Pregenerated sensors for CCDC18 (Homo sapiens)
Ensembl gene IDs: ENSG00000122483Ensembl transcript IDs: ENST00000343253.11, ENST00000370276.5, ENST00000401026.7, ENST00000421014.2, ENST00000447456.1, ENST00000448243.5, ENST00000455267.1, ENST00000479653.5, ENST00000481180.5, ENST00000528942.1
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TGTTCTTCTAAGATTGGGACACTGGCTGCCTGCTGTTaGGCAGACTCAAGCATAGAAACTTTTGCTCTTGAC | + |
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Preference number: 3 (lower is better) Translates to: CSSKIGTLAACC*ADSSIETFALD Trigger: GTCAAGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCAATCTTAGAAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| 3UTR-3UTR CAA 90 bp | TGCTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTTGAATCAGCTGAAACTGACTCTGAGATAACTGATTaGCAGTCAGGTTTGCATGAA | + |
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Preference number: 3 (lower is better) Translates to: CWSLKLSLAAPLESAETDSEITD*QSGLHE Trigger: TTCATGCAAACCTGACTGCAAATCAGTTATCTCAGA...GTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| 3UTR-3UTR CAA 90 bp | TGCTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTTGAATCAGCTGAAACTGACGATTTGCAGTCAGGTTaGCATGAAGCTTTTGAATTT | + |
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Preference number: 3 (lower is better) Translates to: CWSLKLSLAAPLESAETDDLQSG*HEAFEF Trigger: AAATTCAAAAGCTTCATGCAAACCTGACTGCAAATC...GTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| 3UTR GCA 72 bp | GTTGAGAACATTTCTTTGTCATTTCACTTTCCAGTTTaGTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: VENISLSFHFPV*WSLKLSLAAPL Trigger: AAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCAAACTGGAAAGTGAAATGACAAAGAAATGTTCTCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR GCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTCCTTTCCCGGGCCCCTaGGCGTGGAAGCCTCGGACA | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSPFPGP*AWKPRT Trigger: TGTCCGAGGCTTCCACGCGCAGGGGCCCGGGAAAGG...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR CCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTCCGGGCCCCTGCGCGTaGAAGCCTCGGACACAACTC | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSPGPCA*KPRTQL Trigger: GAGTTGTGTCCGAGGCTTCCACGCGCAGGGGCCCGG...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR TCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTGCGTTAGGAAGCCTCTaGCCCTTTCCCGGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSALGSL*PFPGPL Trigger: CAGGGGCCCGGGAAAGGGTCAGAGGCTTCCTAACGC...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR GCA 90 bp | TGCTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTTGAATCAGCTGAAACTGACGACCCACCCGGCGACTaGGCGCTTCGCACTCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: CWSLKLSLAAPLESAETDDPPGD*ALRTRV Trigger: GACTCGAGTGCGAAGCGCGCAGTCGCCGGGTGGGTC...GTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTTGAATCAGCTGAAACTGACGCGTTAGGAAGCCTCTaGCCCTTTCCCGGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: CWSLKLSLAAPLESAETDALGSL*PFPGPL Trigger: CAGGGGCCCGGGAAAGGGTCAGAGGCTTCCTAACGC...GTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR GCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTTCCATTTCCGGCGACTaGGCGCTTCGCACTCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSSISGD*ALRTRV Trigger: GACTCGAGTGCGAAGCGCGCAGTCGCCGGAAATGGA...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR GCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTGATTGGGACACTGGCTaGCTGCTGTTGAGCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSDWDTG*LLLSRL Trigger: GAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCAATC...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR GCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTCTTCGCACTCGAGTCTaGGTTAGGAAGCCTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSLRTRV*VRKPLT Trigger: GGTCAGAGGCTTCCTAACGCAGACTCGAGTGCGAAG...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR TCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTCTGGCTGCCTGCTGTTaGGCAGACTCAAGCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSLAACC*ADSSIE Trigger: TTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAG...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR CCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTCTAAGATTGGGACACTaGCTGCCTGCTGTTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSLRLGH*LPAVEQ Trigger: CTGCTCAACAGCAGGCAGCCAGTGTCCCAATCTTAG...