Pregenerated sensors for CCDC15-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000285825Ensembl transcript IDs: ENST00000649496.1, ENST00000655771.1, ENST00000667169.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGGAAGCCGTGCCAGGCTCGCCTCCCTCTTTCATTCTTTTCCCGTaGTTCCCTCTACTGGGACTCCTGACCCTCCTAGTCGCCAGATCA | + |
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Preference number: 5 (lower is better) Translates to: QEAVPGSPPSFILFP*FPLLGLLTLLVARS Trigger: TGATCTGGCGACTAGGAGGGTCAGGAGTCCCAGTAGAGGGAATCACGGGAAAAGAATGAAAGAGGGAGGCGAGCCTGGCACGGCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655771.1 |
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| CDS GCA 90 bp | GCTGCTGCGCCTGGCCATCCTTTGCAAAACTTCTTGAACCACCACTaGACTGTACGTTCATTAGCAGTTCCTGGGCCAAATGCACTCTTG | + |
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Preference number: 5 (lower is better) Translates to: AAAPGHPLQNFLNHH*TVRSLAVPGPNALL Trigger: CAAGAGTGCATTTGGCCCAGGAACTGCTAATGAACGTACAGTGCAGTGGTGGTTCAAGAAGTTTTGCAAAGGATGGCCAGGCGCAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS GCA 90 bp | GAACCACCACTGCACTGTACGTTCATTAGCAGTTCCTGGGCCAAATaGACTCTTGATGTTGCAAGTTGTCTCTGCTGCTTTGCAGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: EPPLHCTFISSSWAK*TLDVASCLCCFAAH Trigger: ATGGGCTGCAAAGCAGCAGAGACAACTTGCAACATCAAGAGTGCATTTGGCCCAGGAACTGCTAATGAACGTACAGTGCAGTGGTGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS GCA 90 bp | GGATCCGAAAAATTTGTTAGCTTAGTTTGTTTCTCCAGGAAGCCGTaGCAGGCTCGCCTCCCTCTTTCATTCTTTTCCCGTGATTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: GSEKFVSLVCFSRKP*QARLPLSFFSRDSL Trigger: GAGGGAATCACGGGAAAAGAATGAAAGAGGGAGGCGAGCCTGGCACGGCTTCCTGGAGAAACAAACTAAGCTAACAAATTTTTCGGATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655771.1 |
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| CDS GCA 90 bp | TTTGGTCATACCATAGACTTTGACAGCACCAATAACCACAACCTCTaGATACACTCAGCTCCAAGCAGCCTACTCTCAGACCACCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: FGHTIDFDSTNNHNL*IHSAPSSLLSDHLL Trigger: TAAGAGGTGGTCTGAGAGTAGGCTGCTTGGAGCTGAGTGTATGCAGAGGTTGTGGTTATTGGTGCTGTCAAAGTCTATGGTATGACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649496.1 ENST00000667169.1 |
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| CDS CCA 90 bp | AAACTTCTTGAACCACCACTGCACTGTACGTTCATTAGCAGTTCCTaGGCCAAATGCACTCTTGATGTTGCAAGTTGTCTCTGCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: KLLEPPLHCTFISSS*AKCTLDVASCLCCF Trigger: AAAGCAGCAGAGACAACTTGCAACATCAAGAGTGCATTTGGCCCAGGAACTGCTAATGAACGTACAGTGCAGTGGTGGTTCAAGAAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS GCA 90 bp | TCCTTTCTGTTGACCACTGTCAGCTGCAGGTGTTGCACTTTTCAGTaGCTCATTGATTTGCTAAGCATACTTCTCAGATGTAATGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: SFLLTTVSCRCCTFQ*LIDLLSILLRCNGF Trigger: GAAACCATTACATCTGAGAAGTATGCTTAGCAAATCAATGAGGCACTGAAAAGTGCAACACCTGCAGCTGACAGTGGTCAACAGAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 90 bp | TCTCATGTAGCTATAAGAGGATCAGCTTCAATGATTGCTCTCAATTaGTCATTGTCAACTTCCCATGGCCGGTCACTATGCTCATCATCT | + |
