Pregenerated sensors for CCDC160 (Homo sapiens)
Ensembl gene IDs: ENSG00000203952Ensembl transcript IDs: ENST00000370809.4, ENST00000517294.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTGTGTACACACACACACACACACACACACACACACTCTGATATaGGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACT | + |
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Preference number: 1 (lower is better) Translates to: VCVHTHTHTHTHTLI*DFQSFVSICIPAIT Trigger: AGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| 3UTR-3UTR TCA 90 bp | ATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAACTGATTTGGCTCAATaGCTTGCCTACTGGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: MRFPKLRFHLYSCNNFIRTDLAQ*LAYWKD Trigger: ATCCTTCCAGTAGGCAAGTCATTGAGCCAAATCAGT...TCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| 3UTR TCA 72 bp | CACACACACACACACACACACACACACACTCTGATATaGGATTTCCAAAGCTTCGTTTCCATTTGTATTCCT | + |
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Preference number: 3 (lower is better) Translates to: HTHTHTHTHTLI*DFQSFVSICIP Trigger: AGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| 3UTR-3UTR CAA 90 bp | ATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAATTTGGCTCAATGACTaGCCTACTGGAAGGATTTTT | + |
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Preference number: 3 (lower is better) Translates to: MRFPKLRFHLYSCNNFIRIWLND*PTGRIF Trigger: AAAAATCCTTCCAGTAGGCAAGTCATTGAGCCAAAT...TCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR GCA 90 bp | GATATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCCGCGGGCCGCGCGGTTaGCTAGCAACGAGCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: DMRFPKLRFHLYSCNNFIRGPRG*LATSLP Trigger: GGGCAGGCTCGTTGCTAGGCAACCGCGCGGCCCGCG...GATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CCA 90 bp | CTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAAAGCAGAAGCAGGGGGCCGGACGCTaGCGTCCCGCAGTCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LRFHLYSCNNFIRKRKQKQGAGR*RPAVKA Trigger: GGCTTTGACTGCGGGACGCCAGCGTCCGGCCCCCTG...CTTCTGCTTTCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR TCA 90 bp | GATATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCACTGAGCATGCCCGGTaGAGCGGGTACCGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: DMRFPKLRFHLYSCNNFITEHAR*SGYRGG Trigger: GCCGCCGCGGTACCCGCTTCACCGGGCATGCTCAGT...GATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR TCA 90 bp | ATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAGCCTGGCCGGAGGACTaGGCATGCCCGGTGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: MRFPKLRFHLYSCNNFIRAWPED*ACPVKR Trigger: CCGCTTCACCGGGCATGCTCAGTCCTCCGGCCAGGC...TCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR GCA 90 bp | CTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAAAGCAGAAGAACTGGAAGCGTGGATaGCGTCTGGAGAGCCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: LRFHLYSCNNFIRKRKQKNWKRG*RLESPN Trigger: GTTCGGGCTCTCCAGACGGCATCCACGCTTCCAGTT...CTTCTGCTTTCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CCA 90 bp | TGTACACACACACACACACACACACACACACACTCTGATATGAGATTTCCAAAGTTCTCCAGTTTGAACTaGAAGCGTGGATGCCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: CTHTHTHTHTHSDMRFPKFSSLN*KRGCRL Trigger: CAGACGGCATCCACGCTTCCAGTTCAAACTGGAGAA...CTTTGGAAATCTCATATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CCA 90 bp | TTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAAGCGTGGATGCCGTCTaGAGAGCCCGAACCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: FPKLRFHLYSCNNFIRKRSVDAV*RARTSL Trigger: AAGAGAGGTTCGGGCTCTCCAGACGGCATCCACGCT...TCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR TCA 90 bp | TGTACACACACACACACACACACACACACACACTCTGATATGAGATTTCCAAAGGGTTCAATTTGTGGATaGCTTCTTTGGCTTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CTHTHTHTHTHSDMRFPKGSICG*LLWLAG Trigger: TCCAGCAAGCCAAAGAAGTCATCCACAAATTGAACC...CTTTGGAAATCTCATATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR TCA 90 bp | GATATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCCCTCCTTCTCCAGTTTaGACTGGAAGCGTGGATGCC | + |
