RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC15 (Homo sapiens)

Ensembl gene IDs: ENSG00000149548

Ensembl transcript IDs: ENST00000344762.6, ENST00000524471.1, ENST00000529051.5, ENST00000530061.1

Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTATGTCCAGTGTCACTaGATGGGGAAAGAGGCAATA +
Preference number: 2 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRYVQCH*MGKEAI
Trigger: TATTGCCTCTTTCCCCATTCAGTGACACTGGACATA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
3UTR-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGATAATAGGCTCCGTATaGTTCACAAGACAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRIIGSV*FTRQKR
Trigger: TCTCTTCTGTCTTGTGAACCATACGGAGCCTATTAT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCACCGCCACTTTGCGGTaGGCTGCTCCGTCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSTATLR*AAPSRP
Trigger: TGGGCGGGACGGAGCAGCCCACCGCAAAGTGGCGGT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTATGGGAAGACGCGCTaGACGGCTGGGAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLYGKTR*TAGSLG
Trigger: CCCGAGGCTCCCAGCCGTTCAGCGCGTCTTCCCATA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTATGGGAAGACGCGCTaGACGGCTGGGAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSYGKTR*TAGSLG
Trigger: CCCGAGGCTCCCAGCCGTTCAGCGCGTCTTCCCATA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCCACTTTGCGGTGGGCTaGTCCGTCCCGCCCATCCGT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSHFAVG*SVPPIR
Trigger: ACGGATGGGCGGGACGGAGCAGCCCACCGCAAAGTG...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTCGGCTGAGATGGCACTaGCCAGGAATCGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLRLRWH*PGIGPQ
Trigger: CTGCGGGCCGATTCCTGGCCAGTGCCATCTCAGCCG...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAGTAGACCGCCACTTTaGGGTGGGCTGCTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLSRPPL*GGLLRP
Trigger: GGGACGGAGCAGCCCACCGCAAAGTGGCGGTCTACT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTCTGCTCCGGCTGAGATaGCACTGGCCAGGAATCGGC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLLLRLR*HWPGIG
Trigger: GCCGATTCCTGGCCAGTGCCATCTCAGCCGGAGCAG...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGGAGGCCTGCTCCGGCTaGGATGGCACTGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTREACSG*DGTGQE
Trigger: TTCCTGGCCAGTGCCATCTCAGCCGGAGCAGGCCTC...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTATAAAAGCCTGCTTCTaGGGCCCCGAGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLIKACF*GPEACS
Trigger: GGAGCAGGCCTCGGGGCCTCAGAAGCAGGCTTTTAT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCATAAAAGCCTGCTTCTaGGGCCCCGAGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSIKACF*GPEACS
Trigger: GGAGCAGGCCTCGGGGCCTCAGAAGCAGGCTTTTAT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCACTTCCCAGCATCTGTaGCTCCTGTGTCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSTSQHL*LLCLQP
Trigger: CGGCTGCAGACACAGGAGTCACAGATGCTGGGAAGT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTTCCGAACTACCTGGTaGGGCAGGTTCCACCCATGC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLFRTTW*GRFHPC
Trigger: GCATGGGTGGAACCTGCCTCACCAGGTAGTTCGGAA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTTCCGAACTACCTGGTaGGGCAGGTTCCACCCATGC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSFRTTW*GRFHPC
Trigger: GCATGGGTGGAACCTGCCTCACCAGGTAGTTCGGAA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGCTGCTCCGGCTGAGATaGCACTGGCCAGGAATCGGC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRLLRLR*HWPGIG
Trigger: GCCGATTCCTGGCCAGTGCCATCTCAGCCGGAGCAG...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCGAATGGATAGCCTGCTaGTCCTGCTGGCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSEWIAC*SCWPLP
Trigger: TGGGAGAGGCCAGCAGGACCAGCAGGCTATCCATTC...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCCCTCTCAGCCAGCACTaGCAACACGTCCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSPLSQH*QHVLAL
Trigger: AAGAGCAAGGACGTGTTGGCAGTGCTGGCTGAGAGG...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTCCTCTCAGCCAGCACTaGCAACACGTCCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLPLSQH*QHVLAL
Trigger: AAGAGCAAGGACGTGTTGGCAGTGCTGGCTGAGAGG...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGCAGGTTCCACCCATaGCCCAACTGGTACTATAGC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLGRFHP*PNWYYS
Trigger: GCTATAGTACCAGTTGGGGCATGGGTGGAACCTGCC...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCGGCAGGTTCCACCCATaGCCCAACTGGTACTATAGC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSGRFHP*PNWYYS
Trigger: GCTATAGTACCAGTTGGGGCATGGGTGGAACCTGCC...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTCAGAATGGATAGCCTaGTGGTCCTGCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLSEWIA*WSCWPL
Trigger: GAGAGGCCAGCAGGACCAGCAGGCTATCCATTCTGA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGCCTGCTGGTCCTGCTaGCCTCTCCCAAACAAATCT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLACWSC*PLPNKS
Trigger: AGATTTGTTTGGGAGAGGCCAGCAGGACCAGCAGGC...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTCTGGCTCAATGGCCTaGCCTTCTGGCTCAGTAACC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSSGSMA*PSGSVT
Trigger: GGTTACTGAGCCAGAAGGCCAGGCCATTGAGCCAGA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTCTGGCTCAATGGCCTaGCCTTCTGGCTCAGTAACC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLSGSMA*PSGSVT
Trigger: GGTTACTGAGCCAGAAGGCCAGGCCATTGAGCCAGA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAATAGGCTGGCCTTCTaGCTCAATGGCCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSNRLAF*LNGLAF
Trigger: GAAGGCCAGGCCATTGAGCCAGAAGGCCAGCCTATT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGACTTCCCAGCATCTGTaGCTCCTGTGTCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRTSQHL*LLCLQP
