RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC178 (Homo sapiens)

Ensembl gene IDs: ENSG00000166960

Ensembl transcript IDs: ENST00000300227.12, ENST00000383096.7, ENST00000399177.7, ENST00000403303.5, ENST00000406524.6, ENST00000577766.5, ENST00000579916.5, ENST00000579947.5, ENST00000581524.5, ENST00000581852.5, ENST00000583550.1, ENST00000583930.5

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTaGGGAAGCGAACAGTCACTGTCAACACCGCCAGTAATTATTCTC +
Preference number: 1 (lower is better)
Translates to: TEWQSLYLGQDDREI*GSEQSLSTPPVIIL
Trigger: GAGAATAATTACTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR CCA 90 bp GCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATaGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGT +
Preference number: 1 (lower is better)
Translates to: ACWEVSEFFVHGSVK*QTGECPITLLSELC
Trigger: ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
3UTR-3UTR TCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGATGCTGGGAGGTGAGTaGGTTTTTCGTTCATGGAAG +
Preference number: 2 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQMLGGE*VFRSWK
Trigger: CTTCCATGAACGAAAAACTCACTCACCTCCCAGCAT...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp TGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCAAGCATGCTGGGAGGTaGGTGAGTTTTTCGTTCATG +
Preference number: 2 (lower is better)
Translates to: WAKTIGKSGEANSHCQHRKHAGR*VSFSFM
Trigger: CATGAACGAAAAACTCACTCACCTCCCAGCATGCTT...GCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGTTCCTGACAGCAGCATaGAAGTCACCTGTTTCATTG +
Preference number: 2 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQFLTAA*KSPVSL
Trigger: CAATGAAACAGGTGACTTTCATGCTGCTGTCAGGAA...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp TGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT +
Preference number: 2 (lower is better)
Translates to: WAKTIGKSGEANSHCQHREMANR*MSNYTV
Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...GCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp GCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTATGCTGGGAGGTGAGTaGGTTTTTCGTTCATGGAAG +
Preference number: 2 (lower is better)
Translates to: AFIWAKTIGKSGEANSHCMLGGE*VFRSWK
Trigger: CTTCCATGAACGAAAAACTCACTCACCTCCCAGCAT...ACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR GCA 90 bp GCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTAAGAGTGGCAAAGCATaGTGGGAGGTGAGTGAGTTT +
Preference number: 2 (lower is better)
Translates to: AFIWAKTIGKSGEANSHCKSGKA*WEVSEF
Trigger: AAACTCACTCACCTCCCAGCATGCTTTGCCACTCTT...ACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp GATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGTAATTATTAAGCATGCTGGGAGGTaGGTGAGTTTTTCGTTCATG +
Preference number: 2 (lower is better)
Translates to: DREIWGSEQSLSTPPVIIKHAGR*VSFSFM
Trigger: CATGAACGAAAAACTCACTCACCTCCCAGCATGCTT...AATAATTACTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCATTCCTGACAGCAGCATaGAAGTCACCTGTTTCATTG +
Preference number: 2 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSFLTAA*KSPVSL
Trigger: CAATGAAACAGGTGACTTTCATGCTGCTGTCAGGAA...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp GCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT +
Preference number: 2 (lower is better)
Translates to: AFIWAKTIGKSGEANSHCEMANR*MSNYTV
Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...ACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTATGCTGGGAGGTGAGTaGGTTTTTCGTTCATGGAAG +
Preference number: 2 (lower is better)
Translates to: SDEAKPIAISHPELKLDRMLGGE*VFRSWK
Trigger: CTTCCATGAACGAAAAACTCACTCACCTCCCAGCAT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
3UTR-3UTR TCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT +
Preference number: 2 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSEMANR*MSNYTV
Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAATCGTTCATGGAAGTGTaGAATGGCAAACAGGTGAAT +
Preference number: 2 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGESFMEV*NGKQVN
Trigger: ATTCACCTGTTTGCCATTTCACACTTCCATGAACGA...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp GATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGTAATTATTGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT +
Preference number: 2 (lower is better)
Translates to: DREIWGSEQSLSTPPVIIEMANR*MSNYTV
Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...AATAATTACTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp ACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCATGCTGGGAGGTGAGTaGGTTTTTCGTTCATGGAAG +
Preference number: 2 (lower is better)
Translates to: TLSTEWQSLYLGQDDREIMLGGE*VFRSWK
Trigger: CTTCCATGAACGAAAAACTCACTCACCTCCCAGCAT...GATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp ACACAAACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGAAGCATGCTGGGAGGTaGGTGAGTTTTTCGTTCATG +
Preference number: 2 (lower is better)
Translates to: TQTLSTEWQSLYLGQDDRKHAGR*VSFSFM
Trigger: CATGAACGAAAAACTCACTCACCTCCCAGCATGCTT...CCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR GCA 90 bp ACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCAAGAGTGGCAAAGCATaGTGGGAGGTGAGTGAGTTT +
Preference number: 2 (lower is better)
Translates to: TLSTEWQSLYLGQDDREIKSGKA*WEVSEF
Trigger: AAACTCACTCACCTCCCAGCATGCTTTGCCACTCTT...GATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR CAA 90 bp TTACAGTTTACACAAACTTTAAGTACTGAATGGCAAAGCCTTTATTaGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTG +
Preference number: 2 (lower is better)
Translates to: LQFTQTLSTEWQSLY*GQDDREIWGSEQSL
Trigger: CAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGTAAACTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR TCA 90 bp ACACAAACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGTTCCTGACAGCAGCATaGAAGTCACCTGTTTCATTG +
Preference number: 2 (lower is better)
Translates to: TQTLSTEWQSLYLGQDDRFLTAA*KSPVSL
Trigger: CAATGAAACAGGTGACTTTCATGCTGCTGTCAGGAA...CCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR CCA 72 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTaGGGAAGCGAACAGTCACTGTCAACACCGCCAGTA +
Preference number: 3 (lower is better)
Translates to: QSLYLGQDDREI*GSEQSLSTPPV
Trigger: TACTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR CAA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAATGAGGCAAAGCCAATaGCAATCAGTCACCCAGAGC +
Preference number: 3 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSMRQSQ*QSVTQS
Trigger: GCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCAT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR CAA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAATGAGGCAAAGCCAATaGCAATCAGTCACCCAGAGC +
Preference number: 3 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGEMRQSQ*QSVTQS
Trigger: GCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCAT...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR CAA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAAAGTCACCTGTTTCATaGTTATGGATTTGCTGTGAG +
Preference number: 3 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSKSPVS*LWICCE
Trigger: CTCACAGCAAATCCATAACAATGAAACAGGTGACTT...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR-3UTR CAA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTAAGTCACCTGTTTCATaGTTATGGATTTGCTGTGAG +
Preference number: 3 (lower is better)
Translates to: SDEAKPIAISHPELKLDRKSPVS*LWICCE
Trigger: CTCACAGCAAATCCATAACAATGAAACAGGTGACTT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
3UTR TCA 72 bp ATGATTGAACTACTGAGCCAAGTCAGTGTTGGCAAATaGTGGGCTAAATTATTGATGCTACACACTAATGAA +
Preference number: 3 (lower is better)
Translates to: MIELLSQVSVGK*WAKLLMLHTNE
Trigger: TTCATTAGTGTGTAGCATCAATAATTTAGCCCATCATTTGCCAACACTGACTTGGCTCAGTAGTTCAATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579947.5
3UTR CCA 72 bp ATATTGTTACAGTTTACACAAACTTTAAGTACTGAATaGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAA +
Preference number: 3 (lower is better)
Translates to: ILLQFTQTLSTE*QSLYLGQDDRE
Trigger: TTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGTAAACTGTAACAATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGACCACCAGTTTGAAGTaGTCCTGCCACAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQTTSLK*SCHSVC
Trigger: GCACACACTGTGGCAGGAGCACTTCAAACTGGTGGT...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp TGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCGAGACGAATGGCCTCTaGGAGCAATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: WAKTIGKSGEANSHCQHRETNGL*EQCFHF
Trigger: GAAATGGAAACATTGCTCTCAGAGGCCATTCGTCTC...GCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp TGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCGCCAATGGGAGTTCTTaGAGTTTCCAGACTGACCAA +
Preference number: 4 (lower is better)
Translates to: WAKTIGKSGEANSHCQHRANGSS*SFQTDQ
Trigger: TTGGTCAGTCTGGAAACTTCAAGAACTCCCATTGGC...GCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACAGAGGACCACCAGTTTaGAGTGCTCCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHRGPPV*SAPATV
Trigger: CACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCT...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGAGTTTGAAGTGCTCCTaGCACAGTGTGTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQSLKCS*HSVCIL
Trigger: AAGGATGCACACACTGTGGCAGGAGCACTTCAAACT...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGCATCGTTTTCGCATGTaGCATCTGTCAAAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQHRFRM*HLSKSG
Trigger: TCCAGACTTTGACAGATGGCACATGCGAAAACGATG...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CCA 90 bp TGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCGCTGAGCCTTCAATCTaGCATTTTCACAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: WAKTIGKSGEANSHCQHRAEPSI*HFHRLL
Trigger: TAGAAGCCTGTGAAAATGCCAGATTGAAGGCTCAGC...GCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAAGAGGACCACCAGTTTaGAGTGCTCCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGERGPPV*SAPATV
Trigger: CACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCT...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGACCACCAGTTTGAAGTaGTCCTGCCACAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWTTSLK*SCHSVC
Trigger: GCACACACTGTGGCAGGAGCACTTCAAACTGGTGGT...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACGTTCAGTATTTGACTTaGTTGAGCAGACACGGCTCC +
Preference number: 4 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHVQYLT*LSRHGS
Trigger: GGAGCCGTGTCTGCTCAATCAAGTCAAATACTGAAC...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300227.12
ENST00000383096.7
CDS-3UTR TCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAACCATGCCTTCTCTCTaGGAGCCTTTACTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSTMPSL*EPLLPD
Trigger: GTCAGGAAGTAAAGGCTCTCAGAGAGAAGGCATGGT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp TGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCTTTGTCGAGACTTCTaGTTCTTTCAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: WAKTIGKSGEANSHCQHRLCRDF*FFQLHL
Trigger: AAGATGAAGCTGAAAGAATCAGAAGTCTCGACAAAG...GCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR TCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGCTTTGTCGAGACTTCTaGTTCTTTCAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQLCRDF*FFQLHL
Trigger: AAGATGAAGCTGAAAGAATCAGAAGTCTCGACAAAG...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR TCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTAGAGGACCACCAGTTTaGAGTGCTCCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRRGPPV*SAPATV
Trigger: CACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACAAGCATGCTGGGAGGTaGGTGAGTTTTTCGTTCATG +