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Preference number: 5 (lower is better) Translates to: SHVAIRGSASMIALN*SLSTSHGRSLCSSS Trigger: AGATGATGAGCATAGTGACCGGCCATGGGAAGTTGACAATGACCAATTGAGAGCAATCATTGAAGCTGATCCTCTTATAGCTACATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS GCA 90 bp | TTCCAAGTTCTTTCACAGGGCAGCTGGCAGAATGTTTCAGTTTCTTaGCATGTGATCCTCTTTATAGAACTGCTAATGATGTACATGGCT | + |
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Preference number: 5 (lower is better) Translates to: FQVLSQGSWQNVSVS*HVILFIELLMMYMA Trigger: AGCCATGTACATCATTAGCAGTTCTATAAAGAGGATCACATGGCAAGAAACTGAAACATTCTGCCAGCTGCCCTGTGAAAGAACTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS GCA 90 bp | CAAAACTTCATAGATCAATTTGTTCAACTTTTGAAGGGTTGGTTGTaGGACATGCAGTCGGGCATTGTAGTTGCTGTGGAGAAGAATTGG | + |
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Preference number: 5 (lower is better) Translates to: QNFIDQFVQLLKGWL*DMQSGIVVAVEKNW Trigger: CCAATTCTTCTCCACAGCAACTACAATGCCCGACTGCATGTCGCACAACCAACCCTTCAAAAGTTGAACAAATTGATCTATGAAGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS TCA 90 bp | TTACAGCAGAGCTTGCAGCAGAGAGGGAGACCACTCAACAGGCCGTaGTGTCCAAATATAATAAGATGTATGAAACAGTACTGTAAAATT | + |
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Preference number: 5 (lower is better) Translates to: LQQSLQQRGRPLNRP*CPNIIRCMKQYCKI Trigger: AATTTTACAGTACTGTTTCATACATCTTATTATATTTGGACATCACGGCCTGTTGAGTGGTCTCCCTCTCTGCTGCAAGCTCTGCTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655771.1 |
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| CDS TCA 90 bp | GTTGAGATGCTTGAAGAAGTGGTAGTTGGTTGGCCACAGGTCAGATaGATATGGTGGATGAGGCAAAACTTCATAGATCAATTTGTTCAA | + |
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Preference number: 5 (lower is better) Translates to: VEMLEEVVVGWPQVR*IWWMRQNFIDQFVQ Trigger: TTGAACAAATTGATCTATGAAGTTTTGCCTCATCCACCATATTCATCTGACCTGTGGCCAACCAACTACCACTTCTTCAAGCATCTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS TCA 90 bp | GTAATGTATGTTAATCGAATGAATAAATTATCCTACAGAGATAATTaGGTGTCTCTGGATTACAGCAGAGCTTGCAGCAGAGAGGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: VMYVNRMNKLSYRDN*VSLDYSRACSREGD Trigger: GTCTCCCTCTCTGCTGCAAGCTCTGCTGTAATCCAGAGACACTCAATTATCTCTGTAGGATAATTTATTCATTCGATTAACATACATTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655771.1 |
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| CDS TCA 90 bp | AGCTCCTTTGCAAAACTTTCTTTCTTTCTTTCTTTCTTTTTAAATTaGGACGGAGTCTTGTTCTGTCACTGGAGTGCAGTGGCACAATCT | + |
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Preference number: 5 (lower is better) Translates to: SSFAKLSFFLSFFLN*DGVLFCHWSAVAQS Trigger: AGATTGTGCCACTGCACTCCAGTGACAGAACAAGACTCCGTCTCAATTTAAAAAGAAAGAAAGAAAGAAAGAAAGTTTTGCAAAGGAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 72 bp | CCACCAAACGGTGACCATGACCTGTTTTTGGTGCTTTaGGAAGTGCTGTGGAGCTTCTTCTGGGCCCAACCA | + |
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Preference number: 6 (lower is better) Translates to: PPNGDHDLFLVL*EVLWSFFWAQP Trigger: TGGTTGGGCCCAGAAGAAGCTCCACAGCACTTCCCAAAGCACCAAAAACAGGTCATGGTCACCGTTTGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 72 bp | TTTTTGGTGCTTTGGGAAGTGCTGTGGAGCTTCTTCTaGGCCCAACCATTGAGCTGGTCATTGCCAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: FLVLWEVLWSFF*AQPLSWSLPAV Trigger: AACAGCTGGCAATGACCAGCTCAATGGTTGGGCCCAGAAGAAGCTCCACAGCACTTCCCAAAGCACCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 72 bp | ATGCAGTCGGGCATTGTAGTTGCTGTGGAGAAGAATTaGGTCCTTTCTGTTGACCACTGTCAGCTGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: MQSGIVVAVEKN*VLSVDHCQLQV Trigger: CACCTGCAGCTGACAGTGGTCAACAGAAAGGACCCAATTCTTCTCCACAGCAACTACAATGCCCGACTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 72 bp | GTTTTCTGTTCCTTGCCCCTCTGGGTGGAGGTGGGATaGGTTTCCTTCTTGCTATTCAGTTACTCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: VFCSLPLWVEVG*VSFLLFSYSVL Trigger: AAGCACTGAGTAACTGAATAGCAAGAAGGAAACCCATCCCACCTCCACCCAGAGGGGCAAGGAACAGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667169.1 |
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| CDS CAA 72 bp | GTACGTTCATTAGCAGTTCCTGGGCCAAATGCACTCTaGATGTTGCAAGTTGTCTCTGCTGCTTTGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: VRSLAVPGPNAL*MLQVVSAALQP Trigger: GGGCTGCAAAGCAGCAGAGACAACTTGCAACATCAAGAGTGCATTTGGCCCAGGAACTGCTAATGAACGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS GCA 72 bp | CCTGGCCATCCTTTGCAAAACTTCTTGAACCACCACTaGACTGTACGTTCATTAGCAGTTCCTGGGCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: PGHPLQNFLNHH*TVRSLAVPGPN Trigger: ATTTGGCCCAGGAACTGCTAATGAACGTACAGTGCAGTGGTGGTTCAAGAAGTTTTGCAAAGGATGGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 72 bp | TGGAGGGTCTACTTCCAAGTTCTTTCACAGGGCAGCTaGCAGAATGTTTCAGTTTCTTGCCATGTGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: WRVYFQVLSQGS*QNVSVSCHVIL Trigger: GAGGATCACATGGCAAGAAACTGAAACATTCTGCCAGCTGCCCTGTGAAAGAACTTGGAAGTAGACCCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 72 bp | GAACCACCACTGCACTGTACGTTCATTAGCAGTTCCTaGGCCAAATGCACTCTTGATGTTGCAAGTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: EPPLHCTFISSS*AKCTLDVASCL Trigger: GAGACAACTTGCAACATCAAGAGTGCATTTGGCCCAGGAACTGCTAATGAACGTACAGTGCAGTGGTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS CAA 90 bp | CACTGCACTGTACGTTCATTAGCAGTTCCTGGGCCAAATGCACTCTaGATGTTGCAAGTTGTCTCTGCTGCTTTGCAGCCCATTTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: HCTVRSLAVPGPNAL*MLQVVSAALQPILN Trigger: GTTCAAAATGGGCTGCAAAGCAGCAGAGACAACTTGCAACATCAAGAGTGCATTTGGCCCAGGAACTGCTAATGAACGTACAGTGCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS GCA 72 bp | CTGCACTGTACGTTCATTAGCAGTTCCTGGGCCAAATaGACTCTTGATGTTGCAAGTTGTCTCTGCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LHCTFISSSWAK*TLDVASCLCCF Trigger: AAAGCAGCAGAGACAACTTGCAACATCAAGAGTGCATTTGGCCCAGGAACTGCTAATGAACGTACAGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS GCA 72 bp | AAATTTGTTAGCTTAGTTTGTTTCTCCAGGAAGCCGTaGCAGGCTCGCCTCCCTCTTTCATTCTTTTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: KFVSLVCFSRKP*QARLPLSFFSR Trigger: ACGGGAAAAGAATGAAAGAGGGAGGCGAGCCTGGCACGGCTTCCTGGAGAAACAAACTAAGCTAACAAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655771.1 |
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| CDS GCA 72 bp | GGGTCCTTTCTGTTGACCACTGTCAGCTGCAGGTGTTaGACTTTTCAGTGCCTCATTGATTTGCTAAGCATA | + |
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Preference number: 6 (lower is better) Translates to: GSFLLTTVSCRC*TFQCLIDLLSI Trigger: TATGCTTAGCAAATCAATGAGGCACTGAAAAGTGCAACACCTGCAGCTGACAGTGGTCAACAGAAAGGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 72 bp | CAAACATTATCTCACACAGTTTCTCGTTGGGCGGTCTaGCTCAGGGTCTCTTATGAGGTTGCAGTCAATTGT | + |