Trigger: CGGCTGCAGACACAGGAGTCACAGATGCTGGGAAGT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTGCGACTCGAAGAGTTaGATTACCCCCAGGGACATC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLCDSKS*ITPRDI
Trigger: GATGTCCCTGGGGGTAATTCAACTCTTCGAGTCGCA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCATAGCCTGCTGGTCCTaGTGGCCTCTCCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSIACWS*WPLPNK
Trigger: TTTGTTTGGGAGAGGCCAGCAGGACCAGCAGGCTAT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAGCCAGGGGCAACCTTaGGGTATTTCGAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSSQGQP*GISRFL
Trigger: AAGAAACCTCGAAATACCTCAAGGTTGCCCCTGGCT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAAGGATGCTAGCCGGTaGCGTGCCTGTTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSKDASR*RACFIV
Trigger: AACTATGAAACAGGCACGTCACCGGCTAGCATCCTT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAAGGATGCTAGCCGGTaGCGTGCCTGTTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLKDASR*RACFIV
Trigger: AACTATGAAACAGGCACGTCACCGGCTAGCATCCTT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTTATCCACGTCAGACTaGAATGCCAGTGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLLSTSD*NASGAW
Trigger: CCAAGCTCCACTGGCATTTCAGTCTGACGTGGATAA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCCTGCCAACACGTCCTTaGTCTTCAGGGGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSLPTRP*SSGGLK
Trigger: CTTTAAACCCCCTGAAGAGCAAGGACGTGTTGGCAG...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTCAGAATGGATAGCCTaGTGGTCCTGCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRSEWIA*WSCWPL
Trigger: GAGAGGCCAGCAGGACCAGCAGGCTATCCATTCTGA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAATCGGTATAGGTTATaGGAAGACGCGCTGAACGGC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLNRYRL*EDALNG
Trigger: GCCGTTCAGCGCGTCTTCCCATAACCTATACCGATT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTGGATGCTGGTTTCCTaGAAAGCACTTCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLWMLVS*KALPLW
Trigger: CCAGAGAGGAAGTGCTTTCCAGGAAACCAGCATCCA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGGCCTGCTGGTCCTGCTaGCCTCTCCCAAACAAATCT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRACWSC*PLPNKS
Trigger: AGATTTGTTTGGGAGAGGCCAGCAGGACCAGCAGGC...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAATGGCCTGGCCTTCTaGCTCAGTAACCTGAACCTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLNGLAF*LSNLNL
Trigger: AAGGTTCAGGTTACTGAGCCAGAAGGCCAGGCCATT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAATGGCCTGGCCTTCTaGCTCAGTAACCTGAACCTT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSNGLAF*LSNLNL
Trigger: AAGGTTCAGGTTACTGAGCCAGAAGGCCAGGCCATT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGAATAGGCTGGCCTTCTaGCTCAATGGCCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRNRLAF*LNGLAF
Trigger: GAAGGCCAGGCCATTGAGCCAGAAGGCCAGCCTATT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTCTGTCTTAATAGGCTaGCCTTCTGGCTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSSVLIG*PSGSMA
Trigger: GGCCATTGAGCCAGAAGGCCAGCCTATTAAGACAGA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTCTGTCTTAATAGGCTaGCCTTCTGGCTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLSVLIG*PSGSMA
Trigger: GGCCATTGAGCCAGAAGGCCAGCCTATTAAGACAGA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCCCTGGTCCTGGGATTTaGGAGGCAAACACTGATAGT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSPGPGI*EANTDS
Trigger: ACTATCAGTGTTTGCCTCCCAAATCCCAGGACCAGG...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTATGTCATCCTGGTCCTaGGATTTGGGAGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLMSSWS*DLGGKH
Trigger: GTGTTTGCCTCCCAAATCCCAGGACCAGGATGACAT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCATGTCATCCTGGTCCTaGGATTTGGGAGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSMSSWS*DLGGKH
Trigger: GTGTTTGCCTCCCAAATCCCAGGACCAGGATGACAT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCGCAGCTAAAAGACCTTaGTGGACCTTAATGGGCAAC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSAAKRP*WTLMGN
Trigger: GTTGCCCATTAAGGTCCATCAAGGTCTTTTAGCTGC...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGCACAGGTATCAGGATaGGCATCCCAAAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLAQVSG*ASQKSG
Trigger: TCCTGATTTTTGGGATGCTCATCCTGATACCTGTGC...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTGCGACTCGAAGAGTTaGATTACCCCCAGGGACATC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRCDSKS*ITPRDI
Trigger: GATGTCCCTGGGGGTAATTCAACTCTTCGAGTCGCA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTGTGTTGCTGAAGACTaGATGGCTATGGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSCVAED*MAMEPS
Trigger: AGAAGGCTCCATAGCCATGCAGTCTTCAGCAACACA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGATAGCCTGCTGGTCCTaGTGGCCTCTCCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRIACWS*WPLPNK
Trigger: TTTGTTTGGGAGAGGCCAGCAGGACCAGCAGGCTAT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTCACGTCAGACTGAAATaGCAGTGGAGCTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLHVRLK*QWSLEF
Trigger: GAATTCCAAGCTCCACTGGCATTTCAGTCTGACGTG...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGCACCCATGCCCCAACTaGTACTATAGCCTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRHPCPN*YYSLVP
Trigger: AGGAACGAGGCTATAGTACCAGTTGGGGCATGGGTG...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTATCCCAGTGGATGCTaGTTTCCTGGAAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSYPSGC*FPGKHF
Trigger: GAAGTGCTTTCCAGGAAACCAGCATCCACTGGGATA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTATCCCAGTGGATGCTaGTTTCCTGGAAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLYPSGC*FPGKHF