Preference number: 4 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHKHAGR*VSFSFM
Trigger: CATGAACGAAAAACTCACTCACCTCCCAGCATGCTT...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACACATTGAGGAGTGATTaGGAGAGACAGCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHTLRSD*ERQLSV
Trigger: CACTGAGAGCTGTCTCTCTCAATCACTCCTCAATGT...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAATCCTTCTCTGCAGCTaGCAGAGCATGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQILLCS*QSMRKG
Trigger: CCCCTTCCTCATGCTCTGTCAGCTGCAGAGAAGGAT...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581852.5
CDS-3UTR GCA 90 bp TGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCTTTGTTTCCCTTATTaGTTCAGTCACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WAKTIGKSGEANSHCQHRLCFPY*FSHFLF
Trigger: GAAGAGGAAGTGACTGAAGCAATAAGGGAAACAAAG...GCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR GCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGGGAAAAGAGTACCAATaGGATAAGCCTCCTTATAGA +
Preference number: 4 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQGKEYQ*DKPPYR
Trigger: TCTATAAGGAGGCTTATCGCATTGGTACTCTTTTCC...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR CCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGGTTCTGCCAGTGACATaGCACATATTGCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQVLPVT*HILLYF
Trigger: AAAATAGAGCAATATGTGCCATGTCACTGGCAGAAC...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR CCA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAGACGATAGGGAAATCTaGGGAAGCGAACAGTCACTG +
Preference number: 4 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSDDREI*GSEQSL
Trigger: CAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTC...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CCA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGGACGATAGGGAAATCTaGGGAAGCGAACAGTCACTG +
Preference number: 4 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWDDREI*GSEQSL
Trigger: CAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTC...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGAGAGCCTTTACTTCCTaGCATGTTAAACCTATATTG +
Preference number: 4 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQRAFTS*HVKPIL
Trigger: CAATATAGGTTTAACATGTCAGGAAGTAAAGGCTCT...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp TGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCGTGAAATCATTTTGTTaGCACAAGGTGCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: WAKTIGKSGEANSHCQHRVKSFC*HKVLEY
Trigger: ATATTCCAGCACCTTGTGTCAACAAAATGATTTCAC...GCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAGAGACGAATGGCCTCTaGGAGCAATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSETNGL*EQCFHF
Trigger: GAAATGGAAACATTGCTCTCAGAGGCCATTCGTCTC...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAATGCTGGGAGGTGAGTaGGTTTTTCGTTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSMLGGE*VFRSWK
Trigger: CTTCCATGAACGAAAAACTCACTCACCTCCCAGCAT...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp GCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTTTCCTGACAGCAGCATaGAAGTCACCTGTTTCATTG +
Preference number: 4 (lower is better)
Translates to: AFIWAKTIGKSGEANSHCFLTAA*KSPVSL
Trigger: CAATGAAACAGGTGACTTTCATGCTGCTGTCAGGAA...ACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAACATTGAGGAGTGATTaGGAGAGACAGCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSTLRSD*ERQLSV
Trigger: CACTGAGAGCTGTCTCTCTCAATCACTCCTCAATGT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp TGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCATTAAGATAGAACATTaGGGAGTGATTGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: WAKTIGKSGEANSHCQHRIKIEH*GVIERD
Trigger: GTCTCTCTCAATCACTCCTCAATGTTCTATCTTAAT...GCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGTCAAACCTTTTCAAATaGTCCTGTATTTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQSNLFK*SCILDS
Trigger: GGAGTCCAAAATACAGGAGCATTTGAAAAGGTTTGA...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR GCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAAGTTTGAAGTGCTCCTaGCACAGTGTGTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSSLKCS*HSVCIL
Trigger: AAGGATGCACACACTGTGGCAGGAGCACTTCAAACT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAAGTTTGAAGTGCTCCTaGCACAGTGTGTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSSLKCS*HSVCIL
Trigger: AAGGATGCACACACTGTGGCAGGAGCACTTCAAACT...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp ACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCAGTTTGAAGTGCTCCTaGCACAGTGTGTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: TEWQSLYLGQDDREIWGSSLKCS*HSVCIL
Trigger: AAGGATGCACACACTGTGGCAGGAGCACTTCAAACT...GCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTACCACCAGTTTGAAGTaGTCCTGCCACAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRTTSLK*SCHSVC
Trigger: GCACACACTGTGGCAGGAGCACTTCAAACTGGTGGT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCATCGTTTTCGCATGTaGCATCTGTCAAAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHHRFRM*HLSKSG
Trigger: TCCAGACTTTGACAGATGGCACATGCGAAAACGATG...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAAAGAGTGGCAAAGCATaGTGGGAGGTGAGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSKSGKA*WEVSEF
Trigger: AAACTCACTCACCTCCCAGCATGCTTTGCCACTCTT...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAAAGAGTGGCAAAGCATaGTGGGAGGTGAGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSKSGKA*WEVSEF
Trigger: AAACTCACTCACCTCCCAGCATGCTTTGCCACTCTT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CCA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGTTGGACTCCACATCTTaGATGTGTGAAATCATTTTG +
Preference number: 4 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQLDSTS*MCEIIL
Trigger: CAAAATGATTTCACACATCCAAGATGTGGAGTCCAA...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp GATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGTAATTATTGTTCAGTATTTGACTTaGTTGAGCAGACACGGCTCC +
Preference number: 4 (lower is better)
Translates to: DREIWGSEQSLSTPPVIIVQYLT*LSRHGS
Trigger: GGAGCCGTGTCTGCTCAATCAAGTCAAATACTGAAC...AATAATTACTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300227.12
ENST00000383096.7
CDS-3UTR TCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAACCATGCCTTCTCTCTaGGAGCCTTTACTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQTMPSL*EPLLPD
Trigger: GTCAGGAAGTAAAGGCTCTCAGAGAGAAGGCATGGT...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCCAATGGGAGTTCTTaGAGTTTCCAGACTGACCAA +
Preference number: 4 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGEANGSS*SFQTDQ
Trigger: TTGGTCAGTCTGGAAACTTCAAGAACTCCCATTGGC...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR GCA 90 bp GATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGTAATTATTCTCTTTCCGCTCAAGTaGCTGGACTTCGTAAATGGA +
Preference number: 4 (lower is better)
Translates to: DREIWGSEQSLSTPPVIILFPLK*LDFVNG
Trigger: TCCATTTACGAAGTCCAGGCACTTGAGCGGAAAGAG...AATAATTACTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR GCA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCATCGTTTTCGCATGTaGCATCTGTCAAAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWHRFRM*HLSKSG
Trigger: TCCAGACTTTGACAGATGGCACATGCGAAAACGATG...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CCA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAGTGGATCATCTTATTTaGGGTGCTTTCGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSVDHLI*GAFEQA
Trigger: TGCTTGCTCGAAAGCACCCCAAATAAGATGATCCAC...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CCA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGGTGGATCATCTTATTTaGGGTGCTTTCGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWVDHLI*GAFEQA
Trigger: TGCTTGCTCGAAAGCACCCCAAATAAGATGATCCAC...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp GATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGTAATTATTGCTGTGACGTCGACATaGGTAGCTAAAGTAAATGCC +
Preference number: 4 (lower is better)
Translates to: DREIWGSEQSLSTPPVIIAVTST*VAKVNA
Trigger: GGCATTTACTTTAGCTACCCATGTCGACGTCACAGC...AATAATTACTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CCA 90 bp GCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTGTTGACACAAGGTGCTaGAATATTTACTACGGCACA +
Preference number: 4 (lower is better)
Translates to: AFIWAKTIGKSGEANSHCVDTRC*NIYYGT
Trigger: TGTGCCGTAGTAAATATTCCAGCACCTTGTGTCAAC...ACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAGCTGAGCCTTCAATCTaGCATTTTCACAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSAEPSI*HFHRLL
Trigger: TAGAAGCCTGTGAAAATGCCAGATTGAAGGCTCAGC...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAGAGACGAATGGCCTCTaGGAGCAATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQETNGL*EQCFHF
Trigger: GAAATGGAAACATTGCTCTCAGAGGCCATTCGTCTC...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTAGAGGACCACCAGTTTaGAGTGCTCCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSRGPPV*SAPATV
Trigger: CACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCT...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGAGAGGACCACCAGTTTaGAGTGCTCCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLRGPPV*SAPATV
Trigger: CACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCT...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAAAGCATGCTGGGAGGTaGGTGAGTTTTTCGTTCATG +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQKHAGR*VSFSFM
Trigger: CATGAACGAAAAACTCACTCACCTCCCAGCATGCTT...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTAAGCATGCTGGGAGGTaGGTGAGTTTTTCGTTCATG +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRKHAGR*VSFSFM
Trigger: CATGAACGAAAAACTCACTCACCTCCCAGCATGCTT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAATTCCTGACAGCAGCATaGAAGTCACCTGTTTCATTG +
Preference number: 4 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGEFLTAA*KSPVSL
Trigger: CAATGAAACAGGTGACTTTCATGCTGCTGTCAGGAA...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAATCCTTCTCTGCAGCTaGCAGAGCCTTTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQILLCS*QSLFKC
Trigger: GCATTTGAAAAGGCTCTGTCAGCTGCAGAGAAGGAT...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579916.5
CDS-3UTR GCA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCATTTGAGACATGGCATTaGCTTCATTTGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSFETWH*LHLSLT
Trigger: GGTCAAGGACAAATGAAGGCAATGCCATGTCTCAAA...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR GCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCATTTGAGACATGGCATTaGCTTCATTTGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSFETWH*LHLSLT
Trigger: GGTCAAGGACAAATGAAGGCAATGCCATGTCTCAAA...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR GCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAACTCTTTCCGCTCAAGTaGCTGGACTTCGTAAATGGA +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQLFPLK*LDFVNG
Trigger: TCCATTTACGAAGTCCAGGCACTTGAGCGGAAAGAG...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR GCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTCTCTTTCCGCTCAAGTaGCTGGACTTCGTAAATGGA +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRLFPLK*LDFVNG
Trigger: TCCATTTACGAAGTCCAGGCACTTGAGCGGAAAGAG...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR GCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAAGTTTGAAGTGCTCCTaGCACAGTGTGTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQSLKCS*HSVCIL
Trigger: AAGGATGCACACACTGTGGCAGGAGCACTTCAAACT...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGACCACCAGTTTGAAGTaGTCCTGCCACAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELTTSLK*SCHSVC
Trigger: GCACACACTGTGGCAGGAGCACTTCAAACTGGTGGT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTAAGAGTGGCAAAGCATaGTGGGAGGTGAGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRKSGKA*WEVSEF