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Preference number: 6 (lower is better) Translates to: QTLSHTVSRWAV*LRVSYEVAVNC Trigger: ACAATTGACTGCAACCTCATAAGAGACCCTGAGCCAGACCGCCCAACGAGAAACTGTGTGAGATAATGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649496.1 ENST00000667169.1 |
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| CDS CAA 72 bp | TCATTAGCAGTTCCTGGGCCAAATGCACTCTTGATGTaGCAAGTTGTCTCTGCTGCTTTGCAGCCCATTTTG | + |
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Preference number: 6 (lower is better) Translates to: SLAVPGPNALLM*QVVSAALQPIL Trigger: CAAAATGGGCTGCAAAGCAGCAGAGACAACTTGCAACATCAAGAGTGCATTTGGCCCAGGAACTGCTAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS CAA 72 bp | AATTTCCATAGTCTAATAGTAGCTGTTTTCTGTTCCTaGCCCCTCTGGGTGGAGGTGGGATGGGTTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: NFHSLIVAVFCS*PLWVEVGWVSF Trigger: GAAGGAAACCCATCCCACCTCCACCCAGAGGGGCAAGGAACAGAAAACAGCTACTATTAGACTATGGAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667169.1 |
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| CDS CAA 90 bp | ACTGTACGTTCATTAGCAGTTCCTGGGCCAAATGCACTCTTGATGTaGCAAGTTGTCTCTGCTGCTTTGCAGCCCATTTTGAACTCGAAT | + |
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Preference number: 6 (lower is better) Translates to: TVRSLAVPGPNALLM*QVVSAALQPILNSN Trigger: ATTCGAGTTCAAAATGGGCTGCAAAGCAGCAGAGACAACTTGCAACATCAAGAGTGCATTTGGCCCAGGAACTGCTAATGAACGTACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS CAA 90 bp | ACCACTGTCAGCTGCAGGTGTTGCACTTTTCAGTGCCTCATTGATTaGCTAAGCATACTTCTCAGATGTAATGGTTTCACTGGGATTCGG | + |
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Preference number: 6 (lower is better) Translates to: TTVSCRCCTFQCLID*LSILLRCNGFTGIR Trigger: CCGAATCCCAGTGAAACCATTACATCTGAGAAGTATGCTTAGCAAATCAATGAGGCACTGAAAAGTGCAACACCTGCAGCTGACAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 72 bp | GCTATAAGAGGATCAGCTTCAATGATTGCTCTCAATTaGTCATTGTCAACTTCCCATGGCCGGTCACTATGC | + |
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Preference number: 6 (lower is better) Translates to: AIRGSASMIALN*SLSTSHGRSLC Trigger: GCATAGTGACCGGCCATGGGAAGTTGACAATGACCAATTGAGAGCAATCATTGAAGCTGATCCTCTTATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CAA 72 bp | AGAGGATCAGCTTCAATGATTGCTCTCAATTGGTCATaGTCAACTTCCCATGGCCGGTCACTATGCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: RGSASMIALNWS*STSHGRSLCSS Trigger: TGATGAGCATAGTGACCGGCCATGGGAAGTTGACAATGACCAATTGAGAGCAATCATTGAAGCTGATCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CAA 90 bp | GTAGCTATAAGAGGATCAGCTTCAATGATTGCTCTCAATTGGTCATaGTCAACTTCCCATGGCCGGTCACTATGCTCATCATCTTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: VAIRGSASMIALNWS*STSHGRSLCSSSSR Trigger: CCTTGAAGATGATGAGCATAGTGACCGGCCATGGGAAGTTGACAATGACCAATTGAGAGCAATCATTGAAGCTGATCCTCTTATAGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 72 bp | TTAATACAACAAACATTATCTCACACAGTTTCTCGTTaGGCGGTCTGGCTCAGGGTCTCTTATGAGGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: LIQQTLSHTVSR*AVWLRVSYEVA Trigger: TGCAACCTCATAAGAGACCCTGAGCCAGACCGCCCAACGAGAAACTGTGTGAGATAATGTTTGTTGTATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649496.1 ENST00000667169.1 |
