Pregenerated sensors for CCDC173 (Homo sapiens)
Ensembl gene IDs: ENSG00000154479Ensembl transcript IDs: ENST00000419478.1, ENST00000421028.1, ENST00000447353.6
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GGGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTaGAACTACACAATGGTCATGGCTACACAATATTTT | + |
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Preference number: 3 (lower is better) Translates to: GYGVSSKSTEKF*NYTMVMATQYF Trigger: AAAATATTGTGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR TCA 90 bp | GTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACTAGATCTGGAAAAGTaGCTGTGGCGCCAAGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: VSSKSTEKFWNYTMVMATLDLEK*LWRQAP Trigger: CGGCGCTTGGCGCCACAGTCACTTTTCCAGATCTAG...TGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | ATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAGGGGAATTTCCACTCATCGTGTaGAATTATGGTGACCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IPSIGKADKVTRSCGEGEFPLIV*NYGDLL Trigger: CAGCAGGTCACCATAATTCCACACGATGAGTGGAAA...TTCCCCTTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | AGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACAATATTTTGGCGGACGCCAGCCGGTaGAGTTGTTACTCGTACCAC | + |
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Preference number: 4 (lower is better) Translates to: RALKNSGTTQWSWLHNILADASR*SCYSYH Trigger: GTGGTACGAGTAACAACTCCACCGGCTGGCGTCCGC...CAAAATATTGTGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | GTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACATCTGTCCACAAACACTaGTCCACGGCCACCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VSSKSTEKFWNYTMVMATSVHKH*STATSR Trigger: CCTGGAGGTGGCCGTGGACCAGTGTTTGTGGACAGA...TGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | GTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACAAGTTACCAGGAGCTGTaGGGAAGGGGAATGGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VSSKSTEKFWNYTMVMATSYQEL*GRGMGS Trigger: ACTCCCCATTCCCCTTCCCCACAGCTCCTGGTAACT...TGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR TCA 90 bp | AGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACAATATTTTGCCGTACCAGCATCTCTaGCGAGGTGTCCATGATGCT | + |
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Preference number: 4 (lower is better) Translates to: RALKNSGTTQWSWLHNILPYQHL*RGVHDA Trigger: AGCATCATGGACACCTCGTCAGAGATGCTGGTACGG...CAAAATATTGTGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR TCA 90 bp | TTCAAAATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAAAGGGGAATGGGGAGTaGCTGCTTAATGAATGGGTA | + |
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Preference number: 4 (lower is better) Translates to: FKIPSIGKADKVTRSCGEKGNGE*LLNEWV Trigger: TACCCATTCATTAAGCAGTCACTCCCCATTCCCCTT...TTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTATTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR GCA 90 bp | TATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGTGCACGGAGGCATGCTaGTTCTCTTGTCAACCTGTC | + |
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Preference number: 4 (lower is better) Translates to: YGVSSKSTEKFWNYTMVMCTEAC*FSCQPV Trigger: GACAGGTTGACAAGAGAAGCAGCATGCCTCCGTGCA...CATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR GCA 90 bp | GGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATTCTGCACGGAGGCATaGTGCTTCTCTTGTCAACCT | + |
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Preference number: 4 (lower is better) Translates to: GMGFLVRALKNSGTTQWSFCTEA*CFSCQP Trigger: AGGTTGACAAGAGAAGCAGCATGCCTCCGTGCAGAA...TGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR TCA 90 bp | GGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCACGTGTGGAATTATGGTaGCCTGCTGGAGATCTACTT | + |