Trigger: GAAGTGCTTTCCAGGAAACCAGCATCCACTGGGATA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCATAATCCTGGGCTTCTaGCAGAATATCCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSIILGF*QNILKA
Trigger: GGCCTTCAGGATATTCTGCCAGAAGCCCAGGATTAT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAACAGCCTGGGTATCTaGCTTAACACTCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSNSLGI*LNTLDS
Trigger: GGAATCCAGAGTGTTAAGCCAGATACCCAGGCTGTT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTTTTTGATGTCATCCTaGTCCTGGGATTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLFLMSS*SWDLGG
Trigger: GCCTCCCAAATCCCAGGACCAGGATGACATCAAAAA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGAGCCAGGGGCAACCTTaGGGTATTTCGAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRSQGQP*GISRFL
Trigger: AAGAAACCTCGAAATACCTCAAGGTTGCCCCTGGCT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTTATCCACGTCAGACTaGAATGCCAGTGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRLSTSD*NASGAW
Trigger: CCAAGCTCCACTGGCATTTCAGTCTGACGTGGATAA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCCTCAAAGACTTCACATaGGCTCTTCTGATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSLKDFT*ALLIRA
Trigger: TGCTCTGATCAGAAGAGCTCATGTGAAGTCTTTGAG...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTATGTCCAGTGTCACTaGATGGGGAAAGAGGCAATA +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLYVQCH*MGKEAI
Trigger: TATTGCCTCTTTCCCCATTCAGTGACACTGGACATA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTATTTATCCCAGTGGATaGTGGTTTCCTGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLIYPSG*WFPGKH
Trigger: GTGCTTTCCAGGAAACCAGCATCCACTGGGATAAAT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTCGTTGGAGAGAACATaGAGGTCTCTGGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLSLERT*RSLGRK
Trigger: TTTTCTACCCAGAGACCTGCATGTTCTCTCCAACGA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAAGACTGCATGGCTATaGAGCCTTCTTTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSKTAWL*SLLFVL
Trigger: GAGCACAAAAAGAAGGCTCCATAGCCATGCAGTCTT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAAGACTGCATGGCTATaGAGCCTTCTTTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLKTAWL*SLLFVL
Trigger: GAGCACAAAAAGAAGGCTCCATAGCCATGCAGTCTT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTGGATGCTGGTTTCCTaGAAAGCACTTCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRWMLVS*KALPLW
Trigger: CCAGAGAGGAAGTGCTTTCCAGGAAACCAGCATCCA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTTCTTATCTTCAGAATaGATAGCCTGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLFLSSE*IACWSC
Trigger: GCAGGACCAGCAGGCTATCCATTCTGAAGATAAGAA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTTCTTATCTTCAGAATaGATAGCCTGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSFLSSE*IACWSC
Trigger: GCAGGACCAGCAGGCTATCCATTCTGAAGATAAGAA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTCTGGCTTAACACTCTaGATTCCTGTCAAATCACCC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLSGLTL*IPVKSP
Trigger: GGGTGATTTGACAGGAATCCAGAGTGTTAAGCCAGA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGCCTGGTCCTGGGATTTaGGAGGCAAACACTGATAGT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRPGPGI*EANTDS
Trigger: ACTATCAGTGTTTGCCTCCCAAATCCCAGGACCAGG...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTCTCTAGGGGAGTCTTaGTCCTGGATTTTAGGTACA +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLSLGES*SWILGT
Trigger: TGTACCTAAAATCCAGGACCAAGACTCCCCTAGAGA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAATGCCAGTGGAGCTTaGAATTCAGTGCTCAATCCT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSNASGA*NSVLNP
Trigger: AGGATTGAGCACTGAATTCCAAGCTCCACTGGCATT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAATGCCAGTGGAGCTTaGAATTCAGTGCTCAATCCT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLNASGA*NSVLNP
Trigger: AGGATTGAGCACTGAATTCCAAGCTCCACTGGCATT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAGACTGAAATGCCAGTaGAGCTTGGAATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLRLKCQ*SLEFSA
Trigger: AGCACTGAATTCCAAGCTCCACTGGCATTTCAGTCT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAGACTGAAATGCCAGTaGAGCTTGGAATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSRLKCQ*SLEFSA
Trigger: AGCACTGAATTCCAAGCTCCACTGGCATTTCAGTCT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAGCTGCATTTTCTCCTaGATTTGGGCTCGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSSCIFS*IWARKA
Trigger: AGCTTTACGAGCCCAAATCCAGGAGAAAATGCAGCT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGGCAGCTAAAAGACCTTaGTGGACCTTAATGGGCAAC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRAAKRP*WTLMGN
Trigger: GTTGCCCATTAAGGTCCATCAAGGTCTTTTAGCTGC...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTTCGTTAGAAGAGCCTaGTTTGTGGGTAGAAAATCC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSFVRRA*FVGRKS
Trigger: GGATTTTCTACCCACAAATCAGGCTCTTCTAACGAA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTTCGTTAGAAGAGCCTaGTTTGTGGGTAGAAAATCC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLFVRRA*FVGRKS
Trigger: GGATTTTCTACCCACAAATCAGGCTCTTCTAACGAA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAGGAAGTCCTGGTCCTaGTATTTGAGTAGAATACTC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLRKSWS*YLSRIL
Trigger: GAGTATTCTACTCAAATATCAGGACCAGGACTTCCT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAGGAAGTCCTGGTCCTaGTATTTGAGTAGAATACTC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSRKSWS*YLSRIL
Trigger: GAGTATTCTACTCAAATATCAGGACCAGGACTTCCT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAAAGATGCAGGTTGCTaGTTTTTGATGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSKDAGC*FLMSSW
Trigger: CCAGGATGACATCAAAAATCAGCAACCTGCATCTTT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGAGGGTAGTTTGATATaGTTGTTCTGTTCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLEGSLI*LFCSLG