Trigger: AAACTCACTCACCTCCCAGCATGCTTTGCCACTCTT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CCA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCCAAACTTTGAGACATaGCATTGCCTTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWPNFET*HCLHLS
Trigger: GGACAAATGAAGGCAATGCCATGTCTCAAAGTTTGG...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAGCTGTGACGTCGACATaGGTAGCTAAAGTAAATGCC +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQAVTST*VAKVNA
Trigger: GGCATTTACTTTAGCTACCCATGTCGACGTCACAGC...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACAGAGCCTTTACTTCCTaGCATGTTAAACCTATATTG +
Preference number: 4 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHRAFTS*HVKPIL
Trigger: CAATATAGGTTTAACATGTCAGGAAGTAAAGGCTCT...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGACCATGCCTTCTCTCTaGGAGCCTTTACTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELTMPSL*EPLLPD
Trigger: GTCAGGAAGTAAAGGCTCTCAGAGAGAAGGCATGGT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGTATAGAACCAAACTTTaGGACATGGCATTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWYRTKL*DMALPS
Trigger: TGAAGGCAATGCCATGTCTCAAAGTTTGGTTCTATA...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTTCTTCTTTAATTTGCTaGGCCTTCAATCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: AFIWAKTIGKSGEANSHCSSLIC*AFNLAF
Trigger: AAATGCCAGATTGAAGGCTCAGCAAATTAAAGAAGA...ACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTAGAGGACCACCAGTTTaGAGTGCTCCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLRGPPV*SAPATV
Trigger: CACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCT...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT +
Preference number: 4 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSEMANR*MSNYTV
Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACTCAAACCTTTTCAAATaGTCCTGTATTTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHSNLFK*SCILDS
Trigger: GGAGTCCAAAATACAGGAGCATTTGAAAAGGTTTGA...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR GCA 90 bp GCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTTTGTGGAAGAAGTTCTaGTCCATTCTTCAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: AFIWAKTIGKSGEANSHCLWKKF*SILQKK
Trigger: CTTCTTTTGAAGAATGGAGCAGAACTTCTTCCACAA...ACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR GCA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCATGTAGTCTATGTCTaGTTGAATCTTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHHVVYV*LNLCIC
Trigger: GCAAATGCAAAGATTCAAGCAGACATAGACTACATG...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR GCA 90 bp ACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGGAAAAGAGTACCAATaGGATAAGCCTCCTTATAGA +
Preference number: 4 (lower is better)
Translates to: TEWQSLYLGQDDREIWGSGKEYQ*DKPPYR
Trigger: TCTATAAGGAGGCTTATCGCATTGGTACTCTTTTCC...GCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR GCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTACCACCAGTTTGAAGTaGTCCTGCCACAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCTTSLK*SCHSVC
Trigger: GCACACACTGTGGCAGGAGCACTTCAAACTGGTGGT...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTCATCGTTTTCGCATGTaGCATCTGTCAAAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRHRFRM*HLSKSG
Trigger: TCCAGACTTTGACAGATGGCACATGCGAAAACGATG...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAACATCGTTTTCGCATGTaGCATCTGTCAAAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQHRFRM*HLSKSG
Trigger: TCCAGACTTTGACAGATGGCACATGCGAAAACGATG...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAGTGGATCATCTTATTTaGGGTGCTTTCGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQVDHLI*GAFEQA
Trigger: TGCTTGCTCGAAAGCACCCCAAATAAGATGATCCAC...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAACCAAACTTTGAGACATaGCATTGCCTTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGEPNFET*HCLHLS
Trigger: GGACAAATGAAGGCAATGCCATGTCTCAAAGTTTGG...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CCA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACTTGGACTCCACATCTTaGATGTGTGAAATCATTTTG +
Preference number: 4 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHLDSTS*MCEIIL
Trigger: CAAAATGATTTCACACATCCAAGATGTGGAGTCCAA...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CCA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAAATGCTCCTGTATTTTaGACTCCACATCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSNAPVF*TPHLGC
Trigger: ACATCCAAGATGTGGAGTCCAAAATACAGGAGCATT...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CCA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCATTTGACCTCTTTCACTaGTGTAGTTACACTCCAATC +
Preference number: 4 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSFDLFH*CSYTPI
Trigger: GATTGGAGTGTAACTACACCAGTGAAAGAGGTCAAA...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAGCTGAGCCTTCAATCTaGCATTTTCACAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQAEPSI*HFHRLL
Trigger: TAGAAGCCTGTGAAAATGCCAGATTGAAGGCTCAGC...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CCA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGGTTCTGCCAGTGACATaGCACATATTGCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWVLPVT*HILLYF
Trigger: AAAATAGAGCAATATGTGCCATGTCACTGGCAGAAC...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGGACGATAGGGAAATCTaGGGAAGCGAACAGTCACTG +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELDDREI*GSEQSL
Trigger: CAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTC...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAAGAGCCTTTACTTCCTaGCATGTTAAACCTATATTG +
Preference number: 4 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSRAFTS*HVKPIL
Trigger: CAATATAGGTTTAACATGTCAGGAAGTAAAGGCTCT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGTTGAAGTTTCCAGACTaGCCAAGAGTCAATTTTCAT +
Preference number: 4 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWLKFPD*PRVNFH
Trigger: ATGAAAATTGACTCTTGGTCAGTCTGGAAACTTCAA...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCATCTTCTTTAATTTGCTaGGCCTTCAATCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSSSLIC*AFNLAF
Trigger: AAATGCCAGATTGAAGGCTCAGCAAATTAAAGAAGA...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGTCTTCTTTAATTTGCTaGGCCTTCAATCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWSSLIC*AFNLAF
Trigger: AAATGCCAGATTGAAGGCTCAGCAAATTAAAGAAGA...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT +
Preference number: 4 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGEEMANR*MSNYTV
Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCGTTCATGGAAGTGTaGAATGGCAAACAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRSFMEV*NGKQVN
Trigger: ATTCACCTGTTTGCCATTTCACACTTCCATGAACGA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAATCGTTCATGGAAGTGTaGAATGGCAAACAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQSFMEV*NGKQVN
Trigger: ATTCACCTGTTTGCCATTTCACACTTCCATGAACGA...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGATGCTGGGAGGTGAGTaGGTTTTTCGTTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELMLGGE*VFRSWK
Trigger: CTTCCATGAACGAAAAACTCACTCACCTCCCAGCAT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAGTCTTTAAAAATTGCTaGGCGTTTACTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSVFKNC*AFTLSF
Trigger: GAAACTGAGAGTAAACGCTCAGCAATTTTTAAAGAC...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR TCA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGGTCTTTAAAAATTGCTaGGCGTTTACTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWVFKNC*AFTLSF
Trigger: GAAACTGAGAGTAAACGCTCAGCAATTTTTAAAGAC...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR GCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAATTTGAGACATGGCATTaGCTTCATTTGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQFETWH*LHLSLT
Trigger: GGTCAAGGACAAATGAAGGCAATGCCATGTCTCAAA...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR GCA 90 bp GCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTAATGTTTCCATTTCCTaGTTTAACTCTGGACACTTT +
Preference number: 4 (lower is better)
Translates to: AFIWAKTIGKSGEANSHCNVSIS*FNSGHF
Trigger: AAAGTGTCCAGAGTTAAAGCAGGAAATGGAAACATT...ACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR GCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGGCCTCATGTTCTTTCTaGACAGCCAATGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELASCSF*TANGSS
Trigger: AGAACTCCCATTGGCTGTGCAGAAAGAACATGAGGC...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp ACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCCTCTTTCCGCTCAAGTaGCTGGACTTCGTAAATGGA +
Preference number: 4 (lower is better)
Translates to: TLSTEWQSLYLGQDDREILFPLK*LDFVNG
Trigger: TCCATTTACGAAGTCCAGGCACTTGAGCGGAAAGAG...GATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR GCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTACCACCAGTTTGAAGTaGTCCTGCCACAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFTTSLK*SCHSVC
Trigger: GCACACACTGTGGCAGGAGCACTTCAAACTGGTGGT...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTACCACCAGTTTGAAGTaGTCCTGCCACAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLTTSLK*SCHSVC
Trigger: GCACACACTGTGGCAGGAGCACTTCAAACTGGTGGT...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGAAGAGTGGCAAAGCATaGTGGGAGGTGAGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELKSGKA*WEVSEF
Trigger: AAACTCACTCACCTCCCAGCATGCTTTGCCACTCTT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp ACACAAACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGAAGAGTGGCAAAGCATaGTGGGAGGTGAGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TQTLSTEWQSLYLGQDDRKSGKA*WEVSEF
Trigger: AAACTCACTCACCTCCCAGCATGCTTTGCCACTCTT...CCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTCCAAACTTTGAGACATaGCATTGCCTTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRPNFET*HCLHLS
Trigger: GGACAAATGAAGGCAATGCCATGTCTCAAAGTTTGG...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGGCTGTGACGTCGACATaGGTAGCTAAAGTAAATGCC +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELAVTST*VAKVNA
Trigger: GGCATTTACTTTAGCTACCCATGTCGACGTCACAGC...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTGTTGACACAAGGTGCTaGAATATTTACTACGGCACA +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRVDTRC*NIYYGT
Trigger: TGTGCCGTAGTAAATATTCCAGCACCTTGTGTCAAC...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGGACGATAGGGAAATCTaGGGAAGCGAACAGTCACTG +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLDDREI*GSEQSL
Trigger: CAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTC...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGACGATAGGGAAATCTaGGGAAGCGAACAGTCACTG +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSDDREI*GSEQSL
Trigger: CAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTC...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
3UTR CAA 72 bp ACACAAACTTTAAGTACTGAATGGCAAAGCCTTTATTaGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAA +
Preference number: 4 (lower is better)
Translates to: TQTLSTEWQSLY*GQDDREIWGSE
Trigger: TTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTACCATGCCTTCTCTCTaGGAGCCTTTACTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLTMPSL*EPLLPD
Trigger: GTCAGGAAGTAAAGGCTCTCAGAGAGAAGGCATGGT...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTATAGAACCAAACTTTaGGACATGGCATTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRYRTKL*DMALPS
Trigger: TGAAGGCAATGCCATGTCTCAAAGTTTGGTTCTATA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAATATAGAACCAAACTTTaGGACATGGCATTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQYRTKL*DMALPS
