trigger: CCTCGTGGGTGGCACTAGCCAAGCACCAAGTTGAAG...TTTGGTGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| 3UTR-3UTR GCA 90 bp | TACCATTACAAACAGGAAAACAGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGATATTGAAGTCTTTTTaGCTCTCAGCAAGGTGTTAT | + |
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Preference number: 2 (lower is better) Translates to: YHYKQENSSSESYRGLTQILKSF*LSARCY Trigger: ATAACACCTTGCTGAGAGGCAAAAAGACTTCAATAT...CTGAGTCAGGCCCCTGTAACTTTCACTTGAACTGTTTTCCTGTTTGTAATGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| 3UTR-3UTR CAA 90 bp | AGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGTACTGGGGTGCCTCCTTCCTTCAAGGGGGTAGGGACTaGGGGTTTCTCCTTCCGTTA | + |
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Preference number: 3 (lower is better) Translates to: SSSESYRGLTQYWGASFLQGGRD*GFLLPL Trigger: TAACGGAAGGAGAAACCCCAAGTCCCTACCCCCTTG...AAGGAAGGAGGCACCCCAGTACTGAGTCAGGCCCCTGTAACTTTCACTTGAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| 3UTR-3UTR CAA 90 bp | AGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATGGAATTTCACCAAATCTTCAACTTGGTGCTaGGCTAGTGCCACCCACGAG | + |
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Preference number: 3 (lower is better) Translates to: STGVPPSFRMLDKWNFTKSSTWC*ASATHE Trigger: CTCGTGGGTGGCACTAGCCAAGCACCAAGTTGAAGA...TTTGGTGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| 3UTR-3UTR CAA 90 bp | AAGAGGTATACATTGAGCAATAGTACCATTACAAACAGGAAAACAGTTCAAGTGAATATTGAAGTCTTTTaGCCTCTCAGCAAGGTGTTA | + |
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Preference number: 3 (lower is better) Translates to: KRYTLSNSTITNRKTVQVNIEVF*PLSKVL Trigger: TAACACCTTGCTGAGAGGCAAAAAGACTTCAATATT...CACTTGAACTGTTTTCCTGTTTGTAATGGTACTATTGCTCAATGTATACCTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | AGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGTACTGGGGTGCCTCCTTCCTTTCCTCCCTTAGCCGCTaGCTCACGCGAGCCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SSSESYRGLTQYWGASFLSSLSR*LTRAAC Trigger: GCAGGCGGCTCGCGTGAGGCAGCGGCTAAGGGAGGA...AAGGAAGGAGGCACCCCAGTACTGAGTCAGGCCCCTGTAACTTTCACTTGAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | CAGGGGCCTGACTCAGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATTCCTCCAGTTCCCGTTaGACCCCGGCCACCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: QGPDSVLGCLLPLECWINSSSSR*TPATFC Trigger: GCAGAAGGTGGCCGGGGTGCAACGGGAACTGGAGGA...ATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACTGAGTCAGGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | AGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGTACTGGGGTGCCTCCTTCCTTCCTTGTTGCGCACGATaGCACGGTCCTCCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SSSESYRGLTQYWGASFLPCCAR*HGPPPP Trigger: GGGAGGAGGAGGACCGTGGCATCGTGCGCAACAAGG...AAGGAAGGAGGCACCCCAGTACTGAGTCAGGCCCCTGTAACTTTCACTTGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR TCA 90 bp | AGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGTACTGGGGTGCCTCCTTCCTTGCGGCAACAGGAAGGTaGGAACCTTGTTGCGCACGA | + |
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Preference number: 4 (lower is better) Translates to: SSSESYRGLTQYWGASFLAATGR*EPCCAR Trigger: TCGTGCGCAACAAGGTTCTCACCTTCCTGTTGCCGC...AAGGAAGGAGGCACCCCAGTACTGAGTCAGGCCCCTGTAACTTTCACTTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CCA 90 bp | TACCATTACAAACAGGAAAACAGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGCTCCAAGTCAGCGGGTaGTGGGAGGCAGGAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: YHYKQENSSSESYRGLTQLQVSG*WEAGGP Trigger: TGGCCCTCCTGCCTCCCACCACCCGCTGACTTGGAG...CTGAGTCAGGCCCCTGTAACTTTCACTTGAACTGTTTTCCTGTTTGTAATGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CCA 90 bp | AGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATGGAATTTCACCAAACCTGGCTCTTCTTGGTaGCACGCAGGGCGTCACGTC | + |