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTTGAATCAGCTGAAACTGACCTGGCTGCCTGCTGTTaGGCAGACTCAAGCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: CWSLKLSLAAPLESAETDLAACC*ADSSIE Trigger: TTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAG...GTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR TCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTCACAGGGGCAGAAGATaGAAACATCTGGATAACTCT | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSHRGRR*KHLDNS Trigger: AGAGTTATCCAGATGTTTTCATCTTCTGCCCCTGTG...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCTATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCACCCAAATCGTCGCTaGGGAGAGACCCACCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SASICISLVRSSSIPVTSHPNRR*GETHPA Trigger: CGCCGGGTGGGTCTCTCCCCAGCGACGATTTGGGTG...ACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTTGAATCAGCTGAAACTGACCCAGGGTGGCTAGGCTaGACATCCAAAATTAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: CWSLKLSLAAPLESAETDPGWLG*TSKISF Trigger: AAAGCTAATTTTGGATGTTCAGCCTAGCCACCCTGG...GTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR TCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTCTCAAAACTTTATCTTaGGCTGAAACCTCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSLKTLS*AETSAS Trigger: GGAAGCAGAGGTTTCAGCTCAAGATAAAGTTTTGAG...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR GCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTTCTTCCCCTAAACTCTaGAAACTCCATTCTGTTATC | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSSSPKL*KLHSVI Trigger: GATAACAGAATGGAGTTTGCAGAGTTTAGGGGAAGA...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR TCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTAACTTTATCTTGAGCTaGAACCTCTGCTTCCAAATT | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSNFILS*NLCFQI Trigger: AATTTGGAAGCAGAGGTTTCAGCTCAAGATAAAGTT...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTTGAATCAGCTGAAACTGACCTCAAAACTTTATCTTaGGCTGAAACCTCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CWSLKLSLAAPLESAETDLKTLS*AETSAS Trigger: GGAAGCAGAGGTTTCAGCTCAAGATAAAGTTTTGAG...GTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR GCA 90 bp | ATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCTTTGCCTCGATTGGGACACTGGCTaGCTGCTGTTGAGCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: ICISLVRSSSIPVTSLCLDWDTG*LLLSRL Trigger: GAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCAATC...GAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR GCA 90 bp | ATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCTTTGCCTCCTTCGCACTCGAGTCTaGGTTAGGAAGCCTCTGACC | + |
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Preference number: 4 (lower is better) Translates to: ICISLVRSSSIPVTSLCLLRTRV*VRKPLT Trigger: GGTCAGAGGCTTCCTAACGCAGACTCGAGTGCGAAG...GAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTTGAATCAGCTGAAACTGACTTGTGCCATGACTTCTaGATTTTTCACTGCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: CWSLKLSLAAPLESAETDLCHDF*IFHCHD Trigger: ATCATGGCAGTGAAAAATTCAGAAGTCATGGCACAA...GTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR TCA 90 bp | TGCTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTTGAATCAGCTGAAACTGACCAGTTAGTTGTGCCATaGCTTCTGAATTTTTCACTG | + |
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Preference number: 4 (lower is better) Translates to: CWSLKLSLAAPLESAETDQLVVP*LLNFSL Trigger: CAGTGAAAAATTCAGAAGTCATGGCACAACTAACTG...GTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR GCA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTTTCCAGCTTATTTTCTaGCTCTCTCAAAACTTTATC | + |
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Preference number: 4 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSFQLIF*LSQNFI Trigger: GATAAAGTTTTGAGAGAGGCAGAAAATAAGCTGGAA...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCTATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCTAAGATTGGGACACTaGCTGCCTGCTGTTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SASICISLVRSSSIPVTSLRLGH*LPAVEQ Trigger: CTGCTCAACAGCAGGCAGCCAGTGTCCCAATCTTAG...ACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR TCA 90 bp | TCAGCTTCTATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCACAGGGGCAGAAGATaGAAACATCTTATCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SASICISLVRSSSIPVTSHRGRR*KHLISW Trigger: CCAAGAGATAAGATGTTTTCATCTTCTGCCCCTGTG...ACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR TCA 90 bp | ATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCTTTGCCTCGACGTTTTCATAAGGTaGATAATTCAAAAGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ICISLVRSSSIPVTSLCLDVFIR*IIQKSR Trigger: CCTGGACTTTTGAATTATTCACCTTATGAAAACGTC...GAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR TCA 90 bp | ATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCTTTGCCTCAACTTTATCTTGAGCTaGAACCTCTGCTTCCAAATT | + |