Trigger: TGAAGGCAATGCCATGTCTCAAAGTTTGGTTCTATA...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAGACGAATGGCCTCTaGGAGCAATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSETNGL*EQCFHF
Trigger: GAAATGGAAACATTGCTCTCAGAGGCCATTCGTCTC...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAATTGAAGTTTCCAGACTaGCCAAGAGTCAATTTTCAT +
Preference number: 4 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGELKFPD*PRVNFH
Trigger: ATGAAAATTGACTCTTGGTCAGTCTGGAAACTTCAA...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGCCAATGGGAGTTCTTaGAGTTTCCAGACTGACCAA +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCANGSS*SFQTDQ
Trigger: TTGGTCAGTCTGGAAACTTCAAGAACTCCCATTGGC...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAACTTTGTCGAGACTTCTaGTTCTTTCAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQLCRDF*FFQLHL
Trigger: AAGATGAAGCTGAAAGAATCAGAAGTCTCGACAAAG...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCATCCTTCTCTGCAGCTaGCAGAGCTGTTTCTTATCT +
Preference number: 4 (lower is better)
Translates to: TLSTEWQSLYLGQDDREIILLCS*QSCFLS
Trigger: AGATAAGAAACAGCTCTGTCAGCTGCAGAGAAGGAT...GATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDREMANR*MSNYTV
Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGATGCTGGGAGGTGAGTaGGTTTTTCGTTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLMLGGE*VFRSWK
Trigger: CTTCCATGAACGAAAAACTCACTCACCTCCCAGCAT...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTATGCTGGGAGGTGAGTaGGTTTTTCGTTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSMLGGE*VFRSWK
Trigger: CTTCCATGAACGAAAAACTCACTCACCTCCCAGCAT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTATGCTGGGAGGTGAGTaGGTTTTTCGTTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCMLGGE*VFRSWK
Trigger: CTTCCATGAACGAAAAACTCACTCACCTCCCAGCAT...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGAAGCATGCTGGGAGGTaGGTGAGTTTTTCGTTCATG +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLKHAGR*VSFSFM
Trigger: CATGAACGAAAAACTCACTCACCTCCCAGCATGCTT...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTAAGCATGCTGGGAGGTaGGTGAGTTTTTCGTTCATG +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSKHAGR*VSFSFM
Trigger: CATGAACGAAAAACTCACTCACCTCCCAGCATGCTT...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTTCCTGACAGCAGCATaGAAGTCACCTGTTTCATTG +
Preference number: 4 (lower is better)
Translates to: TLSTEWQSLYLGQDDREIFLTAA*KSPVSL
Trigger: CAATGAAACAGGTGACTTTCATGCTGCTGTCAGGAA...GATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTTCCTGACAGCAGCATaGAAGTCACCTGTTTCATTG +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELFLTAA*KSPVSL
Trigger: CAATGAAACAGGTGACTTTCATGCTGCTGTCAGGAA...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAATTAAGATAGAACATTaGGGAGTGATTGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGEIKIEH*GVIERD
Trigger: GTCTCTCTCAATCACTCCTCAATGTTCTATCTTAAT...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTGCAGCTGACAGAGCATaGGGAAGGGGAAAATCTGAT +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLAADRA*GRGKSD
Trigger: ATCAGATTTTCCCCTTCCTCATGCTCTGTCAGCTGC...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581852.5
CDS-3UTR GCA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAAATGTTTCCATTTCCTaGTTTAACTCTGGACACTTT +
Preference number: 4 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSNVSIS*FNSGHF
Trigger: AAAGTGTCCAGAGTTAAAGCAGGAAATGGAAACATT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR GCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGGCCTCATGTTCTTTCTaGACAGCCAATGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLASCSF*TANGSS
Trigger: AGAACTCCCATTGGCTGTGCAGAAAGAACATGAGGC...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGCCTCATGTTCTTTCTaGACAGCCAATGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSASCSF*TANGSS
Trigger: AGAACTCCCATTGGCTGTGCAGAAAGAACATGAGGC...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTGCCTCATGTTCTTTCTaGACAGCCAATGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSASCSF*TANGSS
Trigger: AGAACTCCCATTGGCTGTGCAGAAAGAACATGAGGC...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTCTTTGTTTCCCTTATTaGTTCAGTCACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRLCFPY*FSHFLF
Trigger: GAAGAGGAAGTGACTGAAGCAATAAGGGAAACAAAG...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTGGAAAAGAGTACCAATaGGATAAGCCTCCTTATAGA +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRGKEYQ*DKPPYR
Trigger: TCTATAAGGAGGCTTATCGCATTGGTACTCTTTTCC...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR GCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGCTCTTTCCGCTCAAGTaGCTGGACTTCGTAAATGGA +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLLFPLK*LDFVNG
Trigger: TCCATTTACGAAGTCCAGGCACTTGAGCGGAAAGAG...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR GCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTAGTTTGAAGTGCTCCTaGCACAGTGTGTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCSLKCS*HSVCIL
Trigger: AAGGATGCACACACTGTGGCAGGAGCACTTCAAACT...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTAAGAGTGGCAAAGCATaGTGGGAGGTGAGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSKSGKA*WEVSEF
Trigger: AAACTCACTCACCTCCCAGCATGCTTTGCCACTCTT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTAAGAGTGGCAAAGCATaGTGGGAGGTGAGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSKSGKA*WEVSEF
Trigger: AAACTCACTCACCTCCCAGCATGCTTTGCCACTCTT...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTGCTGTGACGTCGACATaGGTAGCTAAAGTAAATGCC +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSAVTST*VAKVNA
Trigger: GGCATTTACTTTAGCTACCCATGTCGACGTCACAGC...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAATTTGACCTCTTTCACTaGTGTAGTTACACTCCAATC +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQFDLFH*CSYTPI
Trigger: GATTGGAGTGTAACTACACCAGTGAAAGAGGTCAAA...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTGTTCTGCCAGTGACATaGCACATATTGCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRVLPVT*HILLYF
Trigger: AAAATAGAGCAATATGTGCCATGTCACTGGCAGAAC...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAGTTCTGCCAGTGACATaGCACATATTGCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQVLPVT*HILLYF
Trigger: AAAATAGAGCAATATGTGCCATGTCACTGGCAGAAC...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGGGCAAAGCCTTTATTTaGGCCAAGACGATAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELGKAFI*AKTIGK
Trigger: TTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCC...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAGTGAAATCATTTTGTTaGCACAAGGTGCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQVKSFC*HKVLEY
Trigger: ATATTCCAGCACCTTGTGTCAACAAAATGATTTCAC...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTGAGACGAATGGCCTCTaGGAGCAATGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLETNGL*EQCFHF
Trigger: GAAATGGAAACATTGCTCTCAGAGGCCATTCGTCTC...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTTGAAGTTTCCAGACTaGCCAAGAGTCAATTTTCAT +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRLKFPD*PRVNFH
Trigger: ATGAAAATTGACTCTTGGTCAGTCTGGAAACTTCAA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTGCCAATGGGAGTTCTTaGAGTTTCCAGACTGACCAA +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLANGSS*SFQTDQ
Trigger: TTGGTCAGTCTGGAAACTTCAAGAACTCCCATTGGC...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGATCCTTCTCTGCAGCTaGCAGAGCTGTTTCTTATCT +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLILLCS*QSCFLS
Trigger: AGATAAGAAACAGCTCTGTCAGCTGCAGAGAAGGAT...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp ACACAAACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGTCGTTCATGGAAGTGTaGAATGGCAAACAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: TQTLSTEWQSLYLGQDDRSFMEV*NGKQVN
Trigger: ATTCACCTGTTTGCCATTTCACACTTCCATGAACGA...CCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTCGTTCATGGAAGTGTaGAATGGCAAACAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELSFMEV*NGKQVN
Trigger: ATTCACCTGTTTGCCATTTCACACTTCCATGAACGA...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTTTCCTGACAGCAGCATaGAAGTCACCTGTTTCATTG +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSFLTAA*KSPVSL
Trigger: CAATGAAACAGGTGACTTTCATGCTGCTGTCAGGAA...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTACATTGAGGAGTGATTaGGAGAGACAGCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLTLRSD*ERQLSV
Trigger: CACTGAGAGCTGTCTCTCTCAATCACTCCTCAATGT...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTATTAAGATAGAACATTaGGGAGTGATTGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRIKIEH*GVIERD
Trigger: GTCTCTCTCAATCACTCCTCAATGTTCTATCTTAAT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTCAAACCTTTTCAAATaGTCCTGTATTTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRSNLFK*SCILDS
Trigger: GGAGTCCAAAATACAGGAGCATTTGAAAAGGTTTGA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTGCCTCATGTTCTTTCTaGACAGCCAATGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLASCSF*TANGSS
Trigger: AGAACTCCCATTGGCTGTGCAGAAAGAACATGAGGC...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTCTCTTTCCGCTCAAGTaGCTGGACTTCGTAAATGGA +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLLFPLK*LDFVNG
Trigger: TCCATTTACGAAGTCCAGGCACTTGAGCGGAAAGAG...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR GCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGCATCGTTTTCGCATGTaGCATCTGTCAAAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLHRFRM*HLSKSG
Trigger: TCCAGACTTTGACAGATGGCACATGCGAAAACGATG...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTCATCGTTTTCGCATGTaGCATCTGTCAAAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSHRFRM*HLSKSG
Trigger: TCCAGACTTTGACAGATGGCACATGCGAAAACGATG...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGCAGAGCCTTTTCAAATaGTCCTGTATTTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELQSLFK*SCILDS
Trigger: GGAGTCCAAAATACAGGAGCATTTGAAAAGGCTCTG...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579916.5
CDS-3UTR CCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGTGGATCATCTTATTTaGGGTGCTTTCGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSVDHLI*GAFEQA
Trigger: TGCTTGCTCGAAAGCACCCCAAATAAGATGATCCAC...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTGTGGATCATCTTATTTaGGGTGCTTTCGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSVDHLI*GAFEQA
Trigger: TGCTTGCTCGAAAGCACCCCAAATAAGATGATCCAC...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTGCTGTGACGTCGACATaGGTAGCTAAAGTAAATGCC +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFAVTST*VAKVNA
Trigger: GGCATTTACTTTAGCTACCCATGTCGACGTCACAGC...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTGCTGTGACGTCGACATaGGTAGCTAAAGTAAATGCC +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLAVTST*VAKVNA
Trigger: GGCATTTACTTTAGCTACCCATGTCGACGTCACAGC...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTTGGACTCCACATCTTaGATGTGTGAAATCATTTTG +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRLDSTS*MCEIIL
Trigger: CAAAATGATTTCACACATCCAAGATGTGGAGTCCAA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGCTGAGCCTTCAATCTaGCATTTTCACAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSAEPSI*HFHRLL
Trigger: TAGAAGCCTGTGAAAATGCCAGATTGAAGGCTCAGC...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGGCAAAGCCTTTATTTaGGCCAAGACGATAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSGKAFI*AKTIGK
Trigger: TTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCC...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CCA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTACTTTAAGTACTGAATaGCAAAGCCTTTATTTGGGC +
Preference number: 4 (lower is better)