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Preference number: 4 (lower is better) Translates to: STGVPPSFRMLDKWNFTKPGSSW*HAGRHV Trigger: GACGTGACGCCCTGCGTGCCACCAAGAAGAGCCAGG...TTTGGTGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CCA 90 bp | AGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATGGAATTTCACCAAACAGCCTGGCTCTTCTTaGTGGCACGCAGGGCGTCAC | + |
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Preference number: 4 (lower is better) Translates to: STGVPPSFRMLDKWNFTKQPGSS*WHAGRH Trigger: GTGACGCCCTGCGTGCCACCAAGAAGAGCCAGGCTG...TTTGGTGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | TACCATTACAAACAGGAAAACAGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGTCCAGCCGCTTGCAGTaGTCCCGGAGCTGTTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: YHYKQENSSSESYRGLTQSSRLQ*SRSCFS Trigger: CGAGAAACAGCTCCGGGAGCACTGCAAGCGGCTGGA...CTGAGTCAGGCCCCTGTAACTTTCACTTGAACTGTTTTCCTGTTTGTAATGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | CAGGGGCCTGACTCAGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATAAATCTTCAACTTGGTaGTTGGCTAGTGCCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: QGPDSVLGCLLPLECWINKSSTW*LASATH Trigger: GTGGGTGGCACTAGCCAAGCACCAAGTTGAAGATTT...ATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACTGAGTCAGGCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CCA 90 bp | AGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATGGAATTTCACCAAAGAGGTTCAGTCAGCCTaGCTCTTCTTGGTGGCACGC | + |
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Preference number: 4 (lower is better) Translates to: STGVPPSFRMLDKWNFTKEVQSA*LFLVAR Trigger: GCGTGCCACCAAGAAGAGCCAGGCTGACTGAACCTC...TTTGGTGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | AAGAGGTATACATTGAGCAATAGTACCATTACAAACAGGAAAACAGTTCAAGTGCTCACGCGAGCCGCCTaGTCCTCCTGTTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: KRYTLSNSTITNRKTVQVLTRAA*SSCCTR Trigger: CCTGGTGCAACAGGAGGAGCAGGCGGCTCGCGTGAG...CACTTGAACTGTTTTCCTGTTTGTAATGGTACTATTGCTCAATGTATACCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | AAGAGGTATACATTGAGCAATAGTACCATTACAAACAGGAAAACAGTTCAAGTGGGTCCTCCAGCCGCTTaGAGTGCTCCCGGAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: KRYTLSNSTITNRKTVQVGPPAA*SAPGAV Trigger: AACAGCTCCGGGAGCACTGCAAGCGGCTGGAGGACC...CACTTGAACTGTTTTCCTGTTTGTAATGGTACTATTGCTCAATGTATACCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR TCA 90 bp | TCAGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATGGAATTTCACCAGGAAAACAGTTCAAGTaGAAGTTACAGGGGCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: SVLGCLLPLECWINGISPGKQFK*KLQGPD Trigger: GTCAGGCCCCTGTAACTTTCACTTGAACTGTTTTCC...TGGTGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | AAGAGGTATACATTGAGCAATAGTACCATTACAAACAGGAAAACAGTTCAAGTGCCGGCCACCTTCTGCTaGAGGATCTCCAAGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: KRYTLSNSTITNRKTVQVPATFC*RISKSA Trigger: CGCTGACTTGGAGATCCTGCAGCAGAAGGTGGCCGG...CACTTGAACTGTTTTCCTGTTTGTAATGGTACTATTGCTCAATGTATACCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | TACCATTACAAACAGGAAAACAGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGGACTCAGTACTGGGGTaGCTCCTTCCTTTAGAATGC | + |