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Preference number: 4 (lower is better) Translates to: DMRFPKLRFHLYSCNNFIPPSPV*TGSVDA Trigger: GGCATCCACGCTTCCAGTTCAAACTGGAGAAGGAGG...GATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CCA 90 bp | GATATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCTTTGAACTGGAAGCGTaGATGCCGTCTGGAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: DMRFPKLRFHLYSCNNFIFELEA*MPSGEP Trigger: GGGCTCTCCAGACGGCATCCACGCTTCCAGTTCAAA...GATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR TCA 90 bp | TGTACACACACACACACACACACACACACACACTCTGATATGAGATTTCCAAAGCACACACACACACTCTaGTATGAGATTTCCAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: CTHTHTHTHTHSDMRFPKHTHTL*YEISKA Trigger: AGCTTTGGAAATCTCATATCAGAGTGTGTGTGTGTG...CTTTGGAAATCTCATATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CCA 90 bp | TGTACACACACACACACACACACACACACACACTCTGATATGAGATTTCCAAAGTTCCAATATACTTCCTaGGGTCCAAGATCTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: CTHTHTHTHTHSDMRFPKFQYTS*GPRSSV Trigger: GACAGAAGATCTTGGACCCCAGGAAGTATATTGGAA...CTTTGGAAATCTCATATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR TCA 90 bp | TGTACACACACACACACACACACACACACACACTCTGATATGAGATTTCCAAAGTTTCCAACCTCGGTTTaGTGCTTTAACTTCCTAACA | + |
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Preference number: 4 (lower is better) Translates to: CTHTHTHTHTHSDMRFPKFPTSV*CFNFLT Trigger: TGTTAGGAAGTTAAAGCATCAAACCGAGGTTGGAAA...CTTTGGAAATCTCATATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR GCA 90 bp | CTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAAAGCAGAAGTCCCTTGCTGCTATCTaGAGTCGTTTGTTCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LRFHLYSCNNFIRKRKQKSLAAI*SRLFRR Trigger: TCTTCTGAACAAACGACTGCAGATAGCAGCAAGGGA...CTTCTGCTTTCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CCA 90 bp | TGTACACACACACACACACACACACACACACACTCTGATATGAGATTTCCAAAGAAATCCCCAGTAAAGTaGTCAAGGATACTTGATGAT | + |
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Preference number: 4 (lower is better) Translates to: CTHTHTHTHTHSDMRFPKKSPVK*SRILDD Trigger: ATCATCAAGTATCCTTGACCACTTTACTGGGGATTT...CTTTGGAAATCTCATATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CCA 90 bp | CTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAAAGCAGAAGAGATCTTCTGTCTACTaGATATCTCTGCCCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LRFHLYSCNNFIRKRKQKRSSVY*ISLPSF Trigger: GAAGGAGGGCAGAGATATCCAGTAGACAGAAGATCT...CTTCTGCTTTCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR TCA 90 bp | TTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAACTGATTTGGCTCAATaGCTTGCCTACTGGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FPKLRFHLYSCNNFIRKRTDLAQ*LAYWKD Trigger: ATCCTTCCAGTAGGCAAGTCATTGAGCCAAATCAGT...TCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR GCA 90 bp | ATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGACTTCCATTCCCTTGCTaGTATCTGCAGTCGTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: MRFPKLRFHLYSCNNFIRLPFPC*YLQSFV Trigger: AACAAACGACTGCAGATAGCAGCAAGGGAATGGAAG...TCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR TCA 90 bp | CTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAAAGCAGAAGACACACACTCTGATATaGGATTTCCAAAGCTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: LRFHLYSCNNFIRKRKQKTHTLI*DFQSFV Trigger: AACGAAGCTTTGGAAATCTCATATCAGAGTGTGTGT...CTTCTGCTTTCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR GCA 90 bp | ATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGATTTCTTCCATTCCCTTaGTGCTATCTGCAGTCGTTT | + |
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Preference number: 4 (lower is better) Translates to: MRFPKLRFHLYSCNNFIRFLPFP*CYLQSF Trigger: AAACGACTGCAGATAGCAGCAAGGGAATGGAAGAAA...TCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR GCA 90 bp | TTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAATGACTTCTTTGGCTTaGTGGAGCTGTTCACTTAAG | + |
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Preference number: 4 (lower is better) Translates to: FPKLRFHLYSCNNFIRKRMTSLA*WSCSLK Trigger: CTTAAGTGAACAGCTCCAGCAAGCCAAAGAAGTCAT...TCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR TCA 90 bp | TTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGATCCGTCTCTGTTTCTTaGAAATTTAGGGGTTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: FPKLRFHLYSCNNFIRKRSVSVS*KFRGFV Trigger: CACAAAACCCCTAAATTTTCAAGAAACAGAGACGGA...TCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR TCA 90 bp | ATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGATTCATAGTCACTTTTTaGAGCATCCGTCTCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: MRFPKLRFHLYSCNNFIRFIVTF*SIRLCF Trigger: GAAACAGAGACGGATGCTTCAAAAAGTGACTATGAA...TCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CCA 90 bp | GATATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCACTTCTTTGGCTTGCTaGAGCTGTTCACTTAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: DMRFPKLRFHLYSCNNFITSLAC*SCSLKF Trigger: AAACTTAAGTGAACAGCTCCAGCAAGCCAAAGAAGT...GATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| 3UTR CAA 72 bp | CACTCTGATATGAGATTTCCAAAGCTTCGTTTCCATTaGTATTCCTGCAATAACTTCATCAGAAAGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: HSDMRFPKLRFH*YSCNNFIRKRK Trigger: CTTTCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATCAGAGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CCA 90 bp | ATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAATCAATGAACACAGATaGAAAAATATTCACGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: MRFPKLRFHLYSCNNFIRINEHR*KNIHVP Trigger: TGGCACGTGAATATTTTTCCATCTGTGTTCATTGAT...TCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | TTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAGCGCGGGCCGCGCGGTaGCCTAGCAACGAGCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: FPKLRFHLYSCNNFIRKRARAAR*PSNEPA Trigger: GGCAGGCTCGTTGCTAGGCAACCGCGCGGCCCGCGC...TCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | TGTACACACACACACACACACACACACACACACTCTGATATGAGATTTCCAAAGCCCTCCTTCTCCAGTTaGAACTGGAAGCGTGGATGC | + |
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Preference number: 5 (lower is better) Translates to: CTHTHTHTHTHSDMRFPKPSFSS*NWKRGC Trigger: GCATCCACGCTTCCAGTTCAAACTGGAGAAGGAGGG...CTTTGGAAATCTCATATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | TGTACACACACACACACACACACACACACACACTCTGATATGAGATTTCCAAAGTTGTGGATGACTTCTTaGGCTTGCTGGAGCTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: CTHTHTHTHTHSDMRFPKLWMTS*ACWSCS Trigger: TGAACAGCTCCAGCAAGCCAAAGAAGTCATCCACAA...CTTTGGAAATCTCATATCAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | CTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAAAGCAGAAGGTTCTCAGTTCATTCTaGATGACACTGAGCTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: LRFHLYSCNNFIRKRKQKVLSSF*MTLSSP Trigger: CGGAGAGCTCAGTGTCATCAAGAATGAACTGAGAAC...CTTCTGCTTTCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS GCA 90 bp | CCTGAAACTTTCTACTGGACAAATTATAAATTTCTTCCATTCCCTTaGTGCTATCTGCAGTCGTTTGTTCAGAAGAAGATTCAGGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: PETFYWTNYKFLPFP*CYLQSFVQKKIQAQ Trigger: CTGAGCCTGAATCTTCTTCTGAACAAACGACTGCAGATAGCAGCAAGGGAATGGAAGAAATTTATAATTTGTCCAGTAGAAAGTTTCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370809.4 ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | CTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAAAGCAGAAGAGGCTCTGTTATTTCTaGCTTGTAGGGTCTTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LRFHLYSCNNFIRKRKQKRLCYF*LVGSSQ Trigger: CTGAGAAGACCCTACAAGCAAGAAATAACAGAGCCT...CTTCTGCTTTCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS GCA 90 bp | GAAACTTTCTACTGGACAAATTATAAATTTCTTCCATTCCCTTGCTaGTATCTGCAGTCGTTTGTTCAGAAGAAGATTCAGGCTCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: ETFYWTNYKFLPFPC*YLQSFVQKKIQAQK Trigger: CTTCTGAGCCTGAATCTTCTTCTGAACAAACGACTGCAGATAGCAGCAAGGGAATGGAAGAAATTTATAATTTGTCCAGTAGAAAGTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370809.4 ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | TTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAGCTATCTGCAGTCGTTaGTTCAGAAGAAGATTCAGG | + |
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Preference number: 5 (lower is better) Translates to: FPKLRFHLYSCNNFIRKRAICSR*FRRRFR Trigger: CCTGAATCTTCTTCTGAACAAACGACTGCAGATAGC...TCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | GATATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCATTTCTTCCATTCCCTaGCTGCTATCTGCAGTCGTT | + |
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Preference number: 5 (lower is better) Translates to: DMRFPKLRFHLYSCNNFIISSIP*LLSAVV Trigger: AACGACTGCAGATAGCAGCAAGGGAATGGAAGAAAT...GATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | TTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAAAGAGAGCTCTCCGCGGATCTTaGCCATTTCTAATTCATAAT | + |