Trigger: CCCTAGAGAACAGAACAAGCATATCAAACTACCCTC...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGCACGTCAGACTGAAATaGCAGTGGAGCTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRHVRLK*QWSLEF
Trigger: GAATTCCAAGCTCCACTGGCATTTCAGTCTGACGTG...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTTGCTGAAGACTGCATaGCTATGGAGCCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLLLKTA*LWSLLF
Trigger: AAAAAGAAGGCTCCATAGCCATGCAGTCTTCAGCAA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTCTGTATTTATCCCAGTaGATGCTGGTTTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLLYLSQ*MLVSWK
Trigger: TTTCCAGGAAACCAGCATCCACTGGGATAAATACAG...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGCCTGTCAAATCACCCTaGGTTTCCAGCAAATCACCT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRPVKSP*VSSKSP
Trigger: AGGTGATTTGCTGGAAACCCAGGGTGATTTGACAGG...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTTCATTTCAACAGCCTaGGTATCTGGCTTAACACTC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSFISTA*VSGLTL
Trigger: GAGTGTTAAGCCAGATACCCAGGCTGTTGAAATGAA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTTTTTGATGTCATCCTaGTCCTGGGATTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRFLMSS*SWDLGG
Trigger: GCCTCCCAAATCCCAGGACCAGGATGACATCAAAAA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCGGGGAGTCTTGGTCCTaGATTTTAGGTACAACATAT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSGESWS*ILGTTY
Trigger: ATATGTTGTACCTAAAATCCAGGACCAAGACTCCCC...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTTCAGCATAATACCCTaGGTTTCTGTCTTAATAGGC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLFSIIP*VSVLIG
Trigger: GCCTATTAAGACAGAAACTCAGGGTATTATGCTGAA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTTCAGCATAATACCCTaGGTTTCTGTCTTAATAGGC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSFSIIP*VSVLIG
Trigger: GCCTATTAAGACAGAAACTCAGGGTATTATGCTGAA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGAACACAGTGGTCTTTaGGTAAAACATCCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLEHSGL*VKHPGF
Trigger: AAAACCAGGATGTTTTACTCAAAGACCACTGTGTTC...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAAGATGAGGGTAGTTTaGTATGCTTGTTCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSKMRVV*YACSVL
Trigger: GAGAACAGAACAAGCATATCAAACTACCCTCATCTT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTTCAGTGCTCAATCCTaGTTGATACCTATCATAAGC +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLFSAQS*LIPIIS
Trigger: GCTTATGATAGGTATCAATCAGGATTGAGCACTGAA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTTCAGTGCTCAATCCTaGTTGATACCTATCATAAGC +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSFSAQS*LIPIIS
Trigger: GCTTATGATAGGTATCAATCAGGATTGAGCACTGAA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGCAGAAGCAAAATTATaGATTGCGACTCGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLAEAKL*IATRRV
Trigger: AACTCTTCGAGTCGCAATTCATAATTTTGCTTCTGC...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCGCAGAAGCAAAATTATaGATTGCGACTCGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSAEAKL*IATRRV
Trigger: AACTCTTCGAGTCGCAATTCATAATTTTGCTTCTGC...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGCTCAAAGACTTCACATaGGCTCTTCTGATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRLKDFT*ALLIRA
Trigger: TGCTCTGATCAGAAGAGCTCATGTGAAGTCTTTGAG...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGAGCCTTCTTTTTGTaGTCTTTCATAAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLGAFFL*SFIRLL
Trigger: CAGAAGTCTTATGAAAGAGCACAAAAAGAAGGCTCC...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCCAAACACTGATAGTCTaGCAGAGAAAAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSQTLIV*QRKVFS
Trigger: AGAGAAGACTTTTCTCTGGCAGACTATCAGTGTTTG...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTCAAAGTCCGCCTGTGTaGAGAAGCAAAATTATGAAT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLQSPPV*RSKIMN
Trigger: ATTCATAATTTTGCTTCTGCACACAGGCGGACTTTG...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGTTTCACTAAGAGCCTaGGCTTGTTGTTGGAATAAT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLVSLRA*ACCWNN
Trigger: ATTATTCCAACAACAAGCCCAGGCTCTTAGTGAAAC...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTCTGGCTTAACACTCTaGATTCCTGTCAAATCACCC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRSGLTL*IPVKSP
Trigger: GGGTGATTTGACAGGAATCCAGAGTGTTAAGCCAGA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTTGAGTAGAATACTCTaGTCTTTAGGGAGAACACAG +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSLSRIL*SLGRTQ
Trigger: CTGTGTTCTCCCTAAAGACCAGAGTATTCTACTCAA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTATTTTCTCCTGGATTTaGGCTCGTAAAGCTTCTACA +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLIFSWI*ARKAST
Trigger: TGTAGAAGCTTTACGAGCCCAAATCCAGGAGAAAAT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGAGCTGCATTTTCTCCTaGATTTGGGCTCGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRSCIFS*IWARKA
Trigger: AGCTTTACGAGCCCAAATCCAGGAGAAAATGCAGCT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAGAAAATACAGTTGTTaGCACAGGTATCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSRKYSC*HRYQDE
Trigger: CTCATCCTGATACCTGTGCCAACAACTGTATTTTCT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTCTTTCTGAACTCTGCTaGAAGGTTTGTTCTTATCTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLLSELC*KVCSYL
Trigger: AAGATAAGAACAAACCTTTCAGCAGAGTTCAGAAAG...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCCTTTCTGAACTCTGCTaGAAGGTTTGTTCTTATCTT +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSLSELC*KVCSYL
Trigger: AAGATAAGAACAAACCTTTCAGCAGAGTTCAGAAAG...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGAAAGATGCAGGTTGCTaGTTTTTGATGTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRKDAGC*FLMSSW