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| CDS CAA 72 bp | AGCTATAAGAGGATCAGCTTCAATGATTGCTCTCAATaGGTCATTGTCAACTTCCCATGGCCGGTCACTATG | + |
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Preference number: 6 (lower is better) Translates to: SYKRISFNDCSQ*VIVNFPWPVTM Trigger: CATAGTGACCGGCCATGGGAAGTTGACAATGACCAATTGAGAGCAATCATTGAAGCTGATCCTCTTATAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CAA 90 bp | TTCTCATGTAGCTATAAGAGGATCAGCTTCAATGATTGCTCTCAATaGGTCATTGTCAACTTCCCATGGCCGGTCACTATGCTCATCATC | + |
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Preference number: 6 (lower is better) Translates to: FSCSYKRISFNDCSQ*VIVNFPWPVTMLII Trigger: GATGATGAGCATAGTGACCGGCCATGGGAAGTTGACAATGACCAATTGAGAGCAATCATTGAAGCTGATCCTCTTATAGCTACATGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS GCA 72 bp | CTTTCACAGGGCAGCTGGCAGAATGTTTCAGTTTCTTaGCATGTGATCCTCTTTATAGAACTGCTAATGATG | + |
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Preference number: 6 (lower is better) Translates to: LSQGSWQNVSVS*HVILFIELLMM Trigger: CATCATTAGCAGTTCTATAAAGAGGATCACATGGCAAGAAACTGAAACATTCTGCCAGCTGCCCTGTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS CCA 72 bp | AACTTTGAACCTCATGTCACCAGAATATACCATGCTTaGGTTTCCAAGCTATACTTACCCACCAACCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: NFEPHVTRIYHA*VSKLYLPTNLQ Trigger: TTGGAGGTTGGTGGGTAAGTATAGCTTGGAAACCCAAGCATGGTATATTCTGGTGACATGAGGTTCAAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667169.1 |
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| CDS CAA 90 bp | AGGCAAAACTTCATAGATCAATTTGTTCAACTTTTGAAGGGTTGGTaGTGCGACATGCAGTCGGGCATTGTAGTTGCTGTGGAGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RQNFIDQFVQLLKGW*CDMQSGIVVAVEKN Trigger: ATTCTTCTCCACAGCAACTACAATGCCCGACTGCATGTCGCACAACCAACCCTTCAAAAGTTGAACAAATTGATCTATGAAGTTTTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CAA 90 bp | ATATGGTGGATGAGGCAAAACTTCATAGATCAATTTGTTCAACTTTaGAAGGGTTGGTTGTGCGACATGCAGTCGGGCATTGTAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: IWWMRQNFIDQFVQL*KGWLCDMQSGIVVA Trigger: AGCAACTACAATGCCCGACTGCATGTCGCACAACCAACCCTTCAAAAGTTGAACAAATTGATCTATGAAGTTTTGCCTCATCCACCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS TCA 72 bp | ACAAACTTTAGACCACCACAGGAACCTACAACTTCTTaGCTCTACCAACTTTTCATAGTCCCTTACCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: TNFRPPQEPTTS*LYQLFIVPYLL Trigger: TAGGAGGTAAGGGACTATGAAAAGTTGGTAGAGTCAAGAAGTTGTAGGTTCCTGTGGTGGTCTAAAGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649496.1 ENST00000667169.1 |
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| CDS CCA 72 bp | ATTTCAGTATCCTCATGGATCATCCAATCAATGCTCTaGTGTTTGGTTTCTATGACCTCTTCTCCAGTGATC | + |
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Preference number: 6 (lower is better) Translates to: ISVSSWIIQSML*CLVSMTSSPVI Trigger: GATCACTGGAGAAGAGGTCATAGAAACCAAACACCAGAGCATTGATTGGATGATCCATGAGGATACTGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649496.1 ENST00000667169.1 |
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| CDS CAA 72 bp | TCTTTCACAGGGCAGCTGGCAGAATGTTTCAGTTTCTaGCCATGTGATCCTCTTTATAGAACTGCTAATGAT | + |