Translates to: SDEAKPIAISHPELKLDRTLSTE*QSLYLG
Trigger: GCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTATCCTTCTCTGCAGCTaGCAGAGCTGTTTCTTATCT +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFILLCS*QSCFLS
Trigger: AGATAAGAAACAGCTCTGTCAGCTGCAGAGAAGGAT...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR TCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELEMANR*MSNYTV
Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTCGTTCATGGAAGTGTaGAATGGCAAACAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLSFMEV*NGKQVN
Trigger: ATTCACCTGTTTGCCATTTCACACTTCCATGAACGA...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTTTCCTGACAGCAGCATaGAAGTCACCTGTTTCATTG +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLFLTAA*KSPVSL
Trigger: CAATGAAACAGGTGACTTTCATGCTGCTGTCAGGAA...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR GCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTTTTGAGACATGGCATTaGCTTCATTTGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCFETWH*LHLSLT
Trigger: GGTCAAGGACAAATGAAGGCAATGCCATGTCTCAAA...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR GCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTTTGAGACATGGCATTaGCTTCATTTGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSFETWH*LHLSLT
Trigger: GGTCAAGGACAAATGAAGGCAATGCCATGTCTCAAA...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTCCAAACTTTGAGACATaGCATTGCCTTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCPNFET*HCLHLS
Trigger: GGACAAATGAAGGCAATGCCATGTCTCAAAGTTTGG...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTCCAAACTTTGAGACATaGCATTGCCTTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSPNFET*HCLHLS
Trigger: GGACAAATGAAGGCAATGCCATGTCTCAAAGTTTGG...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGGTTGACACAAGGTGCTaGAATATTTACTACGGCACA +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLVDTRC*NIYYGT
Trigger: TGTGCCGTAGTAAATATTCCAGCACCTTGTGTCAAC...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp ACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCAATGCTCCTGTATTTTaGACTCCACATCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: TLSTEWQSLYLGQDDREINAPVF*TPHLGC
Trigger: ACATCCAAGATGTGGAGTCCAAAATACAGGAGCATT...GATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGAATGCTCCTGTATTTTaGACTCCACATCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELNAPVF*TPHLGC
Trigger: ACATCCAAGATGTGGAGTCCAAAATACAGGAGCATT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTGCTGAGCCTTCAATCTaGCATTTTCACAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLAEPSI*HFHRLL
Trigger: TAGAAGCCTGTGAAAATGCCAGATTGAAGGCTCAGC...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTGGCAAAGCCTTTATTTaGGCCAAGACGATAGGGAAA +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLGKAFI*AKTIGK
Trigger: TTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCC...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTGGCAAAGCCTTTATTTaGGCCAAGACGATAGGGAAA +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFGKAFI*AKTIGK
Trigger: TTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCC...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTATAGAACCAAACTTTaGGACATGGCATTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSYRTKL*DMALPS
Trigger: TGAAGGCAATGCCATGTCTCAAAGTTTGGTTCTATA...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTATAGAACCAAACTTTaGGACATGGCATTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLYRTKL*DMALPS
Trigger: TGAAGGCAATGCCATGTCTCAAAGTTTGGTTCTATA...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGGTCATTTTACTTTCATaGAAACCTTCACTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELVILLS*KPSLFS
Trigger: GGAGAACAGTGAAGGTTTTCATGAAAGTAAAATGAC...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGGTGAAATCATTTTGTTaGCACAAGGTGCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELVKSFC*HKVLEY
Trigger: ATATTCCAGCACCTTGTGTCAACAAAATGATTTCAC...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTCTTTGTCGAGACTTCTaGTTCTTTCAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSLCRDF*FFQLHL
Trigger: AAGATGAAGCTGAAAGAATCAGAAGTCTCGACAAAG...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR TCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTCTTTGTCGAGACTTCTaGTTCTTTCAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCLCRDF*FFQLHL
Trigger: AAGATGAAGCTGAAAGAATCAGAAGTCTCGACAAAG...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR TCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCEMANR*MSNYTV
Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTGAAATGGCAAACAGGTaGATGTCCAATTACACTGTT +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSEMANR*MSNYTV
Trigger: AACAGTGTAATTGGACATTCACCTGTTTGCCATTTC...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTTCGTTCATGGAAGTGTaGAATGGCAAACAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLSFMEV*NGKQVN
Trigger: ATTCACCTGTTTGCCATTTCACACTTCCATGAACGA...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ACACAAACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGTCTTTAAAAATTGCTaGGCGTTTACTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TQTLSTEWQSLYLGQDDRVFKNC*AFTLSF
Trigger: GAAACTGAGAGTAAACGCTCAGCAATTTTTAAAGAC...CCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR TCA 90 bp ACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCATTAAGATAGAACATTaGGGAGTGATTGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: TLSTEWQSLYLGQDDREIIKIEH*GVIERD
Trigger: GTCTCTCTCAATCACTCCTCAATGTTCTATCTTAAT...GATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTCAAACCTTTTCAAATaGTCCTGTATTTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELSNLFK*SCILDS
Trigger: GGAGTCCAAAATACAGGAGCATTTGAAAAGGTTTGA...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTTGTGGAAGAAGTTCTaGTCCATTCTTCAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELLWKKF*SILQKK
Trigger: CTTCTTTTGAAGAATGGAGCAGAACTTCTTCCACAA...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGCTTTGTTTCCCTTATTaGTTCAGTCACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLLCFPY*FSHFLF
Trigger: GAAGAGGAAGTGACTGAAGCAATAAGGGAAACAAAG...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTCTTTGTTTCCCTTATTaGTTCAGTCACTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSLCFPY*FSHFLF
Trigger: GAAGAGGAAGTGACTGAAGCAATAAGGGAAACAAAG...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGGGAAAAGAGTACCAATaGGATAAGCCTCCTTATAGA +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLGKEYQ*DKPPYR
Trigger: TCTATAAGGAGGCTTATCGCATTGGTACTCTTTTCC...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR GCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTGGAAAAGAGTACCAATaGGATAAGCCTCCTTATAGA +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSGKEYQ*DKPPYR
Trigger: TCTATAAGGAGGCTTATCGCATTGGTACTCTTTTCC...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTGTTGACACAAGGTGCTaGAATATTTACTACGGCACA +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLVDTRC*NIYYGT
Trigger: TGTGCCGTAGTAAATATTCCAGCACCTTGTGTCAAC...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTAATGCTCCTGTATTTTaGACTCCACATCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCNAPVF*TPHLGC
Trigger: ACATCCAAGATGTGGAGTCCAAAATACAGGAGCATT...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTTGACCTCTTTCACTaGTGTAGTTACACTCCAATC +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLFDLFH*CSYTPI
Trigger: GATTGGAGTGTAACTACACCAGTGAAAGAGGTCAAA...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTTTTGACCTCTTTCACTaGTGTAGTTACACTCCAATC +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCFDLFH*CSYTPI
Trigger: GATTGGAGTGTAACTACACCAGTGAAAGAGGTCAAA...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGACTTTAAGTACTGAATaGCAAAGCCTTTATTTGGGC +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELTLSTE*QSLYLG
Trigger: GCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTGTCATTTTACTTTCATaGAAACCTTCACTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSVILLS*KPSLFS
Trigger: GGAGAACAGTGAAGGTTTTCATGAAAGTAAAATGAC...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGGTCATTTTACTTTCATaGAAACCTTCACTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLVILLS*KPSLFS
Trigger: GGAGAACAGTGAAGGTTTTCATGAAAGTAAAATGAC...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGGTGAAATCATTTTGTTaGCACAAGGTGCTGGAATAT +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLVKSFC*HKVLEY
Trigger: ATATTCCAGCACCTTGTGTCAACAAAATGATTTCAC...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTTTGAAGTTTCCAGACTaGCCAAGAGTCAATTTTCAT +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCLKFPD*PRVNFH
Trigger: ATGAAAATTGACTCTTGGTCAGTCTGGAAACTTCAA...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTTCTTCTTTAATTTGCTaGGCCTTCAATCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSSSLIC*AFNLAF
Trigger: AAATGCCAGATTGAAGGCTCAGCAAATTAAAGAAGA...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTCTTCTTTAATTTGCTaGGCCTTCAATCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLSSLIC*AFNLAF
Trigger: AAATGCCAGATTGAAGGCTCAGCAAATTAAAGAAGA...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTCTTTGTCGAGACTTCTaGTTCTTTCAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFLCRDF*FFQLHL
Trigger: AAGATGAAGCTGAAAGAATCAGAAGTCTCGACAAAG...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR GCA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTGTGGAAGAAGTTCTaGTCCATTCTTCAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: FFVHGSVKWQTGECPITLLWKKF*SILQKK
Trigger: CTTCTTTTGAAGAATGGAGCAGAACTTCTTCCACAA...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTTTGTGGAAGAAGTTCTaGTCCATTCTTCAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCLWKKF*SILQKK
Trigger: CTTCTTTTGAAGAATGGAGCAGAACTTCTTCCACAA...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGAATGTTTCCATTTCCTaGTTTAACTCTGGACACTTT +
Preference number: 4 (lower is better)
Translates to: GSVKWQTGECPITLLSELNVSIS*FNSGHF
Trigger: AAAGTGTCCAGAGTTAAAGCAGGAAATGGAAACATT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTCATGTAGTCTATGTCTaGTTGAATCTTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSHVVYV*LNLCIC
Trigger: GCAAATGCAAAGATTCAAGCAGACATAGACTACATG...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTCATGTAGTCTATGTCTaGTTGAATCTTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSHVVYV*LNLCIC
Trigger: GCAAATGCAAAGATTCAAGCAGACATAGACTACATG...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTGGAAAAGAGTACCAATaGGATAAGCCTCCTTATAGA +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFGKEYQ*DKPPYR
Trigger: TCTATAAGGAGGCTTATCGCATTGGTACTCTTTTCC...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTTTGGACTCCACATCTTaGATGTGTGAAATCATTTTG +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCLDSTS*MCEIIL
Trigger: CAAAATGATTTCACACATCCAAGATGTGGAGTCCAA...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTTTGGACTCCACATCTTaGATGTGTGAAATCATTTTG +
Preference number: 4 (lower is better)
Translates to: VHGSVKWQTGECPITLLSLDSTS*MCEIIL
Trigger: CAAAATGATTTCACACATCCAAGATGTGGAGTCCAA...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTAATGCTCCTGTATTTTaGACTCCACATCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFNAPVF*TPHLGC
Trigger: ACATCCAAGATGTGGAGTCCAAAATACAGGAGCATT...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTAATGCTCCTGTATTTTaGACTCCACATCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLNAPVF*TPHLGC
Trigger: ACATCCAAGATGTGGAGTCCAAAATACAGGAGCATT...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTTTTGACCTCTTTCACTaGTGTAGTTACACTCCAATC +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLFDLFH*CSYTPI