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Preference number: 4 (lower is better) Translates to: ICISLVRSSSIPVTSLCLNFILS*NLCFQI Trigger: AATTTGGAAGCAGAGGTTTCAGCTCAAGATAAAGTT...GAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR GCA 90 bp | TCAGCTTCTATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTTCTTCCCCTAAACTCTaGAAACTCCATTCTGTTATC | + |
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Preference number: 4 (lower is better) Translates to: SASICISLVRSSSIPVTSSSPKL*KLHSVI Trigger: GATAACAGAATGGAGTTTGCAGAGTTTAGGGGAAGA...ACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR CCA 90 bp | ATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCTTTGCCTCTTATACATTCCTCTTTaGACTCCTGCAAACTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ICISLVRSSSIPVTSLCLLYIPL*TPANSV Trigger: AACAGAGTTTGCAGGAGTCCAAAGAGGAATGTATAA...GAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCTATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCACTTTCCAGTTTGCTaGAGTTTGAAGCTTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: SASICISLVRSSSIPVTSHFPVC*SLKLSL Trigger: TAGAGAAAGCTTCAAACTCCAGCAAACTGGAAAGTG...ACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR GCA 90 bp | TCAGCTTCTATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTTTTCACTTTCCAGTTTaGTGGAGTTTGAAGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SASICISLVRSSSIPVTSFHFPV*WSLKLS Trigger: AGAAAGCTTCAAACTCCAGCAAACTGGAAAGTGAAA...ACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS GCA 90 bp | GGCTGCCCTTCCCCGTGCTCCTTCTGGCCGCTCTGCCTCCGGTGCTaGTGCCTGGGGCGGCCGGCTTCACACCTTCCCTCGATAGCGACT | + |
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Preference number: 5 (lower is better) Translates to: GCPSPCSFWPLCLRC*CLGRPASHLPSIAT Trigger: AGTCGCTATCGAGGGAAGGTGTGAAGCCGGCCGCCCCAGGCAGCAGCACCGGAGGCAGAGCGGCCAGAAGGAGCACGGGGAAGGGCAGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS GCA 90 bp | TCTGGCTGCCCTTCCCCGTGCTCCTTCTGGCCGCTCTGCCTCCGGTaGTGCTGCCTGGGGCGGCCGGCTTCACACCTTCCCTCGATAGCG | + |
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Preference number: 5 (lower is better) Translates to: SGCPSPCSFWPLCLR*CCLGRPASHLPSIA Trigger: CGCTATCGAGGGAAGGTGTGAAGCCGGCCGCCCCAGGCAGCAGCACCGGAGGCAGAGCGGCCAGAAGGAGCACGGGGAAGGGCAGCCAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS GCA 90 bp | GCGACAAGATCTGGCTGCCCTTCCCCGTGCTCCTTCTGGCCGCTCTaGCTCCGGTGCTGCTGCCTGGGGCGGCCGGCTTCACACCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: ATRSGCPSPCSFWPL*LRCCCLGRPASHLP Trigger: GGGAAGGTGTGAAGCCGGCCGCCCCAGGCAGCAGCACCGGAGGCAGAGCGGCCAGAAGGAGCACGGGGAAGGGCAGCCAGATCTTGTCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS CCA 90 bp | CAGGGATGGGCGACAAGATCTGGCTGCCCTTCCCCGTGCTCCTTCTaGCCGCTCTGCCTCCGGTGCTGCTGCCTGGGGCGGCCGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: QGWATRSGCPSPCSF*PLCLRCCCLGRPAS Trigger: TGAAGCCGGCCGCCCCAGGCAGCAGCACCGGAGGCAGAGCGGCCAGAAGGAGCACGGGGAAGGGCAGCCAGATCTTGTCGCCCATCCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS GCA 90 bp | CTGGGGAGAGACCCACCCGGCGACTGCGCGCTTCGCACTCGAGTCTaGGTTAGGAAGCCTCTGACCCTTTCCCGGGCCCCTGCGCGTGGA | + |
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Preference number: 5 (lower is better) Translates to: LGRDPPGDCALRTRV*VRKPLTLSRAPARG Trigger: TCCACGCGCAGGGGCCCGGGAAAGGGTCAGAGGCTTCCTAACGCAGACTCGAGTGCGAAGCGCGCAGTCGCCGGGTGGGTCTCTCCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370276.5 ENST00000401026.7 ENST00000481180.5 |
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| CDS CCA 90 bp | CTCTTTCAGCCCGGGATCGCCCCAGCAGGGATGGGCGACAAGATCTaGCTGCCCTTCCCCGTGCTCCTTCTGGCCGCTCTGCCTCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: LFQPGIAPAGMGDKI*LPFPVLLLAALPPV Trigger: CACCGGAGGCAGAGCGGCCAGAAGGAGCACGGGGAAGGGCAGCCAGATCTTGTCGCCCATCCCTGCTGGGGCGATCCCGGGCTGAAAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS TCA 90 bp | CCGGCGACTGCGCGCTTCGCACTCGAGTCTGCGTTAGGAAGCCTCTaGCCCTTTCCCGGGCCCCTGCGCGTGGAAGCCTCGGACACAACT | + |
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Preference number: 5 (lower is better) Translates to: PATARFALESALGSL*PFPGPLRVEASDTT Trigger: AGTTGTGTCCGAGGCTTCCACGCGCAGGGGCCCGGGAAAGGGTCAGAGGCTTCCTAACGCAGACTCGAGTGCGAAGCGCGCAGTCGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000370276.5 ENST00000401026.7 ENST00000448243.5 ENST00000479653.5 |
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| CDS TCA 90 bp | CACGAGGAGTCCAGAGAGGAAACGCGGAGCGGAGACAACAGTACCTaGCGCCTCTTTCAGCCCGGGATCGCCCCAGCAGGGATGGGCGAC | + |
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Preference number: 5 (lower is better) Translates to: HEESREETRSGDNST*RLFQPGIAPAGMGD Trigger: GTCGCCCATCCCTGCTGGGGCGATCCCGGGCTGAAAGAGGCGTCAGGTACTGTTGTCTCCGCTCCGCGTTTCCTCTCTGGACTCCTCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343253.11 |