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Preference number: 4 (lower is better) Translates to: GMGFLVRALKNSGTTQWSRVELW*PAGDLL Trigger: AAGTAGATCTCCAGCAGGTCACCATAATTCCACACG...TGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR TCA 90 bp | ATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAGGGGAATGTTTTACCACTTCTTaGGATCGCAAATGCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: IPSIGKADKVTRSCGEGECFTTS*DRKCIS Trigger: AGAAATGCATTTGCGATCTCAAGAAGTGGTAAAACA...TTCCCCTTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR TCA 90 bp | TTCAAAATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAATGTTCCCAGAAAATCTaGTCTGCTTTCATGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: FKIPSIGKADKVTRSCGECSQKI*SAFMTA Trigger: GGCTGTCATGAAAGCAGATCAGATTTTCTGGGAACA...TTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTATTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | ATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAGGGGAATCTGGAACTACACAATaGTCATGGCTACACAATATT | + |
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Preference number: 4 (lower is better) Translates to: IPSIGKADKVTRSCGEGESGTTQ*SWLHNI Trigger: AATATTGTGTAGCCATGACCATTGTGTAGTTCCAGA...TTCCCCTTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR GCA 90 bp | AGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACAATATTTTGCTTTGCCTTTCTTTCTaGACGGAGGCATGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RALKNSGTTQWSWLHNILLCLSF*TEACCF Trigger: GAAGCAGCATGCCTCCGTGCAGAAAGAAAGGCAAAG...CAAAATATTGTGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | GGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCACATTTGCCTGATAGCTaGGTCTTAATCCACCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GMGFLVRALKNSGTTQWSHLPDS*VLIHLC Trigger: ACAGAGGTGGATTAAGACCCAGCTATCAGGCAAATG...TGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR TCA 90 bp | GTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACTGTCAAGGCTATCTTaGATCCTTTTCCACTCATCG | + |
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Preference number: 4 (lower is better) Translates to: VSSKSTEKFWNYTMVMATLSRLS*ILFHSS Trigger: CGATGAGTGGAAAAGGATTCAAGATAGCCTTGACAG...TGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR TCA 90 bp | TTCAAAATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAAAGCTTTTTCAATGTTaGGTTTCAACTGTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: FKIPSIGKADKVTRSCGEKLFQC*VSTVPP Trigger: GGGAGGAACAGTTGAAACTCAACATTGAAAAAGCTT...TTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTATTTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR GCA 90 bp | TATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGCAAGAAACCGTCTCCTaGTTTCATGCATCTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: YGVSSKSTEKFWNYTMVMQETVS*FHASLL Trigger: GAGAAGAGATGCATGAAAGCAGGAGACGGTTTCTTG...CATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR GCA 90 bp | GTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACATCTTCTTCCTCTTGCTaGTGCTGTTCTACAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VSSKSTEKFWNYTMVMATSSSSC*CCSTAL Trigger: CAAAGCTGTAGAACAGCAGCAGCAAGAGGAAGAAGA...TGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | GGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCAATTATGGTGACCTGCTaGAGATCTACTTTGCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GMGFLVRALKNSGTTQWSIMVTC*RSTLLG Trigger: ACCTAGCAAAGTAGATCTCCAGCAGGTCACCATAAT...TGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR TCA 90 bp | AATGGGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGTCTGATCTGCTTTCATaGCAGCCAGCAATTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: NGYGVSSKSTEKFWNYTMSDLLS*QPAIVL Trigger: AAGAACAATTGCTGGCTGTCATGAAAGCAGATCAGA...CATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR GCA 90 bp | TATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGGAATTATGGTGACCTaGTGGAGATCTACTTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: YGVSSKSTEKFWNYTMVMGIMVT*WRSTLL Trigger: TAGCAAAGTAGATCTCCAGCAGGTCACCATAATTCC...CATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR GCA 90 bp | GTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACATCTTCCTCTTGCTGCTaGTGTTCTACAGCTTTGATA | + |