Trigger: CCAGGATGACATCAAAAATCAGCAACCTGCATCTTT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTACTCAACTTCTCTCCTaGATATGGATCTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLTQLLS*IWIFMK
Trigger: TTTCATGAAGATCCATATTCAGGAGAGAAGTTGAGT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCACTCAACTTCTCTCCTaGATATGGATCTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSTQLLS*IWIFMK
Trigger: TTTCATGAAGATCCATATTCAGGAGAGAAGTTGAGT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGGAGGGTAGTTTGATATaGTTGTTCTGTTCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTREGSLI*LFCSLG
Trigger: CCCTAGAGAACAGAACAAGCATATCAAACTACCCTC...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAGGAGTATTTCCTCTTaGAATCTCCCATTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSRSISS*NLPFLK
Trigger: TTTGAGAAATGGGAGATTGCAAGAGGAAATACTCCT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGGAGCTTGGAATTCAGTaGTCAATCCTGATTGATACC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRELGIQ*SILIDT
Trigger: GGTATCAATCAGGATTGAGCACTGAATTCCAAGCTC...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTTGCTGAAGACTGCATaGCTATGGAGCCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRLLKTA*LWSLLF
Trigger: AAAAAGAAGGCTCCATAGCCATGCAGTCTTCAGCAA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAAACACTTGTCCTTTTaGAAGTTAAGTGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLKHLSF*KLSVLL
Trigger: CAGCAACACACTTAACTTCCAAAAGGACAAGTGTTT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAAACACTTGTCCTTTTaGAAGTTAAGTGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSKHLSF*KLSVLL
Trigger: CAGCAACACACTTAACTTCCAAAAGGACAAGTGTTT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGCTGTATTTATCCCAGTaGATGCTGGTTTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRLYLSQ*MLVSWK
Trigger: TTTCCAGGAAACCAGCATCCACTGGGATAAATACAG...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTTCATTTCAACAGCCTaGGTATCTGGCTTAACACTC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRFISTA*VSGLTL
Trigger: GAGTGTTAAGCCAGATACCCAGGCTGTTGAAATGAA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTCTAGCTCAATACTCTaGGCTTTCAGCATAATACCC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRSSSIL*AFSIIP
Trigger: GGGTATTATGCTGAAAGCCCAGAGTATTGAGCTAGA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGGAAGAGCCTGATTTGTaGGTAGAAAATCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTREEPDL*VENPGF
Trigger: AAACCCAGGATTTTCTACCCACAAATCAGGCTCTTC...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGGAACACAGTGGTCTTTaGGTAAAACATCCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTREHSGL*VKHPGF
Trigger: AAAACCAGGATGTTTTACTCAAAGACCACTGTGTTC...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR TCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGAAGATGAGGGTAGTTTaGTATGCTTGTTCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRKMRVV*YACSVL
Trigger: GAGAACAGAACAAGCATATCAAACTACCCTCATCTT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGGGAGCCTTCTTTTTGTaGTCTTTCATAAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRGAFFL*SFIRLL
Trigger: CAGAAGTCTTATGAAAGAGCACAAAAAGAAGGCTCC...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGCAAACACTGATAGTCTaGCAGAGAAAAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRQTLIV*QRKVFS
Trigger: AGAGAAGACTTTTCTCTGGCAGACTATCAGTGTTTG...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGGTTTCACTAAGAGCCTaGGCTTGTTGTTGGAATAAT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRVSLRA*ACCWNN
Trigger: ATTATTCCAACAACAAGCCCAGGCTCTTAGTGAAAC...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTTGAGTAGAATACTCTaGTCTTTAGGGAGAACACAG +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRLSRIL*SLGRTQ
Trigger: CTGTGTTCTCCCTAAAGACCAGAGTATTCTACTCAA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTGTCATATCAGAGTATaGCTCCTTAAAGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLCHIRV*LLKVYF
Trigger: AAAGTACACTTTAAGGAGCCATACTCTGATATGACA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGATTTTCTCCTGGATTTaGGCTCGTAAAGCTTCTACA +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRIFSWI*ARKAST
Trigger: TGTAGAAGCTTTACGAGCCCAAATCCAGGAGAAAAT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGAGAAAATACAGTTGTTaGCACAGGTATCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRRKYSC*HRYQDE
Trigger: CTCATCCTGATACCTGTGCCAACAACTGTATTTTCT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR GCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGAGGAGTATTTCCTCTTaGAATCTCCCATTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRRSISS*NLPFLK
Trigger: TTTGAGAAATGGGAGATTGCAAGAGGAAATACTCCT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CCA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTGTCATATCAGAGTATaGCTCCTTAAAGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRCHIRV*LLKVYF
Trigger: AAAGTACACTTTAAGGAGCCATACTCTGATATGACA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CCA 90 bp AGCCTGCTTCTGAGGCCCCGAGGCCTGCTCCGGCTGAGATGGCACTaGCCAGGAATCGGCCCGCAGCTCGCCACAGACTCAGTCTACTCG +
Preference number: 5 (lower is better)
Translates to: SLLLRPRGLLRLRWH*PGIGPQLATDSVYS
Trigger: CGAGTAGACTGAGTCTGTGGCGAGCTGCGGGCCGATTCCTGGCCAGTGCCATCTCAGCCGGAGCAGGCCTCGGGGCCTCAGAAGCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529051.5
CDS CCA 90 bp GATAAAAGCCTGCTTCTGAGGCCCCGAGGCCTGCTCCGGCTGAGATaGCACTGGCCAGGAATCGGCCCGCAGCTCGCCACAGACTCAGTC +
Preference number: 5 (lower is better)
Translates to: DKSLLLRPRGLLRLR*HWPGIGPQLATDSV
Trigger: GACTGAGTCTGTGGCGAGCTGCGGGCCGATTCCTGGCCAGTGCCATCTCAGCCGGAGCAGGCCTCGGGGCCTCAGAAGCAGGCTTTTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS TCA 90 bp CAGCCGAGAGTCCCAATAATCGGTATAGGTTATGGGAAGACGCGCTaGACGGCTGGGAGCCTCGGGCCAGATAAAAGCCTGCTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: QPRVPIIGIGYGKTR*TAGSLGPDKSLLLR