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| CDS CCA 90 bp | GCCCGGGACTACATTTCCCACAATTACCGCCATGATGCCCATTGGTaGGGGAAGCCATGGGAACCGGAGGCCGTCAGGGGGAGAGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: ARDYISHNYRHDAHW*GKPWEPEAVRGRGG Trigger: CCCGCCTCTCCCCCTGACGGCCTCCGGTTCCCATGGCTTCCCCCACCAATGGGCATCATGGCGGTAATTGTGGGAAATGTAGTCCCGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS CCA 90 bp | CCCGCCCGGGACTACATTTCCCACAATTACCGCCATGATGCCCATTaGTGGGGGAAGCCATGGGAACCGGAGGCCGTCAGGGGGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PARDYISHNYRHDAH*WGKPWEPEAVRGRG Trigger: GCCTCTCCCCCTGACGGCCTCCGGTTCCCATGGCTTCCCCCACCAATGGGCATCATGGCGGTAATTGTGGGAAATGTAGTCCCGGGCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS CCA 90 bp | GGTTGCGGAATAGGACTGCTAGCCCCGCCCAGAGTCCCTACCCTTTaGAGAACTGCGCTTCTCTTTCGGAGGGAGTGTTCGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GCGIGLLAPPRVPTL*RTALLFRRECSPPP Trigger: CGGCGGCGGCGAACACTCCCTCCGAAAGAGAAGCGCAGTTCTCCAAAGGGTAGGGACTCTGGGCGGGGCTAGCAGTCCTATTCCGCAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS TCA 90 bp | ACTAGCGGAGCCCGCCCGGGACTACATTTCCCACAATTACCGCCATaGTGCCCATTGGTGGGGGAAGCCATGGGAACCGGAGGCCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSGARPGLHFPQLPP*CPLVGEAMGTGGRQ Trigger: CTGACGGCCTCCGGTTCCCATGGCTTCCCCCACCAATGGGCATCATGGCGGTAATTGTGGGAAATGTAGTCCCGGGCGGGCTCCGCTAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS GCA 90 bp | GAACTAGATTCCATTTCCGGCGACTGCGCGCTTCGCACTCGAGTCTaGGTTAGGAAGCCTCTGACCCTTTCCCGGGCCCCTGCGCGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ELDSISGDCALRTRV*VRKPLTLSRAPARG Trigger: TCCACGCGCAGGGGCCCGGGAAAGGGTCAGAGGCTTCCTAACGCAGACTCGAGTGCGAAGCGCGCAGTCGCCGGAAATGGAATCTAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448243.5 ENST00000479653.5 |
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| CDS GCA 90 bp | CTCGATAGCGACTTCACCTTTACCCTTCCCGCCGGCCAGAAGGAGTaGTTCTACCAGCCCATGCCCCTGAAGGCCTCGCTGGAGATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LDSDFTFTLPAGQKE*FYQPMPLKASLEIE Trigger: CTCGATCTCCAGCGAGGCCTTCAGGGGCATGGGCTGGTAGAAGCACTCCTTCTGGCCGGCGGGAAGGGTAAAGGTGAAGTCGCTATCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS GCA 90 bp | TCCATTTCACCCAAATCGTCGCTGGGGAGAGACCCACCCGGCGACTaGGCGCTTCGCACTCGAGTCTGCGTTAGGAAGCCTCTGACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SISPKSSLGRDPPGD*ALRTRVCVRKPLTL Trigger: AAGGGTCAGAGGCTTCCTAACGCAGACTCGAGTGCGAAGCGCGCAGTCGCCGGGTGGGTCTCTCCCCAGCGACGATTTGGGTGAAATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370276.5 ENST00000401026.7 ENST00000481180.5 |
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| CDS CCA 90 bp | CAGCTGCACTGCGTTGTCGCCTCTCACCCGTTTAGAAACTTCTGGTaGACGGCCCTGGTGGTGAAGAGGCGAGGGCCGTTCAGGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLHCVVASHPFRNFW*TALVVKRRGPFRKP Trigger: TGGCTTCCTGAACGGCCCTCGCCTCTTCACCACCAGGGCCGTCCACCAGAAGTTTCTAAACGGGTGAGAGGCGACAACGCAGTGCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343253.11 |
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| CDS CCA 90 bp | ACCCAGCTGCACTGCGTTGTCGCCTCTCACCCGTTTAGAAACTTCTaGTGGACGGCCCTGGTGGTGAAGAGGCGAGGGCCGTTCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TQLHCVVASHPFRNF*WTALVVKRRGPFRK Trigger: CTTCCTGAACGGCCCTCGCCTCTTCACCACCAGGGCCGTCCACCAGAAGTTTCTAAACGGGTGAGAGGCGACAACGCAGTGCAGCTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343253.11 |
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| CDS CCA 90 bp | GCTTCTCTTTCGGAGGGAGTGTTCGCCGCCGCCGCGGCCGCCACCTaGAGTTTCTTCAGACTCCAGATTTCCCTGTCAACCACGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASLSEGVFAAAAAAT*SFFRLQISLSTTRS Trigger: ACTCCTCGTGGTTGACAGGGAAATCTGGAGTCTGAAGAAACTCCAGGTGGCGGCCGCGGCGGCGGCGAACACTCCCTCCGAAAGAGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343253.11 |
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| CDS GCA 90 bp | CCTTTCTATTTCTCTCTGTGCTTGGACTTGCTGATGACGAGCCTCTaGCAATTCTGTATGAGAGTTCTGCACCTGCTCCCGGGTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PFYFSLCLDLLMTSL*QFCMRVLHLLPGQP Trigger: AGGCTGACCCGGGAGCAGGTGCAGAACTCTCATACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS-3UTR CAA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTACTGGCTGCCTGCTGTaGAGCAGACTCAAGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSTGCLL*SRLKHR Trigger: TCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGT...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR CAA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTTCTGTTCTTCTAAGATaGGGACACTGGCTGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSSVLLR*GHWLPA Trigger: AGCAGGCAGCCAGTGTCCCAATCTTAGAAGAACAGA...