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Preference number: 4 (lower is better) Translates to: VSSKSTEKFWNYTMVMATSSSCC*CSTALI Trigger: TATCAAAGCTGTAGAACAGCAGCAGCAAGAGGAAGA...TGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR GCA 90 bp | AGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACAATATTTTGTCATCTTCTTCCTCTTaGTGCTGCTGTTCTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: RALKNSGTTQWSWLHNILSSSSS*CCCSTA Trigger: AGCTGTAGAACAGCAGCAGCAAGAGGAAGAAGATGA...CAAAATATTGTGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR GCA 90 bp | AATGGGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGCCAGAAAATCTGATCTaGTTTCATGACAGCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: NGYGVSSKSTEKFWNYTMPENLI*FHDSQQ Trigger: TTGCTGGCTGTCATGAAAGCAGATCAGATTTTCTGG...CATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR TCA 90 bp | AATGGGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGAGAAGAAGTCCCGAATaGAAGTTTTTCACTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: NGYGVSSKSTEKFWNYTMRRSPE*KFFTLS Trigger: AGAAAGAGTGAAAAACTTTCATTCGGGACTTCTTCT...CATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR GCA 90 bp | AGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACAATATTTTGCGTCTCCTGCTTTCATaGATCTCTTCTCTTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: RALKNSGTTQWSWLHNILRLLLS*ISSLFF Trigger: AAAGAAAAGAGAAGAGATGCATGAAAGCAGGAGACG...CAAAATATTGTGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | TATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGCATCACGCTTCTTTTTaGCTTCAAGTTTCTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: YGVSSKSTEKFWNYTMVMHHASF*LQVSVL Trigger: AAGAACAGAAACTTGAAGCCAAAAAGAAGCGTGATG...CATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | TATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGTTTCGGAATTCAATCTaGGCATCACGTTCTTTCATA | + |
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Preference number: 4 (lower is better) Translates to: YGVSSKSTEKFWNYTMVMFRNSI*ASRSFI Trigger: TATGAAAGAACGTGATGCCCAGATTGAATTCCGAAA...CATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | AATGGGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTTCAATTACCTCTCTaGCATAGTCCTGAAATTCTT | + |
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Preference number: 4 (lower is better) Translates to: NGYGVSSKSTEKFWNYTMVQLPL*HSPEIL Trigger: AAGAATTTCAGGACTATGCCAGAGAGGTAATTGAAC...CATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CCA 90 bp | AGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACAATATTTTGAGCACTGAAAAATTCTaGAACTACACAATGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: RALKNSGTTQWSWLHNILSTEKF*NYTMVM Trigger: CATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCT...CAAAATATTGTGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS TCA 90 bp | AGCATCTCTGACGAGGTGTCCATGATGCTCCTAGATCTGGAAAAGTaGCTGTGGCGCCAAGCGCCGCGGACGCCAGCCGGTGGAGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SISDEVSMMLLDLEK*LWRQAPRTPAGGVV Trigger: AACAACTCCACCGGCTGGCGTCCGCGGCGCTTGGCGCCACAGTCACTTTTCCAGATCTAGGAGCATCATGGACACCTCGTCAGAGATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS TCA 90 bp | GCACGGAGGCATGCTGCTTCTCTTGTCAACCTGTCAAGGCTATCTTaGATCCTTTTCCACTCATCGTGTGGAATTATGGTGACCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ARRHAASLVNLSRLS*ILFHSSCGIMVTCW Trigger: CCAGCAGGTCACCATAATTCCACACGATGAGTGGAAAAGGATTCAAGATAGCCTTGACAGGTTGACAAGAGAAGCAGCATGCCTCCGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | ATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAGGGGAAGGCATGCTGCTTCTCTaGTCAACCTGTCAAGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: IPSIGKADKVTRSCGEGEGMLLL*STCQGY Trigger: ATAGCCTTGACAGGTTGACAAGAGAAGCAGCATGCC...TTCCCCTTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS GCA 90 bp | CACTTCTTGAGATCGCAAATGCATTTCTTTCTTTGCCTTTCTTTCTaGACGGAGGCATGCTGCTTCTCTTGTCAACCTGTCAAGGCTATC | + |
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Preference number: 5 (lower is better) Translates to: HFLRSQMHFFLCLSF*TEACCFSCQPVKAI Trigger: GATAGCCTTGACAGGTTGACAAGAGAAGCAGCATGCCTCCGTGCAGAAAGAAAGGCAAAGAAAGAAATGCATTTGCGATCTCAAGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS GCA 90 bp | CCAGTGTTTTACCACTTCTTGAGATCGCAAATGCATTTCTTTCTTTaGCTTTCTTTCTGCACGGAGGCATGCTGCTTCTCTTGTCAACCT | + |