Trigger: CCTCAGAAGCAGGCTTTTATCTGGCCCGAGGCTCCCAGCCGTTCAGCGCGTCTTCCCATAACCTATACCGATTATTGGGACTCTCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS TCA 90 bp CTCCCTTCTTCTAGCTCAATACTCTGGGCTTTCAGCATAATACCCTaGGTTTCTGTCTTAATAGGCTGGCCTTCTGGCTCAATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LPSSSSILWAFSIIP*VSVLIGWPSGSMAW
Trigger: CCAGGCCATTGAGCCAGAAGGCCAGCCTATTAAGACAGAAACTCAGGGTATTATGCTGAAAGCCCAGAGTATTGAGCTAGAAGAAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS GCA 90 bp GATGTCATCCTGGTCCTGGGATTTGGGAGGCAAACACTGATAGTCTaGCAGAGAAAAGTCTTCTCTCCCTTTCTCATCTGTCATATCAGA +
Preference number: 5 (lower is better)
Translates to: DVILVLGFGRQTLIV*QRKVFSPFLICHIR
Trigger: TCTGATATGACAGATGAGAAAGGGAGAGAAGACTTTTCTCTGGCAGACTATCAGTGTTTGCCTCCCAAATCCCAGGACCAGGATGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS GCA 90 bp CTTTATCCACGTCAGACTGAAATGCCAGTGGAGCTTGGAATTCAGTaGTCAATCCTGATTGATACCTATCATAAGCCAAGGGCACTCCAG +
Preference number: 5 (lower is better)
Translates to: LYPRQTEMPVELGIQ*SILIDTYHKPRALQ
Trigger: CTGGAGTGCCCTTGGCTTATGATAGGTATCAATCAGGATTGAGCACTGAATTCCAAGCTCCACTGGCATTTCAGTCTGACGTGGATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAAGCCAGGGGCAACCTaGAGGTATTTCGAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLKPGAT*RYFEVS
Trigger: AGAAACCTCGAAATACCTCAAGGTTGCCCCTGGCTT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAAGCCAGGGGCAACCTaGAGGTATTTCGAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSKPGAT*RYFEVS
Trigger: AGAAACCTCGAAATACCTCAAGGTTGCCCCTGGCTT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCACTGCCAACACGTCCTaGCTCTTCAGGGGGTTTAAA +
Preference number: 5 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSTANTS*LFRGFK
Trigger: TTTAAACCCCCTGAAGAGCAAGGACGTGTTGGCAGT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTTGCGACTCGAAGAGTaGAATTACCCCCAGGGACAT +
Preference number: 5 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSLRLEE*NYPQGH
Trigger: ATGTCCCTGGGGGTAATTCAACTCTTCGAGTCGCAA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTTCTCTAGGGGAGTCTaGGTCCTGGATTTTAGGTAC +
Preference number: 5 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSFSRGV*VLDFRY
Trigger: GTACCTAAAATCCAGGACCAAGACTCCCCTAGAGAA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTTCTCTAGGGGAGTCTaGGTCCTGGATTTTAGGTAC +
Preference number: 5 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLFSRGV*VLDFRY
Trigger: GTACCTAAAATCCAGGACCAAGACTCCCCTAGAGAA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAAATGCCAGTGGAGCTaGGAATTCAGTGCTCAATCC +
Preference number: 5 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLKCQWS*EFSAQS
Trigger: GGATTGAGCACTGAATTCCAAGCTCCACTGGCATTT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS GCA 90 bp CTTAATGGGCAACTCTCCTCTTATTCCTGTATTTATCCCAGTGGATaGTGGTTTCCTGGAAAGCACTTCCTCTCTGGTAAGAAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LNGQLSSYSCIYPSG*WFPGKHFLSGKKAF
Trigger: AAAAGCTTTCTTACCAGAGAGGAAGTGCTTTCCAGGAAACCAGCATCCACTGGGATAAATACAGGAATAAGAGGAGAGTTGCCCATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTGGAAGTTAAGTGTGTaGCTGAAGACTGCATGGCTA +
Preference number: 5 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSWKLSV*LKTAWL
Trigger: TAGCCATGCAGTCTTCAGCAACACACTTAACTTCCA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTTAGAAGAGCCTGATTaGTGGGTAGAAAATCCTGGG +
Preference number: 5 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSLEEPD*WVENPG
Trigger: CCCAGGATTTTCTACCCACAAATCAGGCTCTTCTAA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCGGTAGTTTGATATGCTaGTTCTGTTCTCTAGGGGAG +
Preference number: 5 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSGSLIC*FCSLGE
Trigger: CTCCCCTAGAGAACAGAACAAGCATATCAAACTACC...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGGACATCACAGGAATaGATGAATGAATGTAGTGCC +
Preference number: 5 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLGTSQE*MNECSA
Trigger: GGCACTACATTCATTCATCAATTCCTGTGATGTCCC...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTTGCGACTCGAAGAGTaGAATTACCCCCAGGGACAT +
Preference number: 5 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRLRLEE*NYPQGH
Trigger: ATGTCCCTGGGGGTAATTCAACTCTTCGAGTCGCAA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGAAATGCCAGTGGAGCTaGGAATTCAGTGCTCAATCC +
Preference number: 5 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRKCQWS*EFSAQS
Trigger: GGATTGAGCACTGAATTCCAAGCTCCACTGGCATTT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTCTCAGGTACTGCTTTaGACGCTCTTTCTTATCTTC +
Preference number: 5 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSSQVLL*TLFLIF
Trigger: GAAGATAAGAAAGAGCGTCAAAAGCAGTACCTGAGA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAGTCAGCTTTCAATCTaGGTTCCCAGACAGAGATTA +
Preference number: 5 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLSQLSI*VPRQRL
Trigger: TAATCTCTGTCTGGGAACCAAGATTGAAAGCTGACT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS GCA 90 bp TCAGGACCACAACAGCATAGTGGAGGTAAAGTAATATTATACAGCTaGATTTTCTCCTGGATTTGGGCTCGTAAAGCTTCTACATATCTC +
Preference number: 5 (lower is better)
Translates to: SGPQQHSGGKVILYS*IFSWIWARKASTYL
Trigger: GAGATATGTAGAAGCTTTACGAGCCCAAATCCAGGAGAAAATGCAGCTGTATAATATTACTTTACCTCCACTATGCTGTTGTGGTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344762.6
ENST00000524471.1
ENST00000530061.1
CDS GCA 90 bp TCAGGACCACAACAGCATAGTGGAGGTAAAGTAATATTATACAGCTaGATTTTCTCCTGGATTTGGGCTCGTAAAGCTTCTACATATCTG +
Preference number: 5 (lower is better)
Translates to: SGPQQHSGGKVILYS*IFSWIWARKASTYL
Trigger: CAGATATGTAGAAGCTTTACGAGCCCAAATCCAGGAGAAAATGCAGCTGTATAATATTACTTTACCTCCACTATGCTGTTGTGGTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529051.5