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS TCA 90 bp | CGGGTCAGCCTCAATTCTTGCCCCAAATCTATGGCCTCCTTGTACTaGGTGGCAATGTACTGTTCTTGCTCTTTCATAACACTCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RVSLNSCPKSMASLY*VAMYCSCSFITLSI Trigger: AATGGAGAGTGTTATGAAAGAGCAAGAACAGTACATTGCCACTCAGTACAAGGAGGCCATAGATTTGGGGCAAGAATTGAGGCTGACCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS GCA 90 bp | CTTCATATCCTCCAGTTCACTAGAGAGCCTTTCTATTTCTCTCTGTaGTTGGACTTGCTGATGACGAGCCTCTGCCAATTCTGTATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHILQFTREPFYFSL*LDLLMTSLCQFCMR Trigger: TCTCATACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGGCTCTCTAGTGAACTGGAGGATATGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS-3UTR CAA 90 bp | TGGGACACTGGCTGCCTGCTGTTGAGCAGACTCAAGCATAGAAACTTTTGCTCTTTAAGGAAGCAACATTaGCAAGCAAACTTTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WDTGCLLLSRLKHRNFCSLRKQH*QANFPL Trigger: AAGAGGAAAGTTTGCTTGCAAATGTTGCTTCCTTAA...AGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGTGTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479653.5 |
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| CDS-3UTR CAA 90 bp | ATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCTTTGCCTCACTGGCTGCCTGCTGTaGAGCAGACTCAAGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: ICISLVRSSSIPVTSLCLTGCLL*SRLKHR Trigger: TCTATGCTTGAGTCTGCTCAACAGCAGGCAGCCAGT...GAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR CAA 90 bp | TGCTGGAGTTTGAAGCTTTCTCTAGCAGCTCCTCTTGAATCAGCTGAAACTGACTCCAGTAACAAGTCTTaGCCTCTCTTTTTCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: CWSLKLSLAAPLESAETDSSNKS*PLFFIL Trigger: CAATATGAAAAAGAGAGGCAAAGACTTGTTACTGGA...GTCAGTTTCAGCTGATTCAAGAGGAGCTGCTAGAGAAAGCTTCAAACTCCAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR CAA 90 bp | ATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCTTTGCCTCTTTATACATTCCTCTTaGGACTCCTGCAAACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ICISLVRSSSIPVTSLCLFIHSS*DSCKLC Trigger: ACAGAGTTTGCAGGAGTCCAAAGAGGAATGTATAAA...GAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR CAA 90 bp | ATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCTTTGCCTCATTTCACTTTCCAGTTaGCTGGAGTTTGAAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ICISLVRSSSIPVTSLCLISLSS*LEFEAF Trigger: GAAAGCTTCAAACTCCAGCAAACTGGAAAGTGAAAT...GAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS TCA 90 bp | ATTTCCCCTTTGCTTTCCGTCAAGAGTCTATCTAGTGATTCAAGATaGTGTTGTTTGCATATTATATCTTGTTGCAACATGGACATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISPLLSVKSLSSDSR*CCLHIISCCNMDIV Trigger: GACTATGTCCATGTTGCAACAAGATATAATATGCAAACAACATCATCTTGAATCACTAGATAGACTCTTGACGGAAAGCAAAGGGGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000455267.1 |
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| CDS GCA 90 bp | CAGCTTCAATTACTTCATTCCTATCTTGGACTTGTTGATGCAAATTaGTTACAGTATCCTGAGCTTCTTCTAATTCCAATTTTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLQLLHSYLGLVDAN*LQYPELLLIPILPS Trigger: AGAAGGCAAAATTGGAATTAGAAGAAGCTCAGGATACTGTAAGCAATTTGCATCAACAAGTCCAAGATAGGAATGAAGTAATTGAAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS-3UTR CAA 90 bp | ATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTCTTTGCCTCGATTTGCAGTCAGGTTaGCATGAAGCTTTTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: ICISLVRSSSIPVTSLCLDLQSG*HEAFEF Trigger: AAATTCAAAAGCTTCATGCAAACCTGACTGCAAATC...GAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS-3UTR CAA 90 bp | TCAGCTTCTATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTTCTGAGATAACTGATTaGCAGTCAGGTTTGCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: SASICISLVRSSSIPVTSSEITD*QSGLHE Trigger: TTCATGCAAACCTGACTGCAAATCAGTTATCTCAGA...ACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS TCA 90 bp | GCTGTGAGATCCTTTATAGTAGTGTATTTTTCCTCTAATGATAATTaGGCCTTCTGTAGTACATCTCTCAATTCCTGGAGTTGTCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: AVRSFIVVYFSSNDN*AFCSTSLNSWSCLK Trigger: TTTAAGACAACTCCAGGAATTGAGAGATGTACTACAGAAGGCTCAATTATCATTAGAGGAAAAATACACTACTATAAAGGATCTCACAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000455267.1 |
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| CDS-3UTR CAA 90 bp | TCAGCTTCTATTTGTATCAGCTTAGTACGTAGTTCTTCTATTCCAGTAACAAGTTTAAGGAAGCAACATTaGCAAGCAAACTTTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SASICISLVRSSSIPVTSLRKQH*QANFPL Trigger: AAGAGGAAAGTTTGCTTGCAAATGTTGCTTCCTTAA...ACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGCTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481180.5 |