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Preference number: 5 (lower is better) Translates to: PVFYHFLRSQMHFFL*LSFCTEACCFSCQP Trigger: AGGTTGACAAGAGAAGCAGCATGCCTCCGTGCAGAAAGAAAGGCAAAGAAAGAAATGCATTTGCGATCTCAAGAAGTGGTAAAACACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS CCA 90 bp | TGTCAACCTGTCAAGGCTATCTTGAATCCTTTTCCACTCATCGTGTaGAATTATGGTGACCTGCTGGAGATCTACTTTGGGGAACAGTTT | + |
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Preference number: 5 (lower is better) Translates to: CQPVKAILNPFPLIV*NYGDLLEIYFGEQF Trigger: AAACTGTTCCCCAAAGTAGATCTCCAGCAGGTCACCATAATTCCACACGATGAGTGGAAAAGGATTCAAGATAGCCTTGACAGGTTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419478.1 |
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| CDS-3UTR CAA 90 bp | ATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAGGGGAAAGGCAGATAGAGAACTaGATCTTCTTCAGAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: IPSIGKADKVTRSCGEGERQIEN*IFFRVS Trigger: AGAAACTCTGAAGAAGATCAAGTTCTCTATCTGCCT...TTCCCCTTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | ATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAGGGGAACATGACAGCCAGCAATaGTTCTTTAGCCTCTATTTT | + |
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Preference number: 5 (lower is better) Translates to: IPSIGKADKVTRSCGEGEHDSQQ*FFSLYF Trigger: AAAATAGAGGCTAAAGAACAATTGCTGGCTGTCATG...TTCCCCTTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | ATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAGGGGAAGGCATCTTGAACCTCTaGATGTTCTTTATCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: IPSIGKADKVTRSCGEGEGILNL*MFFISF Trigger: AAAGCTGATAAAGAACATCAAGAGGTTCAAGATGCC...TTCCCCTTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS GCA 90 bp | CAAATGCATTTCTTTCTTTGCCTTTCTTTCTGCACGGAGGCATGCTaGTTCTCTTGTCAACCTGTCAAGGCTATCTTGAATCCTTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: QMHFFLCLSFCTEAC*FSCQPVKAILNPFP Trigger: TGGAAAAGGATTCAAGATAGCCTTGACAGGTTGACAAGAGAAGCAGCATGCCTCCGTGCAGAAAGAAAGGCAAAGAAAGAAATGCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS GCA 90 bp | TCGCAAATGCATTTCTTTCTTTGCCTTTCTTTCTGCACGGAGGCATaGTGCTTCTCTTGTCAACCTGTCAAGGCTATCTTGAATCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SQMHFFLCLSFCTEA*CFSCQPVKAILNPF Trigger: AAAAGGATTCAAGATAGCCTTGACAGGTTGACAAGAGAAGCAGCATGCCTCCGTGCAGAAAGAAAGGCAAAGAAAGAAATGCATTTGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | ATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAGGGGAATTCCAGATCAAGAATTaGTCTTTCTGCCTCTATTTC | + |
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Preference number: 5 (lower is better) Translates to: IPSIGKADKVTRSCGEGEFQIKN*SFCLYF Trigger: GAAATAGAGGCAGAAAGACAAATTCTTGATCTGGAA...TTCCCCTTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | GGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGCTGGAGATCTACTTaGCTAGGTAGAAGAGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GMGFLVRALKNSGTTQWSCWRST*LGRRGR Trigger: TCTGCCTCTTCTACCTAGCAAAGTAGATCTCCAGCA...TGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | ATACCCAGTATAGGCAAAGCAGATAAAGTTACCAGGAGCTGTGGGGAAGGGGAATGCTGTTCTACAGCTTaGATAATATGTTTATCCTGC | + |
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Preference number: 5 (lower is better) Translates to: IPSIGKADKVTRSCGEGECCSTA*IICLSC Trigger: GCAGGATAAACATATTATCAAAGCTGTAGAACAGCA...TTCCCCTTCCCCACAGCTCCTGGTAACTTTATCTGCTTTGCCTATACTGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | TATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGCCTGTCAAGGCTATCTaGAATCCTTTTCCACTCATC | + |
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Preference number: 5 (lower is better) Translates to: YGVSSKSTEKFWNYTMVMPVKAI*NPFPLI Trigger: GATGAGTGGAAAAGGATTCAAGATAGCCTTGACAGG...CATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | GGTATGGGGTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCAGTGTTTTACCACTTCTaGAGATCGCAAATGCATTTC | + |