CDS-3UTR CAA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTGGAAGTTAAGTGTGTaGCTGAAGACTGCATGGCTA +
Preference number: 5 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRWKLSV*LKTAWL
Trigger: TAGCCATGCAGTCTTCAGCAACACACTTAACTTCCA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTTAGAAGAGCCTGATTaGTGGGTAGAAAATCCTGGG +
Preference number: 5 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRLEEPD*WVENPG
Trigger: CCCAGGATTTTCTACCCACAAATCAGGCTCTTCTAA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAGAACACAGTGGTCTTaGAGTAAAACATCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLRTQWS*SKTSWF
Trigger: AAACCAGGATGTTTTACTCAAAGACCACTGTGTTCT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGGGGACATCACAGGAATaGATGAATGAATGTAGTGCC +
Preference number: 5 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRGTSQE*MNECSA
Trigger: GGCACTACATTCATTCATCAATTCCTGTGATGTCCC...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCTATGGAGCCTTCTTTTaGTGCTCTTTCATAAGACTT +
Preference number: 5 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSYGAFF*CSFIRL
Trigger: AAGTCTTATGAAAGAGCACAAAAAGAAGGCTCCATA...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTCATAAAAGATGCAGGTaGCTGATTTTTGATGTCATC +
Preference number: 5 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLHKRCR*LIFDVI
Trigger: GATGACATCAAAAATCAGCAACCTGCATCTTTTATG...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTTTTAGGTACAACATATaGATGATAGTCCAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLFRYNI*MIVQRQ
Trigger: TTGCCTCTGGACTATCATCAATATGTTGTACCTAAA...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp AGGCTCCGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTAAAGATGAGGGTAGTTaGATATGCTTGTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: RLRMVHKTEERSKSAFNLKDEGS*ICLFCS
Trigger: AGAACAGAACAAGCATATCAAACTACCCTCATCTTT...AAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACGGAGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp CGTATGGTTCACAAGACAGAAGAGAGAAGTAAGTCAGCTTTCAATCTTGGTTCCAAAGATGAGGGTAGTTaGATATGCTTGTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: RMVHKTEERSKSAFNLGSKDEGS*ICLFCS
Trigger: AGAACAGAACAAGCATATCAAACTACCCTCATCTTT...GGAACCAAGATTGAAAGCTGACTTACTTCTCTCTTCTGTCTTGTGAACCATACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTCTCAGGTACTGCTTTaGACGCTCTTTCTTATCTTC +
Preference number: 5 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRSQVLL*TLFLIF
Trigger: GAAGATAAGAAAGAGCGTCAAAAGCAGTACCTGAGA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGAGTCAGCTTTCAATCTaGGTTCCCAGACAGAGATTA +
Preference number: 5 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRSQLSI*VPRQRL
Trigger: TAATCTCTGTCTGGGAACCAAGATTGAAAGCTGACT...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CCA 90 bp CAGCATAGTGGAGGTAAAGTAATATTATACAGCTGCATTTTCTCCTaGATTTGGGCTCGTAAAGCTTCTACATATCTCAGGTATTCTTTT +
Preference number: 5 (lower is better)
Translates to: QHSGGKVILYSCIFS*IWARKASTYLRYSF
Trigger: AAAAGAATACCTGAGATATGTAGAAGCTTTACGAGCCCAAATCCAGGAGAAAATGCAGCTGTATAATATTACTTTACCTCCACTATGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344762.6
ENST00000524471.1
ENST00000530061.1
CDS-3UTR CAA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGTATGGAGCCTTCTTTTaGTGCTCTTTCATAAGACTT +
Preference number: 5 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRYGAFF*CSFIRL
Trigger: AAGTCTTATGAAAGAGCACAAAAAGAAGGCTCCATA...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS-3UTR CAA 90 bp ACCAACTATGGCAATTTTTATTTCATTTGCCCTGTAGCCATGTCATATACCAGGCATAAAAGATGCAGGTaGCTGATTTTTGATGTCATC +
Preference number: 5 (lower is better)
Translates to: TNYGNFYFICPVAMSYTRHKRCR*LIFDVI
Trigger: GATGACATCAAAAATCAGCAACCTGCATCTTTTATG...CCTGGTATATGACATGGCTACAGGGCAAATGAAATAAAAATTGCCATAGTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CCA 72 bp CTGAGGCCCCGAGGCCTGCTCCGGCTGAGATGGCACTaGCCAGGAATCGGCCCGCAGCTCGCCACAGACTCA +
Preference number: 6 (lower is better)
Translates to: LRPRGLLRLRWH*PGIGPQLATDS
Trigger: TGAGTCTGTGGCGAGCTGCGGGCCGATTCCTGGCCAGTGCCATCTCAGCCGGAGCAGGCCTCGGGGCCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CCA 72 bp CTGCTTCTGAGGCCCCGAGGCCTGCTCCGGCTGAGATaGCACTGGCCAGGAATCGGCCCGCAGCTCGCCACA +
Preference number: 6 (lower is better)
Translates to: LLLRPRGLLRLR*HWPGIGPQLAT
Trigger: TGTGGCGAGCTGCGGGCCGATTCCTGGCCAGTGCCATCTCAGCCGGAGCAGGCCTCGGGGCCTCAGAAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CCA 72 bp TCTGCAGCCGAGAGTCCCAATAATCGGTATAGGTTATaGGAAGACGCGCTGAACGGCTGGGAGCCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: SAAESPNNRYRL*EDALNGWEPRA
Trigger: GGCCCGAGGCTCCCAGCCGTTCAGCGCGTCTTCCCATAACCTATACCGATTATTGGGACTCTCGGCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS GCA 72 bp CCTCGTTCCTCTCAGCCAGCACTGCCAACACGTCCTTaGTCTTCAGGGGGTTTAAAGCCAGGGGCAACCTTG +
Preference number: 6 (lower is better)
Translates to: PRSSQPALPTRP*SSGGLKPGATL
Trigger: CAAGGTTGCCCCTGGCTTTAAACCCCCTGAAGAGCAAGGACGTGTTGGCAGTGCTGGCTGAGAGGAACGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CAA 72 bp GCCTCGTTCCTCTCAGCCAGCACTGCCAACACGTCCTaGCTCTTCAGGGGGTTTAAAGCCAGGGGCAACCTT +
Preference number: 6 (lower is better)
Translates to: ASFLSASTANTS*LFRGFKARGNL
Trigger: AAGGTTGCCCCTGGCTTTAAACCCCCTGAAGAGCAAGGACGTGTTGGCAGTGCTGGCTGAGAGGAACGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS TCA 72 bp GTCCCAATAATCGGTATAGGTTATGGGAAGACGCGCTaGACGGCTGGGAGCCTCGGGCCAGATAAAAGCCTG +
Preference number: 6 (lower is better)
Translates to: VPIIGIGYGKTR*TAGSLGPDKSL
Trigger: CAGGCTTTTATCTGGCCCGAGGCTCCCAGCCGTTCAGCGCGTCTTCCCATAACCTATACCGATTATTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CAA 90 bp GGTACTATAGCCTCGTTCCTCTCAGCCAGCACTGCCAACACGTCCTaGCTCTTCAGGGGGTTTAAAGCCAGGGGCAACCTTGAGGTATTT +