Trigger: GATTGGAGTGTAACTACACCAGTGAAAGAGGTCAAA...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTGTTCTGCCAGTGACATaGCACATATTGCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFVLPVT*HILLYF
Trigger: AAAATAGAGCAATATGTGCCATGTCACTGGCAGAAC...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CCA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTACTTTAAGTACTGAATaGCAAAGCCTTTATTTGGGC +
Preference number: 4 (lower is better)
Translates to: SVKWQTGECPITLLSELCTLSTE*QSLYLG
Trigger: GCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR TCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTGTCATTTTACTTTCATaGAAACCTTCACTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLVILLS*KPSLFS
Trigger: GGAGAACAGTGAAGGTTTTCATGAAAGTAAAATGAC...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTGTCATTTTACTTTCATaGAAACCTTCACTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFVILLS*KPSLFS
Trigger: GGAGAACAGTGAAGGTTTTCATGAAAGTAAAATGAC...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR TCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTTTGAAGTTTCCAGACTaGCCAAGAGTCAATTTTCAT +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLLKFPD*PRVNFH
Trigger: ATGAAAATTGACTCTTGGTCAGTCTGGAAACTTCAA...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR TCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTGTCTTTAAAAATTGCTaGGCGTTTACTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFVFKNC*AFTLSF
Trigger: GAAACTGAGAGTAAACGCTCAGCAATTTTTAAAGAC...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR GCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTTCAAACCTTTTCAAATaGTCCTGTATTTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLSNLFK*SCILDS
Trigger: GGAGTCCAAAATACAGGAGCATTTGAAAAGGTTTGA...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTTGTGGAAGAAGTTCTaGTCCATTCTTCAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFLWKKF*SILQKK
Trigger: CTTCTTTTGAAGAATGGAGCAGAACTTCTTCCACAA...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTAATGTTTCCATTTCCTaGTTTAACTCTGGACACTTT +
Preference number: 4 (lower is better)
Translates to: WQTGECPITLLSELCDFSNVSIS*FNSGHF
Trigger: AAAGTGTCCAGAGTTAAAGCAGGAAATGGAAACATT...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR GCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTCATGTAGTCTATGTCTaGTTGAATCTTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFHVVYV*LNLCIC
Trigger: GCAAATGCAAAGATTCAAGCAGACATAGACTACATG...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CCA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTACTTTAAGTACTGAATaGCAAAGCCTTTATTTGGGC +
Preference number: 4 (lower is better)
Translates to: TGECPITLLSELCDFSCLTLSTE*QSLYLG
Trigger: GCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR GCA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTAATGTTTCCATTTCCTaGTTTAACTCTGGACACTTT +
Preference number: 4 (lower is better)
Translates to: KWQTGECPITLLSELCDFNVSIS*FNSGHF
Trigger: AAAGTGTCCAGAGTTAAAGCAGGAAATGGAAACATT...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS TCA 90 bp TGGAGACGAGTCAACGCCCCTTCGTACAGCAGTGAGGTTAGAACGTaGGGGGATCACAGACTTCGTCCACCTTCGGGAGGACCGCAGGAC +
Preference number: 5 (lower is better)
Translates to: WRRVNAPSYSSEVRT*GDHRLRPPSGGPQD
Trigger: GTCCTGCGGTCCTCCCGAAGGTGGACGAAGTCTGTGATCCCCTCACGTTCTAACCTCACTGCTGTACGAAGGGGCGTTGACTCGTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577766.5
CDS-3UTR CAA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGTGGCAAAGCCTTTATTaGGGCCAAGACGATAGGGAA +
Preference number: 5 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQWQSLY*GQDDRE
Trigger: TTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCA...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAAAGAGGACCACCAGTTaGAAGTGCTCCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSKRTTS*KCSCHS
Trigger: ACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCTT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGTCATCTGTCTTGTGTTaGGTTAGGTGGAAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQSSVLC*VRWKRV
Trigger: TACTCTTTTCCACCTAACCAAACACAAGACAGATGA...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR CAA 90 bp TGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCAGCATCCAAGATACATaGGTTGTTTGCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: WAKTIGKSGEANSHCQHRSIQDT*VVCLTI
Trigger: GATGGTTAAGCAAACAACCAATGTATCTTGGATGCT...GCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAATGAGGCAAAGCCAATaGCAATCAGTCACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSMRQSQ*QSVTQS
Trigger: GCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCAT...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACTGTTCAGTATTTGACTaGATTGAGCAGACACGGCTC +
Preference number: 5 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHCSVFD*IEQTRL
Trigger: GAGCCGTGTCTGCTCAATCAAGTCAAATACTGAACA...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300227.12
ENST00000383096.7
CDS-3UTR CAA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCTCTTTTCTCCTGGTTaGACCTCTTTCACTGGTGTA +
Preference number: 5 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHLFSPG*TSFTGV
Trigger: TACACCAGTGAAAGAGGTCAAACCAGGAGAAAAGAG...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CAA 90 bp GCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACCGCCAGCTAACAGAATGTTCTTaGTCGAGACTTCTGATTCTT +
Preference number: 5 (lower is better)
Translates to: AKTIGKSGEANSHCQHRQLTECS*SRLLIL
Trigger: AAGAATCAGAAGTCTCGACAAAGAACATTCTGTTAG...CTGGCGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300227.12
CDS-3UTR CAA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAAAGAGGACCACCAGTTaGAAGTGCTCCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQKRTTS*KCSCHS
Trigger: ACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCTT...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTAAGAGGACCACCAGTTaGAAGTGCTCCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: SDEAKPIAISHPELKLDRKRTTS*KCSCHS
Trigger: ACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCTT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp ACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCTGGCAAAGCCTTTATTaGGGCCAAGACGATAGGGAA +
Preference number: 5 (lower is better)
Translates to: TEWQSLYLGQDDREIWGSWQSLY*GQDDRE
Trigger: TTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCA...GCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp GCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTAAATGCTCCTGTATTTaGGACTCCACATCTTGGATG +
Preference number: 5 (lower is better)
Translates to: AFIWAKTIGKSGEANSHCKCSCI*DSTSWM
Trigger: CATCCAAGATGTGGAGTCCAAAATACAGGAGCATTT...ACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CAA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTATGAGGCAAAGCCAATaGCAATCAGTCACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: SDEAKPIAISHPELKLDRMRQSQ*QSVTQS
Trigger: GCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCAT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACATGTGTGAAATCATTTaGTTGACACAAGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHMCEII*LTQGAG
Trigger: TCCAGCACCTTGTGTCAACAAAATGATTTCACACAT...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CAA 90 bp ATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAACACATCTTGAAGAGTTTTTaGTCTTACAGCAAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: IWAKTIGKSGEANSHCQHILKSF*SYSKEH
Trigger: GTGCTCCTTGCTGTAAGACAAAAAACTCTTCAAGAT...GTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR CAA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTGGCAAAGCCTTTATTaGGGCCAAGACGATAGGGAA +
Preference number: 5 (lower is better)
Translates to: SDEAKPIAISHPELKLDRWQSLY*GQDDRE
Trigger: TTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAATGTTCAGTATTTGACTaGATTGAGCAGACACGGCTC +
Preference number: 5 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQCSVFD*IEQTRL
Trigger: GAGCCGTGTCTGCTCAATCAAGTCAAATACTGAACA...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300227.12
ENST00000383096.7
CDS-3UTR CAA 90 bp ACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCATGGTTCTTCAGATCTaGAAGTTCCTGATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: TEWQSLYLGQDDREIWGSMVLQI*KFLILL
Trigger: AAGCAGAATCAGGAACTTCAAGATCTGAAGAACCAT...GCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CAA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAATGGTTCTTCAGATCTaGAAGTTCCTGATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSMVLQI*KFLILL
Trigger: AAGCAGAATCAGGAACTTCAAGATCTGAAGAACCAT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CAA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGTCATCTGTCTTGTGTTaGGTTAGGTGGAAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWSSVLC*VRWKRV
Trigger: TACTCTTTTCCACCTAACCAAACACAAGACAGATGA...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CAA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAATCTTGAAGAGTTTTTaGTCTTACAGCAAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSILKSF*SYSKEH
Trigger: GTGCTCCTTGCTGTAAGACAAAAAACTCTTCAAGAT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR CAA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGATCTTGAAGAGTTTTTaGTCTTACAGCAAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWILKSF*SYSKEH
Trigger: GTGCTCCTTGCTGTAAGACAAAAAACTCTTCAAGAT...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTAAGAGGACCACCAGTTaGAAGTGCTCCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: VHGSVKWQTGECPITLLSKRTTS*KCSCHS
Trigger: ACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCTT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTAAGAGGACCACCAGTTaGAAGTGCTCCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: WQTGECPITLLSELCDFSKRTTS*KCSCHS
Trigger: ACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCTT...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGTGTGTTGCATTAAATTaGAAGATTCCTCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWCVALN*KIPPAQ
Trigger: CTGTGCAGGAGGAATCTTCAAATTTAATGCAACACA...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GGCAAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGAGATACATTGGTTGTTaGCTTAACCATCGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: GKACWEVSEFFVHGSVKWRYIGC*LNHRFR
Trigger: GCGAAAACGATGGTTAAGCAAACAACCAATGTATCT...CCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp ACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCAGCATCCAAGATACATaGGTTGTTTGCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: TEWQSLYLGQDDREIWGSSIQDT*VVCLTI
Trigger: GATGGTTAAGCAAACAACCAATGTATCTTGGATGCT...GCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp CTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCACTGTCAAGCATCCAAGATACATaGGTTGTTTGCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: LYLGQDDREIWGSEQSLSSIQDT*VVCLTI
Trigger: GATGGTTAAGCAAACAACCAATGTATCTTGGATGCT...TGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCAAAGTCACCTGTTTCATaGTTATGGATTTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSKSPVS*LWICCE
Trigger: CTCACAGCAAATCCATAACAATGAAACAGGTGACTT...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGATGAGGCAAAGCCAATaGCAATCAGTCACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: GSVKWQTGECPITLLSELMRQSQ*QSVTQS
Trigger: GCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCAT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS TCA 90 bp CCTGTATTTTGGACTCCACATCTTGGATGTGTGAAATCATTTTGTTaGCACAAGGTGCTGGAATATTTACTACGGCACAGCTGTGACGTC +
Preference number: 5 (lower is better)
Translates to: PVFWTPHLGCVKSFC*HKVLEYLLRHSCDV