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Preference number: 6 (lower is better) Translates to: SFTGQLAECFSF*PCDPLYRTAND Trigger: ATCATTAGCAGTTCTATAAAGAGGATCACATGGCAAGAAACTGAAACATTCTGCCAGCTGCCCTGTGAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649496.1 ENST00000655771.1 ENST00000667169.1 |
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| CDS CAA 72 bp | AGCTGCAGGTGTTGCACTTTTCAGTGCCTCATTGATTaGCTAAGCATACTTCTCAGATGTAATGGTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: SCRCCTFQCLID*LSILLRCNGFT Trigger: AGTGAAACCATTACATCTGAGAAGTATGCTTAGCAAATCAATGAGGCACTGAAAAGTGCAACACCTGCAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CAA 72 bp | AAACTTCATAGATCAATTTGTTCAACTTTTGAAGGGTaGGTTGTGCGACATGCAGTCGGGCATTGTAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: KLHRSICSTFEG*VVRHAVGHCSC Trigger: GCAACTACAATGCCCGACTGCATGTCGCACAACCAACCCTTCAAAAGTTGAACAAATTGATCTATGAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS CAA 72 bp | ATGAGGCAAAACTTCATAGATCAATTTGTTCAACTTTaGAAGGGTTGGTTGTGCGACATGCAGTCGGGCATT | + |
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Preference number: 6 (lower is better) Translates to: MRQNFIDQFVQL*KGWLCDMQSGI Trigger: AATGCCCGACTGCATGTCGCACAACCAACCCTTCAAAAGTTGAACAAATTGATCTATGAAGTTTTGCCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655771.1 ENST00000667169.1 |
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| CDS GCA 72 bp | CATAGTCCACCAACCTCCAAGCCTTTTCAAGATTGTTaGTTCTGGCTTTCTCCAACATCATTCTTGTTATAT | + |
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Preference number: 6 (lower is better) Translates to: HSPPTSKPFQDC*FWLSPTSFLLY Trigger: ATATAACAAGAATGATGTTGGAGAAAGCCAGAAGCAACAATCTTGAAAAGGCTTGGAGGTTGGTGGACTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649496.1 |
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| CDS GCA 72 bp | ACTTACCCACCAACCTCCAAGCCTTTTCAAGATTGTTaGTTCTGGCTTTCTCCAACATCATTCTTGTTATAT | + |
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Preference number: 6 (lower is better) Translates to: TYPPTSKPFQDC*FWLSPTSFLLY Trigger: ATATAACAAGAATGATGTTGGAGAAAGCCAGAAGCAACAATCTTGAAAAGGCTTGGAGGTTGGTGGGTAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667169.1 |
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| CDS CAA 72 bp | TACTTACCCACCAACCTCCAAGCCTTTTCAAGATTGTaGCTTCTGGCTTTCTCCAACATCATTCTTGTTATA | + |
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Preference number: 6 (lower is better) Translates to: YLPTNLQAFSRL*LLAFSNIILVI Trigger: TATAACAAGAATGATGTTGGAGAAAGCCAGAAGCAACAATCTTGAAAAGGCTTGGAGGTTGGTGGGTAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667169.1 |
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| CDS CAA 90 bp | GATTGTTGCTTCTGGCTTTCTCCAACATCATTCTTGTTATATTTTTaGGTGATTTCAGTATCCTCATGGATCATCCAATCAATGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: DCCFWLSPTSFLLYF*VISVSSWIIQSMLW Trigger: CCAGAGCATTGATTGGATGATCCATGAGGATACTGAAATCACCAAAAAATATAACAAGAATGATGTTGGAGAAAGCCAGAAGCAACAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000649496.1 ENST00000667169.1 |
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