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| CDS CCA 72 bp | CCGGCAGCACAGAATTCGAACCGCCGCGGGAGCCGTTaGGACGCGCCTACCCGGTCACTGCCCCGCCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PAAQNSNRRGSR*DAPTRSLPRPG Trigger: GCCGGGGCGGGGCAGTGACCGGGTAGGCGCGTCCCAACGGCTCCCGCGGCGGTTCGAATTCTGTGCTGCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS CAA 72 bp | CCCGGCAGCACAGAATTCGAACCGCCGCGGGAGCCGTaGGGACGCGCCTACCCGGTCACTGCCCCGCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSTEFEPPREP*GRAYPVTAPPR Trigger: CCGGGGCGGGGCAGTGACCGGGTAGGCGCGTCCCAACGGCTCCCGCGGCGGTTCGAATTCTGTGCTGCCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS GCA 72 bp | CCTTCCCCGTGCTCCTTCTGGCCGCTCTGCCTCCGGTaGTGCTGCCTGGGGCGGCCGGCTTCACACCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSPCSFWPLCLR*CCLGRPASHLP Trigger: GGGAAGGTGTGAAGCCGGCCGCCCCAGGCAGCAGCACCGGAGGCAGAGCGGCCAGAAGGAGCACGGGGAAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS CCA 72 bp | GCGACAAGATCTGGCTGCCCTTCCCCGTGCTCCTTCTaGCCGCTCTGCCTCCGGTGCTGCTGCCTGGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ATRSGCPSPCSF*PLCLRCCCLGR Trigger: CCGCCCCAGGCAGCAGCACCGGAGGCAGAGCGGCCAGAAGGAGCACGGGGAAGGGCAGCCAGATCTTGTCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS CAA 90 bp | CGGGCGGCGCTCACGCCTGGCCTGAGGGGGCCGAGACTGAGGCGGTaGCGGAATAGGACTGCTAGCCCCGCCCAGAGTCCCTACCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RAALTPGLRGPRLRR*RNRTASPAQSPYPL Trigger: CAAAGGGTAGGGACTCTGGGCGGGGCTAGCAGTCCTATTCCGCAACCGCCTCAGTCTCGGCCCCCTCAGGCCAGGCGTGAGCGCCGCCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS CCA 72 bp | CCCGGGATCGCCCCAGCAGGGATGGGCGACAAGATCTaGCTGCCCTTCCCCGTGCTCCTTCTGGCCGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGIAPAGMGDKI*LPFPVLLLAAL Trigger: CAGAGCGGCCAGAAGGAGCACGGGGAAGGGCAGCCAGATCTTGTCGCCCATCCCTGCTGGGGCGATCCCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS TCA 72 bp | GCGCGCTTCGCACTCGAGTCTGCGTTAGGAAGCCTCTaGCCCTTTCCCGGGCCCCTGCGCGTGGAAGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ARFALESALGSL*PFPGPLRVEAS Trigger: CGAGGCTTCCACGCGCAGGGGCCCGGGAAAGGGTCAGAGGCTTCCTAACGCAGACTCGAGTGCGAAGCGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000370276.5 ENST00000401026.7 ENST00000448243.5 ENST00000479653.5 ENST00000481180.5 |
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| CDS GCA 72 bp | GGATCGCCCCAGCAGGGATGGGCGACAAGATCTGGCTaGCCTTCCCCGTGCTCCTTCTGGCCGCTCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSPQQGWATRSG*PSPCSFWPLCL Trigger: GAGGCAGAGCGGCCAGAAGGAGCACGGGGAAGGGCAGCCAGATCTTGTCGCCCATCCCTGCTGGGGCGATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS GCA 72 bp | GACCCACCCGGCGACTGCGCGCTTCGCACTCGAGTCTaGGTTAGGAAGCCTCTGACCCTTTCCCGGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: DPPGDCALRTRV*VRKPLTLSRAP Trigger: AGGGGCCCGGGAAAGGGTCAGAGGCTTCCTAACGCAGACTCGAGTGCGAAGCGCGCAGTCGCCGGGTGGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370276.5 ENST00000401026.7 ENST00000481180.5 |
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| CDS CCA 72 bp | AATTACCGCCATGATGCCCATTGGTGGGGGAAGCCATaGGAACCGGAGGCCGTCAGGGGGAGAGGCGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: NYRHDAHWWGKP*EPEAVRGRGGR Trigger: CCGCCCGCCTCTCCCCCTGACGGCCTCCGGTTCCCATGGCTTCCCCCACCAATGGGCATCATGGCGGTAATT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS GCA 72 bp | CCCAAATCGTCGCTGGGGAGAGACCCACCCGGCGACTaGGCGCTTCGCACTCGAGTCTGCGTTAGGAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PKSSLGRDPPGD*ALRTRVCVRKP Trigger: AGGCTTCCTAACGCAGACTCGAGTGCGAAGCGCGCAGTCGCCGGGTGGGTCTCTCCCCAGCGACGATTTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370276.5 ENST00000401026.7 ENST00000481180.5 |
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| CDS GCA 72 bp | GCTAGCCCCGCCCAGAGTCCCTACCCTTTGGAGAACTaGGCTTCTCTTTCGGAGGGAGTGTTCGCCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASPAQSPYPLEN*ASLSEGVFAAA Trigger: GGCGGCGGCGAACACTCCCTCCGAAAGAGAAGCGCAGTTCTCCAAAGGGTAGGGACTCTGGGCGGGGCTAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS TCA 72 bp | TCCAGAGAGGAAACGCGGAGCGGAGACAACAGTACCTaGCGCCTCTTTCAGCCCGGGATCGCCCCAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SREETRSGDNST*RLFQPGIAPAG Trigger: CCCTGCTGGGGCGATCCCGGGCTGAAAGAGGCGTCAGGTACTGTTGTCTCCGCTCCGCGTTTCCTCTCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343253.11 |
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| CDS GCA 72 bp | TCCATTTCCGGCGACTGCGCGCTTCGCACTCGAGTCTaGGTTAGGAAGCCTCTGACCCTTTCCCGGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SISGDCALRTRV*VRKPLTLSRAP Trigger: AGGGGCCCGGGAAAGGGTCAGAGGCTTCCTAACGCAGACTCGAGTGCGAAGCGCGCAGTCGCCGGAAATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448243.5 ENST00000479653.5 |
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| CDS CCA 72 bp | TCGGAGGGAGTGTTCGCCGCCGCCGCGGCCGCCACCTaGAGTTTCTTCAGACTCCAGATTTCCCTGTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: SEGVFAAAAAAT*SFFRLQISLST Trigger: GGTTGACAGGGAAATCTGGAGTCTGAAGAAACTCCAGGTGGCGGCCGCGGCGGCGGCGAACACTCCCTCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343253.11 |