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Preference number: 5 (lower is better) Translates to: GMGFLVRALKNSGTTQWSVFYHF*RSQMHF Trigger: GAAATGCATTTGCGATCTCAAGAAGTGGTAAAACAC...TGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAACCCCATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | GTTTCTAGTAAGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACTTATTTTTGGCCATTaGCTGAATATGGGCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: VSSKSTEKFWNYTMVMATLIFGH*LNMGIL Trigger: CAAGATGCCCATATTCAGCAAATGGCCAAAAATAAG...TGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCTTACTAGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | AGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACAATATTTTGTCATCACGCTTCTTTTaGGCTTCAAGTTTCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RALKNSGTTQWSWLHNILSSRFF*ASSFCS Trigger: AGAACAGAAACTTGAAGCCAAAAAGAAGCGTGATGA...CAAAATATTGTGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | AGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACAATATTTTGCTGAATATGGGCATCTaGAACCTCTTGATGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: RALKNSGTTQWSWLHNILLNMGI*NLLMFF Trigger: AAAGAACATCAAGAGGTTCAAGATGCCCATATTCAG...CAAAATATTGTGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS-3UTR CAA 90 bp | AGAGCACTGAAAAATTCTGGAACTACACAATGGTCATGGCTACACAATATTTTGAAAGCTTTTTCAATGTaGAGTTTCAACTGTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RALKNSGTTQWSWLHNILKAFSM*SFNCSS Trigger: GGAGGAACAGTTGAAACTCAACATTGAAAAAGCTTT...CAAAATATTGTGTAGCCATGACCATTGTGTAGTTCCAGAATTTTTCAGTGCTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS TCA 72 bp | GACGAGGTGTCCATGATGCTCCTAGATCTGGAAAAGTaGCTGTGGCGCCAAGCGCCGCGGACGCCAGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: DEVSMMLLDLEK*LWRQAPRTPAG Trigger: ACCGGCTGGCGTCCGCGGCGCTTGGCGCCACAGTCACTTTTCCAGATCTAGGAGCATCATGGACACCTCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS TCA 72 bp | CCGTCCACAGCGCCGTCCAAACCGTACCAGCATCTCTaGCGAGGTGTCCATGATGCTCCTAGATCTGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: PSTAPSKPYQHL*RGVHDAPRSGK Trigger: TTTTCCAGATCTAGGAGCATCATGGACACCTCGTCAGAGATGCTGGTACGGTTTGGACGGCGCTGTGGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421028.1 ENST00000447353.6 |
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| CDS CAA 90 bp | TGCACGGAGGCATGCTGCTTCTCTTGTCAACCTGTCAAGGCTATCTaGAATCCTTTTCCACTCATCGTGTGGAATTATGGTGACCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CTEACCFSCQPVKAI*NPFPLIVWNYGDLL Trigger: CAGCAGGTCACCATAATTCCACACGATGAGTGGAAAAGGATTCAAGATAGCCTTGACAGGTTGACAAGAGAAGCAGCATGCCTCCGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS CAA 72 bp | TTGCCTTTCTTTCTGCACGGAGGCATGCTGCTTCTCTaGTCAACCTGTCAAGGCTATCTTGAATCCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LPFFLHGGMLLL*STCQGYLESFS Trigger: GGAAAAGGATTCAAGATAGCCTTGACAGGTTGACAAGAGAAGCAGCATGCCTCCGTGCAGAAAGAAAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS GCA 72 bp | ATCCTTTTCCACTCATCGTGTGGAATTATGGTGACCTaGTGGAGATCTACTTTGCTAGGTAGAAGAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ILFHSSCGIMVT*WRSTLLGRRGR Trigger: TCTGCCTCTTCTACCTAGCAAAGTAGATCTCCAGCAGGTCACCATAATTCCACACGATGAGTGGAAAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS CAA 90 bp | TCCAGTGTTTTACCACTTCTTGAGATCGCAAATGCATTTCTTTCTTaGCCTTTCTTTCTGCACGGAGGCATGCTGCTTCTCTTGTCAACC | + |
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Preference number: 6 (lower is better) Translates to: SSVLPLLEIANAFLS*PFFLHGGMLLLLST Trigger: GGTTGACAAGAGAAGCAGCATGCCTCCGTGCAGAAAGAAAGGCAAAGAAAGAAATGCATTTGCGATCTCAAGAAGTGGTAAAACACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS TCA 72 bp | CATGCTGCTTCTCTTGTCAACCTGTCAAGGCTATCTTaGATCCTTTTCCACTCATCGTGTGGAATTATGGTG | + |
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Preference number: 6 (lower is better) Translates to: HAASLVNLSRLS*ILFHSSCGIMV Trigger: CACCATAATTCCACACGATGAGTGGAAAAGGATTCAAGATAGCCTTGACAGGTTGACAAGAGAAGCAGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS CAA 72 bp | GCATGCTGCTTCTCTTGTCAACCTGTCAAGGCTATCTaGAATCCTTTTCCACTCATCGTGTGGAATTATGGT | + |