Trigger: GACGTCACAGCTGTGCCGTAGTAAATATTCCAGCACCTTGTGTCAACAAAATGATTTCACACATCCAAGATGTGGAGTCCAAAATACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000399177.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000579947.5
ENST00000583930.5
CDS CCA 90 bp ACAAGGTGCTGGAATATTTACTACGGCACAGCTGTGACGTCGACATaGGTAGCTAAAGTAAATGCCTTTATTCACCCCTTCAGTATTTGT +
Preference number: 5 (lower is better)
Translates to: TRCWNIYYGTAVTST*VAKVNAFIHPFSIC
Trigger: ACAAATACTGAAGGGGTGAATAAAGGCATTTACTTTAGCTACCCATGTCGACGTCACAGCTGTGCCGTAGTAAATATTCCAGCACCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000399177.7
ENST00000403303.5
ENST00000406524.6
ENST00000577766.5
ENST00000579916.5
ENST00000579947.5
ENST00000583930.5
CDS-3UTR CAA 90 bp CAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAGCGAACAGTCATGTGAAATCATTTTGTaGACACAAGGTGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: QSLYLGQDDREIWGSEQSCEIIL*TQGAGI
Trigger: TATTCCAGCACCTTGTGTCAACAAAATGATTTCACA...TGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CAA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAAAATGCTCCTGTATTTaGGACTCCACATCTTGGATG +
Preference number: 5 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQKCSCI*DSTSWM
Trigger: CATCCAAGATGTGGAGTCCAAAATACAGGAGCATTT...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTAAATGCTCCTGTATTTaGGACTCCACATCTTGGATG +
Preference number: 5 (lower is better)
Translates to: SDEAKPIAISHPELKLDRKCSCI*DSTSWM
Trigger: CATCCAAGATGTGGAGTCCAAAATACAGGAGCATTT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CAA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTAAGAGGACCACCAGTTaGAAGTGCTCCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: TGECPITLLSELCDFSCLKRTTS*KCSCHS
Trigger: ACTGTGGCAGGAGCACTTCAAACTGGTGGTCCTCTT...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAATGTGTTGCATTAAATTaGAAGATTCCTCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGECVALN*KIPPAQ
Trigger: CTGTGCAGGAGGAATCTTCAAATTTAATGCAACACA...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAAGATACATTGGTTGTTaGCTTAACCATCGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGERYIGC*LNHRFR
Trigger: GCGAAAACGATGGTTAAGCAAACAACCAATGTATCT...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAAAGTCACCTGTTTCATaGTTATGGATTTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGEKSPVS*LWICCE
Trigger: CTCACAGCAAATCCATAACAATGAAACAGGTGACTT...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTATGAGGCAAAGCCAATaGCAATCAGTCACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: SVKWQTGECPITLLSELCMRQSQ*QSVTQS
Trigger: GCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCAT...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTATGAGGCAAAGCCAATaGCAATCAGTCACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: VHGSVKWQTGECPITLLSMRQSQ*QSVTQS
Trigger: GCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCAT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGATGAGGCAAAGCCAATaGCAATCAGTCACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: FFVHGSVKWQTGECPITLMRQSQ*QSVTQS
Trigger: GCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCAT...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp ACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGCAAAGCCTTTATTaGGGCCAAGACGATAGGGAA +
Preference number: 5 (lower is better)
Translates to: TLSTEWQSLYLGQDDREIWQSLY*GQDDRE
Trigger: TTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCA...GATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAAAAATCTGATCCTGGGTaGTTATTTTGCAGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGEKSDPG*LFCRAS
Trigger: ACTTGCTCTGCAAAATAACAACCCAGGATCAGATTT...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581852.5
CDS TCA 90 bp GAGACATGGCATTGCCTTCATTTGTCCTTGACCATGCCTTCTCTCTaGGAGCCTTTACTTCCTGACATGTTAAACCTATATTGGTTTGAT +
Preference number: 5 (lower is better)
Translates to: ETWHCLHLSLTMPSL*EPLLPDMLNLYWFD
Trigger: ATCAAACCAATATAGGTTTAACATGTCAGGAAGTAAAGGCTCTCAGAGAGAAGGCATGGTCAAGGACAAATGAAGGCAATGCCATGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000399177.7
ENST00000403303.5
ENST00000406524.6
ENST00000577766.5
ENST00000579916.5
ENST00000579947.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTGGGGAATGTGAAATCATTTTGTaGACACAAGGTGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: VLNGKAFIWAKTIGKSGECEIIL*TQGAGI
Trigger: TATTCCAGCACCTTGTGTCAACAAAATGATTTCACA...TTCCCCAGATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CAA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTATGTGTGAAATCATTTaGTTGACACAAGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: SDEAKPIAISHPELKLDRMCEII*LTQGAG
Trigger: TCCAGCACCTTGTGTCAACAAAATGATTTCACACAT...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CAA 90 bp ACACAAACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGCTCTTTTCTCCTGGTTaGACCTCTTTCACTGGTGTA +
Preference number: 5 (lower is better)
Translates to: TQTLSTEWQSLYLGQDDRLFSPG*TSFTGV
Trigger: TACACCAGTGAAAGAGGTCAAACCAGGAGAAAAGAG...CCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383096.7
ENST00000403303.5
CDS-3UTR CAA 90 bp TCAGATGAGGCAAAGCCAATTGCAATCAGTCACCCAGAGCTGAAATTAGATCGTTGTGTTGCATTAAATTaGAAGATTCCTCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: SDEAKPIAISHPELKLDRCVALN*KIPPAQ
Trigger: CTGTGCAGGAGGAATCTTCAAATTTAATGCAACACA...ACGATCTAATTTCAGCTCTGGGTGACTGATTGCAATTGGCTTTGCCTCATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp AAAGCATGCTGGGAGGTGAGTGAGTTTTTCGTTCATGGAAGTGTGAAATGGCAAAGATACATTGGTTGTTaGCTTAACCATCGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: KACWEVSEFFVHGSVKWQRYIGC*LNHRFR
Trigger: GCGAAAACGATGGTTAAGCAAACAACCAATGTATCT...TTGCCATTTCACACTTCCATGAACGAAAAACTCACTCACCTCCCAGCATGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGAAATGCTCCTGTATTTaGGACTCCACATCTTGGATG +
Preference number: 5 (lower is better)
Translates to: GSVKWQTGECPITLLSELKCSCI*DSTSWM
Trigger: CATCCAAGATGTGGAGTCCAAAATACAGGAGCATTT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTCTCTTTTCTCCTGGTTaGACCTCTTTCACTGGTGTA +
Preference number: 5 (lower is better)
Translates to: VHGSVKWQTGECPITLLSLFSPG*TSFTGV
Trigger: TACACCAGTGAAAGAGGTCAAACCAGGAGAAAAGAG...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CAA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTGGCAAAGCCTTTATTaGGGCCAAGACGATAGGGAA +
Preference number: 5 (lower is better)
Translates to: KWQTGECPITLLSELCDFWQSLY*GQDDRE
Trigger: TTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCA...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGCTGCAGCTGACAGAGTaGGGTATCTTGAAGAGTTTT +
Preference number: 5 (lower is better)
Translates to: FFVHGSVKWQTGECPITLLQLTE*GILKSF
Trigger: AAAACTCTTCAAGATACCCAACTCTGTCAGCTGCAG...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581524.5
CDS GCA 90 bp CATCCAAGATACATTGGTTGTTTGCTTAACCATCGTTTTCGCATGTaGCATCTGTCAAAGTCTGGAAGAAACCTAAGATGTGTTGCATTA +
Preference number: 5 (lower is better)
Translates to: HPRYIGCLLNHRFRM*HLSKSGRNLRCVAL
Trigger: TAATGCAACACATCTTAGGTTTCTTCCAGACTTTGACAGATGGCACATGCGAAAACGATGGTTAAGCAAACAACCAATGTATCTTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTCTCTTTTCTCCTGGTTaGACCTCTTTCACTGGTGTA +
Preference number: 5 (lower is better)
Translates to: KWQTGECPITLLSELCDFLFSPG*TSFTGV
Trigger: TACACCAGTGAAAGAGGTCAAACCAGGAGAAAAGAG...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CAA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTCTCTTTTCTCCTGGTTaGACCTCTTTCACTGGTGTA +
Preference number: 5 (lower is better)
Translates to: TGECPITLLSELCDFSCLLFSPG*TSFTGV
Trigger: TACACCAGTGAAAGAGGTCAAACCAGGAGAAAAGAG...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CAA 90 bp ACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCTCATCTGTCTTGTGTTaGGTTAGGTGGAAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: TLSTEWQSLYLGQDDREISSVLC*VRWKRV
Trigger: TACTCTTTTCCACCTAACCAAACACAAGACAGATGA...GATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
CDS-3UTR CAA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGATCTTGAAGAGTTTTTaGTCTTACAGCAAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: GSVKWQTGECPITLLSELILKSF*SYSKEH
Trigger: GTGCTCCTTGCTGTAAGACAAAAAACTCTTCAAGAT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGTTGCATTAAATTaGAAGATTCCTCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: GSVKWQTGECPITLLSELCVALN*KIPPAQ
Trigger: CTGTGCAGGAGGAATCTTCAAATTTAATGCAACACA...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp ACACAAACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGTGTGTTGCATTAAATTaGAAGATTCCTCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: TQTLSTEWQSLYLGQDDRCVALN*KIPPAQ
Trigger: CTGTGCAGGAGGAATCTTCAAATTTAATGCAACACA...CCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp ACACAAACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGAGATACATTGGTTGTTaGCTTAACCATCGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: TQTLSTEWQSLYLGQDDRRYIGC*LNHRFR
Trigger: GCGAAAACGATGGTTAAGCAAACAACCAATGTATCT...CCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGTTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGAGCATCCAAGATACATaGGTTGTTTGCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: GSVKWQTGECPITLLSELSIQDT*VVCLTI
Trigger: GATGGTTAAGCAAACAACCAATGTATCTTGGATGCT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp ACTTTAAGTACTGAATGGCAAAGCCTTTATTTGGGCCAAGACGATAGGGAAATCAAGTCACCTGTTTCATaGTTATGGATTTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: TLSTEWQSLYLGQDDREIKSPVS*LWICCE
Trigger: CTCACAGCAAATCCATAACAATGAAACAGGTGACTT...GATTTCCCTATCGTCTTGGCCCAAATAAAGGCTTTGCCATTCAGTACTTAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383096.7
ENST00000403303.5
ENST00000581524.5
ENST00000581852.5
CDS-3UTR CAA 90 bp GGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGAAGTCACCTGTTTCATaGTTATGGATTTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: GSVKWQTGECPITLLSELKSPVS*LWICCE
Trigger: CTCACAGCAAATCCATAACAATGAAACAGGTGACTT...CAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTATGTGTGAAATCATTTaGTTGACACAAGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: WQTGECPITLLSELCDFSMCEII*LTQGAG
Trigger: TCCAGCACCTTGTGTCAACAAAATGATTTCACACAT...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTATGTGTGAAATCATTTaGTTGACACAAGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: VHGSVKWQTGECPITLLSMCEII*LTQGAG
Trigger: TCCAGCACCTTGTGTCAACAAAATGATTTCACACAT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CAA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTAAATGCTCCTGTATTTaGGACTCCACATCTTGGATG +
Preference number: 5 (lower is better)
Translates to: KWQTGECPITLLSELCDFKCSCI*DSTSWM
Trigger: CATCCAAGATGTGGAGTCCAAAATACAGGAGCATTT...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTATGGTTCTTCAGATCTaGAAGTTCCTGATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: WQTGECPITLLSELCDFSMVLQI*KFLILL
Trigger: AAGCAGAATCAGGAACTTCAAGATCTGAAGAACCAT...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CAA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTTCATCTGTCTTGTGTTaGGTTAGGTGGAAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: VHGSVKWQTGECPITLLSSSVLC*VRWKRV
Trigger: TACTCTTTTCCACCTAACCAAACACAAGACAGATGA...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTCATCTGTCTTGTGTTaGGTTAGGTGGAAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: FFVHGSVKWQTGECPITLSSVLC*VRWKRV
Trigger: TACTCTTTTCCACCTAACCAAACACAAGACAGATGA...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTATCTTGAAGAGTTTTTaGTCTTACAGCAAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: VHGSVKWQTGECPITLLSILKSF*SYSKEH
Trigger: GTGCTCCTTGCTGTAAGACAAAAAACTCTTCAAGAT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTTGTGTTGCATTAAATTaGAAGATTCCTCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: VHGSVKWQTGECPITLLSCVALN*KIPPAQ