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| CDS CAA 90 bp | CGGTTGCGGAATAGGACTGCTAGCCCCGCCCAGAGTCCCTACCCTTaGGAGAACTGCGCTTCTCTTTCGGAGGGAGTGTTCGCCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLRNRTASPAQSPYP*ENCASLSEGVFAAA Trigger: GGCGGCGGCGAACACTCCCTCCGAAAGAGAAGCGCAGTTCTCCAAAGGGTAGGGACTCTGGGCGGGGCTAGCAGTCCTATTCCGCAACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS CCA 72 bp | CACTGCGTTGTCGCCTCTCACCCGTTTAGAAACTTCTaGTGGACGGCCCTGGTGGTGAAGAGGCGAGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: HCVVASHPFRNF*WTALVVKRRGP Trigger: CGGCCCTCGCCTCTTCACCACCAGGGCCGTCCACCAGAAGTTTCTAAACGGGTGAGAGGCGACAACGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS CCA 72 bp | TGCGTTGTCGCCTCTCACCCGTTTAGAAACTTCTGGTaGACGGCCCTGGTGGTGAAGAGGCGAGGGCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CVVASHPFRNFW*TALVVKRRGPF Trigger: GAACGGCCCTCGCCTCTTCACCACCAGGGCCGTCCACCAGAAGTTTCTAAACGGGTGAGAGGCGACAACGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000528942.1 |
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| CDS CCA 72 bp | ATAGGACTGCTAGCCCCGCCCAGAGTCCCTACCCTTTaGAGAACTGCGCTTCTCTTTCGGAGGGAGTGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: IGLLAPPRVPTL*RTALLFRRECS Trigger: CGAACACTCCCTCCGAAAGAGAAGCGCAGTTCTCCAAAGGGTAGGGACTCTGGGCGGGGCTAGCAGTCCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS CCA 72 bp | GACTACATTTCCCACAATTACCGCCATGATGCCCATTaGTGGGGGAAGCCATGGGAACCGGAGGCCGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DYISHNYRHDAH*WGKPWEPEAVR Trigger: CCTGACGGCCTCCGGTTCCCATGGCTTCCCCCACCAATGGGCATCATGGCGGTAATTGTGGGAAATGTAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS CAA 72 bp | AATAGGACTGCTAGCCCCGCCCAGAGTCCCTACCCTTaGGAGAACTGCGCTTCTCTTTCGGAGGGAGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: NRTASPAQSPYP*ENCASLSEGVF Trigger: GAACACTCCCTCCGAAAGAGAAGCGCAGTTCTCCAAAGGGTAGGGACTCTGGGCGGGGCTAGCAGTCCTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401026.7 |
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| CDS GCA 72 bp | TTCTCTCTGTGCTTGGACTTGCTGATGACGAGCCTCTaGCAATTCTGTATGAGAGTTCTGCACCTGCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: FSLCLDLLMTSL*QFCMRVLHLLP Trigger: CGGGAGCAGGTGCAGAACTCTCATACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS GCA 72 bp | CTCCAGTTCACTAGAGAGCCTTTCTATTTCTCTCTGTaGTTGGACTTGCTGATGACGAGCCTCTGCCAATTC | + |
|
Preference number: 6 (lower is better) Translates to: LQFTREPFYFSL*LDLLMTSLCQF Trigger: GAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGGCTCTCTAGTGAACTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS CAA 90 bp | CTCCAGTTCACTAGAGAGCCTTTCTATTTCTCTCTGTGCTTGGACTaGCTGATGACGAGCCTCTGCCAATTCTGTATGAGAGTTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LQFTREPFYFSLCLD*LMTSLCQFCMRVLH Trigger: GTGCAGAACTCTCATACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGGCTCTCTAGTGAACTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS CAA 72 bp | CAGTTCACTAGAGAGCCTTTCTATTTCTCTCTGTGCTaGGACTTGCTGATGACGAGCCTCTGCCAATTCTGT | + |
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Preference number: 6 (lower is better) Translates to: QFTREPFYFSLC*DLLMTSLCQFC Trigger: ACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGGCTCTCTAGTGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS CAA 90 bp | CATATCCTCCAGTTCACTAGAGAGCCTTTCTATTTCTCTCTGTGCTaGGACTTGCTGATGACGAGCCTCTGCCAATTCTGTATGAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: HILQFTREPFYFSLC*DLLMTSLCQFCMRV Trigger: AACTCTCATACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAGGCTCTCTAGTGAACTGGAGGATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS GCA 72 bp | CCGAAATCACCAATTTATTTGCCTCACAGCAGCCAATaGAACGGTCTTCCTTGTTTGAGAAGCTACTCATCT | + |
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Preference number: 6 (lower is better) Translates to: PKSPIYLPHSSQ*NGLPCLRSYSS Trigger: AGATGAGTAGCTTCTCAAACAAGGAAGACCGTTGCATTGGCTGCTGTGAGGCAAATAAATTGGTGATTTCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000455267.1 |
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| CDS TCA 72 bp | CTCAATTCTTGCCCCAAATCTATGGCCTCCTTGTACTaGGTGGCAATGTACTGTTCTTGCTCTTTCATAACA | + |