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Preference number: 6 (lower is better) Translates to: ACCFSCQPVKAI*NPFPLIVWNYG Trigger: ACCATAATTCCACACGATGAGTGGAAAAGGATTCAAGATAGCCTTGACAGGTTGACAAGAGAAGCAGCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS TCA 72 bp | GACCTGCTGGAGATCTACTTTGGGGAACAGTTTAAGTaGTATTCGTCTGAGAAGTTCCGATATTGGCATGAT | + |
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Preference number: 6 (lower is better) Translates to: DLLEIYFGEQFK*YSSEKFRYWHD Trigger: ATCATGCCAATATCGGAACTTCTCAGACGAATATCACTTAAACTGTTCCCCAAAGTAGATCTCCAGCAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419478.1 |
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| CDS GCA 72 bp | ATCCTTTTCCACTCATCGTGTGGAATTATGGTGACCTaGTGGAGATCTACTTTGGGGAACAGTTTAAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: ILFHSSCGIMVT*WRSTLGNSLSD Trigger: ATCACTTAAACTGTTCCCCAAAGTAGATCTCCAGCAGGTCACCATAATTCCACACGATGAGTGGAAAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419478.1 |
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| CDS CAA 90 bp | TCAAGAATTTGTCTTTCTGCCTCTATTTCTTCATCACGCTTCTTTTaGGCTTCAAGTTTCTGTTCTTTCATCCCCTGTACTTTCCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: SRICLSASISSSRFF*ASSFCSFIPCTFLR Trigger: GCGAAGGAAAGTACAGGGGATGAAAGAACAGAAACTTGAAGCCAAAAAGAAGCGTGATGAAGAAATAGAGGCAGAAAGACAAATTCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421028.1 |
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| CDS CAA 90 bp | TTCTTTCATCCCTGCATATGTATTAGTCCAGTGTTTTACCACTTCTaGAGATCGCAAATGCATTTCTTTCTTTGCCTTTCTTTCTGCACG | + |
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Preference number: 6 (lower is better) Translates to: FFHPCICISPVFYHF*RSQMHFFLCLSFCT Trigger: CGTGCAGAAAGAAAGGCAAAGAAAGAAATGCATTTGCGATCTCAAGAAGTGGTAAAACACTGGACTAATACATATGCAGGGATGAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS CAA 72 bp | CCCTGCATATGTATTAGTCCAGTGTTTTACCACTTCTaGAGATCGCAAATGCATTTCTTTCTTTGCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PCICISPVFYHF*RSQMHFFLCLS Trigger: AGAAAGGCAAAGAAAGAAATGCATTTGCGATCTCAAGAAGTGGTAAAACACTGGACTAATACATATGCAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS TCA 72 bp | CCTGCATATGTATTAGTCCAGTGTTTTACCACTTCTTaGGATCGCAAATGCATTTCTTTCTTTGCCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PAYVLVQCFTTS*DRKCISFFAFL Trigger: AAGAAAGGCAAAGAAAGAAATGCATTTGCGATCTCAAGAAGTGGTAAAACACTGGACTAATACATATGCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS CAA 90 bp | TCAAGAATTTGTCTTTCTGCCTCTATTTCTTCATCACGCTTCTTTTaGGCTTCAAGTTTCTGTTCTTTCATCCCTGCATATGTATTAGTC | + |
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Preference number: 6 (lower is better) Translates to: SRICLSASISSSRFF*ASSFCSFIPAYVLV Trigger: GACTAATACATATGCAGGGATGAAAGAACAGAAACTTGAAGCCAAAAAGAAGCGTGATGAAGAAATAGAGGCAGAAAGACAAATTCTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419478.1 ENST00000447353.6 |
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| CDS CAA 90 bp | TCAGCCTCAGCTTCTGCAATATCTCTAGCAATAATCATATCTTCATaGTCAAGTTTCTCTTTCAACAGTTCACTCAGGAAGTTATGTATT | + |
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Preference number: 6 (lower is better) Translates to: SASASAISLAIIISS*SSFSFNSSLRKLCI Trigger: AATACATAACTTCCTGAGTGAACTGTTGAAAGAGAAACTTGACAATGAAGATATGATTATTGCTAGAGATATTGCAGAAGCTGAGGCTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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| CDS GCA 72 bp | GTATATTTCTTCTTCCAGATCAAGAATTTGTCTTTCTaGCTCTATTTCTTCATCACGCTTCTTTTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: VYFFFQIKNLSF*LYFFITLLFGF Trigger: GAAGCCAAAAAGAAGCGTGATGAAGAAATAGAGGCAGAAAGACAAATTCTTGATCTGGAAGAAGAAATATAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000419478.1 ENST00000421028.1 ENST00000447353.6 |
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| CDS CAA 72 bp | GCTTCTGCAATATCTCTAGCAATAATCATATCTTCATaGTCAAGTTTCTCTTTCAACAGTTCACTCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ASAISLAIIISS*SSFSFNSSLRK Trigger: CTTCCTGAGTGAACTGTTGAAAGAGAAACTTGACAATGAAGATATGATTATTGCTAGAGATATTGCAGAAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447353.6 |
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