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Preference number: 4 (lower is better) Translates to: YHYKQENSSSESYRGLTQDSVLG*LLPLEC Trigger: GCATTCTAAAGGAAGGAGGCACCCCAGTACTGAGTC...CTGAGTCAGGCCCCTGTAACTTTCACTTGAACTGTTTTCCTGTTTGTAATGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | AAGAGGTATACATTGAGCAATAGTACCATTACAAACAGGAAAACAGTTCAAGTGACCCCGGCCACCTTCTaGTGCAGGATCTCCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: KRYTLSNSTITNRKTVQVTPATF*CRISKS Trigger: TGACTTGGAGATCCTGCAGCAGAAGGTGGCCGGGGT...CACTTGAACTGTTTTCCTGTTTGTAATGGTACTATTGCTCAATGTATACCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | CAGGGGCCTGACTCAGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATCTCCTTCCTTTAGAATaGTGGATAAATGGAATTTCA | + |
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Preference number: 4 (lower is better) Translates to: QGPDSVLGCLLPLECWINLLPLE*WINGIS Trigger: TGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAG...ATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACTGAGTCAGGCCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CCA 90 bp | TCAGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATGGAATTTCACCAGAAAAGTCTCCAGACTaGAGGCCACTCTCTATCATT | + |
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Preference number: 4 (lower is better) Translates to: SVLGCLLPLECWINGISPEKSPD*RPLSII Trigger: AATGATAGAGAGTGGCCTCCAGTCTGGAGACTTTTC...TGGTGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR TCA 90 bp | AAGAGGTATACATTGAGCAATAGTACCATTACAAACAGGAAAACAGTTCAAGTGGGGTATTCACCGTCATaGGAATGGACCCAGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KRYTLSNSTITNRKTVQVGYSPS*EWTQPG Trigger: ACCAGGCTGGGTCCATTCTCATGACGGTGAATACCC...CACTTGAACTGTTTTCCTGTTTGTAATGGTACTATTGCTCAATGTATACCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CCA 90 bp | TACCATTACAAACAGGAAAACAGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGCTTCAAGGTAATGAATaGACTTCAATGCCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: YHYKQENSSSESYRGLTQLQGNE*TSMPLS Trigger: AGAAAGAGGCATTGAAGTCCATTCATTACCTTGAAG...CTGAGTCAGGCCCCTGTAACTTTCACTTGAACTGTTTTCCTGTTTGTAATGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR GCA 90 bp | AAGAGGTATACATTGAGCAATAGTACCATTACAAACAGGAAAACAGTTCAAGTGATATTGAAGTCTTTTTaGCTCTCAGCAAGGTGTTAT | + |
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Preference number: 4 (lower is better) Translates to: KRYTLSNSTITNRKTVQVILKSF*LSARCY Trigger: ATAACACCTTGCTGAGAGGCAAAAAGACTTCAATAT...CACTTGAACTGTTTTCCTGTTTGTAATGGTACTATTGCTCAATGTATACCTCTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS GCA 90 bp | CCACGGTCCTCCTCCTCCCTTAGCCGCTGCCTCACGCGAGCCGCCTaGTCCTCCTGTTGCACCAGGGCTCCATTCATCTCGCAGAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: PRSSSSLSRCLTRAA*SSCCTRAPFISQKA Trigger: CGCCTTCTGCGAGATGAATGGAGCCCTGGTGCAACAGGAGGAGCAGGCGGCTCGCGTGAGGCAGCGGCTAAGGGAGGAGGAGGACCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS GCA 90 bp | ACCTTGTTGCGCACGATGCCACGGTCCTCCTCCTCCCTTAGCCGCTaGCTCACGCGAGCCGCCTGCTCCTCCTGTTGCACCAGGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: TLLRTMPRSSSSLSR*LTRAACSSCCTRAP Trigger: TGGAGCCCTGGTGCAACAGGAGGAGCAGGCGGCTCGCGTGAGGCAGCGGCTAAGGGAGGAGGAGGACCGTGGCATCGTGCGCAACAAGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS GCA 90 bp | GCGTCACGTCCCCTGTCCAGCAGCAGGTCCTCCAGCCGCTTGCAGTaGTCCCGGAGCTGTTTCTCGCGCGGCAACAGGAAGGTGAGAACC | + |