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Preference number: 6 (lower is better) Translates to: LNSCPKSMASLY*VAMYCSCSFIT Trigger: TGTTATGAAAGAGCAAGAACAGTACATTGCCACTCAGTACAAGGAGGCCATAGATTTGGGGCAAGAATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS CAA 72 bp | TATGGCCTCCTTGTACTGAGTGGCAATGTACTGTTCTaGCTCTTTCATAACACTCTCCATTTCTTTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: YGLLVLSGNVLF*LFHNTLHFFHP Trigger: AGGATGAAAGAAATGGAGAGTGTTATGAAAGAGCAAGAACAGTACATTGCCACTCAGTACAAGGAGGCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS GCA 72 bp | AAGCTTAATTCTCAATTCCGAAATCACCAATTTATTTaGCTCACAGCAGCCAATGCAACGGTCTTCCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: KLNSQFRNHQFI*LTAANATVFLV Trigger: AACAAGGAAGACCGTTGCATTGGCTGCTGTGAGGCAAATAAATTGGTGATTTCGGAATTGAGAATTAAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000455267.1 |
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| CDS CAA 90 bp | GTTGCTGAACAGAAGACTTTTGAGAGTCAGCAGAAATCTTCCACTTaGCATGGTTCTCTTGATGTGAAATCATCTCCATATGATAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VAEQKTFESQQKSST*HGSLDVKSSPYDKL Trigger: AAGCTTATCATATGGAGATGATTTCACATCAAGAGAACCATGCAAAGTGGAAGATTTCTGCTGACTCTCAAAAGTCTTCTGTTCAGCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS CAA 72 bp | CAGAAGACTTTTGAGAGTCAGCAGAAATCTTCCACTTaGCATGGTTCTCTTGATGTGAAATCATCTCCATAT | + |
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Preference number: 6 (lower is better) Translates to: QKTFESQQKSST*HGSLDVKSSPY Trigger: ATATGGAGATGATTTCACATCAAGAGAACCATGCAAAGTGGAAGATTTCTGCTGACTCTCAAAAGTCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS CAA 90 bp | ATCACCAATTTATTTGCCTCACAGCAGCCAATGCAACGGTCTTCCTaGTTTGAGAAGCTACTCATCTGGTATTTAGAAAGATATGATTTA | + |
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Preference number: 6 (lower is better) Translates to: ITNLFASQQPMQRSS*FEKLLIWYLERYDL Trigger: TAAATCATATCTTTCTAAATACCAGATGAGTAGCTTCTCAAACAAGGAAGACCGTTGCATTGGCTGCTGTGAGGCAAATAAATTGGTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000455267.1 |
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| CDS CAA 90 bp | GCTGGCAGAAACTTGATGTCTTCTGCCTTTTCATGTCCAGAAATTTaGGCCTGTAATCTGGTTAATTCTGATTCTTTAGTAAGTAATGCT | + |
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Preference number: 6 (lower is better) Translates to: AGRNLMSSAFSCPEI*ACNLVNSDSLVSNA Trigger: AGCATTACTTACTAAAGAATCAGAATTAACCAGATTACAGGCCAAAATTTCTGGACATGAAAAGGCAGAAGACATCAAGTTTCTGCCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000370276.5 |
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| CDS CAA 90 bp | GATGCAAATTGCTTACAGTATCCTGAGCTTCTTCTAATTCCAATTTaGCCTTCTCTAACTGTTCGTTTAGTTGCTGAACAGAAGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: DANCLQYPELLLIPI*PSLTVRLVAEQKTF Trigger: AAAAGTCTTCTGTTCAGCAACTAAACGAACAGTTAGAGAAGGCAAAATTGGAATTAGAAGAAGCTCAGGATACTGTAAGCAATTTGCATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000447456.1 |
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| CDS GCA 72 bp | TTTTGCAAGGCTTCTGTTAGTTCAGTTTCAGTACTGTaGTGTAACTTTTCTAACTCCTTTACAGCATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: FCKASVSSVSVL*CNFSNSFTAFV Trigger: AACAAATGCTGTAAAGGAGTTAGAAAAGTTACAGCACAGTACTGAAACTGAACTAACAGAAGCCTTGCAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000455267.1 |
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| CDS CCA 72 bp | CAAGTAAGTCCACCTTTAATTTTATACATTCCTCTTTaGACTCCTGCAAACTCTGTTCCTTTTCAATTACCA | + |
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Preference number: 6 (lower is better) Translates to: QVSPPLILYIPL*TPANSVPFQLP Trigger: TGGTAATTGAAAAGGAACAGAGTTTGCAGGAGTCCAAAGAGGAATGTATAAAATTAAAGGTGGACTTACTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000481180.5 |
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| CDS TCA 72 bp | TTGCTTTCCGTCAAGAGTCTATCTAGTGATTCAAGATaGTGTTGTTTGCATATTATATCTTGTTGCAACATG | + |
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Preference number: 6 (lower is better) Translates to: LLSVKSLSSDSR*CCLHIISCCNM Trigger: CATGTTGCAACAAGATATAATATGCAAACAACATCATCTTGAATCACTAGATAGACTCTTGACGGAAAGCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000421014.2 ENST00000455267.1 |
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| CDS TCA 72 bp | TCCTTTATAGTAGTGTATTTTTCCTCTAATGATAATTaGGCCTTCTGTAGTACATCTCTCAATTCCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: SFIVVYFSSNDN*AFCSTSLNSWS Trigger: ACTCCAGGAATTGAGAGATGTACTACAGAAGGCTCAATTATCATTAGAGGAAAAATACACTACTATAAAGGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000343253.11 ENST00000370276.5 ENST00000401026.7 ENST00000455267.1 |
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| CDS CAA 72 bp | AACTTGATGTCTTCTGCCTTTTCATGTCCAGAAATTTaGGCCTGTAATCTGGTTAATTCTGATTCTTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: NLMSSAFSCPEI*ACNLVNSDSLV Trigger: TACTAAAGAATCAGAATTAACCAGATTACAGGCCAAAATTTCTGGACATGAAAAGGCAGAAGACATCAAGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343253.11 ENST00000370276.5 |
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