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Preference number: 5 (lower is better) Translates to: FPKLRFHLYSCNNFIRKRALRGS*PFLIHN Trigger: ATTATGAATTAGAAATGGCAAAGATCCGCGGAGAGC...TCTCTTTCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | ATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAGAGTTCATAGTCACTTTTaGAAGCATCCGTCTCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: MRFPKLRFHLYSCNNFIRVHSHF*KHPSLF Trigger: AAACAGAGACGGATGCTTCAAAAAGTGACTATGAAC...TCTGATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | GATATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCTTCTCTAGGTTCAATTaGTGGATGACTTCTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: DMRFPKLRFHLYSCNNFIFSRFN*WMTSLA Trigger: AGCCAAAGAAGTCATCCACAAATTGAACCTAGAGAA...GATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | GATATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCATTTGGCTCAATGACTaGCCTACTGGAAGGATTTTT | + |
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Preference number: 5 (lower is better) Translates to: DMRFPKLRFHLYSCNNFIIWLND*PTGRIF Trigger: AAAAATCCTTCCAGTAGGCAAGTCATTGAGCCAAAT...GATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | GATATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCAAGCTTCGTTTCCATTaGTATTCCTGCAATAACTTC | + |
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Preference number: 5 (lower is better) Translates to: DMRFPKLRFHLYSCNNFIKLRFH*YSCNNF Trigger: GAAGTTATTGCAGGAATACAAATGGAAACGAAGCTT...GATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS-3UTR CAA 90 bp | GATATGAGATTTCCAAAGCTTCGTTTCCATTTGTATTCCTGCAATAACTTCATCGTGCCAAAGACATATTaGCTTACGAGATCACAAAAT | + |
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Preference number: 5 (lower is better) Translates to: DMRFPKLRFHLYSCNNFIVPKTY*LTRSQN Trigger: ATTTTGTGATCTCGTAAGCAAATATGTCTTTGGCAC...GATGAAGTTATTGCAGGAATACAAATGGAAACGAAGCTTTGGAAATCTCATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS TCA 72 bp | CGCTGGCGTCCCGCAGTCAAAGCCTGGCCGGAGGACTaGGCATGCCCGGTGAAGCGGGTACCGCGGCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RWRPAVKAWPED*ACPVKRVPRRL Trigger: AAGCCGCCGCGGTACCCGCTTCACCGGGCATGCTCAGTCCTCCGGCCAGGCTTTGACTGCGGGACGCCAGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370809.4 ENST00000517294.5 |
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| CDS CCA 72 bp | GCACCTCTTCCAATATCTGGAAGCGTGGATGCCGTCTaGAGAGCCCGAACCTCTCTTCCTCAAAGACAACCA | + |
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Preference number: 6 (lower is better) Translates to: APLPISGSVDAV*RARTSLPQRQP Trigger: TGGTTGTCTTTGAGGAAGAGAGGTTCGGGCTCTCCAGACGGCATCCACGCTTCCAGATATTGGAAGAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370809.4 |
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| CDS CCA 72 bp | CAATATACTTCCTGGGGTCCAAGATCTTCTGTCTACTaGATATCTCTGCCCTCCTTCTCCAGTTTGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: QYTSWGPRSSVY*ISLPSFSSLNW Trigger: CCAGTTCAAACTGGAGAAGGAGGGCAGAGATATCCAGTAGACAGAAGATCTTGGACCCCAGGAAGTATATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517294.5 |
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| CDS CAA 72 bp | CTTGCTTGTAGGGTCTTCTCAGTTCTCAGTTCATTCTaGATGACACTGAGCTCTCCGCGGATCTTTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: LACRVFSVLSSF*MTLSSPRIFAI Trigger: AATGGCAAAGATCCGCGGAGAGCTCAGTGTCATCAAGAATGAACTGAGAACTGAGAAGACCCTACAAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370809.4 ENST00000517294.5 |
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| CDS CAA 72 bp | AATTTCTTCCATTCCCTTGCTGCTATCTGCAGTCGTTaGTTCAGAAGAAGATTCAGGCTCAGAAGTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: NFFHSLAAICSR*FRRRFRLRSLF Trigger: GAAGAGACTTCTGAGCCTGAATCTTCTTCTGAACAAACGACTGCAGATAGCAGCAAGGGAATGGAAGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370809.4 ENST00000517294.5 |
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| CDS CAA 90 bp | CTGTTATTTCTTGCTTGTAGGGTCTTCTCAGTTCTCAGTTCATTCTaGATGACACTGAGCTCTCCGCGGATCTTTGCCATTTCTAATTCA | + |
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Preference number: 6 (lower is better) Translates to: LLFLACRVFSVLSSF*MTLSSPRIFAISNS Trigger: TGAATTAGAAATGGCAAAGATCCGCGGAGAGCTCAGTGTCATCAAGAATGAACTGAGAACTGAGAAGACCCTACAAGCAAGAAATAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370809.4 ENST00000517294.5 |
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| CDS GCA 72 bp | TACTGGACAAATTATAAATTTCTTCCATTCCCTTGCTaGTATCTGCAGTCGTTTGTTCAGAAGAAGATTCAG | + |
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Preference number: 6 (lower is better) Translates to: YWTNYKFLPFPC*YLQSFVQKKIQ Trigger: CTGAATCTTCTTCTGAACAAACGACTGCAGATAGCAGCAAGGGAATGGAAGAAATTTATAATTTGTCCAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370809.4 ENST00000517294.5 |
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