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Preference number: 5 (lower is better) Translates to: ASRPLSSSRSSSRLQ*SRSCFSRGNRKVRT Trigger: GGTTCTCACCTTCCTGTTGCCGCGCGAGAAACAGCTCCGGGAGCACTGCAAGCGGCTGGAGGACCTGCTGCTGGACAGGGGACGTGACGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CCA 90 bp | TGGCTAGTGCCACCCACGAGGTTCAGTCAGCCTGGCTCTTCTTGGTaGCACGCAGGGCGTCACGTCCCCTGTCCAGCAGCAGGTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: WLVPPTRFSQPGSSW*HAGRHVPCPAAGPP Trigger: TGGAGGACCTGCTGCTGGACAGGGGACGTGACGCCCTGCGTGCCACCAAGAAGAGCCAGGCTGACTGAACCTCGTGGGTGGCACTAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CCA 90 bp | GCTTGGCTAGTGCCACCCACGAGGTTCAGTCAGCCTGGCTCTTCTTaGTGGCACGCAGGGCGTCACGTCCCCTGTCCAGCAGCAGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: AWLVPPTRFSQPGSS*WHAGRHVPCPAAGP Trigger: AGGACCTGCTGCTGGACAGGGGACGTGACGCCCTGCGTGCCACCAAGAAGAGCCAGGCTGACTGAACCTCGTGGGTGGCACTAGCCAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CCA 90 bp | TCAACTTGGTGCTTGGCTAGTGCCACCCACGAGGTTCAGTCAGCCTaGCTCTTCTTGGTGGCACGCAGGGCGTCACGTCCCCTGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: STWCLASATHEVQSA*LFLVARRASRPLSS Trigger: GCTGGACAGGGGACGTGACGCCCTGCGTGCCACCAAGAAGAGCCAGGCTGACTGAACCTCGTGGGTGGCACTAGCCAAGCACCAAGTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS TCA 90 bp | GCTTGCAGTGCTCCCGGAGCTGTTTCTCGCGCGGCAACAGGAAGGTaGGAACCTTGTTGCGCACGATGCCACGGTCCTCCTCCTCCCTTA | + |
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Preference number: 5 (lower is better) Translates to: ACSAPGAVSRAATGR*EPCCARCHGPPPPL Trigger: TAAGGGAGGAGGAGGACCGTGGCATCGTGCGCAACAAGGTTCTCACCTTCCTGTTGCCGCGCGAGAAACAGCTCCGGGAGCACTGCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS GCA 90 bp | TCTTTCTTAAAGTCCTCCAGTTCCCGTTGCACCCCGGCCACCTTCTaGTGCAGGATCTCCAAGTCAGCGGGTGGTGGGAGGCAGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SFLKSSSSRCTPATF*CRISKSAGGGRQEG Trigger: GCCCTCCTGCCTCCCACCACCCGCTGACTTGGAGATCCTGCAGCAGAAGGTGGCCGGGGTGCAACGGGAACTGGAGGACTTTAAGAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CAA 90 bp | AGTTCAAGTGAAAGTTACAGGGGCCTGACTCAGTACTGGGGTGCCTCCTTCCTTAGGTCCTCCAGCCGCTaGCAGTGCTCCCGGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SSSESYRGLTQYWGASFLRSSSR*QCSRSC Trigger: ACAGCTCCGGGAGCACTGCAAGCGGCTGGAGGACCT...AAGGAAGGAGGCACCCCAGTACTGAGTCAGGCCCCTGTAACTTTCACTTGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CAA 90 bp | CAGGGGCCTGACTCAGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATAGGAAGGTGAGAACCTaGTTGCGCACGATGCCACGG | + |
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Preference number: 5 (lower is better) Translates to: QGPDSVLGCLLPLECWINRKVRT*LRTMPR Trigger: CCGTGGCATCGTGCGCAACAAGGTTCTCACCTTCCT...ATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACTGAGTCAGGCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CAA 90 bp | TCAGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATGGAATTTCACCATCAGCCTGGCTCTTCTaGGTGGCACGCAGGGCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SVLGCLLPLECWINGISPSAWLF*VARRAS Trigger: TGACGCCCTGCGTGCCACCAAGAAGAGCCAGGCTGA...TGGTGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS GCA 90 bp | ATTCATCTCGCAGAAGGCGTCTTCAAGGTAATGAATGGACTTCAATaGCTCTTTCTTAAAGTCCTCCAGTTCCCGTTGCACCCCGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: IHLAEGVFKVMNGLQ*LFLKVLQFPLHPGH Trigger: GTGGCCGGGGTGCAACGGGAACTGGAGGACTTTAAGAAAGAGGCATTGAAGTCCATTCATTACCTTGAAGACGCCTTCTGCGAGATGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CAA 90 bp | TCAGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATGGAATTTCACCAAAGGTGAGAACCTTGTaGCGCACGATGCCACGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SVLGCLLPLECWINGISPKVRTL*RTMPRS Trigger: GGACCGTGGCATCGTGCGCAACAAGGTTCTCACCTT...TGGTGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CAA 90 bp | AAGAGGTATACATTGAGCAATAGTACCATTACAAACAGGAAAACAGTTCAAGTGTCTTCAACTTGGTGCTaGGCTAGTGCCACCCACGAG | + |
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Preference number: 5 (lower is better) Translates to: KRYTLSNSTITNRKTVQVSSTWC*ASATHE Trigger: CTCGTGGGTGGCACTAGCCAAGCACCAAGTTGAAGA...CACTTGAACTGTTTTCCTGTTTGTAATGGTACTATTGCTCAATGTATACCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CAA 90 bp | AAGAGGTATACATTGAGCAATAGTACCATTACAAACAGGAAAACAGTTCAAGTGCAAGGGGGTAGGGACTaGGGGTTTCTCCTTCCGTTA | + |
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Preference number: 5 (lower is better) Translates to: KRYTLSNSTITNRKTVQVQGGRD*GFLLPL Trigger: TAACGGAAGGAGAAACCCCAAGTCCCTACCCCCTTG...CACTTGAACTGTTTTCCTGTTTGTAATGGTACTATTGCTCAATGTATACCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS-3UTR CAA 90 bp | TCAGTACTGGGGTGCCTCCTTCCTTTAGAATGCTGGATAAATGGAATTTCACCAAATATTGAAGTCTTTTaGCCTCTCAGCAAGGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: SVLGCLLPLECWINGISPNIEVF*PLSKVL Trigger: TAACACCTTGCTGAGAGGCAAAAAGACTTCAATATT...TGGTGAAATTCCATTTATCCAGCATTCTAAAGGAAGGAGGCACCCCAGTACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CAA 90 bp | CGCAGGGCGTCACGTCCCCTGTCCAGCAGCAGGTCCTCCAGCCGCTaGCAGTGCTCCCGGAGCTGTTTCTCGCGCGGCAACAGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RRASRPLSSSRSSSR*QCSRSCFSRGNRKV Trigger: CACCTTCCTGTTGCCGCGCGAGAAACAGCTCCGGGAGCACTGCAAGCGGCTGGAGGACCTGCTGCTGGACAGGGGACGTGACGCCCTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS GCA 72 bp | CACGTCCCCTGTCCAGCAGCAGGTCCTCCAGCCGCTTaGAGTGCTCCCGGAGCTGTTTCTCGCGCGGCAACA | + |
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Preference number: 6 (lower is better) Translates to: HVPCPAAGPPAA*SAPGAVSRAAT Trigger: TGTTGCCGCGCGAGAAACAGCTCCGGGAGCACTGCAAGCGGCTGGAGGACCTGCTGCTGGACAGGGGACGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS GCA 72 bp | TCCTCCAGTTCCCGTTGCACCCCGGCCACCTTCTGCTaGAGGATCTCCAAGTCAGCGGGTGGTGGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSSSRCTPATFC*RISKSAGGGRQ Trigger: CTGCCTCCCACCACCCGCTGACTTGGAGATCCTGCAGCAGAAGGTGGCCGGGGTGCAACGGGAACTGGAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS GCA 72 bp | TCCTCCTCCCTTAGCCGCTGCCTCACGCGAGCCGCCTaGTCCTCCTGTTGCACCAGGGCTCCATTCATCTCG | + |
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Preference number: 6 (lower is better) Translates to: SSSLSRCLTRAA*SSCCTRAPFIS Trigger: CGAGATGAATGGAGCCCTGGTGCAACAGGAGGAGCAGGCGGCTCGCGTGAGGCAGCGGCTAAGGGAGGAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CCA 72 bp | CCACCCACGAGGTTCAGTCAGCCTGGCTCTTCTTGGTaGCACGCAGGGCGTCACGTCCCCTGTCCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PPTRFSQPGSSW*HAGRHVPCPAA Trigger: TGCTGCTGGACAGGGGACGTGACGCCCTGCGTGCCACCAAGAAGAGCCAGGCTGACTGAACCTCGTGGGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CCA 72 bp | GTGCCACCCACGAGGTTCAGTCAGCCTGGCTCTTCTTaGTGGCACGCAGGGCGTCACGTCCCCTGTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VPPTRFSQPGSS*WHAGRHVPCPA