Trigger: CTGTGCAGGAGGAATCTTCAAATTTAATGCAACACA...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTTGTGTTGCATTAAATTaGAAGATTCCTCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: SVKWQTGECPITLLSELCCVALN*KIPPAQ
Trigger: CTGTGCAGGAGGAATCTTCAAATTTAATGCAACACA...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGAGATACATTGGTTGTTaGCTTAACCATCGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: FFVHGSVKWQTGECPITLRYIGC*LNHRFR
Trigger: GCGAAAACGATGGTTAAGCAAACAACCAATGTATCT...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTAGATACATTGGTTGTTaGCTTAACCATCGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: SVKWQTGECPITLLSELCRYIGC*LNHRFR
Trigger: GCGAAAACGATGGTTAAGCAAACAACCAATGTATCT...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTAGATACATTGGTTGTTaGCTTAACCATCGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: VHGSVKWQTGECPITLLSRYIGC*LNHRFR
Trigger: GCGAAAACGATGGTTAAGCAAACAACCAATGTATCT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGAGCATCCAAGATACATaGGTTGTTTGCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: FFVHGSVKWQTGECPITLSIQDT*VVCLTI
Trigger: GATGGTTAAGCAAACAACCAATGTATCTTGGATGCT...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp AGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTAGCATCCAAGATACATaGGTTGTTTGCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: SVKWQTGECPITLLSELCSIQDT*VVCLTI
Trigger: GATGGTTAAGCAAACAACCAATGTATCTTGGATGCT...ACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTAGCATCCAAGATACATaGGTTGTTTGCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: WQTGECPITLLSELCDFSSIQDT*VVCLTI
Trigger: GATGGTTAAGCAAACAACCAATGTATCTTGGATGCT...AGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp TTTTTCGTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGAAGTCACCTGTTTCATaGTTATGGATTTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: FFVHGSVKWQTGECPITLKSPVS*LWICCE
Trigger: CTCACAGCAAATCCATAACAATGAAACAGGTGACTT...CAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAACGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp GTTCATGGAAGTGTGAAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTAAGTCACCTGTTTCATaGTTATGGATTTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: VHGSVKWQTGECPITLLSKSPVS*LWICCE
Trigger: CTCACAGCAAATCCATAACAATGAAACAGGTGACTT...AGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTTCACACTTCCATGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS CCA 90 bp TTCTCACTTCTGCTATTTTATCTTCCATTTCATCTGTCTTGTGTTTaGTTAGGTGGAAAAGAGTACCAATGCGATAAGCCTCCTTATAGA +
Preference number: 5 (lower is better)
Translates to: FSLLLFYLPFHLSCV*LGGKEYQCDKPPYR
Trigger: TCTATAAGGAGGCTTATCGCATTGGTACTCTTTTCCACCTAACCAAACACAAGACAGATGAAATGGAAGATAAAATAGCAGAAGTGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579947.5
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CAA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTATGTGTGAAATCATTTaGTTGACACAAGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: TGECPITLLSELCDFSCLMCEII*LTQGAG
Trigger: TCCAGCACCTTGTGTCAACAAAATGATTTCACACAT...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS-3UTR CAA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTATGGTTCTTCAGATCTaGAAGTTCCTGATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: KWQTGECPITLLSELCDFMVLQI*KFLILL
Trigger: AAGCAGAATCAGGAACTTCAAGATCTGAAGAACCAT...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CAA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTATGGTTCTTCAGATCTaGAAGTTCCTGATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: TGECPITLLSELCDFSCLMVLQI*KFLILL
Trigger: AAGCAGAATCAGGAACTTCAAGATCTGAAGAACCAT...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000583930.5
CDS-3UTR CAA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTATCTTGAAGAGTTTTTaGTCTTACAGCAAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: TGECPITLLSELCDFSCLILKSF*SYSKEH
Trigger: GTGCTCCTTGCTGTAAGACAAAAAACTCTTCAAGAT...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000581524.5
ENST00000583930.5
CDS-3UTR CAA 90 bp ACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTCTTGTCTTTGTGTTGCATTAAATTaGAAGATTCCTCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: TGECPITLLSELCDFSCLCVALN*KIPPAQ
Trigger: CTGTGCAGGAGGAATCTTCAAATTTAATGCAACACA...AAGACAAGAAAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTAGATACATTGGTTGTTaGCTTAACCATCGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: KWQTGECPITLLSELCDFRYIGC*LNHRFR
Trigger: GCGAAAACGATGGTTAAGCAAACAACCAATGTATCT...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTAGCATCCAAGATACATaGGTTGTTTGCTTAACCATC +
Preference number: 5 (lower is better)
Translates to: KWQTGECPITLLSELCDFSIQDT*VVCLTI
Trigger: GATGGTTAAGCAAACAACCAATGTATCTTGGATGCT...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS-3UTR CAA 90 bp AAATGGCAAACAGGTGAATGTCCAATTACACTGTTATCTGAACTGTGTGACTTTTGTGAAATCATTTTGTaGACACAAGGTGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: KWQTGECPITLLSELCDFCEIIL*TQGAGI
Trigger: TATTCCAGCACCTTGTGTCAACAAAATGATTTCACA...AAAGTCACACAGTTCAGATAACAGTGTAATTGGACATTCACCTGTTTGCCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000583930.5
CDS TCA 72 bp CAGCCTCTCCGCCAGGAAGTTGTTCAGTATTTGACTTaGTTGAGCAGACACGGCTCCGCGCGTTTCCCCGCG +
Preference number: 6 (lower is better)
Translates to: QPLRQEVVQYLT*LSRHGSARFPA
Trigger: CGCGGGGAAACGCGCGGAGCCGTGTCTGCTCAATCAAGTCAAATACTGAACAACTTCCTGGCGGAGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000579947.5
CDS TCA 72 bp GTCAACGCCCCTTCGTACAGCAGTGAGGTTAGAACGTaGGGGGATCACAGACTTCGTCCACCTTCGGGAGGA +
Preference number: 6 (lower is better)
Translates to: VNAPSYSSEVRT*GDHRLRPPSGG
Trigger: TCCTCCCGAAGGTGGACGAAGTCTGTGATCCCCTCACGTTCTAACCTCACTGCTGTACGAAGGGGCGTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577766.5
CDS CAA 72 bp TCAGCCTCTCCGCCAGGAAGTTGTTCAGTATTTGACTaGATTGAGCAGACACGGCTCCGCGCGTTTCCCCGC +
Preference number: 6 (lower is better)
Translates to: SASPPGSCSVFD*IEQTRLRAFPR
Trigger: GCGGGGAAACGCGCGGAGCCGTGTCTGCTCAATCAAGTCAAATACTGAACAACTTCCTGGCGGAGAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000579947.5
CDS TCA 72 bp CAGCCTCTCCGCCAGGAAGTTGTTCAGTATTTGACTTaGTTGAGCAGACACGGAGAGGGAAGGAGTGGAGAC +
Preference number: 6 (lower is better)
Translates to: QPLRQEVVQYLT*LSRHGEGRSGD
Trigger: GTCTCCACTCCTTCCCTCTCCGTGTCTGCTCAATCAAGTCAAATACTGAACAACTTCCTGGCGGAGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577766.5
CDS TCA 72 bp CAGCCTCTCCGCCAGGAAGTTGTTCAGTATTTGACTTaGTTGAGCAGACACGCCTCTGGAAGGGGTGAAGAA +
Preference number: 6 (lower is better)
Translates to: QPLRQEVVQYLT*LSRHASGRGEE
Trigger: TTCTTCACCCCTTCCAGAGGCGTGTCTGCTCAATCAAGTCAAATACTGAACAACTTCCTGGCGGAGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583550.1
CDS CAA 72 bp TCAGCCTCTCCGCCAGGAAGTTGTTCAGTATTTGACTaGATTGAGCAGACACGGAGAGGGAAGGAGTGGAGA +
Preference number: 6 (lower is better)
Translates to: SASPPGSCSVFD*IEQTRRGKEWR
Trigger: TCTCCACTCCTTCCCTCTCCGTGTCTGCTCAATCAAGTCAAATACTGAACAACTTCCTGGCGGAGAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577766.5
CDS CAA 72 bp TCCTCATGGGCCCCATTACTGGCTGGCTATCTGACCTaGGGAAGGGTAGTTAATGTATTTGAGCTTCAGCCT +
Preference number: 6 (lower is better)
Translates to: SSWAPLLAGYLT*GRVVNVFELQP
Trigger: AGGCTGAAGCTCAAATACATTAACTACCCTTCCCAAGGTCAGATAGCCAGCCAGTAATGGGGCCCATGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583550.1
CDS CCA 72 bp CTTTTCAATCAGTTAGATGTAGAATTCAGTTCCTCATaGGCCCCATTACTGGCTGGCTATCTGACCTTGGGA +
Preference number: 6 (lower is better)
Translates to: LFNQLDVEFSSS*APLLAGYLTLG
Trigger: TCCCAAGGTCAGATAGCCAGCCAGTAATGGGGCCCATGAGGAACTGAATTCTACATCTAACTGATTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583550.1
CDS CCA 72 bp TGGAATATTTACTACGGCACAGCTGTGACGTCGACATaGGTAGCTAAAGTAAATGCCTTTATTCACCCCTTC +
Preference number: 6 (lower is better)
Translates to: WNIYYGTAVTST*VAKVNAFIHPF
Trigger: GAAGGGGTGAATAAAGGCATTTACTTTAGCTACCCATGTCGACGTCACAGCTGTGCCGTAGTAAATATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000399177.7
ENST00000403303.5
ENST00000406524.6
ENST00000577766.5
ENST00000579916.5
ENST00000579947.5
ENST00000583930.5
CDS TCA 72 bp TGGACTCCACATCTTGGATGTGTGAAATCATTTTGTTaGCACAAGGTGCTGGAATATTTACTACGGCACAGC +
Preference number: 6 (lower is better)
Translates to: WTPHLGCVKSFC*HKVLEYLLRHS
Trigger: GCTGTGCCGTAGTAAATATTCCAGCACCTTGTGTCAACAAAATGATTTCACACATCCAAGATGTGGAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000399177.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000579947.5
ENST00000583930.5
CDS CAA 72 bp CTGCAGCTGACAGAGTTGGGTATCTTGAAGAGTTTTTaGTCTTACAGCAAGGAGCACTCTAAATCTCTGATC +
Preference number: 6 (lower is better)
Translates to: LQLTELGILKSF*SYSKEHSKSLI
Trigger: GATCAGAGATTTAGAGTGCTCCTTGCTGTAAGACAAAAAACTCTTCAAGATACCCAACTCTGTCAGCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581524.5
CDS CAA 90 bp CATCCTTCTCTGCAGCTGACAGAGTTGGGTATCTTGAAGAGTTTTTaGTCTTACAGCAAGGAGCACTCTAAATCTCTGATCTTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: HPSLQLTELGILKSF*SYSKEHSKSLIFLK
Trigger: TTTGAGGAAGATCAGAGATTTAGAGTGCTCCTTGCTGTAAGACAAAAAACTCTTCAAGATACCCAACTCTGTCAGCTGCAGAGAAGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581524.5
CDS TCA 72 bp CATTGCCTTCATTTGTCCTTGACCATGCCTTCTCTCTaGGAGCCTTTACTTCCTGACATGTTAAACCTATAT +
Preference number: 6 (lower is better)
Translates to: HCLHLSLTMPSL*EPLLPDMLNLY
Trigger: ATATAGGTTTAACATGTCAGGAAGTAAAGGCTCTCAGAGAGAAGGCATGGTCAAGGACAAATGAAGGCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000399177.7
ENST00000403303.5
ENST00000406524.6
ENST00000577766.5
ENST00000579916.5
ENST00000579947.5
ENST00000583930.5
CDS CAA 72 bp TTGGACTCCACATCTTGGATGTGTGAAATCATTTTGTaGACACAAGGTGCTGGAATATTTACTACGGCACAG +
Preference number: 6 (lower is better)
Translates to: LDSTSWMCEIIL*TQGAGIFTTAQ
Trigger: CTGTGCCGTAGTAAATATTCCAGCACCTTGTGTCAACAAAATGATTTCACACATCCAAGATGTGGAGTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000399177.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000579947.5
ENST00000583930.5
CDS TCA 72 bp ATGCTCCTGTATTTTGGACTCCACATCTTGGATGTGTaGAATCATTTTGTTGACACAAGGTGCTGGAATATT +
Preference number: 6 (lower is better)
Translates to: MLLYFGLHILDV*NHFVDTRCWNI
Trigger: AATATTCCAGCACCTTGTGTCAACAAAATGATTTCACACATCCAAGATGTGGAGTCCAAAATACAGGAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000399177.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000579947.5
ENST00000583930.5
CDS CAA 72 bp ATTTTGGACTCCACATCTTGGATGTGTGAAATCATTTaGTTGACACAAGGTGCTGGAATATTTACTACGGCA +
Preference number: 6 (lower is better)
Translates to: ILDSTSWMCEII*LTQGAGIFTTA
Trigger: TGCCGTAGTAAATATTCCAGCACCTTGTGTCAACAAAATGATTTCACACATCCAAGATGTGGAGTCCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000399177.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000579947.5
ENST00000583930.5
CDS CAA 72 bp TGTCTTTTATTTCAGCATCCAAGATACATTGGTTGTTaGCTTAACCATCGTTTTCGCATGTGCCATCTGTCA +
Preference number: 6 (lower is better)
Translates to: CLLFQHPRYIGC*LNHRFRMCHLS
Trigger: TGACAGATGGCACATGCGAAAACGATGGTTAAGCAAACAACCAATGTATCTTGGATGCTGAAATAAAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300227.12
ENST00000383096.7
ENST00000403303.5
ENST00000406524.6
ENST00000579916.5
ENST00000581524.5
ENST00000581852.5
ENST00000583930.5
CDS CAA 72 bp TTAAAAATTGCTGAGCGTTTACTAACAGAATGTTCTTaGTCGAGACTTCTGATTCTTTCAGCTTCATCTTCT +
Preference number: 6 (lower is better)
Translates to: LKIAERLLTECS*SRLLILSASSS
Trigger: AGAAGATGAAGCTGAAAGAATCAGAAGTCTCGACAAAGAACATTCTGTTAGTAAACGCTCAGCAATTTTTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300227.12