Preference number: 6 (lower is better)
Translates to: GTIASFLSASTANTS*LFRGFKARGNLEVF
Trigger: AAATACCTCAAGGTTGCCCCTGGCTTTAAACCCCCTGAAGAGCAAGGACGTGTTGGCAGTGCTGGCTGAGAGGAACGAGGCTATAGTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS GCA 72 bp CTGGTCCTGGGATTTGGGAGGCAAACACTGATAGTCTaGCAGAGAAAAGTCTTCTCTCCCTTTCTCATCTGT +
Preference number: 6 (lower is better)
Translates to: LVLGFGRQTLIV*QRKVFSPFLIC
Trigger: ACAGATGAGAAAGGGAGAGAAGACTTTTCTCTGGCAGACTATCAGTGTTTGCCTCCCAAATCCCAGGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS TCA 72 bp AAATGCCAGTGGAGCTTGGAATTCAGTGCTCAATCCTaGTTGATACCTATCATAAGCCAAGGGCACTCCAGG +
Preference number: 6 (lower is better)
Translates to: KCQWSLEFSAQS*LIPIISQGHSR
Trigger: CCTGGAGTGCCCTTGGCTTATGATAGGTATCAATCAGGATTGAGCACTGAATTCCAAGCTCCACTGGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS TCA 72 bp TCTAGCTCAATACTCTGGGCTTTCAGCATAATACCCTaGGTTTCTGTCTTAATAGGCTGGCCTTCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: SSSILWAFSIIP*VSVLIGWPSGS
Trigger: TGAGCCAGAAGGCCAGCCTATTAAGACAGAAACTCAGGGTATTATGCTGAAAGCCCAGAGTATTGAGCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS GCA 72 bp CGTCAGACTGAAATGCCAGTGGAGCTTGGAATTCAGTaGTCAATCCTGATTGATACCTATCATAAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: RQTEMPVELGIQ*SILIDTYHKPR
Trigger: CCTTGGCTTATGATAGGTATCAATCAGGATTGAGCACTGAATTCCAAGCTCCACTGGCATTTCAGTCTGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CCA 72 bp TTCATTTCAACAGCCTGGGTATCTGGCTTAACACTCTaGATTCCTGTCAAATCACCCTGGGTTTCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: FISTAWVSGLTL*IPVKSPWVSSK
Trigger: TTTGCTGGAAACCCAGGGTGATTTGACAGGAATCCAGAGTGTTAAGCCAGATACCCAGGCTGTTGAAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CCA 72 bp AGTAACCTGAACCTTCATTTCAACAGCCTGGGTATCTaGCTTAACACTCTGGATTCCTGTCAAATCACCCTG +
Preference number: 6 (lower is better)
Translates to: SNLNLHFNSLGI*LNTLDSCQITL
Trigger: CAGGGTGATTTGACAGGAATCCAGAGTGTTAAGCCAGATACCCAGGCTGTTGAAATGAAGGTTCAGGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CCA 72 bp AAAGGTTTGTTCTTATCTTCAGAATGGATAGCCTGCTaGTCCTGCTGGCCTCTCCCAAACAAATCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: KGLFLSSEWIAC*SCWPLPNKSSF
Trigger: GAAAGAAGATTTGTTTGGGAGAGGCCAGCAGGACCAGCAGGCTATCCATTCTGAAGATAAGAACAAACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CAA 90 bp ATTGCGACTCGAAGAGTTGAATTACCCCCAGGGACATCACAGGAATaGATGAATGAATGTAGTGCCCGAGTATATGCTCTGTGGTTTTTA +
Preference number: 6 (lower is better)
Translates to: IATRRVELPPGTSQE*MNECSARVYALWFL
Trigger: TAAAAACCACAGAGCATATACTCGGGCACTACATTCATTCATCAATTCCTGTGATGTCCCTGGGGGTAATTCAACTCTTCGAGTCGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344762.6
ENST00000529051.5
ENST00000530061.1
CDS TCA 72 bp CGCTCTTTCTTATCTTCTTCTTTATCCACGTCAGACTaGAATGCCAGTGGAGCTTGGAATTCAGTGCTCAAT +
Preference number: 6 (lower is better)
Translates to: RSFLSSSLSTSD*NASGAWNSVLN
Trigger: ATTGAGCACTGAATTCCAAGCTCCACTGGCATTTCAGTCTGACGTGGATAAAGAAGAAGATAAGAAAGAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CAA 72 bp AGGGGAGTCTTGGTCCTGGATTTTAGGTACAACATATaGATGATAGTCCAGAGGCAATTCTTCTCTCACTCT +
Preference number: 6 (lower is better)
Translates to: RGVLVLDFRYNI*MIVQRQFFSHS
Trigger: AGAGTGAGAGAAGAATTGCCTCTGGACTATCATCAATATGTTGTACCTAAAATCCAGGACCAAGACTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS CAA 72 bp CTTGCAATCTCCCATTTCTCAAAAGATGAGGGTAGTTaGATATGCTTGTTCTGTTCTCTAGGGGAGTCTTGG +
Preference number: 6 (lower is better)
Translates to: LAISHFSKDEGS*ICLFCSLGESW
Trigger: CCAAGACTCCCCTAGAGAACAGAACAAGCATATCAAACTACCCTCATCTTTTGAGAAATGGGAGATTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS TCA 72 bp TGCAGAAGCAAAATTATGAATTGCGACTCGAAGAGTTaGATTACCCCCAGGGACATCACAGGAATTGATGAA +
Preference number: 6 (lower is better)
Translates to: CRSKIMNCDSKS*ITPRDITGIDE
Trigger: TTCATCAATTCCTGTGATGTCCCTGGGGGTAATTCAACTCTTCGAGTCGCAATTCATAATTTTGCTTCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344762.6
ENST00000529051.5
ENST00000530061.1
CDS CAA 90 bp CTTCCAATAGCAACATTCAAATTGTTTGGAAAAACACTTGTCCTTTaGGAAGTTAAGTGTGTTGCTGAAGACTGCATGGCTATGGAGCCT +
Preference number: 6 (lower is better)
Translates to: LPIATFKLFGKTLVL*EVKCVAEDCMAMEP
Trigger: AGGCTCCATAGCCATGCAGTCTTCAGCAACACACTTAACTTCCAAAAGGACAAGTGTTTTTCCAAACAATTTGAATGTTGCTATTGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5
CDS GCA 72 bp CAACAGCATAGTGGAGGTAAAGTAATATTATACAGCTaGATTTTCTCCTGGATTTGGGCTCGTAAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: QQHSGGKVILYS*IFSWIWARKAS
Trigger: AGAAGCTTTACGAGCCCAAATCCAGGAGAAAATGCAGCTGTATAATATTACTTTACCTCCACTATGCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344762.6
ENST00000524471.1
ENST00000529051.5
ENST00000530061.1
CDS GCA 72 bp AATATCCCAAGAATATCCTCAAAAATTTCTGCTGGCTaGTTTATCTCCTCCCAAAGAGAAATGAGCAATGGC +
Preference number: 6 (lower is better)
Translates to: NIPRISSKISAG*FISSQREMSNG
Trigger: GCCATTGCTCATTTCTCTTTGGGAGGAGATAAAGCAGCCAGCAGAAATTTTTGAGGATATTCTTGGGATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524471.1
CDS CCA 72 bp TTCTCAGTGCCTCCTGGCAGAACTAGCAATCTAATGTaGATATATATGGTAATACGTCCATGTTACATACCA +
Preference number: 6 (lower is better)
Translates to: FSVPPGRTSNLM*IYMVIRPCYIP
Trigger: TGGTATGTAACATGGACGTATTACCATATATATCCACATTAGATTGCTAGTTCTGCCAGGAGGCACTGAGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524471.1
CDS CAA 90 bp ATCAGGGAAGGAGGTAACCTAGAACTTCCAATAGCAACATTCAAATaGTTTGGAAAAACACTTGTCCTTTTGGAAGTTAAGTGTGTTGCT +
Preference number: 6 (lower is better)
Translates to: IREGGNLELPIATFK*FGKTLVLLEVKCVA
Trigger: AGCAACACACTTAACTTCCAAAAGGACAAGTGTTTTTCCAAACAATTTGAATGTTGCTATTGGAAGTTCTAGGTTACCTCCTTCCCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344762.6
ENST00000529051.5