Trigger: TGCTGGACAGGGGACGTGACGCCCTGCGTGCCACCAAGAAGAGCCAGGCTGACTGAACCTCGTGGGTGGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CAA 72 bp | AGTGCCACCCACGAGGTTCAGTCAGCCTGGCTCTTCTaGGTGGCACGCAGGGCGTCACGTCCCCTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SATHEVQSAWLF*VARRASRPLSS Trigger: GCTGGACAGGGGACGTGACGCCCTGCGTGCCACCAAGAAGAGCCAGGCTGACTGAACCTCGTGGGTGGCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CAA 90 bp | TGCTTGGCTAGTGCCACCCACGAGGTTCAGTCAGCCTGGCTCTTCTaGGTGGCACGCAGGGCGTCACGTCCCCTGTCCAGCAGCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CLASATHEVQSAWLF*VARRASRPLSSSRS Trigger: GGACCTGCTGCTGGACAGGGGACGTGACGCCCTGCGTGCCACCAAGAAGAGCCAGGCTGACTGAACCTCGTGGGTGGCACTAGCCAAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS GCA 72 bp | AAGTCCTCCAGTTCCCGTTGCACCCCGGCCACCTTCTaGTGCAGGATCTCCAAGTCAGCGGGTGGTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: KSSSSRCTPATF*CRISKSAGGGR Trigger: CCTCCCACCACCCGCTGACTTGGAGATCCTGCAGCAGAAGGTGGCCGGGGTGCAACGGGAACTGGAGGACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CCA 72 bp | TGCTTGGCTAGTGCCACCCACGAGGTTCAGTCAGCCTaGCTCTTCTTGGTGGCACGCAGGGCGTCACGTCCC | + |
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Preference number: 6 (lower is better) Translates to: CLASATHEVQSA*LFLVARRASRP Trigger: GGGACGTGACGCCCTGCGTGCCACCAAGAAGAGCCAGGCTGACTGAACCTCGTGGGTGGCACTAGCCAAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CAA 90 bp | TCCCGGAGCTGTTTCTCGCGCGGCAACAGGAAGGTGAGAACCTTGTaGCGCACGATGCCACGGTCCTCCTCCTCCCTTAGCCGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SRSCFSRGNRKVRTL*RTMPRSSSSLSRCL Trigger: GAGGCAGCGGCTAAGGGAGGAGGAGGACCGTGGCATCGTGCGCAACAAGGTTCTCACCTTCCTGTTGCCGCGCGAGAAACAGCTCCGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CAA 90 bp | TGCTCCCGGAGCTGTTTCTCGCGCGGCAACAGGAAGGTGAGAACCTaGTTGCGCACGATGCCACGGTCCTCCTCCTCCCTTAGCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CSRSCFSRGNRKVRT*LRTMPRSSSSLSRC Trigger: GCAGCGGCTAAGGGAGGAGGAGGACCGTGGCATCGTGCGCAACAAGGTTCTCACCTTCCTGTTGCCGCGCGAGAAACAGCTCCGGGAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS TCA 72 bp | GCTCCCGGAGCTGTTTCTCGCGCGGCAACAGGAAGGTaGGAACCTTGTTGCGCACGATGCCACGGTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: APGAVSRAATGR*EPCCARCHGPP Trigger: AGGAGGACCGTGGCATCGTGCGCAACAAGGTTCTCACCTTCCTGTTGCCGCGCGAGAAACAGCTCCGGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CAA 72 bp | TGTTTCTCGCGCGGCAACAGGAAGGTGAGAACCTTGTaGCGCACGATGCCACGGTCCTCCTCCTCCCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: CFSRGNRKVRTL*RTMPRSSSSLS Trigger: GCTAAGGGAGGAGGAGGACCGTGGCATCGTGCGCAACAAGGTTCTCACCTTCCTGTTGCCGCGCGAGAAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS CAA 72 bp | AGCTGTTTCTCGCGCGGCAACAGGAAGGTGAGAACCTaGTTGCGCACGATGCCACGGTCCTCCTCCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: SCFSRGNRKVRT*LRTMPRSSSSL Trigger: AAGGGAGGAGGAGGACCGTGGCATCGTGCGCAACAAGGTTCTCACCTTCCTGTTGCCGCGCGAGAAACAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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| CDS GCA 72 bp | TTCAATGCCTCTTTCTTAAAGTCCTCCAGTTCCCGTTaGACCCCGGCCACCTTCTGCTGCAGGATCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: FNASFLKSSSSR*TPATFCCRISK Trigger: CTTGGAGATCCTGCAGCAGAAGGTGGCCGGGGTGCAACGGGAACTGGAGGACTTTAAGAAAGAGGCATTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299415.3 |
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